Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957860 | G8A101 | 52.222 | 270 | 122 | 1 | 3 | 265 | 4 | 273 | 1.51e-99 | 301 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014330 | Msa0957860 | 0.807395 | 5.162740e-50 | -8.615850e-47 |
| Msa0015750 | Msa0957860 | 0.803234 | 3.842432e-49 | -8.615850e-47 |
| Msa0016570 | Msa0957860 | 0.815786 | 7.734055e-52 | -8.615850e-47 |
| Msa0023610 | Msa0957860 | 0.821297 | 4.351426e-53 | -8.615850e-47 |
| Msa0111510 | Msa0957860 | 0.806229 | 9.102688e-50 | -8.615850e-47 |
| Msa0118060 | Msa0957860 | 0.823316 | 1.478723e-53 | -8.615850e-47 |
| Msa0604350 | Msa0957860 | 0.806381 | 8.458222e-50 | -8.615850e-47 |
| Msa0636170 | Msa0957860 | 0.832457 | 9.350284e-56 | -8.615850e-47 |
| Msa0639610 | Msa0957860 | 0.807673 | 4.505909e-50 | -8.615850e-47 |
| Msa0661870 | Msa0957860 | 0.805432 | 1.338893e-49 | -8.615850e-47 |
| Msa0694370 | Msa0957860 | 0.820619 | 6.232526e-53 | -8.615850e-47 |
| Msa0726140 | Msa0957860 | 0.851592 | 8.026821e-61 | -8.615850e-47 |
| Msa0732540 | Msa0957860 | 0.804597 | 2.000985e-49 | -8.615850e-47 |
| Msa0735080 | Msa0957860 | 0.824633 | 7.262573e-54 | -8.615850e-47 |
| Msa0743810 | Msa0957860 | 0.856509 | 3.067189e-62 | -8.615850e-47 |
| Msa0745060 | Msa0957860 | 0.852670 | 3.964323e-61 | -8.615850e-47 |
| Msa0777870 | Msa0957860 | 0.822183 | 2.715293e-53 | -8.615850e-47 |
| Msa0783160 | Msa0957860 | 0.814823 | 1.266247e-51 | -8.615850e-47 |
| Msa0784290 | Msa0957860 | 0.830667 | 2.581576e-55 | -8.615850e-47 |
| Msa0825860 | Msa0957860 | 0.861844 | 7.709790e-64 | -8.615850e-47 |
| Msa0123810 | Msa0957860 | 0.837413 | 5.275029e-57 | -8.615850e-47 |
| Msa0145750 | Msa0957860 | 0.814664 | 1.373022e-51 | -8.615850e-47 |
| Msa0153200 | Msa0957860 | 0.811803 | 5.830765e-51 | -8.615850e-47 |
| Msa0232850 | Msa0957860 | 0.868169 | 7.973702e-66 | -8.615850e-47 |
| Msa0365500 | Msa0957860 | 0.832240 | 1.058311e-55 | -8.615850e-47 |
| Msa0384800 | Msa0957860 | 0.837990 | 3.751366e-57 | -8.615850e-47 |
| Msa0414420 | Msa0957860 | 0.818133 | 2.297508e-52 | -8.615850e-47 |
| Msa0423020 | Msa0957860 | 0.812250 | 4.660914e-51 | -8.615850e-47 |
| Msa0435230 | Msa0957860 | 0.817755 | 2.796916e-52 | -8.615850e-47 |
| Msa0451730 | Msa0957860 | 0.807568 | 4.743092e-50 | -8.615850e-47 |
| Msa0452900 | Msa0957860 | 0.843830 | 1.100913e-58 | -8.615850e-47 |
| Msa0453120 | Msa0957860 | 0.814807 | 1.276219e-51 | -8.615850e-47 |
| Msa0454910 | Msa0957860 | 0.827325 | 1.665428e-54 | -8.615850e-47 |
| Msa0479340 | Msa0957860 | 0.802884 | 4.539696e-49 | -8.615850e-47 |
| Msa0251320 | Msa0957860 | 0.800878 | 1.172216e-48 | -8.615850e-47 |
| Msa0267000 | Msa0957860 | 0.823719 | 1.190525e-53 | -8.615850e-47 |
| Msa0267010 | Msa0957860 | 0.827172 | 1.812055e-54 | -8.615850e-47 |
| Msa0306460 | Msa0957860 | 0.801005 | 1.104348e-48 | -8.615850e-47 |
| Msa0311750 | Msa0957860 | 0.805979 | 1.027570e-49 | -8.615850e-47 |
| Msa0342240 | Msa0957860 | 0.803083 | 4.128556e-49 | -8.615850e-47 |
| Msa0360510 | Msa0957860 | 0.800947 | 1.134962e-48 | -8.615850e-47 |
| Msa0491590 | Msa0957860 | 0.820301 | 7.374724e-53 | -8.615850e-47 |
| Msa0502760 | Msa0957860 | 0.821837 | 3.264589e-53 | -8.615850e-47 |
| Msa0506270 | Msa0957860 | 0.820640 | 6.165074e-53 | -8.615850e-47 |
| Msa0548060 | Msa0957860 | 0.808284 | 3.340201e-50 | -8.615850e-47 |
| Msa0596150 | Msa0957860 | 0.807827 | 4.179992e-50 | -8.615850e-47 |
| Msa0846210 | Msa0957860 | 0.802289 | 6.020239e-49 | -8.615850e-47 |
| Msa0846330 | Msa0957860 | 0.841763 | 3.901412e-58 | -8.615850e-47 |
| Msa0846350 | Msa0957860 | 0.833162 | 6.247491e-56 | -8.615850e-47 |
| Msa0854980 | Msa0957860 | 0.834575 | 2.769097e-56 | -8.615850e-47 |
| Msa0865320 | Msa0957860 | 0.847243 | 1.308317e-59 | -8.615850e-47 |
| Msa0885290 | Msa0957860 | 0.802175 | 6.356111e-49 | -8.615850e-47 |
| Msa0888370 | Msa0957860 | 0.808942 | 2.417178e-50 | -8.615850e-47 |
| Msa0898380 | Msa0957860 | 0.827634 | 1.403850e-54 | -8.615850e-47 |
| Msa0907260 | Msa0957860 | 0.801810 | 7.552044e-49 | -8.615850e-47 |
| Msa0954910 | Msa0957860 | 0.821438 | 4.036909e-53 | -8.615850e-47 |
| Msa0956270 | Msa0957860 | 0.805146 | 1.536826e-49 | -8.615850e-47 |
| Msa0957860 | Msa0957960 | 0.999721 | 0.000000e+00 | -8.615850e-47 |
| Msa0957860 | Msa0979410 | 0.821192 | 4.602013e-53 | -8.615850e-47 |
| Msa0957860 | Msa0986360 | 0.814567 | 1.442770e-51 | -8.615850e-47 |
| Msa0957860 | Msa0989060 | 0.857713 | 1.352677e-62 | -8.615850e-47 |
| Msa0957860 | Msa1002310 | 0.826086 | 3.289771e-54 | -8.615850e-47 |
| Msa0957860 | Msa1016280 | 0.828519 | 8.593798e-55 | -8.615850e-47 |
| Msa0957860 | Msa1024240 | 0.810279 | 1.247453e-50 | -8.615850e-47 |
| Msa0957860 | Msa1025360 | 0.832953 | 7.043384e-56 | -8.615850e-47 |
| Msa0957860 | Msa1025370 | 0.832993 | 6.883979e-56 | -8.615850e-47 |
| Msa0957860 | Msa1044830 | 0.829647 | 4.578552e-55 | -8.615850e-47 |
| Msa0957860 | Msa1044840 | 0.834737 | 2.520848e-56 | -8.615850e-47 |
| Msa0957860 | Msa1054790 | 0.805613 | 1.226745e-49 | -8.615850e-47 |
| Msa0957860 | Msa1092990 | 0.877803 | 4.689043e-69 | -8.615850e-47 |
| Msa0957860 | Msa1100980 | 0.858744 | 6.674938e-63 | -8.615850e-47 |
| Msa0957860 | Msa1109440 | 0.806042 | 9.969503e-50 | -8.615850e-47 |
| Msa0957860 | Msa1135740 | 0.839453 | 1.570518e-57 | -8.615850e-47 |
| Msa0957860 | Msa1136090 | 0.833081 | 6.546581e-56 | -8.615850e-47 |
| Msa0957860 | Msa1137690 | 0.804831 | 1.788044e-49 | -8.615850e-47 |
| Msa0957860 | Msa1146110 | 0.810324 | 1.219819e-50 | -8.615850e-47 |
| Msa0957860 | Msa1173920 | 0.805547 | 1.266379e-49 | -8.615850e-47 |
| Msa0957860 | Msa1178340 | 0.807791 | 4.253437e-50 | -8.615850e-47 |
| Msa0957860 | Msa1182090 | 0.821462 | 3.986458e-53 | -8.615850e-47 |
| Msa0957860 | Msa1187940 | 0.821915 | 3.132368e-53 | -8.615850e-47 |
| Msa0957860 | Msa1187950 | 0.863829 | 1.882228e-64 | -8.615850e-47 |
| Msa0957860 | Msa1192640 | 0.805601 | 1.233949e-49 | -8.615850e-47 |
| Msa0957860 | Msa1246880 | 0.833735 | 4.495002e-56 | -8.615850e-47 |
| Msa0957860 | Msa1269670 | 0.854173 | 1.467874e-61 | -8.615850e-47 |
| Msa0957860 | Msa1270230 | 0.823722 | 1.188893e-53 | -8.615850e-47 |
| Msa0957860 | Msa1270240 | 0.849625 | 2.867680e-60 | -8.615850e-47 |
| Msa0957860 | Msa1270270 | 0.834269 | 3.305477e-56 | -8.615850e-47 |
| Msa0957860 | Msa1273230 | 0.834497 | 2.896072e-56 | -8.615850e-47 |
| Msa0957860 | Msa1276040 | 0.810511 | 1.111782e-50 | -8.615850e-47 |
| Msa0957860 | Msa1283330 | 0.860252 | 2.351164e-63 | -8.615850e-47 |
| Msa0957860 | Msa1285930 | 0.827402 | 1.595490e-54 | -8.615850e-47 |
| Msa0957860 | Msa1287800 | 0.825136 | 5.525995e-54 | -8.615850e-47 |
| Msa0957860 | Msa1287810 | 0.834635 | 2.674513e-56 | -8.615850e-47 |
| Msa0957860 | Msa1297210 | 0.808354 | 3.228110e-50 | -8.615850e-47 |
| Msa0957860 | Msa1314280 | 0.800568 | 1.355757e-48 | -8.615850e-47 |
| Msa0957860 | Msa1340590 | 0.804243 | 2.371996e-49 | -8.615850e-47 |
| Msa0957860 | Msa1342200 | 0.804431 | 2.167951e-49 | -8.615850e-47 |
| Msa0957860 | Msa1369430 | 0.809467 | 1.865369e-50 | -8.615850e-47 |
| Msa0957860 | Msa1386330 | 0.943014 | 2.577029e-102 | -8.615850e-47 |
| Msa0957860 | Msa1397580 | 0.804404 | 2.195249e-49 | -8.615850e-47 |
| Msa0957860 | Msa1402790 | 0.812463 | 4.186131e-51 | -8.615850e-47 |
| Msa0957860 | Msa1404000 | 0.865751 | 4.705194e-65 | -8.615850e-47 |
| Msa0957860 | Msa1415310 | 0.824097 | 9.706612e-54 | -8.615850e-47 |
| Msa0957860 | Msa1422180 | 0.843796 | 1.123866e-58 | -8.615850e-47 |
| Msa0957860 | Msa1433120 | 0.825789 | 3.870356e-54 | -8.615850e-47 |
| Msa0957860 | Msa1463140 | 0.824669 | 7.119645e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957860 | MtrunA17_Chr1g0206471 | 52.222 | 270 | 122 | 1 | 3 | 265 | 4 | 273 | 2.90e-103 | 301 |
| Msa0957860 | MtrunA17_Chr7g0270401 | 47.985 | 273 | 135 | 1 | 1 | 266 | 1 | 273 | 7.14e-93 | 275 |
| Msa0957860 | MtrunA17_Chr1g0193281 | 40.722 | 194 | 88 | 3 | 1 | 180 | 1 | 181 | 1.53e-44 | 149 |
| Msa0957860 | MtrunA17_Chr7g0228461 | 55.556 | 117 | 51 | 1 | 46 | 161 | 1 | 117 | 4.74e-39 | 134 |
| Msa0957860 | MtrunA17_Chr1g0207921 | 48.077 | 104 | 45 | 1 | 16 | 110 | 13 | 116 | 1.57e-28 | 107 |
| Msa0957860 | MtrunA17_Chr1g0207921 | 34.821 | 112 | 68 | 1 | 158 | 264 | 86 | 197 | 2.02e-15 | 72.8 |
| Msa0957860 | MtrunA17_Chr8g0359311 | 54.762 | 84 | 38 | 0 | 183 | 266 | 17 | 100 | 5.00e-28 | 103 |
| Msa0957860 | MtrunA17_Chr3g0123031 | 45.370 | 108 | 41 | 2 | 158 | 265 | 1 | 90 | 1.30e-24 | 94.4 |
| Msa0957860 | MtrunA17_Chr7g0234161 | 46.392 | 97 | 52 | 0 | 134 | 230 | 27 | 123 | 4.20e-22 | 88.6 |
| Msa0957860 | MtrunA17_Chr6g0473661 | 27.723 | 202 | 131 | 3 | 47 | 246 | 259 | 447 | 1.88e-20 | 90.5 |
| Msa0957860 | MtrunA17_Chr8g0361581 | 40.000 | 85 | 44 | 1 | 1 | 78 | 1 | 85 | 5.52e-17 | 76.3 |
| Msa0957860 | MtrunA17_Chr8g0361581 | 38.272 | 81 | 50 | 0 | 184 | 264 | 88 | 168 | 1.83e-15 | 72.4 |
| Msa0957860 | MtrunA17_Chr7g0237161 | 40.741 | 81 | 48 | 0 | 166 | 246 | 3 | 83 | 2.12e-15 | 69.7 |
| Msa0957860 | MtrunA17_Chr5g0421721 | 39.130 | 92 | 49 | 1 | 1 | 85 | 1 | 92 | 2.86e-14 | 67.0 |
| Msa0957860 | MtrunA17_Chr5g0423431 | 37.179 | 78 | 42 | 1 | 1 | 71 | 1 | 78 | 1.77e-13 | 64.3 |
| Msa0957860 | MtrunA17_Chr1g0178231 | 37.179 | 78 | 49 | 0 | 184 | 261 | 17 | 94 | 1.05e-12 | 63.9 |
| Msa0957860 | MtrunA17_Chr6g0456161 | 55.102 | 49 | 22 | 0 | 203 | 251 | 1 | 49 | 1.75e-12 | 60.8 |
| Msa0957860 | MtrunA17_Chr6g0473651 | 27.389 | 157 | 95 | 3 | 97 | 246 | 18 | 162 | 2.95e-12 | 65.9 |
| Msa0957860 | MtrunA17_Chr1g0151111 | 36.709 | 79 | 50 | 0 | 183 | 261 | 17 | 95 | 6.69e-12 | 62.4 |
| Msa0957860 | MtrunA17_Chr4g0054601 | 32.468 | 77 | 52 | 0 | 65 | 141 | 9 | 85 | 8.69e-12 | 60.8 |
| Msa0957860 | MtrunA17_Chr4g0004891 | 70.270 | 37 | 11 | 0 | 45 | 81 | 2 | 38 | 3.50e-11 | 57.4 |
| Msa0957860 | MtrunA17_Chr2g0314281 | 57.447 | 47 | 20 | 0 | 205 | 251 | 367 | 413 | 9.60e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATACTTCGAAGGAATTA+TGG | 0.223973 | 6_3:+70205548 | None:intergenic |
| GTTGCGGTTTAGGACGTTTA+TGG | 0.225713 | 6_3:-70205754 | Msa0957860:intron |
| TTGATGAATGTGGTTGTATA+TGG | 0.268575 | 6_3:-70205059 | Msa0957860:CDS |
| ACCAAAGTCGTAAGCAAAAT+TGG | 0.280462 | 6_3:+70205609 | None:intergenic |
| ATGCAGGATTTGGCTCATAT+TGG | 0.281266 | 6_3:-70205129 | Msa0957860:intron |
| GACTTTGTAGAGATCGATTC+TGG | 0.282449 | 6_3:-70205238 | Msa0957860:CDS |
| ACATTAGTATTTGTTGGAAA+TGG | 0.291674 | 6_3:-70205439 | Msa0957860:CDS |
| ACAGGCTAAAGTTGCGGTTT+AGG | 0.323474 | 6_3:-70205764 | Msa0957860:CDS |
| TCAATATCCGTGTCAGAAAT+AGG | 0.332599 | 6_3:-70205411 | Msa0957860:CDS |
| TGGATAACATTAGTATTTGT+TGG | 0.352039 | 6_3:-70205445 | Msa0957860:CDS |
| CATTAGTATTTGTTGGAAAT+GGG | 0.358285 | 6_3:-70205438 | Msa0957860:CDS |
| TGCAGGATTTGGCTCATATT+GGG | 0.361232 | 6_3:-70205128 | Msa0957860:intron |
| GGTCAAGGCTAGAAGGTTAA+AGG | 0.364042 | 6_3:-70204968 | Msa0957860:CDS |
| TTCTCATTGACACCGATATA+TGG | 0.377396 | 6_3:+70204919 | None:intergenic |
| CCATAATTCCTTCGAAGTAT+TGG | 0.379208 | 6_3:-70205548 | Msa0957860:CDS |
| GACGGTGACAGTGTCGTTAT+CGG | 0.398058 | 6_3:-70204946 | Msa0957860:CDS |
| CTCCTTTCCATTTCACCCAC+AGG | 0.398454 | 6_3:+70205792 | None:intergenic |
| TGCACAAATGGCACAGGAAA+AGG | 0.399613 | 6_3:+70205301 | None:intergenic |
| CTCGCACACAATCTTCTTGC+TGG | 0.401085 | 6_3:-70205933 | Msa0957860:intron |
| GTTATCGGTGCTCCATATAT+CGG | 0.401878 | 6_3:-70204931 | Msa0957860:CDS |
| CCTCATGCTCACTTTAAGAT+TGG | 0.409855 | 6_3:-70205009 | Msa0957860:CDS |
| AGATTGGCGGTGGCTGGAAC+AGG | 0.416190 | 6_3:-70204993 | Msa0957860:CDS |
| ACTTTAAGATTGGCGGTGGC+TGG | 0.418939 | 6_3:-70204999 | Msa0957860:CDS |
| TGAAACTGAGAATCTGAGTT+TGG | 0.418987 | 6_3:-70205082 | Msa0957860:CDS |
| ACATAATCCTGTGGGTGAAA+TGG | 0.425158 | 6_3:-70205799 | Msa0957860:CDS |
| TTAAATTCATTATGCACAAA+TGG | 0.431684 | 6_3:+70205289 | None:intergenic |
| AGAGATCGATTCTGGAATCT+TGG | 0.440229 | 6_3:-70205230 | Msa0957860:intron |
| CATGAGGGCGTGTAACAAAC+TGG | 0.441451 | 6_3:+70205025 | None:intergenic |
| ACAGGATGGTCAAGGCTAGA+AGG | 0.443921 | 6_3:-70204975 | Msa0957860:CDS |
| ACGCAATGCAAGCCAGCCTT+TGG | 0.460560 | 6_3:+70205495 | None:intergenic |
| ACTTTGGTGATAGTGTTGAT+AGG | 0.462057 | 6_3:-70205594 | Msa0957860:CDS |
| CATGCTCACTTTAAGATTGG+CGG | 0.482279 | 6_3:-70205006 | Msa0957860:CDS |
| CTGAGTTTGGTTGATGAATG+TGG | 0.483514 | 6_3:-70205069 | Msa0957860:CDS |
| ACCCACAGGATTATGTATCA+AGG | 0.484056 | 6_3:+70205806 | None:intergenic |
| TGATGAATGTGGTTGTATAT+GGG | 0.484155 | 6_3:-70205058 | Msa0957860:CDS |
| TCAGAAATAGGTTGGGTAAG+AGG | 0.500139 | 6_3:-70205399 | Msa0957860:CDS |
| TTGCATAGGAGGTGTGAACC+TGG | 0.509205 | 6_3:+70205366 | None:intergenic |
| TATCCGTGTCAGAAATAGGT+TGG | 0.517230 | 6_3:-70205407 | Msa0957860:CDS |
| AAATGGAAAGGAGAGCCAAC+AGG | 0.528770 | 6_3:-70205782 | Msa0957860:CDS |
| ATCCGTGTCAGAAATAGGTT+GGG | 0.528825 | 6_3:-70205406 | Msa0957860:CDS |
| GACTTGTATAACGCATCACT+TGG | 0.536646 | 6_3:-70205472 | Msa0957860:CDS |
| AAACCGCAACTTTAGCCTGT+TGG | 0.558470 | 6_3:+70205767 | None:intergenic |
| ATCCTGTGGGTGAAATGGAA+AGG | 0.566847 | 6_3:-70205794 | Msa0957860:CDS |
| GCTCACTTTAAGATTGGCGG+TGG | 0.568885 | 6_3:-70205003 | Msa0957860:CDS |
| AAGAAGATTGTGTGCGAGCA+TGG | 0.571428 | 6_3:+70205938 | None:intergenic |
| TCTCTCTACCAATACTTCGA+AGG | 0.574251 | 6_3:+70205540 | None:intergenic |
| CCAATCTTAAAGTGAGCATG+AGG | 0.578221 | 6_3:+70205009 | None:intergenic |
| ATTGGTAGAGAGAAACAACC+AGG | 0.580535 | 6_3:-70205530 | Msa0957860:CDS |
| ATAACGCATCACTTGGTGCA+TGG | 0.587916 | 6_3:-70205465 | Msa0957860:CDS |
| CTCTCAACAGCGAATTGCAT+AGG | 0.590485 | 6_3:+70205352 | None:intergenic |
| TAGTATTTGTTGGAAATGGG+AGG | 0.592775 | 6_3:-70205435 | Msa0957860:CDS |
| ACCCTTGATACATAATCCTG+TGG | 0.598049 | 6_3:-70205808 | Msa0957860:CDS |
| CCCACAGGATTATGTATCAA+GGG | 0.598540 | 6_3:+70205807 | None:intergenic |
| TCATTATGCACAAATGGCAC+AGG | 0.601819 | 6_3:+70205295 | None:intergenic |
| CTATGCAATTCGCTGTTGAG+AGG | 0.602851 | 6_3:-70205351 | Msa0957860:CDS |
| TGCATAGGAGGTGTGAACCT+GGG | 0.603224 | 6_3:+70205367 | None:intergenic |
| GAGCCAACAGGCTAAAGTTG+CGG | 0.603827 | 6_3:-70205770 | Msa0957860:CDS |
| TACCCAACCTATTTCTGACA+CGG | 0.609870 | 6_3:+70205404 | None:intergenic |
| TCAACAGCGAATTGCATAGG+AGG | 0.614378 | 6_3:+70205355 | None:intergenic |
| TGTTGATAGGTATGCTACAT+TGG | 0.616810 | 6_3:-70205581 | Msa0957860:CDS |
| CCCTTGATACATAATCCTGT+GGG | 0.621495 | 6_3:-70205807 | Msa0957860:CDS |
| GTAAGAGGATACGATGTCCC+AGG | 0.623787 | 6_3:-70205384 | Msa0957860:CDS |
| AAGTCGTAAGCAAAATTGGT+TGG | 0.627128 | 6_3:+70205613 | None:intergenic |
| TGGCGGTGGCTGGAACAGGA+TGG | 0.649155 | 6_3:-70204989 | Msa0957860:CDS |
| TGATAGGTATGCTACATTGG+TGG | 0.670079 | 6_3:-70205578 | Msa0957860:CDS |
| TGGCTGGAACAGGATGGTCA+AGG | 0.676417 | 6_3:-70204983 | Msa0957860:CDS |
| AGGGCGTGTAACAAACTGGA+GGG | 0.676724 | 6_3:+70205029 | None:intergenic |
| CAATCTTAAAGTGAGCATGA+GGG | 0.680650 | 6_3:+70205010 | None:intergenic |
| AAGGCTAGAAGGTTAAAGGA+CGG | 0.693112 | 6_3:-70204964 | Msa0957860:CDS |
| GAGGGCGTGTAACAAACTGG+AGG | 0.699235 | 6_3:+70205028 | None:intergenic |
| TTGGTAGAGAGAAACAACCA+GGG | 0.738238 | 6_3:-70205529 | Msa0957860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATCAAAAATACATGTAA+GGG | + | chr6_3:70204983-70205002 | None:intergenic | 15.0% |
| !! | TAAATCAAAAATACATGTAA+GGG | + | chr6_3:70204983-70205002 | None:intergenic | 15.0% |
| !! | AAATCAAAAATACATGTAAG+GGG | + | chr6_3:70204982-70205001 | None:intergenic | 20.0% |
| !! | CTAAATCAAAAATACATGTA+AGG | + | chr6_3:70204984-70205003 | None:intergenic | 20.0% |
| !! | TTAAATTCATTATGCACAAA+TGG | + | chr6_3:70205565-70205584 | None:intergenic | 20.0% |
| !!! | TGTTAAAAAAGATATTGACT+TGG | - | chr6_3:70205655-70205674 | Msa0957860:intron | 20.0% |
| !!! | ATATGATGTTTTAATTATGC+AGG | - | chr6_3:70205706-70205725 | Msa0957860:intron | 20.0% |
| !! | AAATCAAAAATACATGTAAG+GGG | + | chr6_3:70204982-70205001 | None:intergenic | 20.0% |
| !! | CTAAATCAAAAATACATGTA+AGG | + | chr6_3:70204984-70205003 | None:intergenic | 20.0% |
| !! | TTAAATTCATTATGCACAAA+TGG | + | chr6_3:70205565-70205584 | None:intergenic | 20.0% |
| !!! | TGTTAAAAAAGATATTGACT+TGG | - | chr6_3:70205655-70205674 | Msa0957860:intron | 20.0% |
| !!! | ATATGATGTTTTAATTATGC+AGG | - | chr6_3:70205706-70205725 | Msa0957860:intron | 20.0% |
| ! | AATCAAAAATACATGTAAGG+GGG | + | chr6_3:70204981-70205000 | None:intergenic | 25.0% |
| ! | AATGACATACATATTAGATG+AGG | + | chr6_3:70205008-70205027 | None:intergenic | 25.0% |
| !!! | ACACATTTTTTTATGTTGCA+GGG | - | chr6_3:70205202-70205221 | Msa0957860:intron | 25.0% |
| ! | TGGATAACATTAGTATTTGT+TGG | - | chr6_3:70205406-70205425 | Msa0957860:CDS | 25.0% |
| !! | ACATTAGTATTTGTTGGAAA+TGG | - | chr6_3:70205412-70205431 | Msa0957860:CDS | 25.0% |
| !! | CATTAGTATTTGTTGGAAAT+GGG | - | chr6_3:70205413-70205432 | Msa0957860:CDS | 25.0% |
| !!! | TGTTTTAATTATGCAGGATT+TGG | - | chr6_3:70205712-70205731 | Msa0957860:intron | 25.0% |
| ! | AATCAAAAATACATGTAAGG+GGG | + | chr6_3:70204981-70205000 | None:intergenic | 25.0% |
| ! | AATGACATACATATTAGATG+AGG | + | chr6_3:70205008-70205027 | None:intergenic | 25.0% |
| !!! | ACACATTTTTTTATGTTGCA+GGG | - | chr6_3:70205202-70205221 | Msa0957860:intron | 25.0% |
| ! | TGGATAACATTAGTATTTGT+TGG | - | chr6_3:70205406-70205425 | Msa0957860:CDS | 25.0% |
| !! | ACATTAGTATTTGTTGGAAA+TGG | - | chr6_3:70205412-70205431 | Msa0957860:CDS | 25.0% |
| !! | CATTAGTATTTGTTGGAAAT+GGG | - | chr6_3:70205413-70205432 | Msa0957860:CDS | 25.0% |
| !!! | TGTTTTAATTATGCAGGATT+TGG | - | chr6_3:70205712-70205731 | Msa0957860:intron | 25.0% |
| !!! | CACACATTTTTTTATGTTGC+AGG | - | chr6_3:70205201-70205220 | Msa0957860:intron | 30.0% |
| TTGATGAATGTGGTTGTATA+TGG | - | chr6_3:70205792-70205811 | Msa0957860:CDS | 30.0% | |
| TGATGAATGTGGTTGTATAT+GGG | - | chr6_3:70205793-70205812 | Msa0957860:CDS | 30.0% | |
| !!! | CACACATTTTTTTATGTTGC+AGG | - | chr6_3:70205201-70205220 | Msa0957860:intron | 30.0% |
| TTGATGAATGTGGTTGTATA+TGG | - | chr6_3:70205792-70205811 | Msa0957860:CDS | 30.0% | |
| TGATGAATGTGGTTGTATAT+GGG | - | chr6_3:70205793-70205812 | Msa0957860:CDS | 30.0% | |
| ! | ATGTCATTGTTGTTCAATCC+AGG | - | chr6_3:70205020-70205039 | Msa0957860:CDS | 35.0% |
| ! | ACCTGCTTAATCAACGTTTT+AGG | - | chr6_3:70205169-70205188 | Msa0957860:intron | 35.0% |
| ! | ACCTAAAACGTTGATTAAGC+AGG | + | chr6_3:70205173-70205192 | None:intergenic | 35.0% |
| AAGTCGTAAGCAAAATTGGT+TGG | + | chr6_3:70205241-70205260 | None:intergenic | 35.0% | |
| ! | ACCAATTTTGCTTACGACTT+TGG | - | chr6_3:70205241-70205260 | Msa0957860:CDS | 35.0% |
| ACCAAAGTCGTAAGCAAAAT+TGG | + | chr6_3:70205245-70205264 | None:intergenic | 35.0% | |
| !! | ACTTTGGTGATAGTGTTGAT+AGG | - | chr6_3:70205257-70205276 | Msa0957860:CDS | 35.0% |
| ! | TGTTGATAGGTATGCTACAT+TGG | - | chr6_3:70205270-70205289 | Msa0957860:CDS | 35.0% |
| CCAATACTTCGAAGGAATTA+TGG | + | chr6_3:70205306-70205325 | None:intergenic | 35.0% | |
| CCATAATTCCTTCGAAGTAT+TGG | - | chr6_3:70205303-70205322 | Msa0957860:CDS | 35.0% | |
| CTTTGGTGAAAAATATTCCC+TGG | + | chr6_3:70205342-70205361 | None:intergenic | 35.0% | |
| ! | CAGGGAATATTTTTCACCAA+AGG | - | chr6_3:70205340-70205359 | Msa0957860:CDS | 35.0% |
| ! | GAATATTTTTCACCAAAGGC+TGG | - | chr6_3:70205344-70205363 | Msa0957860:CDS | 35.0% |
| ! | TAGTATTTGTTGGAAATGGG+AGG | - | chr6_3:70205416-70205435 | Msa0957860:CDS | 35.0% |
| TCAATATCCGTGTCAGAAAT+AGG | - | chr6_3:70205440-70205459 | Msa0957860:CDS | 35.0% | |
| TGAAACTGAGAATCTGAGTT+TGG | - | chr6_3:70205769-70205788 | Msa0957860:CDS | 35.0% | |
| CAATCTTAAAGTGAGCATGA+GGG | + | chr6_3:70205844-70205863 | None:intergenic | 35.0% | |
| TTCTCATTGACACCGATATA+TGG | + | chr6_3:70205935-70205954 | None:intergenic | 35.0% | |
| ! | ATGTCATTGTTGTTCAATCC+AGG | - | chr6_3:70205020-70205039 | Msa0957860:CDS | 35.0% |
| ! | ACCTGCTTAATCAACGTTTT+AGG | - | chr6_3:70205169-70205188 | Msa0957860:intron | 35.0% |
| ! | ACCTAAAACGTTGATTAAGC+AGG | + | chr6_3:70205173-70205192 | None:intergenic | 35.0% |
| AAGTCGTAAGCAAAATTGGT+TGG | + | chr6_3:70205241-70205260 | None:intergenic | 35.0% | |
| ! | ACCAATTTTGCTTACGACTT+TGG | - | chr6_3:70205241-70205260 | Msa0957860:CDS | 35.0% |
| ACCAAAGTCGTAAGCAAAAT+TGG | + | chr6_3:70205245-70205264 | None:intergenic | 35.0% | |
| !! | ACTTTGGTGATAGTGTTGAT+AGG | - | chr6_3:70205257-70205276 | Msa0957860:CDS | 35.0% |
| ! | TGTTGATAGGTATGCTACAT+TGG | - | chr6_3:70205270-70205289 | Msa0957860:CDS | 35.0% |
| CCAATACTTCGAAGGAATTA+TGG | + | chr6_3:70205306-70205325 | None:intergenic | 35.0% | |
| CCATAATTCCTTCGAAGTAT+TGG | - | chr6_3:70205303-70205322 | Msa0957860:CDS | 35.0% | |
| CTTTGGTGAAAAATATTCCC+TGG | + | chr6_3:70205342-70205361 | None:intergenic | 35.0% | |
| ! | CAGGGAATATTTTTCACCAA+AGG | - | chr6_3:70205340-70205359 | Msa0957860:CDS | 35.0% |
| ! | GAATATTTTTCACCAAAGGC+TGG | - | chr6_3:70205344-70205363 | Msa0957860:CDS | 35.0% |
| ! | TAGTATTTGTTGGAAATGGG+AGG | - | chr6_3:70205416-70205435 | Msa0957860:CDS | 35.0% |
| TCAATATCCGTGTCAGAAAT+AGG | - | chr6_3:70205440-70205459 | Msa0957860:CDS | 35.0% | |
| TGAAACTGAGAATCTGAGTT+TGG | - | chr6_3:70205769-70205788 | Msa0957860:CDS | 35.0% | |
| CAATCTTAAAGTGAGCATGA+GGG | + | chr6_3:70205844-70205863 | None:intergenic | 35.0% | |
| TTCTCATTGACACCGATATA+TGG | + | chr6_3:70205935-70205954 | None:intergenic | 35.0% | |
| ACCCTTGATACATAATCCTG+TGG | - | chr6_3:70205043-70205062 | Msa0957860:CDS | 40.0% | |
| CCCACAGGATTATGTATCAA+GGG | + | chr6_3:70205047-70205066 | None:intergenic | 40.0% | |
| CCCTTGATACATAATCCTGT+GGG | - | chr6_3:70205044-70205063 | Msa0957860:CDS | 40.0% | |
| ACCCACAGGATTATGTATCA+AGG | + | chr6_3:70205048-70205067 | None:intergenic | 40.0% | |
| ACATAATCCTGTGGGTGAAA+TGG | - | chr6_3:70205052-70205071 | Msa0957860:CDS | 40.0% | |
| TGATAGGTATGCTACATTGG+TGG | - | chr6_3:70205273-70205292 | Msa0957860:CDS | 40.0% | |
| TCTCTCTACCAATACTTCGA+AGG | + | chr6_3:70205314-70205333 | None:intergenic | 40.0% | |
| ATTGGTAGAGAGAAACAACC+AGG | - | chr6_3:70205321-70205340 | Msa0957860:CDS | 40.0% | |
| TTGGTAGAGAGAAACAACCA+GGG | - | chr6_3:70205322-70205341 | Msa0957860:CDS | 40.0% | |
| GACTTGTATAACGCATCACT+TGG | - | chr6_3:70205379-70205398 | Msa0957860:CDS | 40.0% | |
| TATCCGTGTCAGAAATAGGT+TGG | - | chr6_3:70205444-70205463 | Msa0957860:CDS | 40.0% | |
| ATCCGTGTCAGAAATAGGTT+GGG | - | chr6_3:70205445-70205464 | Msa0957860:CDS | 40.0% | |
| !! | TACCCAACCTATTTCTGACA+CGG | + | chr6_3:70205450-70205469 | None:intergenic | 40.0% |
| ! | TCAGAAATAGGTTGGGTAAG+AGG | - | chr6_3:70205452-70205471 | Msa0957860:CDS | 40.0% |
| TCATTATGCACAAATGGCAC+AGG | + | chr6_3:70205559-70205578 | None:intergenic | 40.0% | |
| ! | GACTTTGTAGAGATCGATTC+TGG | - | chr6_3:70205613-70205632 | Msa0957860:CDS | 40.0% |
| !! | AGAGATCGATTCTGGAATCT+TGG | - | chr6_3:70205621-70205640 | Msa0957860:CDS | 40.0% |
| ! | ATGCAGGATTTGGCTCATAT+TGG | - | chr6_3:70205722-70205741 | Msa0957860:intron | 40.0% |
| ! | TGCAGGATTTGGCTCATATT+GGG | - | chr6_3:70205723-70205742 | Msa0957860:intron | 40.0% |
| !! | CTGAGTTTGGTTGATGAATG+TGG | - | chr6_3:70205782-70205801 | Msa0957860:CDS | 40.0% |
| CCAATCTTAAAGTGAGCATG+AGG | + | chr6_3:70205845-70205864 | None:intergenic | 40.0% | |
| !! | CCTCATGCTCACTTTAAGAT+TGG | - | chr6_3:70205842-70205861 | Msa0957860:intron | 40.0% |
| !! | CATGCTCACTTTAAGATTGG+CGG | - | chr6_3:70205845-70205864 | Msa0957860:intron | 40.0% |
| AAGGCTAGAAGGTTAAAGGA+CGG | - | chr6_3:70205887-70205906 | Msa0957860:intron | 40.0% | |
| ! | GTTATCGGTGCTCCATATAT+CGG | - | chr6_3:70205920-70205939 | Msa0957860:intron | 40.0% |
| ACCCTTGATACATAATCCTG+TGG | - | chr6_3:70205043-70205062 | Msa0957860:CDS | 40.0% | |
| CCCACAGGATTATGTATCAA+GGG | + | chr6_3:70205047-70205066 | None:intergenic | 40.0% | |
| CCCTTGATACATAATCCTGT+GGG | - | chr6_3:70205044-70205063 | Msa0957860:CDS | 40.0% | |
| ACCCACAGGATTATGTATCA+AGG | + | chr6_3:70205048-70205067 | None:intergenic | 40.0% | |
| ACATAATCCTGTGGGTGAAA+TGG | - | chr6_3:70205052-70205071 | Msa0957860:CDS | 40.0% | |
| TGATAGGTATGCTACATTGG+TGG | - | chr6_3:70205273-70205292 | Msa0957860:CDS | 40.0% | |
| TCTCTCTACCAATACTTCGA+AGG | + | chr6_3:70205314-70205333 | None:intergenic | 40.0% | |
| ATTGGTAGAGAGAAACAACC+AGG | - | chr6_3:70205321-70205340 | Msa0957860:CDS | 40.0% | |
| TTGGTAGAGAGAAACAACCA+GGG | - | chr6_3:70205322-70205341 | Msa0957860:CDS | 40.0% | |
| GACTTGTATAACGCATCACT+TGG | - | chr6_3:70205379-70205398 | Msa0957860:CDS | 40.0% | |
| TATCCGTGTCAGAAATAGGT+TGG | - | chr6_3:70205444-70205463 | Msa0957860:CDS | 40.0% | |
| ATCCGTGTCAGAAATAGGTT+GGG | - | chr6_3:70205445-70205464 | Msa0957860:CDS | 40.0% | |
| !! | TACCCAACCTATTTCTGACA+CGG | + | chr6_3:70205450-70205469 | None:intergenic | 40.0% |
| ! | TCAGAAATAGGTTGGGTAAG+AGG | - | chr6_3:70205452-70205471 | Msa0957860:CDS | 40.0% |
| TCATTATGCACAAATGGCAC+AGG | + | chr6_3:70205559-70205578 | None:intergenic | 40.0% | |
| ! | GACTTTGTAGAGATCGATTC+TGG | - | chr6_3:70205613-70205632 | Msa0957860:CDS | 40.0% |
| !! | AGAGATCGATTCTGGAATCT+TGG | - | chr6_3:70205621-70205640 | Msa0957860:CDS | 40.0% |
| ! | ATGCAGGATTTGGCTCATAT+TGG | - | chr6_3:70205722-70205741 | Msa0957860:intron | 40.0% |
| ! | TGCAGGATTTGGCTCATATT+GGG | - | chr6_3:70205723-70205742 | Msa0957860:intron | 40.0% |
| !! | CTGAGTTTGGTTGATGAATG+TGG | - | chr6_3:70205782-70205801 | Msa0957860:CDS | 40.0% |
| CCAATCTTAAAGTGAGCATG+AGG | + | chr6_3:70205845-70205864 | None:intergenic | 40.0% | |
| !! | CCTCATGCTCACTTTAAGAT+TGG | - | chr6_3:70205842-70205861 | Msa0957860:intron | 40.0% |
| !! | CATGCTCACTTTAAGATTGG+CGG | - | chr6_3:70205845-70205864 | Msa0957860:intron | 40.0% |
| AAGGCTAGAAGGTTAAAGGA+CGG | - | chr6_3:70205887-70205906 | Msa0957860:intron | 40.0% | |
| ! | GTTATCGGTGCTCCATATAT+CGG | - | chr6_3:70205920-70205939 | Msa0957860:intron | 40.0% |
| AAGAAGATTGTGTGCGAGCA+TGG | + | chr6_3:70204916-70204935 | None:intergenic | 45.0% | |
| GGATTATGTATCAAGGGTCC+TGG | + | chr6_3:70205041-70205060 | None:intergenic | 45.0% | |
| ATCCTGTGGGTGAAATGGAA+AGG | - | chr6_3:70205057-70205076 | Msa0957860:CDS | 45.0% | |
| AAATGGAAAGGAGAGCCAAC+AGG | - | chr6_3:70205069-70205088 | Msa0957860:CDS | 45.0% | |
| AAACCGCAACTTTAGCCTGT+TGG | + | chr6_3:70205087-70205106 | None:intergenic | 45.0% | |
| ACAGGCTAAAGTTGCGGTTT+AGG | - | chr6_3:70205087-70205106 | Msa0957860:CDS | 45.0% | |
| ! | GTTGCGGTTTAGGACGTTTA+TGG | - | chr6_3:70205097-70205116 | Msa0957860:CDS | 45.0% |
| !! | ATAACGCATCACTTGGTGCA+TGG | - | chr6_3:70205386-70205405 | Msa0957860:CDS | 45.0% |
| TCAACAGCGAATTGCATAGG+AGG | + | chr6_3:70205499-70205518 | None:intergenic | 45.0% | |
| CTCTCAACAGCGAATTGCAT+AGG | + | chr6_3:70205502-70205521 | None:intergenic | 45.0% | |
| CTATGCAATTCGCTGTTGAG+AGG | - | chr6_3:70205500-70205519 | Msa0957860:CDS | 45.0% | |
| TGCACAAATGGCACAGGAAA+AGG | + | chr6_3:70205553-70205572 | None:intergenic | 45.0% | |
| GGTCAAGGCTAGAAGGTTAA+AGG | - | chr6_3:70205883-70205902 | Msa0957860:intron | 45.0% | |
| AAGAAGATTGTGTGCGAGCA+TGG | + | chr6_3:70204916-70204935 | None:intergenic | 45.0% | |
| GGATTATGTATCAAGGGTCC+TGG | + | chr6_3:70205041-70205060 | None:intergenic | 45.0% | |
| ATCCTGTGGGTGAAATGGAA+AGG | - | chr6_3:70205057-70205076 | Msa0957860:CDS | 45.0% | |
| AAATGGAAAGGAGAGCCAAC+AGG | - | chr6_3:70205069-70205088 | Msa0957860:CDS | 45.0% | |
| AAACCGCAACTTTAGCCTGT+TGG | + | chr6_3:70205087-70205106 | None:intergenic | 45.0% | |
| ACAGGCTAAAGTTGCGGTTT+AGG | - | chr6_3:70205087-70205106 | Msa0957860:CDS | 45.0% | |
| ! | GTTGCGGTTTAGGACGTTTA+TGG | - | chr6_3:70205097-70205116 | Msa0957860:CDS | 45.0% |
| !! | ATAACGCATCACTTGGTGCA+TGG | - | chr6_3:70205386-70205405 | Msa0957860:CDS | 45.0% |
| TCAACAGCGAATTGCATAGG+AGG | + | chr6_3:70205499-70205518 | None:intergenic | 45.0% | |
| CTCTCAACAGCGAATTGCAT+AGG | + | chr6_3:70205502-70205521 | None:intergenic | 45.0% | |
| CTATGCAATTCGCTGTTGAG+AGG | - | chr6_3:70205500-70205519 | Msa0957860:CDS | 45.0% | |
| TGCACAAATGGCACAGGAAA+AGG | + | chr6_3:70205553-70205572 | None:intergenic | 45.0% | |
| GGTCAAGGCTAGAAGGTTAA+AGG | - | chr6_3:70205883-70205902 | Msa0957860:intron | 45.0% | |
| CTCGCACACAATCTTCTTGC+TGG | - | chr6_3:70204918-70204937 | Msa0957860:CDS | 50.0% | |
| CTCCTTTCCATTTCACCCAC+AGG | + | chr6_3:70205062-70205081 | None:intergenic | 50.0% | |
| GAGCCAACAGGCTAAAGTTG+CGG | - | chr6_3:70205081-70205100 | Msa0957860:CDS | 50.0% | |
| GTAAGAGGATACGATGTCCC+AGG | - | chr6_3:70205467-70205486 | Msa0957860:CDS | 50.0% | |
| ! | TGCATAGGAGGTGTGAACCT+GGG | + | chr6_3:70205487-70205506 | None:intergenic | 50.0% |
| ! | TTGCATAGGAGGTGTGAACC+TGG | + | chr6_3:70205488-70205507 | None:intergenic | 50.0% |
| AGGGCGTGTAACAAACTGGA+GGG | + | chr6_3:70205825-70205844 | None:intergenic | 50.0% | |
| ! | CATGAGGGCGTGTAACAAAC+TGG | + | chr6_3:70205829-70205848 | None:intergenic | 50.0% |
| !! | GCTCACTTTAAGATTGGCGG+TGG | - | chr6_3:70205848-70205867 | Msa0957860:intron | 50.0% |
| !! | ACTTTAAGATTGGCGGTGGC+TGG | - | chr6_3:70205852-70205871 | Msa0957860:intron | 50.0% |
| ACAGGATGGTCAAGGCTAGA+AGG | - | chr6_3:70205876-70205895 | Msa0957860:intron | 50.0% | |
| ! | GACGGTGACAGTGTCGTTAT+CGG | - | chr6_3:70205905-70205924 | Msa0957860:intron | 50.0% |
| CTCGCACACAATCTTCTTGC+TGG | - | chr6_3:70204918-70204937 | Msa0957860:CDS | 50.0% | |
| CTCCTTTCCATTTCACCCAC+AGG | + | chr6_3:70205062-70205081 | None:intergenic | 50.0% | |
| GAGCCAACAGGCTAAAGTTG+CGG | - | chr6_3:70205081-70205100 | Msa0957860:CDS | 50.0% | |
| GTAAGAGGATACGATGTCCC+AGG | - | chr6_3:70205467-70205486 | Msa0957860:CDS | 50.0% | |
| ! | TGCATAGGAGGTGTGAACCT+GGG | + | chr6_3:70205487-70205506 | None:intergenic | 50.0% |
| ! | TTGCATAGGAGGTGTGAACC+TGG | + | chr6_3:70205488-70205507 | None:intergenic | 50.0% |
| AGGGCGTGTAACAAACTGGA+GGG | + | chr6_3:70205825-70205844 | None:intergenic | 50.0% | |
| ! | CATGAGGGCGTGTAACAAAC+TGG | + | chr6_3:70205829-70205848 | None:intergenic | 50.0% |
| !! | GCTCACTTTAAGATTGGCGG+TGG | - | chr6_3:70205848-70205867 | Msa0957860:intron | 50.0% |
| !! | ACTTTAAGATTGGCGGTGGC+TGG | - | chr6_3:70205852-70205871 | Msa0957860:intron | 50.0% |
| ACAGGATGGTCAAGGCTAGA+AGG | - | chr6_3:70205876-70205895 | Msa0957860:intron | 50.0% | |
| ! | GACGGTGACAGTGTCGTTAT+CGG | - | chr6_3:70205905-70205924 | Msa0957860:intron | 50.0% |
| ACGCAATGCAAGCCAGCCTT+TGG | + | chr6_3:70205359-70205378 | None:intergenic | 55.0% | |
| ! | GAGGGCGTGTAACAAACTGG+AGG | + | chr6_3:70205826-70205845 | None:intergenic | 55.0% |
| TGGCTGGAACAGGATGGTCA+AGG | - | chr6_3:70205868-70205887 | Msa0957860:intron | 55.0% | |
| ACGCAATGCAAGCCAGCCTT+TGG | + | chr6_3:70205359-70205378 | None:intergenic | 55.0% | |
| ! | GAGGGCGTGTAACAAACTGG+AGG | + | chr6_3:70205826-70205845 | None:intergenic | 55.0% |
| TGGCTGGAACAGGATGGTCA+AGG | - | chr6_3:70205868-70205887 | Msa0957860:intron | 55.0% | |
| AGATTGGCGGTGGCTGGAAC+AGG | - | chr6_3:70205858-70205877 | Msa0957860:intron | 60.0% | |
| AGATTGGCGGTGGCTGGAAC+AGG | - | chr6_3:70205858-70205877 | Msa0957860:intron | 60.0% | |
| TGGCGGTGGCTGGAACAGGA+TGG | - | chr6_3:70205862-70205881 | Msa0957860:intron | 65.0% | |
| TGGCGGTGGCTGGAACAGGA+TGG | - | chr6_3:70205862-70205881 | Msa0957860:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 70204891 | 70205982 | 70204891 | ID=Msa0957860;Name=Msa0957860 |
| chr6_3 | mRNA | 70204891 | 70205982 | 70204891 | ID=Msa0957860-mRNA-1;Parent=Msa0957860;Name=Msa0957860-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.5|1|1|4|0|266 |
| chr6_3 | exon | 70205934 | 70205982 | 70205934 | ID=Msa0957860-mRNA-1:exon:12824;Parent=Msa0957860-mRNA-1 |
| chr6_3 | exon | 70205755 | 70205831 | 70205755 | ID=Msa0957860-mRNA-1:exon:12823;Parent=Msa0957860-mRNA-1 |
| chr6_3 | exon | 70205231 | 70205650 | 70205231 | ID=Msa0957860-mRNA-1:exon:12822;Parent=Msa0957860-mRNA-1 |
| chr6_3 | exon | 70204891 | 70205145 | 70204891 | ID=Msa0957860-mRNA-1:exon:12821;Parent=Msa0957860-mRNA-1 |
| chr6_3 | CDS | 70205934 | 70205982 | 70205934 | ID=Msa0957860-mRNA-1:cds;Parent=Msa0957860-mRNA-1 |
| chr6_3 | CDS | 70205755 | 70205831 | 70205755 | ID=Msa0957860-mRNA-1:cds;Parent=Msa0957860-mRNA-1 |
| chr6_3 | CDS | 70205231 | 70205650 | 70205231 | ID=Msa0957860-mRNA-1:cds;Parent=Msa0957860-mRNA-1 |
| chr6_3 | CDS | 70204891 | 70205145 | 70204891 | ID=Msa0957860-mRNA-1:cds;Parent=Msa0957860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
