AlfalfaGEDB | Msa1287230

M. sativa cultivar zhongmu-4 / Msa1287230

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1287230	XP_003608017.1	85.535	159	9	1	51	195	11	169	1.56e-89	276

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1287230	sp\|Q9ZUF4\|RIPK_ARATH	84.783	46	7	0	3	48	165	210	2.54e-18	85.1

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1287230	G7JMG0	85.535	159	9	1	51	195	11	169	7.43e-90	276

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0717890	Msa1287230	0.801734	7.829139e-49	-8.615850e-47
Msa0760130	Msa1287230	0.813926	1.999151e-51	-8.615850e-47
Msa1287230	Msa1424680	0.802461	5.549088e-49	-8.615850e-47
Msa0439970	Msa1287230	0.800852	1.186596e-48	-8.615850e-47
Msa1082500	Msa1287230	0.824271	8.834812e-54	-8.615850e-47
Msa1158310	Msa1287230	0.812478	4.155234e-51	-8.615850e-47
Msa1192990	Msa1287230	0.809720	1.645586e-50	-8.615850e-47
Msa0484780	Msa1287230	0.827067	1.919511e-54	-8.615850e-47
Msa0503060	Msa1287230	0.800736	1.252933e-48	-8.615850e-47
Msa0512900	Msa1287230	0.812535	4.037567e-51	-8.615850e-47
Msa0532350	Msa1287230	0.803611	3.209300e-49	-8.615850e-47
Msa0545210	Msa1287230	0.807304	5.397150e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1287230	MtrunA17_Chr4g0045201	85.535	159	9	1	51	195	11	169	1.43e-93	276
Msa1287230	MtrunA17_Chr3g0133661	54.088	159	58	2	51	194	5	163	1.60e-54	176
Msa1287230	MtrunA17_Chr1g0153821	60.169	118	47	0	78	195	61	178	2.08e-47	158
Msa1287230	MtrunA17_Chr8g0374841	47.170	159	69	2	51	195	12	169	6.11e-44	149
Msa1287230	MtrunA17_Chr5g0402461	42.775	173	79	4	38	195	2	169	2.22e-39	137
Msa1287230	MtrunA17_Chr3g0130501	78.378	74	2	1	51	110	80	153	2.49e-33	116
Msa1287230	MtrunA17_Chr3g0136421	100.000	48	0	0	2	49	159	206	1.22e-25	101
Msa1287230	MtrunA17_Chr1g0150741	95.833	48	2	0	2	49	159	206	1.83e-24	98.6
Msa1287230	MtrunA17_Chr2g0300711	85.417	48	7	0	2	49	156	203	9.62e-22	92.0
Msa1287230	MtrunA17_Chr4g0070411	83.333	48	8	0	2	49	162	209	5.71e-21	89.7
Msa1287230	MtrunA17_Chr8g0344141	77.083	48	11	0	2	49	156	203	9.71e-18	80.5
Msa1287230	MtrunA17_Chr5g0416011	75.000	52	12	1	2	53	216	266	2.24e-16	76.6
Msa1287230	MtrunA17_Chr8g0362661	75.000	52	12	1	2	53	214	264	2.92e-16	76.3
Msa1287230	MtrunA17_Chr6g0452761	73.077	52	13	1	2	53	213	263	4.56e-16	75.5
Msa1287230	MtrunA17_Chr7g0216551	67.308	52	17	0	2	53	203	254	5.07e-16	75.5
Msa1287230	MtrunA17_Chr5g0408941	72.917	48	12	1	2	49	169	215	7.86e-16	74.7
Msa1287230	MtrunA17_Chr4g0064201	78.261	46	9	1	2	47	191	235	1.25e-15	74.3
Msa1287230	MtrunA17_Chr7g0245571	70.833	48	14	0	2	49	168	215	3.11e-15	73.2
Msa1287230	MtrunA17_Chr6g0453001	73.333	45	12	0	2	46	134	178	6.41e-15	72.0
Msa1287230	MtrunA17_Chr8g0380441	54.545	66	28	1	2	67	150	213	9.25e-15	71.6
Msa1287230	MtrunA17_Chr3g0104091	73.333	45	12	0	2	46	133	177	1.02e-14	71.6
Msa1287230	MtrunA17_Chr5g0416311	67.391	46	15	0	2	47	156	201	5.92e-14	69.3
Msa1287230	MtrunA17_Chr8g0388941	68.750	48	15	0	2	49	148	195	8.08e-14	68.9
Msa1287230	MtrunA17_Chr5g0448661	64.706	51	16	1	1	49	179	229	1.09e-13	68.6
Msa1287230	MtrunA17_Chr8g0370461	53.030	66	27	2	1	64	171	234	1.27e-13	68.6
Msa1287230	MtrunA17_Chr2g0328211	69.388	49	13	1	2	48	141	189	1.59e-13	67.8
Msa1287230	MtrunA17_Chr5g0406841	66.000	50	15	1	2	49	226	275	2.19e-13	67.8
Msa1287230	MtrunA17_Chr7g0238671	69.388	49	13	1	2	48	153	201	2.25e-13	67.8
Msa1287230	MtrunA17_Chr3g0111591	43.956	91	36	4	2	90	133	210	8.27e-13	64.3
Msa1287230	MtrunA17_Chr2g0328171	71.739	46	11	1	2	45	154	199	1.10e-12	65.5
Msa1287230	MtrunA17_Chr4g0031561	67.347	49	14	1	2	48	173	221	2.12e-12	64.7
Msa1287230	MtrunA17_Chr5g0435211	61.111	54	18	2	2	53	155	207	2.43e-12	64.7
Msa1287230	MtrunA17_Chr3g0111631	59.259	54	19	2	2	53	156	208	3.78e-12	63.9
Msa1287230	MtrunA17_Chr3g0093381	63.636	44	16	0	2	45	188	231	4.15e-12	63.9
Msa1287230	MtrunA17_Chr4g0055301	57.692	52	22	0	2	53	149	200	4.27e-12	63.9
Msa1287230	MtrunA17_Chr5g0441021	59.574	47	19	0	2	48	150	196	5.70e-12	63.5
Msa1287230	MtrunA17_Chr4g0060531	57.143	49	20	1	2	49	162	210	7.17e-12	63.2
Msa1287230	MtrunA17_Chr4g0031541	64.583	48	15	1	2	47	162	209	9.70e-12	62.8
Msa1287230	MtrunA17_Chr4g0031591	67.391	46	13	1	2	45	172	217	1.34e-11	62.4
Msa1287230	MtrunA17_Chr8g0370571	55.769	52	20	1	1	49	134	185	1.63e-11	62.0
Msa1287230	MtrunA17_Chr4g0031571	63.265	49	16	1	2	48	175	223	3.05e-11	61.6
Msa1287230	MtrunA17_Chr5g0399981	53.846	52	24	0	2	53	143	194	3.58e-11	61.2
Msa1287230	MtrunA17_Chr3g0143951	60.417	48	18	1	2	49	162	208	4.06e-11	61.2
Msa1287230	MtrunA17_Chr8g0389251	42.857	63	36	0	2	64	474	536	5.35e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1287230	AT4G34420.1	57.233	159	54	1	51	195	11	169	2.41e-60	192
Msa1287230	AT2G15730.2	58.491	159	52	1	51	195	11	169	5.86e-60	189
Msa1287230	AT2G15730.1	58.491	159	52	1	51	195	11	169	1.43e-59	190
Msa1287230	AT2G15730.3	71.304	115	33	0	81	195	22	136	4.78e-58	185
Msa1287230	AT3G50620.1	48.387	155	66	3	53	195	15	167	3.52e-42	145
Msa1287230	AT3G50620.2	49.645	141	57	3	67	195	1	139	2.55e-39	137
Msa1287230	AT3G50620.3	49.645	141	57	3	67	195	1	139	2.55e-39	137
Msa1287230	AT2G05940.1	84.783	46	7	0	3	48	165	210	2.58e-19	85.1
Msa1287230	AT2G26290.1	79.167	48	10	0	2	49	165	212	4.60e-18	81.6
Msa1287230	AT1G26970.2	70.213	47	14	0	2	48	49	95	1.82e-16	76.3
Msa1287230	AT1G26970.1	71.739	46	13	0	2	47	164	209	3.36e-16	76.3
Msa1287230	AT3G01300.1	63.492	63	21	2	2	64	216	276	4.07e-16	76.3
Msa1287230	AT5G15080.1	63.492	63	21	2	2	64	222	282	4.24e-16	76.3
Msa1287230	AT3G28690.1	73.077	52	13	1	2	53	106	156	4.73e-16	75.5
Msa1287230	AT3G28690.3	73.077	52	13	1	2	53	155	205	4.93e-16	75.9
Msa1287230	AT3G28690.2	73.077	52	13	1	2	53	206	256	5.24e-16	75.9
Msa1287230	AT5G35580.1	72.917	48	13	0	2	49	153	200	9.59e-16	75.1
Msa1287230	AT5G35580.2	72.917	48	13	0	2	49	165	212	1.04e-15	75.1
Msa1287230	AT5G01020.1	72.917	48	13	0	2	49	146	193	1.67e-15	74.3
Msa1287230	AT1G61590.1	71.111	45	13	0	2	46	176	220	1.92e-15	73.9
Msa1287230	AT1G69790.2	69.565	46	14	0	2	47	153	198	2.37e-15	73.6
Msa1287230	AT1G69790.1	69.565	46	14	0	2	47	164	209	2.50e-15	73.6
Msa1287230	AT1G72540.1	66.667	48	16	0	2	49	161	208	3.94e-15	73.2
Msa1287230	AT2G17220.1	66.667	51	15	1	1	49	164	214	1.24e-14	71.6
Msa1287230	AT2G17220.2	66.667	51	15	1	1	49	163	213	1.30e-14	71.6
Msa1287230	AT1G14370.1	69.565	46	14	0	2	47	166	211	1.65e-14	71.2
Msa1287230	AT5G56460.1	68.750	48	15	0	2	49	156	203	1.70e-14	71.2
Msa1287230	AT2G07180.1	70.833	48	14	0	2	49	167	214	1.93e-14	71.2
Msa1287230	AT2G07180.2	70.833	48	14	0	2	49	167	214	1.93e-14	71.2
Msa1287230	AT2G02800.1	67.391	46	15	0	2	47	163	208	3.19e-14	70.5
Msa1287230	AT2G02800.2	67.391	46	15	0	2	47	163	208	3.19e-14	70.5
Msa1287230	AT1G74490.1	52.381	63	28	1	2	64	165	225	5.81e-14	69.7
Msa1287230	AT2G28930.1	69.388	49	13	1	2	48	160	208	9.38e-14	69.3
Msa1287230	AT2G28930.2	69.388	49	13	1	2	48	149	197	9.56e-14	69.3
Msa1287230	AT2G28930.3	69.388	49	13	1	2	48	152	200	9.99e-14	68.9
Msa1287230	AT5G02290.2	68.750	48	13	1	2	47	148	195	1.53e-13	68.6
Msa1287230	AT5G02290.1	68.750	48	13	1	2	47	148	195	1.53e-13	68.6
Msa1287230	AT1G07570.4	67.347	49	14	1	2	48	32	80	1.67e-13	67.8
Msa1287230	AT1G07570.1	67.347	49	14	1	2	48	148	196	3.01e-13	67.8
Msa1287230	AT1G07570.5	67.347	49	14	1	2	48	148	196	3.01e-13	67.8
Msa1287230	AT1G07570.2	67.347	49	14	1	2	48	148	196	3.01e-13	67.8
Msa1287230	AT1G76360.1	60.417	48	19	0	2	49	243	290	3.13e-13	67.8
Msa1287230	AT1G07570.3	67.347	49	14	1	2	48	159	207	3.47e-13	67.4
Msa1287230	AT2G39660.1	61.111	54	18	2	2	53	147	199	1.37e-11	62.8
Msa1287230	AT5G47070.1	62.222	45	17	0	2	46	167	211	1.95e-11	62.4
Msa1287230	AT1G55200.3	41.270	63	37	0	2	64	449	511	8.42e-11	60.8
Msa1287230	AT1G55200.4	41.270	63	37	0	2	64	449	511	8.42e-11	60.8
Msa1287230	AT1G55200.1	41.270	63	37	0	2	64	449	511	8.42e-11	60.8
Msa1287230	AT1G55200.2	41.270	63	37	0	2	64	449	511	8.42e-11	60.8

Find 103 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATAATCTAGACTGGTTTAA+TGG	0.212909	8_3:+37207913	Msa1287230:CDS
GTTCTTCATTGTTGCCTAAT+TGG	0.215523	8_3:+37207049	Msa1287230:five_prime_UTR
TTGATAATTGAAATATAAAT+TGG	0.216239	8_3:+37206930	Msa1287230:five_prime_UTR
ATTGAAACACTTGACCTTCA+TGG	0.265501	8_3:-37206822	None:intergenic
ATATTCTACTATTGATGATT+TGG	0.300863	8_3:+37205598	Msa1287230:five_prime_UTR
CTCCAAAGCACTCAACTAAA+AGG	0.311692	8_3:-37204791	None:intergenic
CTTGACGTGGATTCTTAATC+AGG	0.318456	8_3:+37207974	Msa1287230:exon
TTTGAAGTTTGTAGGATTGA+TGG	0.325667	8_3:+37206408	Msa1287230:intron
TCTCTTCCTTTGCACTCATC+TGG	0.326355	8_3:-37205992	None:intergenic
TTCTGTCGATGCAGAGATTT+GGG	0.328260	8_3:+37207770	Msa1287230:CDS
TTGCATGTTGATAATCTTGT+TGG	0.328883	8_3:-37204759	None:intergenic
ATTCTGTCGATGCAGAGATT+TGG	0.344902	8_3:+37207769	Msa1287230:CDS
ATAAGCACTGGTAGCAGAAT+TGG	0.362402	8_3:+37207512	Msa1287230:CDS
TGAGGAGGAGCAGATGCTTT+TGG	0.367641	8_3:+37207081	Msa1287230:exon
GTTGATAATCTTGTTGGAAA+AGG	0.372256	8_3:-37204753	None:intergenic
TGTCAGATGAGTGGTGATTC+TGG	0.373206	8_3:+37206681	Msa1287230:intron
TGATTTGGATAATGCACATA+AGG	0.378317	8_3:-37207599	None:intergenic
AGCTAAATACATTGTAAAGC+TGG	0.378320	8_3:+37205529	Msa1287230:five_prime_UTR
GATTGATGGTTCAGTGAGAT+TGG	0.381066	8_3:+37206422	Msa1287230:five_prime_UTR
TCAATGTTAGGTCCAGAAAA+AGG	0.389623	8_3:-37207563	None:intergenic
TTGTTGGAAAAGGGAAGTTT+TGG	0.392676	8_3:-37204743	None:intergenic
GAATTCGCCGGCGGTGGGAT+TGG	0.402273	8_3:+37204649	Msa1287230:five_prime_UTR
TCCACATTTGAGCTTATGTT+AGG	0.404869	8_3:-37207826	None:intergenic
TGGTGAAGATTGTAAAAGAA+AGG	0.410674	8_3:-37204723	None:intergenic
TGGATTCCCCACAACAAATC+AGG	0.417431	8_3:+37204669	Msa1287230:five_prime_UTR
TGAAGAATTCGACGTTGGTT+TGG	0.419557	8_3:+37207465	Msa1287230:CDS
TGGACCTAACATTGAACCTT+GGG	0.419784	8_3:+37207571	Msa1287230:CDS
CCTCACAACAGTATCCAATT+AGG	0.423095	8_3:-37207063	None:intergenic
ACTAGAATGAAAATTGCATT+AGG	0.423344	8_3:+37207280	Msa1287230:CDS
TTGATAATCTTGTTGGAAAA+GGG	0.429487	8_3:-37204752	None:intergenic
ATCTCCCAAGGTTCAATGTT+AGG	0.434751	8_3:-37207575	None:intergenic
GGTGAAGATTGTAAAAGAAA+GGG	0.452170	8_3:-37204722	None:intergenic
GTGCACGGCTGCTGTTGGCT+TGG	0.453357	8_3:+37207951	Msa1287230:CDS
AACGACAATAACAGAGACTT+TGG	0.453474	8_3:+37207882	Msa1287230:CDS
TTGTGGAAAAGAACAATAAC+CGG	0.454826	8_3:+37206738	Msa1287230:five_prime_UTR
AGAGAAGAATTCGCCGGCGG+TGG	0.455458	8_3:+37204643	Msa1287230:five_prime_UTR
AAACACTGTATCTTTGCTTC+CGG	0.457800	8_3:-37206757	None:intergenic
GAGGGAGAGGGAGGGCGTAC+CGG	0.461674	8_3:+37204588	Msa1287230:five_prime_UTR
GGAGGGAGCCTGATTTGTTG+TGG	0.463630	8_3:-37204677	None:intergenic
GGAGAAGAAGTCGCCGGCGG+TGG	0.465987	8_3:+37204609	Msa1287230:five_prime_UTR
GTGCAAAGGAAGAGATTGTT+AGG	0.469045	8_3:+37206000	Msa1287230:five_prime_UTR
ACCGCCGGCGAATTCTTCTC+TGG	0.470503	8_3:-37204641	None:intergenic
GATCCATCATATATTGCTAC+TGG	0.472187	8_3:-37206892	None:intergenic
AAGAATATGTTGTCTTCCTC+AGG	0.473205	8_3:-37206717	None:intergenic
AGAATTCGACGTTGGTTTGG+AGG	0.483571	8_3:+37207468	Msa1287230:CDS
AATTGCATTAGGTGCAGCTA+AGG	0.490148	8_3:+37207291	Msa1287230:CDS
CAAGTTTATCTGCTTCATGA+AGG	0.492384	8_3:-37207324	None:intergenic
GTACATGACAAGAGGGAGCT+TGG	0.497616	8_3:+37207111	Msa1287230:CDS
CTGGACCTAACATTGAACCT+TGG	0.498513	8_3:+37207570	Msa1287230:CDS
GCTAAATACATTGTAAAGCT+GGG	0.498858	8_3:+37205530	Msa1287230:five_prime_UTR
ACCGCCGGCGACTTCTTCTC+CGG	0.501443	8_3:-37204607	None:intergenic
TGTAAAGTGCATACAAGGAT+TGG	0.505406	8_3:+37205483	Msa1287230:five_prime_UTR
TTCCTTTGCACTCATCTGGA+TGG	0.513836	8_3:-37205988	None:intergenic
ACACAATTTATAATCTAGAC+TGG	0.515373	8_3:+37207905	Msa1287230:CDS
TGCAGAGATTTGGGAGTGGA+TGG	0.517207	8_3:+37207779	Msa1287230:CDS
GAACTATGATATAAAAGTGC+AGG	0.521762	8_3:+37206444	Msa1287230:five_prime_UTR
GAGGGAGCCTGATTTGTTGT+GGG	0.524923	8_3:-37204676	None:intergenic
AAGAAGTCGCCGGCGGTGGG+AGG	0.528234	8_3:+37204613	Msa1287230:five_prime_UTR
TTTCCAGTAGCAATATATGA+TGG	0.529167	8_3:+37206889	Msa1287230:five_prime_UTR
GCTGTTGGCTTGGCTTGACG+TGG	0.530682	8_3:+37207961	Msa1287230:exon
GACGACAGTGAGAGAGGGGA+GGG	0.531610	8_3:-37204694	None:intergenic
GAATAGTAAAATACCGCAGC+GGG	0.532598	8_3:-37207750	None:intergenic
TGAAATGTAAAGTGCATACA+AGG	0.533857	8_3:+37205478	Msa1287230:five_prime_UTR
CAAATCACAAAACTTATAGC+AGG	0.544882	8_3:+37207615	Msa1287230:CDS
AAACGGACGACAGTGAGAGA+GGG	0.544990	8_3:-37204699	None:intergenic
CTGGCACTCCCTCCCACCGC+CGG	0.549147	8_3:-37204622	None:intergenic
TGTTTGTTAGGGAGGAATGC+AGG	0.553300	8_3:+37207722	Msa1287230:intron
GGTTTGGAGGTTGATCGTGT+TGG	0.562871	8_3:+37207481	Msa1287230:CDS
AGAAGTCGCCGGCGGTGGGA+GGG	0.564843	8_3:+37204614	Msa1287230:five_prime_UTR
TCCTAACATAAGCTCAAATG+TGG	0.570488	8_3:+37207825	Msa1287230:CDS
GAGAAGAAGTCGCCGGCGGT+GGG	0.571292	8_3:+37204610	Msa1287230:five_prime_UTR
GAGAAGAATTCGCCGGCGGT+GGG	0.571292	8_3:+37204644	Msa1287230:five_prime_UTR
GATTGTAAAAGAAAGGGAAA+CGG	0.573130	8_3:-37204716	None:intergenic
GAAACGGACGACAGTGAGAG+AGG	0.573396	8_3:-37204700	None:intergenic
AATGAGTGCACGGCTGCTGT+TGG	0.580279	8_3:+37207946	Msa1287230:CDS
GGACGACAGTGAGAGAGGGG+AGG	0.582908	8_3:-37204695	None:intergenic
CTTCTACTTGCTAGAGACAA+GGG	0.589224	8_3:+37205566	Msa1287230:five_prime_UTR
AACGGACGACAGTGAGAGAG+GGG	0.597412	8_3:-37204698	None:intergenic
AGGAAGACAACATATTCTTG+TGG	0.600574	8_3:+37206721	Msa1287230:five_prime_UTR
GCTTCTACTTGCTAGAGACA+AGG	0.602303	8_3:+37205565	Msa1287230:five_prime_UTR
GGGGAATCCAATCCCACCGC+CGG	0.602871	8_3:-37204656	None:intergenic
AGGGAGCCTGATTTGTTGTG+GGG	0.603431	8_3:-37204675	None:intergenic
GTGTATGAGTACATGACAAG+AGG	0.617548	8_3:+37207103	Msa1287230:CDS
AATGCAGGTGCCACCCGCTG+CGG	0.621498	8_3:+37207737	Msa1287230:CDS
TAGTAAAATACCGCAGCGGG+TGG	0.630606	8_3:-37207747	None:intergenic
GGGTTTGAAGAATTCGACGT+TGG	0.638156	8_3:+37207460	Msa1287230:CDS
TGCACATAAGGAATCTCCCA+AGG	0.639238	8_3:-37207587	None:intergenic
AGTGCCAGAGAAGAATTCGC+CGG	0.640292	8_3:+37204637	Msa1287230:five_prime_UTR
TTTAGTTGAGTGCTTTGGAG+CGG	0.643936	8_3:+37204794	Msa1287230:five_prime_UTR
TACCATCCAGATGAGTGCAA+AGG	0.651843	8_3:+37205986	Msa1287230:five_prime_UTR
ATTGCATTAGGTGCAGCTAA+GGG	0.656681	8_3:+37207292	Msa1287230:CDS
TTCTACTTGCTAGAGACAAG+GGG	0.659680	8_3:+37205567	Msa1287230:five_prime_UTR
TGTATGAGTACATGACAAGA+GGG	0.666417	8_3:+37207104	Msa1287230:CDS
TGATTGGACTGTCAGATGAG+TGG	0.670291	8_3:+37206672	Msa1287230:intron
CGTACCGGAGAAGAAGTCGC+CGG	0.673007	8_3:+37204603	Msa1287230:five_prime_UTR
ACCGGAGAAGAAGTCGCCGG+CGG	0.676331	8_3:+37204606	Msa1287230:five_prime_UTR
AATTGGATACTGTTGTGAGG+AGG	0.680705	8_3:+37207066	Msa1287230:five_prime_UTR
TCGATGCAGAGATTTGGGAG+TGG	0.682682	8_3:+37207775	Msa1287230:CDS
CCTAATTGGATACTGTTGTG+AGG	0.693032	8_3:+37207063	Msa1287230:five_prime_UTR
GATACTCTGCTACATTACCA+TGG	0.696698	8_3:+37207254	Msa1287230:CDS
GCCAGAGAAGAATTCGCCGG+CGG	0.703868	8_3:+37204640	Msa1287230:five_prime_UTR
CAAAGGAAGAGATTGTTAGG+CGG	0.707080	8_3:+37206003	Msa1287230:five_prime_UTR
AGAATAGTAAAATACCGCAG+CGG	0.733285	8_3:-37207751	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATTAATCCATTATATT+GGG	-	chr8_3:37206374-37206393	None:intergenic	10.0%
!!	AAAATATTAATCCATTATAT+TGG	-	chr8_3:37206375-37206394	None:intergenic	10.0%
!!!	ATTAATATTTTACTGAATAA+GGG	+	chr8_3:37206384-37206403	Msa1287230:intron	10.0%
!!!	TTGATAATTGAAATATAAAT+TGG	+	chr8_3:37206930-37206949	Msa1287230:five_prime_UTR	10.0%
!!	ATATGTATATAATATAGTAT+TGG	-	chr8_3:37207180-37207199	None:intergenic	10.0%
!!!	ATATTTTGATGTAAACAATT+AGG	+	chr8_3:37205643-37205662	Msa1287230:intron	15.0%
!!	TCTAAATAGATATAAAAATG+TGG	+	chr8_3:37205900-37205919	Msa1287230:intron	15.0%
!!!	TTTTTAGATCCTTAAATATA+TGG	+	chr8_3:37206142-37206161	Msa1287230:intron	15.0%
!!!	GATTAATATTTTACTGAATA+AGG	+	chr8_3:37206383-37206402	Msa1287230:intron	15.0%
!!	AATACAAAACATTAATATCT+AGG	-	chr8_3:37206648-37206667	None:intergenic	15.0%
!!	AGATAAACTTGTAATATATA+GGG	+	chr8_3:37207336-37207355	Msa1287230:intron	15.0%
!!	TTCAATAATGTTGTAATTAA+TGG	+	chr8_3:37207414-37207433	Msa1287230:intron	15.0%
!!!	TGTTTCATATCAAATTTGTT+TGG	+	chr8_3:37204904-37204923	Msa1287230:intron	20.0%
!!!	GTTTCATATCAAATTTGTTT+GGG	+	chr8_3:37204905-37204924	Msa1287230:intron	20.0%
!!!	TTTTTTTTGAAATTTTGTGC+TGG	+	chr8_3:37204946-37204965	Msa1287230:intron	20.0%
!!!	TTTTTTTGAAATTTTGTGCT+GGG	+	chr8_3:37204947-37204966	Msa1287230:intron	20.0%
!!!	TTTGATTATTGAGTTTTGAT+CGG	+	chr8_3:37204971-37204990	Msa1287230:intron	20.0%
!!!	TTTGTTTTGTTGTTTGTTTT+TGG	+	chr8_3:37205033-37205052	Msa1287230:intron	20.0%
!!!	TTTGGATGATTTTGTATTAT+CGG	+	chr8_3:37205051-37205070	Msa1287230:intron	20.0%
!!!	TGTTGATTTGAATATGAATT+TGG	+	chr8_3:37205074-37205093	Msa1287230:intron	20.0%
!!!	TGAATATGAATTTGGTTTTA+TGG	+	chr8_3:37205082-37205101	Msa1287230:intron	20.0%
!!!	GAATATGAATTTGGTTTTAT+GGG	+	chr8_3:37205083-37205102	Msa1287230:intron	20.0%
!!!	TTGTAGCTTAAATTTTGAAT+TGG	+	chr8_3:37205154-37205173	Msa1287230:intron	20.0%
!!!	TGTAGCTTAAATTTTGAATT+GGG	+	chr8_3:37205155-37205174	Msa1287230:intron	20.0%
!!	AGATTTGATGAAGATTAAAA+TGG	+	chr8_3:37205206-37205225	Msa1287230:intron	20.0%
!!	GATTTGATGAAGATTAAAAT+GGG	+	chr8_3:37205207-37205226	Msa1287230:intron	20.0%
!!	GTAATTGTAAATTTGTAGTA+AGG	+	chr8_3:37205428-37205447	Msa1287230:intron	20.0%
!!!	ATATTCTACTATTGATGATT+TGG	+	chr8_3:37205598-37205617	Msa1287230:five_prime_UTR	20.0%
!!!	ATCTTAATTGGATTTGTTTT+AGG	+	chr8_3:37205924-37205943	Msa1287230:intron	20.0%
!!!	GTTTTTCTAGATGAATATTT+GGG	+	chr8_3:37205946-37205965	Msa1287230:intron	20.0%
!!!	GGATAATTTAGTGAAATTTT+AGG	-	chr8_3:37206067-37206086	None:intergenic	20.0%
!!	TAACTATGCAATGAAAATTA+AGG	-	chr8_3:37206088-37206107	None:intergenic	20.0%
!!	AATCAATGTCCATATATTTA+AGG	-	chr8_3:37206154-37206173	None:intergenic	20.0%
!!	AATAGTGTATTTCAAATCAA+TGG	-	chr8_3:37206248-37206267	None:intergenic	20.0%
!!!	AGATTTGAATTTTTAGTAAG+TGG	+	chr8_3:37206339-37206358	Msa1287230:intron	20.0%
!!	ACATGAAAAAAATGAAACAT+TGG	-	chr8_3:37206476-37206495	None:intergenic	20.0%
!!!	ATGTTTTGTATTTTTGTGAT+TGG	+	chr8_3:37206656-37206675	Msa1287230:intron	20.0%
!!!	TATATTTTTGCTTCTTTAAG+AGG	-	chr8_3:37206799-37206818	None:intergenic	20.0%
!!	CAGATAAACTTGTAATATAT+AGG	+	chr8_3:37207335-37207354	Msa1287230:intron	20.0%
!!	TTGATAATCTTGTTGGAAAA+GGG	-	chr8_3:37204755-37204774	None:intergenic	25.0%
!!	AAAATTGAGAATTGGTTTAG+TGG	+	chr8_3:37204999-37205018	Msa1287230:intron	25.0%
!!	AAATTGAGAATTGGTTTAGT+GGG	+	chr8_3:37205000-37205019	Msa1287230:intron	25.0%
!!!	ATGGGTTTCATATGTTTTTT+TGG	+	chr8_3:37205101-37205120	Msa1287230:intron	25.0%
!	AAACTGAAAAAGATTTGAGT+AGG	+	chr8_3:37205264-37205283	Msa1287230:intron	25.0%
!	TGTTTACATCAAAATATGAC+AGG	-	chr8_3:37205640-37205659	None:intergenic	25.0%
!	TCAATAATAGACATCAACTA+TGG	-	chr8_3:37205694-37205713	None:intergenic	25.0%
!!!	TGATGTTGATCTGTTTTTAT+AGG	+	chr8_3:37205861-37205880	Msa1287230:intron	25.0%
!	TAAAAATGTGGCATCTTAAT+TGG	+	chr8_3:37205912-37205931	Msa1287230:intron	25.0%
!!	GGTTTTTCTAGATGAATATT+TGG	+	chr8_3:37205945-37205964	Msa1287230:intron	25.0%
!!	ATATGGACATTGATTGATAT+TGG	+	chr8_3:37206159-37206178	Msa1287230:intron	25.0%
!!	ATTGGAGATTTAAGATCAAT+CGG	+	chr8_3:37206177-37206196	Msa1287230:intron	25.0%
!	GTTCAAATGCACAATTTATT+TGG	+	chr8_3:37206291-37206310	Msa1287230:intron	25.0%
!	CTTACAGAGAAATAAACAAA+TGG	-	chr8_3:37206504-37206523	None:intergenic	25.0%
!!!	ATCGTTTCTTTATTTTGTTG+AGG	+	chr8_3:37206542-37206561	Msa1287230:intron	25.0%
!	CTATTAGTTAAACACATGTT+TGG	-	chr8_3:37206608-37206627	None:intergenic	25.0%
!	GCAAAAATATATATCCATGA+AGG	+	chr8_3:37206808-37206827	Msa1287230:five_prime_UTR	25.0%
!	AAATTGAAAAACACAAACAC+GGG	-	chr8_3:37206872-37206891	None:intergenic	25.0%
!	GAAATTGAAAAACACAAACA+CGG	-	chr8_3:37206873-37206892	None:intergenic	25.0%
!!	TTCATAGTATCTGAACTTTT+AGG	+	chr8_3:37206997-37207016	Msa1287230:five_prime_UTR	25.0%
!	CATATATTAATCATGCTGTA+AGG	+	chr8_3:37207195-37207214	Msa1287230:intron	25.0%
!	ACTAGAATGAAAATTGCATT+AGG	+	chr8_3:37207280-37207299	Msa1287230:CDS	25.0%
!	ATGTTGTAATTAATGGTTAC+AGG	+	chr8_3:37207421-37207440	Msa1287230:intron	25.0%
!	ACACAATTTATAATCTAGAC+TGG	+	chr8_3:37207905-37207924	Msa1287230:CDS	25.0%
!!!	TATAATCTAGACTGGTTTAA+TGG	+	chr8_3:37207913-37207932	Msa1287230:CDS	25.0%
	GATTGTAAAAGAAAGGGAAA+CGG	-	chr8_3:37204719-37204738	None:intergenic	30.0%
	GGTGAAGATTGTAAAAGAAA+GGG	-	chr8_3:37204725-37204744	None:intergenic	30.0%
	TGGTGAAGATTGTAAAAGAA+AGG	-	chr8_3:37204726-37204745	None:intergenic	30.0%
!!	GTTGATAATCTTGTTGGAAA+AGG	-	chr8_3:37204756-37204775	None:intergenic	30.0%
!!	TTGCATGTTGATAATCTTGT+TGG	-	chr8_3:37204762-37204781	None:intergenic	30.0%
	AGACGTTTCTGATATGAAAA+TGG	-	chr8_3:37204869-37204888	None:intergenic	30.0%
	TGAAATGTAAAGTGCATACA+AGG	+	chr8_3:37205478-37205497	Msa1287230:five_prime_UTR	30.0%
	AGCTAAATACATTGTAAAGC+TGG	+	chr8_3:37205529-37205548	Msa1287230:five_prime_UTR	30.0%
	GCTAAATACATTGTAAAGCT+GGG	+	chr8_3:37205530-37205549	Msa1287230:five_prime_UTR	30.0%
!	TGTGAATAGAAAGTATGACT+AGG	+	chr8_3:37205718-37205737	Msa1287230:intron	30.0%
!	CTTATGGTGTTCAAGTTAAA+TGG	-	chr8_3:37205759-37205778	None:intergenic	30.0%
	GTATTTCAAATCAATGGTGA+AGG	-	chr8_3:37206242-37206261	None:intergenic	30.0%
!!!	ATAAGGGTTTTGAAGTTTGT+AGG	+	chr8_3:37206400-37206419	Msa1287230:intron	30.0%
!	TTTGAAGTTTGTAGGATTGA+TGG	+	chr8_3:37206408-37206427	Msa1287230:intron	30.0%
!	GAACTATGATATAAAAGTGC+AGG	+	chr8_3:37206444-37206463	Msa1287230:five_prime_UTR	30.0%
	CATGTGTTTAACTAATAGTG+TGG	+	chr8_3:37206610-37206629	Msa1287230:intron	30.0%
	TTGTGGAAAAGAACAATAAC+CGG	+	chr8_3:37206738-37206757	Msa1287230:five_prime_UTR	30.0%
	TTTCCAGTAGCAATATATGA+TGG	+	chr8_3:37206889-37206908	Msa1287230:five_prime_UTR	30.0%
!!	ATTTTCATTCTAGTTGACCA+TGG	-	chr8_3:37207274-37207293	None:intergenic	30.0%
!	GTTATTCAAATGCCTTTTTC+TGG	+	chr8_3:37207551-37207570	Msa1287230:CDS	30.0%
!	TGATTTGGATAATGCACATA+AGG	-	chr8_3:37207602-37207621	None:intergenic	30.0%
!!	CTGCTATAAGTTTTGTGATT+TGG	-	chr8_3:37207617-37207636	None:intergenic	30.0%
	CAAATCACAAAACTTATAGC+AGG	+	chr8_3:37207615-37207634	Msa1287230:CDS	30.0%
	TCGTTGTTTGTTTGTTTGTT+AGG	+	chr8_3:37207710-37207729	Msa1287230:intron	30.0%
!	CGTTGTTTGTTTGTTTGTTA+GGG	+	chr8_3:37207711-37207730	Msa1287230:intron	30.0%
!	CTCAAATGTGGAAATCTTTT+CGG	+	chr8_3:37207837-37207856	Msa1287230:CDS	30.0%
!	TTGTTGGAAAAGGGAAGTTT+TGG	-	chr8_3:37204746-37204765	None:intergenic	35.0%
!!	ATCCTTTTAGTTGAGTGCTT+TGG	+	chr8_3:37204789-37204808	Msa1287230:five_prime_UTR	35.0%
	AGAAACGTCTCTCTTTGAAT+CGG	+	chr8_3:37204879-37204898	Msa1287230:intron	35.0%
!!	GATTATTGAGTTTTGATCGG+TGG	+	chr8_3:37204974-37204993	Msa1287230:intron	35.0%
	CGGTGGAAAAAATTGAGAAT+TGG	+	chr8_3:37204991-37205010	Msa1287230:intron	35.0%
	TGAATTGGGTGTTCTTATTG+AGG	+	chr8_3:37205169-37205188	Msa1287230:intron	35.0%
	AGATAGTGATCCTATGATAG+AGG	+	chr8_3:37205325-37205344	Msa1287230:intron	35.0%
	TGGATTTCTGACTATGCTAT+TGG	+	chr8_3:37205362-37205381	Msa1287230:intron	35.0%
	GGATTTCTGACTATGCTATT+GGG	+	chr8_3:37205363-37205382	Msa1287230:intron	35.0%
!	GCATTTATTGTCATTTCTGC+AGG	+	chr8_3:37205450-37205469	Msa1287230:intron	35.0%
	TGTAAAGTGCATACAAGGAT+TGG	+	chr8_3:37205483-37205502	Msa1287230:five_prime_UTR	35.0%
!!	ATCAACTATGGTTTTTGAGC+CGG	-	chr8_3:37205682-37205701	None:intergenic	35.0%
	GTATGACTAGGCATATAAGA+TGG	+	chr8_3:37205730-37205749	Msa1287230:intron	35.0%
	AAGCATCAGTCATTCACTTA+TGG	-	chr8_3:37205775-37205794	None:intergenic	35.0%
!	TGAATGACTGATGCTTTTGT+AGG	+	chr8_3:37205779-37205798	Msa1287230:intron	35.0%
!	GGAGTTTTACTTGATCAATG+AGG	+	chr8_3:37206024-37206043	Msa1287230:five_prime_UTR	35.0%
!	GACTAAAGTGCCCAATATAA+TGG	+	chr8_3:37206361-37206380	Msa1287230:intron	35.0%
!!	AGTTTTTGCCAAAAGTACAG+TGG	+	chr8_3:37206570-37206589	Msa1287230:intron	35.0%
	AAGAATATGTTGTCTTCCTC+AGG	-	chr8_3:37206720-37206739	None:intergenic	35.0%
	AGGAAGACAACATATTCTTG+TGG	+	chr8_3:37206721-37206740	Msa1287230:five_prime_UTR	35.0%
	AAACACTGTATCTTTGCTTC+CGG	-	chr8_3:37206760-37206779	None:intergenic	35.0%
	ATTGAAACACTTGACCTTCA+TGG	-	chr8_3:37206825-37206844	None:intergenic	35.0%
	GATCCATCATATATTGCTAC+TGG	-	chr8_3:37206895-37206914	None:intergenic	35.0%
!	TCTGATTTTCTCAGCTGATT+TGG	+	chr8_3:37206970-37206989	Msa1287230:five_prime_UTR	35.0%
!!!	CTTTTAGGATTGCTTCAATG+AGG	+	chr8_3:37207012-37207031	Msa1287230:five_prime_UTR	35.0%
	GTTCTTCATTGTTGCCTAAT+TGG	+	chr8_3:37207049-37207068	Msa1287230:five_prime_UTR	35.0%
	TGTATGAGTACATGACAAGA+GGG	+	chr8_3:37207104-37207123	Msa1287230:CDS	35.0%
!	TTCTTTGTTGTGATTCAAGC+AGG	+	chr8_3:37207232-37207251	Msa1287230:intron	35.0%
	CAAGTTTATCTGCTTCATGA+AGG	-	chr8_3:37207327-37207346	None:intergenic	35.0%
	TCAATGTTAGGTCCAGAAAA+AGG	-	chr8_3:37207566-37207585	None:intergenic	35.0%
!	TGTTTGTTTGTTTGTTAGGG+AGG	+	chr8_3:37207714-37207733	Msa1287230:intron	35.0%
	AGAATAGTAAAATACCGCAG+CGG	-	chr8_3:37207754-37207773	None:intergenic	35.0%
	TCCTAACATAAGCTCAAATG+TGG	+	chr8_3:37207825-37207844	Msa1287230:CDS	35.0%
	TCCACATTTGAGCTTATGTT+AGG	-	chr8_3:37207829-37207848	None:intergenic	35.0%
!	TGTGGAAATCTTTTCGGTTA+AGG	+	chr8_3:37207843-37207862	Msa1287230:CDS	35.0%
!	TCTTTTCGGTTAAGGTTAGA+AGG	+	chr8_3:37207851-37207870	Msa1287230:CDS	35.0%
	AACGACAATAACAGAGACTT+TGG	+	chr8_3:37207882-37207901	Msa1287230:CDS	35.0%
!	TGCTTCTAAAAATGAGTGCA+CGG	+	chr8_3:37207936-37207955	Msa1287230:CDS	35.0%
!	CTCCAAAGCACTCAACTAAA+AGG	-	chr8_3:37204794-37204813	None:intergenic	40.0%
!!	TTTAGTTGAGTGCTTTGGAG+CGG	+	chr8_3:37204794-37204813	Msa1287230:five_prime_UTR	40.0%
	GAAAATGGATCGATCAACAG+TGG	-	chr8_3:37204854-37204873	None:intergenic	40.0%
!	TGAGAATTGGTTTAGTGGGT+CGG	+	chr8_3:37205004-37205023	Msa1287230:intron	40.0%
	TAGTGATCCTATGATAGAGG+TGG	+	chr8_3:37205328-37205347	Msa1287230:intron	40.0%
	ATCCTATGATAGAGGTGGTT+TGG	+	chr8_3:37205333-37205352	Msa1287230:intron	40.0%
	TCCTATGATAGAGGTGGTTT+GGG	+	chr8_3:37205334-37205353	Msa1287230:intron	40.0%
!	CTTCTACTTGCTAGAGACAA+GGG	+	chr8_3:37205566-37205585	Msa1287230:five_prime_UTR	40.0%
!	TTCTACTTGCTAGAGACAAG+GGG	+	chr8_3:37205567-37205586	Msa1287230:five_prime_UTR	40.0%
	GTGCAAAGGAAGAGATTGTT+AGG	+	chr8_3:37206000-37206019	Msa1287230:five_prime_UTR	40.0%
	CAAAGGAAGAGATTGTTAGG+CGG	+	chr8_3:37206003-37206022	Msa1287230:five_prime_UTR	40.0%
	GAACAAAACATGACTGTGAG+TGG	-	chr8_3:37206275-37206294	None:intergenic	40.0%
!	GATTGATGGTTCAGTGAGAT+TGG	+	chr8_3:37206422-37206441	Msa1287230:five_prime_UTR	40.0%
!!	ACAATGTGCCACTGTACTTT+TGG	-	chr8_3:37206581-37206600	None:intergenic	40.0%
!!	TGGTATATCTGCTTTTCCTG+AGG	+	chr8_3:37206701-37206720	Msa1287230:five_prime_UTR	40.0%
	CCTCACAACAGTATCCAATT+AGG	-	chr8_3:37207066-37207085	None:intergenic	40.0%
	CCTAATTGGATACTGTTGTG+AGG	+	chr8_3:37207063-37207082	Msa1287230:five_prime_UTR	40.0%
	AATTGGATACTGTTGTGAGG+AGG	+	chr8_3:37207066-37207085	Msa1287230:five_prime_UTR	40.0%
	GTGTATGAGTACATGACAAG+AGG	+	chr8_3:37207103-37207122	Msa1287230:CDS	40.0%
	GATACTCTGCTACATTACCA+TGG	+	chr8_3:37207254-37207273	Msa1287230:CDS	40.0%
	AATTGCATTAGGTGCAGCTA+AGG	+	chr8_3:37207291-37207310	Msa1287230:CDS	40.0%
	ATTGCATTAGGTGCAGCTAA+GGG	+	chr8_3:37207292-37207311	Msa1287230:CDS	40.0%
!	ACAGGATGTTTTGCTTGTGA+AGG	+	chr8_3:37207439-37207458	Msa1287230:intron	40.0%
!	CAGGATGTTTTGCTTGTGAA+GGG	+	chr8_3:37207440-37207459	Msa1287230:intron	40.0%
!	TGAAGAATTCGACGTTGGTT+TGG	+	chr8_3:37207465-37207484	Msa1287230:CDS	40.0%
!!	TTGGCTTTTGCAATAAGCAC+TGG	+	chr8_3:37207500-37207519	Msa1287230:CDS	40.0%
!!	ATAAGCACTGGTAGCAGAAT+TGG	+	chr8_3:37207512-37207531	Msa1287230:CDS	40.0%
	TGGACCTAACATTGAACCTT+GGG	+	chr8_3:37207571-37207590	Msa1287230:CDS	40.0%
	ATCTCCCAAGGTTCAATGTT+AGG	-	chr8_3:37207578-37207597	None:intergenic	40.0%
	GAATAGTAAAATACCGCAGC+GGG	-	chr8_3:37207753-37207772	None:intergenic	40.0%
	ATTCTGTCGATGCAGAGATT+TGG	+	chr8_3:37207769-37207788	Msa1287230:CDS	40.0%
	TTCTGTCGATGCAGAGATTT+GGG	+	chr8_3:37207770-37207789	Msa1287230:CDS	40.0%
	CTTGACGTGGATTCTTAATC+AGG	+	chr8_3:37207974-37207993	Msa1287230:exon	40.0%
	TGGATTCCCCACAACAAATC+AGG	+	chr8_3:37204669-37204688	Msa1287230:five_prime_UTR	45.0%
	ACCCAAACCACCTCTATCAT+AGG	-	chr8_3:37205338-37205357	None:intergenic	45.0%
!	TATGATAGAGGTGGTTTGGG+TGG	+	chr8_3:37205337-37205356	Msa1287230:intron	45.0%
!	GCTTCTACTTGCTAGAGACA+AGG	+	chr8_3:37205565-37205584	Msa1287230:five_prime_UTR	45.0%
	TACCATCCAGATGAGTGCAA+AGG	+	chr8_3:37205986-37206005	Msa1287230:five_prime_UTR	45.0%
	TTCCTTTGCACTCATCTGGA+TGG	-	chr8_3:37205991-37206010	None:intergenic	45.0%
	TCTCTTCCTTTGCACTCATC+TGG	-	chr8_3:37205995-37206014	None:intergenic	45.0%
	TGATTGGACTGTCAGATGAG+TGG	+	chr8_3:37206672-37206691	Msa1287230:intron	45.0%
	TGTCAGATGAGTGGTGATTC+TGG	+	chr8_3:37206681-37206700	Msa1287230:intron	45.0%
	GGGTTTGAAGAATTCGACGT+TGG	+	chr8_3:37207460-37207479	Msa1287230:CDS	45.0%
!!	AGAATTCGACGTTGGTTTGG+AGG	+	chr8_3:37207468-37207487	Msa1287230:CDS	45.0%
	CTGGACCTAACATTGAACCT+TGG	+	chr8_3:37207570-37207589	Msa1287230:CDS	45.0%
	TGCACATAAGGAATCTCCCA+AGG	-	chr8_3:37207590-37207609	None:intergenic	45.0%
!	TGTTTGTTAGGGAGGAATGC+AGG	+	chr8_3:37207722-37207741	Msa1287230:intron	45.0%
!!	ATTTAATTGTTATAATTAAT+TGG	+	chr8_3:37206108-37206127	Msa1287230:intron	5.0%
!!	TTTAATTGTTATAATTAATT+GGG	+	chr8_3:37206109-37206128	Msa1287230:intron	5.0%
	AGTGCCAGAGAAGAATTCGC+CGG	+	chr8_3:37204637-37204656	Msa1287230:five_prime_UTR	50.0%
!!	AGGGAGCCTGATTTGTTGTG+GGG	-	chr8_3:37204678-37204697	None:intergenic	50.0%
!!	GAGGGAGCCTGATTTGTTGT+GGG	-	chr8_3:37204679-37204698	None:intergenic	50.0%
	AAACGGACGACAGTGAGAGA+GGG	-	chr8_3:37204702-37204721	None:intergenic	50.0%
	TGGATCGATCAACAGTGGAG+AGG	-	chr8_3:37204849-37204868	None:intergenic	50.0%
	ATTAGGCTAAGTAGCGCTGC+CGG	+	chr8_3:37205660-37205679	Msa1287230:intron	50.0%
!	TGAGGAGGAGCAGATGCTTT+TGG	+	chr8_3:37207081-37207100	Msa1287230:exon	50.0%
	GTACATGACAAGAGGGAGCT+TGG	+	chr8_3:37207111-37207130	Msa1287230:CDS	50.0%
!	GGTTTGGAGGTTGATCGTGT+TGG	+	chr8_3:37207481-37207500	Msa1287230:CDS	50.0%
	TAGTAAAATACCGCAGCGGG+TGG	-	chr8_3:37207750-37207769	None:intergenic	50.0%
	TCGATGCAGAGATTTGGGAG+TGG	+	chr8_3:37207775-37207794	Msa1287230:CDS	50.0%
	TGCAGAGATTTGGGAGTGGA+TGG	+	chr8_3:37207779-37207798	Msa1287230:CDS	50.0%
!!	GGAGGGAGCCTGATTTGTTG+TGG	-	chr8_3:37204680-37204699	None:intergenic	55.0%
	AACGGACGACAGTGAGAGAG+GGG	-	chr8_3:37204701-37204720	None:intergenic	55.0%
	GAAACGGACGACAGTGAGAG+AGG	-	chr8_3:37204703-37204722	None:intergenic	55.0%
!	TAGAGGTGGTTTGGGTGGCT+TGG	+	chr8_3:37205342-37205361	Msa1287230:intron	55.0%
	AATGAGTGCACGGCTGCTGT+TGG	+	chr8_3:37207946-37207965	Msa1287230:CDS	55.0%
	AAAGAGGGGGTCGAGGGAGA+GGG	+	chr8_3:37204576-37204595	Msa1287230:five_prime_UTR	60.0%
	CGTACCGGAGAAGAAGTCGC+CGG	+	chr8_3:37204603-37204622	Msa1287230:five_prime_UTR	60.0%
	GCCAGAGAAGAATTCGCCGG+CGG	+	chr8_3:37204640-37204659	Msa1287230:five_prime_UTR	60.0%
	ACCGCCGGCGAATTCTTCTC+TGG	-	chr8_3:37204644-37204663	None:intergenic	60.0%
	AGAGAAGAATTCGCCGGCGG+TGG	+	chr8_3:37204643-37204662	Msa1287230:five_prime_UTR	60.0%
	GAGAAGAATTCGCCGGCGGT+GGG	+	chr8_3:37204644-37204663	Msa1287230:five_prime_UTR	60.0%
	GACGACAGTGAGAGAGGGGA+GGG	-	chr8_3:37204697-37204716	None:intergenic	60.0%
!!	GCTGTTGGCTTGGCTTGACG+TGG	+	chr8_3:37207961-37207980	Msa1287230:exon	60.0%
	TCGAGGGAAAGAGGGGGTCG+AGG	+	chr8_3:37204569-37204588	Msa1287230:five_prime_UTR	65.0%
	CGAGGGAAAGAGGGGGTCGA+GGG	+	chr8_3:37204570-37204589	Msa1287230:five_prime_UTR	65.0%
	GAAAGAGGGGGTCGAGGGAG+AGG	+	chr8_3:37204575-37204594	Msa1287230:five_prime_UTR	65.0%
	ACCGGAGAAGAAGTCGCCGG+CGG	+	chr8_3:37204606-37204625	Msa1287230:five_prime_UTR	65.0%
	ACCGCCGGCGACTTCTTCTC+CGG	-	chr8_3:37204610-37204629	None:intergenic	65.0%
	GAGAAGAAGTCGCCGGCGGT+GGG	+	chr8_3:37204610-37204629	Msa1287230:five_prime_UTR	65.0%
	GAATTCGCCGGCGGTGGGAT+TGG	+	chr8_3:37204649-37204668	Msa1287230:five_prime_UTR	65.0%
	GGGGAATCCAATCCCACCGC+CGG	-	chr8_3:37204659-37204678	None:intergenic	65.0%
	GGACGACAGTGAGAGAGGGG+AGG	-	chr8_3:37204698-37204717	None:intergenic	65.0%
!	AATGCAGGTGCCACCCGCTG+CGG	+	chr8_3:37207737-37207756	Msa1287230:CDS	65.0%
!	GTGCACGGCTGCTGTTGGCT+TGG	+	chr8_3:37207951-37207970	Msa1287230:CDS	65.0%
	AGGGGGTCGAGGGAGAGGGA+GGG	+	chr8_3:37204580-37204599	Msa1287230:five_prime_UTR	70.0%
!	GAGGGAGAGGGAGGGCGTAC+CGG	+	chr8_3:37204588-37204607	Msa1287230:five_prime_UTR	70.0%
	GGAGAAGAAGTCGCCGGCGG+TGG	+	chr8_3:37204609-37204628	Msa1287230:five_prime_UTR	70.0%
	AAGAAGTCGCCGGCGGTGGG+AGG	+	chr8_3:37204613-37204632	Msa1287230:five_prime_UTR	70.0%
	AGAAGTCGCCGGCGGTGGGA+GGG	+	chr8_3:37204614-37204633	Msa1287230:five_prime_UTR	70.0%
	GAGGGGGTCGAGGGAGAGGG+AGG	+	chr8_3:37204579-37204598	Msa1287230:five_prime_UTR	75.0%
	CTGGCACTCCCTCCCACCGC+CGG	-	chr8_3:37204625-37204644	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_3	gene	37204564	37208038	37204564	ID=Msa1287230;Name=Msa1287230
chr8_3	mRNA	37204564	37208038	37204564	ID=Msa1287230-mRNA-1;Parent=Msa1287230;Name=Msa1287230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=920\|0.85\|0.75\|1\|0.42\|0.37\|8\|60\|196
chr8_3	exon	37204564	37204815	37204564	ID=Msa1287230-mRNA-1:exon:10747;Parent=Msa1287230-mRNA-1
chr8_3	exon	37205472	37205619	37205472	ID=Msa1287230-mRNA-1:exon:10748;Parent=Msa1287230-mRNA-1
chr8_3	exon	37205986	37206054	37205986	ID=Msa1287230-mRNA-1:exon:10749;Parent=Msa1287230-mRNA-1
chr8_3	exon	37206422	37206465	37206422	ID=Msa1287230-mRNA-1:exon:10750;Parent=Msa1287230-mRNA-1
chr8_3	exon	37206687	37207151	37206687	ID=Msa1287230-mRNA-1:exon:10751;Parent=Msa1287230-mRNA-1
chr8_3	exon	37207254	37207345	37207254	ID=Msa1287230-mRNA-1:exon:10752;Parent=Msa1287230-mRNA-1
chr8_3	exon	37207443	37207636	37207443	ID=Msa1287230-mRNA-1:exon:10753;Parent=Msa1287230-mRNA-1
chr8_3	exon	37207732	37208038	37207732	ID=Msa1287230-mRNA-1:exon:10754;Parent=Msa1287230-mRNA-1
chr8_3	five_prime_UTR	37204564	37204815	37204564	ID=Msa1287230-mRNA-1:five_prime_utr;Parent=Msa1287230-mRNA-1
chr8_3	five_prime_UTR	37205472	37205619	37205472	ID=Msa1287230-mRNA-1:five_prime_utr;Parent=Msa1287230-mRNA-1
chr8_3	five_prime_UTR	37205986	37206054	37205986	ID=Msa1287230-mRNA-1:five_prime_utr;Parent=Msa1287230-mRNA-1
chr8_3	five_prime_UTR	37206422	37206465	37206422	ID=Msa1287230-mRNA-1:five_prime_utr;Parent=Msa1287230-mRNA-1
chr8_3	five_prime_UTR	37206687	37207093	37206687	ID=Msa1287230-mRNA-1:five_prime_utr;Parent=Msa1287230-mRNA-1
chr8_3	CDS	37207094	37207151	37207094	ID=Msa1287230-mRNA-1:cds;Parent=Msa1287230-mRNA-1
chr8_3	CDS	37207254	37207345	37207254	ID=Msa1287230-mRNA-1:cds;Parent=Msa1287230-mRNA-1
chr8_3	CDS	37207443	37207636	37207443	ID=Msa1287230-mRNA-1:cds;Parent=Msa1287230-mRNA-1
chr8_3	CDS	37207732	37207978	37207732	ID=Msa1287230-mRNA-1:cds;Parent=Msa1287230-mRNA-1
chr8_3	three_prime_UTR	37207979	37208038	37207979	ID=Msa1287230-mRNA-1:three_prime_utr;Parent=Msa1287230-mRNA-1

Gene Sequence

>Msa1287230

ATGCTTTTGGTGTATGAGTACATGACAAGAGGGAGCTTGGAGAATCAATTGTTCAGAAGATACTCTGCTACATTACCATGGTCAACTAGAATGAAAATTGCATTAGGTGCAGCTAAGGGACTAGCTTTCCTTCATGAAGCAGATAAACTTGATGTTTTGCTTGTGAAGGGTTTGAAGAATTCGACGTTGGTTTGGAGGTTGATCGTGTTGGCTTTTGCAATAAGCACTGGTAGCAGAATTGGTTTTCTAGATATCAATGTTATTCAAATGCCTTTTTCTGGACCTAACATTGAACCTTGGGAGATTCCTTATGTGCATTATCCAAATCACAAAACTTATAGCAGGGAGGAATGCAGGTGCCACCCGCTGCGGTATTTTACTATTCTGTCGATGCAGAGATTTGGGAGTGGATGGTTTGAGACGTTTTTAAATAGTCATCCTAACATAAGCTCAAATGTGGAAATCTTTTCGGTTAAGGTTAGAAGGAGTAATATAACGACAATAACAGAGACTTTGGACACAATTTATAATCTAGACTGGTTTAATGGTGCTTCTAAAAATGAGTGCACGGCTGCTGTTGGCTTGGCTTGA

Protein sequence

>Msa1287230

MLLVYEYMTRGSLENQLFRRYSATLPWSTRMKIALGAAKGLAFLHEADKLDVLLVKGLKNSTLVWRLIVLAFAISTGSRIGFLDINVIQMPFSGPNIEPWEIPYVHYPNHKTYSREECRCHPLRYFTILSMQRFGSGWFETFLNSHPNISSNVEIFSVKVRRSNITTITETLDTIYNLDWFNGASKNECTAAVGLA*