AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0503060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0503060 MtrunA17_Chr3g0093841 97.192 819 23 0 18 836 1 819 0.0 1660
Msa0503060 MtrunA17_Chr1g0176881 31.438 299 179 4 44 326 25 313 8.82e-43 165
Msa0503060 MtrunA17_Chr1g0176881 31.633 294 184 5 209 489 25 314 4.35e-41 160
Msa0503060 MtrunA17_Chr1g0176881 27.517 298 207 4 369 659 25 320 1.13e-33 137
Msa0503060 MtrunA17_Chr1g0176881 35.484 155 96 2 510 663 2 153 7.47e-20 94.7
Msa0503060 MtrunA17_Chr1g0176881 32.143 140 93 1 24 161 174 313 1.22e-17 87.4
Msa0503060 MtrunA17_Chr8g0354231 30.351 313 185 7 529 834 16 302 4.61e-35 135
Msa0503060 MtrunA17_Chr8g0354231 37.589 141 87 1 33 172 11 151 1.41e-26 111
Msa0503060 MtrunA17_Chr8g0354231 38.346 133 81 1 202 333 15 147 4.08e-23 100
Msa0503060 MtrunA17_Chr8g0354231 36.957 138 84 2 359 495 12 147 5.26e-22 97.8
Msa0503060 MtrunA17_Chr3g0113081 20.782 486 333 9 44 479 11 494 3.41e-21 99.0
Msa0503060 MtrunA17_Chr7g0264841 25.497 302 188 5 534 834 38 303 8.02e-21 94.0
Msa0503060 MtrunA17_Chr7g0264841 31.646 158 101 2 37 187 32 189 1.16e-20 93.6
Msa0503060 MtrunA17_Chr7g0264841 31.967 122 82 1 206 326 36 157 9.73e-18 85.1
Msa0503060 MtrunA17_Chr7g0264841 26.761 142 101 2 362 502 32 171 9.64e-15 75.9
Msa0503060 MtrunA17_Chr5g0405761 37.500 120 75 0 208 327 52 171 1.61e-19 90.9
Msa0503060 MtrunA17_Chr5g0405761 28.966 145 94 1 44 188 53 188 9.13e-18 85.5
Msa0503060 MtrunA17_Chr5g0405761 31.967 122 81 1 368 489 52 171 5.75e-15 77.0
Msa0503060 MtrunA17_Chr5g0405761 22.928 362 233 7 473 833 5 321 7.70e-15 76.6
Msa0503060 MtrunA17_Chr2g0302731 36.207 116 68 2 30 139 2 117 5.39e-16 75.1
Msa0503060 MtrunA17_Chr2g0302731 37.374 99 61 1 207 304 19 117 6.58e-15 72.0
Msa0503060 MtrunA17_Chr2g0302731 33.945 109 69 2 361 468 13 119 2.11e-14 70.5
Msa0503060 MtrunA17_Chr4g0051721 29.143 175 120 3 32 202 9 183 5.99e-15 74.3
Msa0503060 MtrunA17_Chr4g0051721 29.771 131 91 1 361 490 14 144 2.28e-11 63.9
Msa0503060 MtrunA17_Chr1g0207381 28.571 175 121 3 32 202 9 183 3.15e-13 72.0
Msa0503060 MtrunA17_Chr1g0207381 23.653 334 228 12 524 834 7 336 6.10e-11 65.1
Msa0503060 MtrunA17_Chr7g0238661 33.333 96 61 2 373 467 1 94 3.65e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0503060 AT2G24960.2 29.829 818 485 18 44 835 15 769 1.03e-105 343
Msa0503060 AT2G24960.2 29.193 483 316 5 198 674 4 466 1.85e-64 231
Msa0503060 AT2G24960.2 32.012 328 203 3 24 332 308 634 1.29e-47 182
Msa0503060 AT2G24960.1 29.013 841 485 19 44 835 15 792 1.32e-100 330
Msa0503060 AT2G24960.1 27.866 506 316 6 198 674 4 489 7.76e-60 218
Msa0503060 AT2G24960.1 29.915 351 203 4 24 332 308 657 2.96e-43 169
Msa0503060 AT4G02210.1 30.126 478 267 13 369 835 14 435 2.67e-58 206
Msa0503060 AT4G02210.1 33.106 293 189 4 43 328 13 305 3.39e-49 180
Msa0503060 AT4G02210.1 28.446 341 217 5 200 523 5 335 6.76e-41 156
Msa0503060 AT4G02210.2 30.126 478 267 13 369 835 14 435 2.67e-58 206
Msa0503060 AT4G02210.2 33.106 293 189 4 43 328 13 305 3.39e-49 180
Msa0503060 AT4G02210.2 28.446 341 217 5 200 523 5 335 6.76e-41 156
Msa0503060 AT4G02550.1 31.090 312 185 5 529 834 16 303 9.30e-37 141
Msa0503060 AT4G02550.1 37.500 136 84 1 38 172 16 151 4.08e-26 110
Msa0503060 AT4G02550.1 37.681 138 79 3 364 496 13 148 4.84e-22 98.2
Msa0503060 AT4G02550.1 37.692 130 80 1 205 333 18 147 2.46e-21 96.3
Msa0503060 AT4G02550.5 31.090 312 185 5 529 834 16 303 9.30e-37 141
Msa0503060 AT4G02550.5 37.500 136 84 1 38 172 16 151 4.08e-26 110
Msa0503060 AT4G02550.5 37.681 138 79 3 364 496 13 148 4.84e-22 98.2
Msa0503060 AT4G02550.5 37.692 130 80 1 205 333 18 147 2.46e-21 96.3
Msa0503060 AT4G02550.3 31.090 312 185 5 529 834 31 318 1.66e-36 140
Msa0503060 AT4G02550.3 37.500 136 84 1 38 172 31 166 6.26e-26 110
Msa0503060 AT4G02550.3 37.984 129 77 2 369 496 37 163 9.25e-22 97.8
Msa0503060 AT4G02550.3 37.692 130 80 1 205 333 33 162 4.62e-21 95.5
Msa0503060 AT4G02550.2 30.293 307 165 4 529 834 16 274 1.46e-33 130
Msa0503060 AT4G02550.2 40.984 122 71 1 38 158 16 137 5.69e-26 108
Msa0503060 AT4G02550.2 37.681 138 79 3 364 496 13 148 2.86e-22 98.2
Msa0503060 AT4G02550.2 37.692 130 80 1 205 333 18 147 1.21e-21 96.3
Msa0503060 AT4G02550.4 30.293 307 165 4 529 834 16 274 1.46e-33 130
Msa0503060 AT4G02550.4 40.984 122 71 1 38 158 16 137 5.69e-26 108
Msa0503060 AT4G02550.4 37.681 138 79 3 364 496 13 148 2.86e-22 98.2
Msa0503060 AT4G02550.4 37.692 130 80 1 205 333 18 147 1.21e-21 96.3
Msa0503060 AT5G05800.1 23.986 296 213 3 43 333 6 294 2.57e-20 95.5
Msa0503060 AT5G05800.1 22.973 296 213 5 209 496 7 295 3.42e-16 82.4
Msa0503060 AT5G05800.1 19.366 284 226 2 369 652 7 287 8.57e-12 68.9
Msa0503060 AT5G05800.5 23.986 296 213 3 43 333 6 294 2.57e-20 95.5
Msa0503060 AT5G05800.5 22.973 296 213 5 209 496 7 295 3.42e-16 82.4
Msa0503060 AT5G05800.5 19.366 284 226 2 369 652 7 287 8.57e-12 68.9
Msa0503060 AT5G05800.3 23.986 296 213 3 43 333 6 294 2.57e-20 95.5
Msa0503060 AT5G05800.3 22.973 296 213 5 209 496 7 295 3.42e-16 82.4
Msa0503060 AT5G05800.3 19.366 284 226 2 369 652 7 287 8.57e-12 68.9
Msa0503060 AT5G05800.2 23.986 296 213 3 43 333 6 294 2.57e-20 95.5
Msa0503060 AT5G05800.2 22.973 296 213 5 209 496 7 295 3.42e-16 82.4
Msa0503060 AT5G05800.2 19.366 284 226 2 369 652 7 287 8.57e-12 68.9
Msa0503060 AT5G05800.4 23.986 296 213 3 43 333 6 294 2.57e-20 95.5
Msa0503060 AT5G05800.4 22.973 296 213 5 209 496 7 295 3.42e-16 82.4
Msa0503060 AT5G05800.4 19.366 284 226 2 369 652 7 287 8.57e-12 68.9
Msa0503060 AT3G11290.2 22.517 302 208 4 43 333 6 292 3.81e-17 85.5
Msa0503060 AT3G11290.2 21.212 297 217 5 363 653 1 286 3.10e-15 79.7
Msa0503060 AT3G11290.1 22.517 302 208 4 43 333 6 292 3.81e-17 85.5
Msa0503060 AT3G11290.1 21.212 297 217 5 363 653 1 286 3.10e-15 79.7
Msa0503060 AT2G29880.1 23.585 318 202 9 523 825 10 301 3.37e-11 65.9

Find 167 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGATGTTCGAATTCTTAA+AGG 0.134276 3_4:+45966119 Msa0503060:CDS
TCCGCCATGAATGCAAAATT+TGG 0.139555 3_4:+45962714 Msa0503060:CDS
TGTCTCATGCTGGATTTAAA+TGG 0.185772 3_4:+45962814 Msa0503060:CDS
TCTTGCCCAGAAGTTCTTTC+AGG 0.231519 3_4:-45965926 None:intergenic
TGATATCCTGAAAGAACTTC+TGG 0.242491 3_4:+45965920 Msa0503060:CDS
CTACGAGTCTGGTATACTTT+TGG 0.269981 3_4:-45961940 None:intergenic
ACTGACAATACAACGGAAAA+AGG 0.283006 3_4:+45966281 Msa0503060:CDS
TTCCCCTTTCCAAGTAGTTT+TGG 0.292285 3_4:-45967793 None:intergenic
GAGCAGTTCTGCACTATCTT+TGG 0.306080 3_4:+45965582 Msa0503060:CDS
AGACTTGGAGGAAGCAGTTT+GGG 0.306974 3_4:+45962181 Msa0503060:CDS
TAGAAAGAAACAGACTAAAC+TGG 0.315270 3_4:-45967762 None:intergenic
AACATGGAATGAATATATTA+AGG 0.326139 3_4:+45966583 Msa0503060:CDS
ACCGAGGAAAATACATAGTA+TGG 0.339128 3_4:+45961992 Msa0503060:CDS
TGTATGGAATGAATATATTA+AGG 0.343920 3_4:+45965998 Msa0503060:CDS
GACTGATGTGCTTGCAGAGC+AGG 0.350521 3_4:+45962038 Msa0503060:CDS
AAAGCATTAAATGAAAAGTT+TGG 0.356406 3_4:+45962120 Msa0503060:CDS
GCTCGGAAAATCTTGGCATC+AGG 0.370189 3_4:-45962405 None:intergenic
AAGACTTGGAGGAAGCAGTT+TGG 0.374506 3_4:+45962180 Msa0503060:CDS
TGCATTGGAAGCTGCTGTGC+AGG 0.375037 3_4:+45965821 Msa0503060:CDS
AGATTGCTATCATAGTTAAC+TGG 0.375879 3_4:-45965678 None:intergenic
CCGCCATGAATGCAAAATTT+GGG 0.378041 3_4:+45962715 Msa0503060:CDS
CCTCAGATGGACAGAGGAAA+TGG 0.383394 3_4:+45962599 Msa0503060:CDS
GCTTCTTCCATGTTCTTAAC+CGG 0.383696 3_4:-45966478 None:intergenic
TTTCCCATAGGGGATTTGTT+TGG 0.383929 3_4:+45962220 Msa0503060:CDS
ATGAGGAAGCTAGTGGAAAT+TGG 0.387039 3_4:+45967133 Msa0503060:CDS
TATGAGGTGGACAAGTGATA+TGG 0.390129 3_4:+45965719 Msa0503060:CDS
GGACTTTGCTCGGAAAATCT+TGG 0.390570 3_4:-45962412 None:intergenic
TCCATCTGAGGTGCTTAGTC+AGG 0.390971 3_4:-45962587 None:intergenic
CAGGGTTCATCTGAGCAAAC+AGG 0.391656 3_4:+45967351 Msa0503060:CDS
TCTGCATTCTCTACAAAGTT+AGG 0.392861 3_4:-45967192 None:intergenic
CGTGGTTAATGTAGTTAAGA+AGG 0.393396 3_4:+45967672 Msa0503060:exon
ATAGAGAACTTCAACGAGTT+AGG 0.401609 3_4:+45967096 Msa0503060:CDS
CAACATGGATTGACTACATC+CGG 0.415622 3_4:+45962871 Msa0503060:CDS
GTCATTCCAAACAGAATCAT+TGG 0.416770 3_4:-45962268 None:intergenic
GACTTACCGTGCTAGGGTCC+TGG 0.419215 3_4:+45965551 Msa0503060:CDS
CCTTTAAGAATTCGAACATC+AGG 0.419302 3_4:-45966119 None:intergenic
CTCGTGCAGCAAATTAAACT+TGG 0.426472 3_4:+45965762 Msa0503060:CDS
CATAGTATGGACAAGTGAAA+TGG 0.427038 3_4:+45962005 Msa0503060:CDS
GATCACTGCTCGTGCTAAGA+TGG 0.427644 3_4:+45966205 Msa0503060:CDS
TCAGATAAAATGACAAGATC+TGG 0.428735 3_4:-45962546 None:intergenic
AACGAGTTAGGTTTGATTGT+TGG 0.432874 3_4:+45967108 Msa0503060:CDS
GATGCAAAGGCTCATTGAAA+TGG 0.433824 3_4:-45965605 None:intergenic
GTCTCATGCTGGATTTAAAT+GGG 0.434237 3_4:+45962815 Msa0503060:CDS
GCACGGTAAGTCCTTGCATC+TGG 0.435678 3_4:-45965540 None:intergenic
GCTTGCAGAGCAGGTGGAAA+AGG 0.440693 3_4:+45962047 Msa0503060:CDS
CTTGTCAAGCAAGTGATGTT+GGG 0.443237 3_4:+45966353 Msa0503060:CDS
CTTCATCAATTGCATTATCA+TGG 0.444381 3_4:-45967326 None:intergenic
CTTGCAGAGCAGGTGGAAAA+GGG 0.446931 3_4:+45962048 Msa0503060:CDS
AGTGCAGCGGCAAATGCTGC+CGG 0.447207 3_4:-45962096 None:intergenic
ATGCAGCAGGTCTTAGTTTG+TGG 0.451572 3_4:-45965803 None:intergenic
GAGAAAGCATTTCCTTCATA+AGG 0.452295 3_4:-45966508 None:intergenic
GATTACAGATGATAATGTTA+TGG 0.457865 3_4:+45966232 Msa0503060:CDS
TATTCCAAACAAATCCCCTA+TGG 0.461311 3_4:-45962224 None:intergenic
TCATTCGCTGACATCGGTGT+TGG 0.462864 3_4:-45967291 None:intergenic
CAAACTAAGACCTGCTGCAT+TGG 0.470974 3_4:+45965806 Msa0503060:CDS
AAGGAACAAAACTGCGTGCT+TGG 0.471049 3_4:+45967497 Msa0503060:CDS
AAGTATCATAGTGTGTTGTC+TGG 0.471644 3_4:+45961901 Msa0503060:CDS
TTGTGGCCAATGATTCTGTT+TGG 0.472899 3_4:+45962262 Msa0503060:CDS
GAAGGAACTCATTTCCCATA+GGG 0.476655 3_4:+45962209 Msa0503060:CDS
ATATAGAAACCAAAACTACT+TGG 0.479383 3_4:+45967784 Msa0503060:three_prime_UTR
TCTTGTCAAGCAAGTGATGT+TGG 0.482747 3_4:+45966352 Msa0503060:CDS
TCGGATAGCCGATGCATTGA+CGG 0.484279 3_4:+45967473 Msa0503060:CDS
TGTGACATGGACAGATGAAA+TGG 0.487484 3_4:+45966310 Msa0503060:CDS
ATGCAAGGACTTACCGTGCT+AGG 0.489191 3_4:+45965544 Msa0503060:CDS
GCTACAAATGATGAATGTTA+TGG 0.489207 3_4:+45967437 Msa0503060:CDS
AAACCAAAACTACTTGGAAA+GGG 0.489308 3_4:+45967790 Msa0503060:three_prime_UTR
CCGTTGTATTGTCAGTTCCA+TGG 0.490047 3_4:-45966274 None:intergenic
CAGCAGTAGAGCTACGAGTC+TGG 0.490478 3_4:-45961951 None:intergenic
GATATCCTGAAAGAACTTCT+GGG 0.492221 3_4:+45965921 Msa0503060:CDS
TTGGAATAAGACACAAAAGA+TGG 0.498567 3_4:+45962239 Msa0503060:CDS
AACTGCGTGCTTGGAGGAAG+TGG 0.499688 3_4:+45967506 Msa0503060:CDS
GAGGAGCTGTGCATAATCAT+TGG 0.501824 3_4:+45966161 Msa0503060:CDS
GCTCTGCAAGCACATCAGTC+AGG 0.503069 3_4:-45962035 None:intergenic
TCGTAGATCAAGTGAGGAAA+GGG 0.503673 3_4:+45962643 Msa0503060:CDS
TTTGGCATGCATATGACAAA+AGG 0.503730 3_4:+45962138 Msa0503060:CDS
AAGATGTAATGAAGCATATG+AGG 0.505103 3_4:+45965703 Msa0503060:CDS
GTTCCTTTCCGTCAATGCAT+CGG 0.506236 3_4:-45967481 None:intergenic
ATGAGATCGTCATCAAAGTC+GGG 0.508938 3_4:-45967549 None:intergenic
GAACAAAACTGCGTGCTTGG+AGG 0.509610 3_4:+45967500 Msa0503060:CDS
AGAACTGCTCATAGTTCTCC+AGG 0.509665 3_4:-45965569 None:intergenic
TTCCTCGGTCTGTAGCTCCT+CGG 0.513199 3_4:-45961978 None:intergenic
TAGCCGATGCATTGACGGAA+AGG 0.514422 3_4:+45967478 Msa0503060:CDS
ACAGCAGCTTCCAATGCAGC+AGG 0.515678 3_4:-45965816 None:intergenic
GAAACCAAAACTACTTGGAA+AGG 0.517803 3_4:+45967789 Msa0503060:three_prime_UTR
GAGGAAATGGATCACTGGCT+TGG 0.518992 3_4:+45962612 Msa0503060:CDS
TTATCTGAAACACAAACTGA+TGG 0.520424 3_4:+45962561 Msa0503060:CDS
TGGGCAAGAGTGGCTTCGAA+TGG 0.523735 3_4:+45965940 Msa0503060:CDS
CTCGGAAAATCTTGGCATCA+GGG 0.526005 3_4:-45962404 None:intergenic
AAAATCGGCTGAAGACTTGG+AGG 0.534868 3_4:+45962169 Msa0503060:CDS
TGAAGGAACTCATTTCCCAT+AGG 0.536252 3_4:+45962208 Msa0503060:CDS
TACATCAGCGTGCTCTTCAA+AGG 0.537348 3_4:-45967232 None:intergenic
CCATTTCCTCTGTCCATCTG+AGG 0.542114 3_4:-45962599 None:intergenic
GGGCAAGAGTGGCTTCGAAT+GGG 0.544639 3_4:+45965941 Msa0503060:CDS
TAATGCAATTGATGAAGTGC+AGG 0.545826 3_4:+45967332 Msa0503060:CDS
TCCTCTTCATTCGCTGACAT+CGG 0.546434 3_4:-45967297 None:intergenic
AAGGAAATTCTGTCTCATGC+TGG 0.546619 3_4:+45962804 Msa0503060:CDS
ATCACTGCTCGTGCTAAGAT+GGG 0.546712 3_4:+45966206 Msa0503060:CDS
AGAAAGAAACAGACTAAACT+GGG 0.548616 3_4:-45967761 None:intergenic
GGTGGAAAAGGGGAATAAAG+TGG 0.549835 3_4:+45962059 Msa0503060:CDS
TGCAAGGACTTACCGTGCTA+GGG 0.550347 3_4:+45965545 Msa0503060:CDS
CAATAGAAAACATTAAAAGC+CGG 0.555716 3_4:+45966459 Msa0503060:CDS
GGACAGAGGAAATGGATCAC+TGG 0.557026 3_4:+45962607 Msa0503060:CDS
TTAAAAGCCGGTTAAGAACA+TGG 0.557379 3_4:+45966471 Msa0503060:CDS
CTTGGAGGAAGTGGTTGAAA+AGG 0.558642 3_4:+45967515 Msa0503060:CDS
ACCTGACTAAGCACCTCAGA+TGG 0.560083 3_4:+45962586 Msa0503060:CDS
ATTCCAAACAAATCCCCTAT+GGG 0.560335 3_4:-45962223 None:intergenic
AATGTTATGGCTGCTGATAT+CGG 0.563434 3_4:+45967450 Msa0503060:CDS
CTCGTAGATCAAGTGAGGAA+AGG 0.564355 3_4:+45962642 Msa0503060:CDS
GAAGCAGTATGTCCTTATGA+AGG 0.567185 3_4:+45966496 Msa0503060:CDS
ATGAAGGAAATGCTTTCTCG+TGG 0.569876 3_4:+45966512 Msa0503060:CDS
TCTCTACAAAGTTAGGAGCA+AGG 0.571869 3_4:-45967185 None:intergenic
GAAGGAAATGCTTTCTCGTG+GGG 0.575299 3_4:+45966514 Msa0503060:CDS
AATGAGATCGTCATCAAAGT+CGG 0.575423 3_4:-45967550 None:intergenic
TGTTTGGAATGACTACATCA+AGG 0.575539 3_4:+45962278 Msa0503060:CDS
TGAAGGAAATGCTTTCTCGT+GGG 0.576741 3_4:+45966513 Msa0503060:CDS
AGGTTTGATTGTTGGCAATG+AGG 0.578254 3_4:+45967116 Msa0503060:CDS
ATTCAAAGCAGCCATCAAAA+CGG 0.578397 3_4:+45967394 Msa0503060:CDS
AATTCGAAAGGCTCGTCACA+AGG 0.578854 3_4:-45965642 None:intergenic
AGTGGATAACATCTTGAAGC+CGG 0.582263 3_4:+45962077 Msa0503060:CDS
TTATGTTTCGATGAGAAGAG+AGG 0.583010 3_4:+45967591 Msa0503060:CDS
CCTTTCGAATTTGAAAGTGT+CGG 0.583364 3_4:+45965654 Msa0503060:CDS
ACGAGTCATCAGAAACTATG+AGG 0.585599 3_4:+45966142 Msa0503060:CDS
AAGGAACTCATTTCCCATAG+GGG 0.588405 3_4:+45962210 Msa0503060:CDS
TCATTGCAGATGATTCTGTA+TGG 0.588981 3_4:+45965982 Msa0503060:CDS
GCACGAGCAGTGATCATACC+TGG 0.589570 3_4:-45966197 None:intergenic
ACCGATGTCAGCGAATGAAG+AGG 0.590681 3_4:+45967296 Msa0503060:CDS
CATTTGTAGCATCACATCAT+CGG 0.591675 3_4:-45967424 None:intergenic
TCAGCGTGCTCTTCAAAGGT+AGG 0.596021 3_4:-45967228 None:intergenic
TAAGACACAAAAGATGGTTG+TGG 0.597200 3_4:+45962245 Msa0503060:CDS
GTGGGATGAAGGACGTAAGA+TGG 0.598230 3_4:+45966544 Msa0503060:CDS
TCAGCTTGCTCTTCAAAGTG+AGG 0.600479 3_4:-45967264 None:intergenic
CATCTGAGCAAACAGGGGCA+AGG 0.602114 3_4:+45967358 Msa0503060:CDS
TTCAGAAACATCGAGATGCT+AGG 0.602172 3_4:+45967055 Msa0503060:intron
AACCAAAACTACTTGGAAAG+GGG 0.608058 3_4:+45967791 Msa0503060:three_prime_UTR
AAAGAACTTCTGGGCAAGAG+TGG 0.608647 3_4:+45965930 Msa0503060:CDS
TTATGGCTGCTGATATCGGT+CGG 0.613273 3_4:+45967454 Msa0503060:CDS
AACATGGATTGACTACATCC+GGG 0.613940 3_4:+45962872 Msa0503060:CDS
ATGTAATGAAGCATATGAGG+TGG 0.614151 3_4:+45965706 Msa0503060:CDS
ATTTAATGCTTTCAGTGCAG+CGG 0.616263 3_4:-45962109 None:intergenic
AAGGAAATGCTTTCTCGTGG+GGG 0.617396 3_4:+45966515 Msa0503060:CDS
ACAGAGTCATTACGATGCAA+AGG 0.619841 3_4:-45965618 None:intergenic
CCGACACTTTCAAATTCGAA+AGG 0.620394 3_4:-45965654 None:intergenic
GTCAGACACATCCAGATGCA+AGG 0.621676 3_4:+45965529 Msa0503060:intron
TGATGTGCTTGCAGAGCAGG+TGG 0.622701 3_4:+45962041 Msa0503060:CDS
AGGGTTCATCTGAGCAAACA+GGG 0.623988 3_4:+45967352 Msa0503060:CDS
GGAAGCTAGTGGAAATTGGT+CGG 0.628251 3_4:+45967137 Msa0503060:CDS
GACTTGGAGGAAGCAGTTTG+GGG 0.630867 3_4:+45962182 Msa0503060:CDS
GAAACAGTATGAAATAGCAA+AGG 0.634134 3_4:+45962785 Msa0503060:CDS
TCATTGCAAATGATTCAACA+TGG 0.639584 3_4:+45962856 Msa0503060:CDS
GACCGAGGAGCTACAGACCG+AGG 0.639930 3_4:+45961976 Msa0503060:CDS
TTGCAGAGCAGGTGGAAAAG+GGG 0.644663 3_4:+45962049 Msa0503060:CDS
AGTTCTCCAGGACCCTAGCA+CGG 0.650830 3_4:-45965557 None:intergenic
TGCTTTGAATGTGATGACGA+AGG 0.651831 3_4:-45967381 None:intergenic
ATTGGTCACATTGATCCACC+AGG 0.656274 3_4:+45966179 Msa0503060:CDS
GTTGGCAATGAGGAAGCTAG+TGG 0.659048 3_4:+45967126 Msa0503060:CDS
AGATTCTCGTAGATCAAGTG+AGG 0.663269 3_4:+45962637 Msa0503060:CDS
CCATGGAACTGACAATACAA+CGG 0.668437 3_4:+45966274 Msa0503060:CDS
GCTCAAGAGACAAATTACCA+TGG 0.670220 3_4:+45966257 Msa0503060:CDS
TAGAGTAGCTATGTAAGCTG+AGG 0.672740 3_4:-45966402 None:intergenic
CGAGCAGTGATCATACCTGG+TGG 0.692590 3_4:-45966194 None:intergenic
TTGTTGCAACTGATTCAACA+TGG 0.692620 3_4:+45966567 Msa0503060:CDS
AGCTCTACTGCTGTAGACCG+AGG 0.701306 3_4:+45961961 Msa0503060:CDS
AATGCAATTGATGAAGTGCA+GGG 0.713782 3_4:+45967333 Msa0503060:CDS
TAAGCACCTCAGATGGACAG+AGG 0.715946 3_4:+45962593 Msa0503060:CDS
GGGTTCATCTGAGCAAACAG+GGG 0.721870 3_4:+45967353 Msa0503060:CDS
TGGTTGTTGAAACGTTTGCG+TGG 0.732707 3_4:+45967654 Msa0503060:CDS
GAAAGAAACAGACTAAACTG+GGG 0.743219 3_4:-45967760 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTAAATAAAAACTAG+AGG - chr3_4:45963335-45963354 None:intergenic 10.0%
!!! ATTAAATATAATTGTCATTT+TGG - chr3_4:45963794-45963813 None:intergenic 10.0%
!! ACAGAAAACTATAAATTAAT+GGG - chr3_4:45962334-45962353 None:intergenic 15.0%
!! AACAGAAAACTATAAATTAA+TGG - chr3_4:45962335-45962354 None:intergenic 15.0%
!!! TAATTTATCATAGTTTTCAA+TGG - chr3_4:45962436-45962455 None:intergenic 15.0%
!!! ATAAATATTTTGTAAACCAT+TGG - chr3_4:45962936-45962955 None:intergenic 15.0%
!! TCTCATTAATGAAATTAATT+TGG + chr3_4:45963079-45963098 Msa0503060:intron 15.0%
!!! AATTAATTTGGAATGAAATA+AGG + chr3_4:45963091-45963110 Msa0503060:intron 15.0%
!!! TCTGTTGATTTTAAATTATT+AGG + chr3_4:45963576-45963595 Msa0503060:intron 15.0%
!!! TTAAATTAGAAAGTTTTTGT+TGG + chr3_4:45963661-45963680 Msa0503060:intron 15.0%
!! TATTGAAAAATTGTAAATTG+TGG + chr3_4:45963741-45963760 Msa0503060:intron 15.0%
!! ATTGAAAAATTGTAAATTGT+GGG + chr3_4:45963742-45963761 Msa0503060:intron 15.0%
!! AAATGTTCAAAGAATTATTA+AGG + chr3_4:45964382-45964401 Msa0503060:intron 15.0%
!! ACATATACACTAAATATTAA+CGG + chr3_4:45964665-45964684 Msa0503060:intron 15.0%
!! AAAAAAAAAAAAATCCTATC+AGG - chr3_4:45964774-45964793 None:intergenic 15.0%
!!! GATAGGATTTTTTTTTTTTT+TGG + chr3_4:45964774-45964793 Msa0503060:intron 15.0%
!!! TTTTTTTTTTTTGGTGAATA+AGG + chr3_4:45964783-45964802 Msa0503060:intron 15.0%
!! AATACAGAAATAGTAAAATA+CGG - chr3_4:45965399-45965418 None:intergenic 15.0%
!!! TGATTAAAAATTATCACTTT+TGG + chr3_4:45967700-45967719 Msa0503060:intron 15.0%
!! ATTAATGTATTATTTCATCT+TGG + chr3_4:45967725-45967744 Msa0503060:intron 15.0%
!!! AAAGCATTAAATGAAAAGTT+TGG + chr3_4:45962120-45962139 Msa0503060:CDS 20.0%
!! CAGAAAACTATAAATTAATG+GGG - chr3_4:45962333-45962352 None:intergenic 20.0%
!! TTAAAAATCGTCTTAAAACA+TGG + chr3_4:45962760-45962779 Msa0503060:CDS 20.0%
!! AATTTCATTAATGAGAACAA+TGG - chr3_4:45963075-45963094 None:intergenic 20.0%
!!! TCTTTTTTCTATTACTGTTA+AGG + chr3_4:45963202-45963221 Msa0503060:intron 20.0%
!! ATGAAGTTATACAGTAAAAT+TGG + chr3_4:45963264-45963283 Msa0503060:intron 20.0%
!!! TGCTACATATAATTTTCTTT+GGG - chr3_4:45963501-45963520 None:intergenic 20.0%
!!! TTGCTACATATAATTTTCTT+TGG - chr3_4:45963502-45963521 None:intergenic 20.0%
!!! AATATAATTGTCATTTTGGT+GGG - chr3_4:45963790-45963809 None:intergenic 20.0%
!!! AAATATAATTGTCATTTTGG+TGG - chr3_4:45963791-45963810 None:intergenic 20.0%
!! GTTATTAAGATGATAAAAAC+TGG + chr3_4:45963917-45963936 Msa0503060:intron 20.0%
!!! CATAGCAAATAACTTATTTT+TGG + chr3_4:45964408-45964427 Msa0503060:intron 20.0%
!! CATATACACTAAATATTAAC+GGG + chr3_4:45964666-45964685 Msa0503060:intron 20.0%
!! GGAAAAATAAAAAATTTCTC+AGG + chr3_4:45964687-45964706 Msa0503060:intron 20.0%
!!! TAAAATACGGCTTTAAATTA+CGG - chr3_4:45965386-45965405 None:intergenic 20.0%
!!! ACTATTTCTGTATTTTTCAT+TGG + chr3_4:45965405-45965424 Msa0503060:intron 20.0%
!! TGTATGGAATGAATATATTA+AGG + chr3_4:45965998-45966017 Msa0503060:CDS 20.0%
!! GACTACTTTAAATTTCTATT+CGG + chr3_4:45966032-45966051 Msa0503060:intron 20.0%
!!! TTAAGCTTATTACATTTTTC+TGG + chr3_4:45966085-45966104 Msa0503060:intron 20.0%
!!! TGTTTTCTATTGTTAAATTC+AGG - chr3_4:45966451-45966470 None:intergenic 20.0%
!! AACATGGAATGAATATATTA+AGG + chr3_4:45966583-45966602 Msa0503060:CDS 20.0%
!!! TTTAGTTTCAGAAGTAATTA+TGG + chr3_4:45966619-45966638 Msa0503060:intron 20.0%
!!! TATTTTTTGTTTGTGCATTT+TGG + chr3_4:45966833-45966852 Msa0503060:intron 20.0%
! CAAAAGGACACATAAAAAAT+CGG + chr3_4:45962154-45962173 Msa0503060:CDS 25.0%
!!! TTGGTACTTAACAGTTTTAA+AGG - chr3_4:45962917-45962936 None:intergenic 25.0%
! TTAAAACTGTTAAGTACCAA+TGG + chr3_4:45962917-45962936 Msa0503060:intron 25.0%
! TAACTTCATCTAAATAGCAT+TGG - chr3_4:45963253-45963272 None:intergenic 25.0%
!!! TAACATCGTAACAAGTTTTT+TGG + chr3_4:45963354-45963373 Msa0503060:intron 25.0%
!!! AACATCGTAACAAGTTTTTT+GGG + chr3_4:45963355-45963374 Msa0503060:intron 25.0%
! TTTCTTTGGGCAATATTAAA+AGG - chr3_4:45963488-45963507 None:intergenic 25.0%
! CACATTAATCTTGAATTTGA+AGG - chr3_4:45963602-45963621 None:intergenic 25.0%
! AATTCAAGATTAATGTGTTC+CGG + chr3_4:45963605-45963624 Msa0503060:intron 25.0%
!! TTCAATATCCAAACGATTTT+AGG - chr3_4:45963728-45963747 None:intergenic 25.0%
! AACTGGACTTAACAATAAAA+AGG + chr3_4:45963934-45963953 Msa0503060:intron 25.0%
! ACTGGACTTAACAATAAAAA+GGG + chr3_4:45963935-45963954 Msa0503060:intron 25.0%
! ATATGTGACTGTTAATGTAA+TGG - chr3_4:45964651-45964670 None:intergenic 25.0%
!! TTGTTAGTATTGAGTTTCAA+TGG - chr3_4:45964816-45964835 None:intergenic 25.0%
! AAGACTGTTAATTATGCAAA+AGG + chr3_4:45965177-45965196 Msa0503060:intron 25.0%
! AGACTGTTAATTATGCAAAA+GGG + chr3_4:45965178-45965197 Msa0503060:intron 25.0%
! ACTAATTGACAATTCAAACT+TGG + chr3_4:45965210-45965229 Msa0503060:intron 25.0%
! TTAAAAACCGTCTTAAAACA+TGG + chr3_4:45965886-45965905 Msa0503060:CDS 25.0%
!! GATTACAGATGATAATGTTA+TGG + chr3_4:45966232-45966251 Msa0503060:CDS 25.0%
! CAATAGAAAACATTAAAAGC+CGG + chr3_4:45966459-45966478 Msa0503060:CDS 25.0%
! TACATAGAGAAGATAACAAA+TGG - chr3_4:45966737-45966756 None:intergenic 25.0%
!! TTGGTAGCTACTATAATAAT+GGG - chr3_4:45966773-45966792 None:intergenic 25.0%
!! TTTGGTAGCTACTATAATAA+TGG - chr3_4:45966774-45966793 None:intergenic 25.0%
!!! ATACAATCTTTGGTGTATTT+TGG - chr3_4:45966792-45966811 None:intergenic 25.0%
! ATAATCAATCAGGATTATCT+AGG - chr3_4:45967022-45967041 None:intergenic 25.0%
! AGATAATCCTGATTGATTAT+TGG + chr3_4:45967022-45967041 Msa0503060:intron 25.0%
! ATATAGAAACCAAAACTACT+TGG + chr3_4:45967784-45967803 Msa0503060:three_prime_UTR 25.0%
! TCCATACTATGTATTTTCCT+CGG - chr3_4:45961996-45962015 None:intergenic 30.0%
TTGGAATAAGACACAAAAGA+TGG + chr3_4:45962239-45962258 Msa0503060:CDS 30.0%
TCAGATAAAATGACAAGATC+TGG - chr3_4:45962549-45962568 None:intergenic 30.0%
! TTATCTGAAACACAAACTGA+TGG + chr3_4:45962561-45962580 Msa0503060:CDS 30.0%
GAAACAGTATGAAATAGCAA+AGG + chr3_4:45962785-45962804 Msa0503060:CDS 30.0%
TCATTGCAAATGATTCAACA+TGG + chr3_4:45962856-45962875 Msa0503060:CDS 30.0%
!!! AACAGTTTTAAAGGTCGAAT+AGG - chr3_4:45962908-45962927 None:intergenic 30.0%
TCTTCCAAAACAAAAGAGAA+GGG - chr3_4:45962993-45963012 None:intergenic 30.0%
! TTCATTTTGCTACTGCATAA+AGG - chr3_4:45963020-45963039 None:intergenic 30.0%
TGGAATGAAATAAGGTATGT+AGG + chr3_4:45963099-45963118 Msa0503060:intron 30.0%
!!! ACATCGTAACAAGTTTTTTG+GGG + chr3_4:45963356-45963375 Msa0503060:intron 30.0%
AAATGATAATCTGATGCAGA+CGG - chr3_4:45963458-45963477 None:intergenic 30.0%
! TTTAAAATCAACAGAGAGCT+AGG - chr3_4:45963571-45963590 None:intergenic 30.0%
!! ATATCCAAACGATTTTAGGT+AGG - chr3_4:45963724-45963743 None:intergenic 30.0%
TAAATTGTGGGATCTTAACA+TGG + chr3_4:45963754-45963773 Msa0503060:intron 30.0%
AAGGGACAAAAAAGAGAATT+TGG + chr3_4:45963953-45963972 Msa0503060:intron 30.0%
TTGAACATAGATAAGACAAG+AGG - chr3_4:45964104-45964123 None:intergenic 30.0%
!! TTTTGTTTCATTCATGACCA+TGG - chr3_4:45964365-45964384 None:intergenic 30.0%
TTGTACAAAATAACGTATCG+TGG - chr3_4:45964491-45964510 None:intergenic 30.0%
GAAATCGAAGATTGTTTGTT+TGG - chr3_4:45964852-45964871 None:intergenic 30.0%
ATCATCTACAAGAACAGTTA+AGG - chr3_4:45964980-45964999 None:intergenic 30.0%
TTCTTGTAGATGATCCAATT+AGG + chr3_4:45964986-45965005 Msa0503060:intron 30.0%
TCTTGTAGATGATCCAATTA+GGG + chr3_4:45964987-45965006 Msa0503060:intron 30.0%
ATATTTGATCTCTGTAGTTC+TGG + chr3_4:45965085-45965104 Msa0503060:intron 30.0%
TGTTAATTATGCAAAAGGGT+TGG + chr3_4:45965182-45965201 Msa0503060:intron 30.0%
ACACTCATGTTTGAGAAATA+AGG + chr3_4:45965253-45965272 Msa0503060:intron 30.0%
CACTCATGTTTGAGAAATAA+GGG + chr3_4:45965254-45965273 Msa0503060:intron 30.0%
ATGTTTGAGAAATAAGGGAA+GGG + chr3_4:45965259-45965278 Msa0503060:intron 30.0%
CTGACATGATAGAAAAAATG+AGG - chr3_4:45965514-45965533 None:intergenic 30.0%
AGATTGCTATCATAGTTAAC+TGG - chr3_4:45965681-45965700 None:intergenic 30.0%
AAGATGTAATGAAGCATATG+AGG + chr3_4:45965703-45965722 Msa0503060:CDS 30.0%
!!! GTTTCTTCCATGTTTTAAGA+CGG - chr3_4:45962770-45962789 None:intergenic 30.0%
ACACCAAAGATTGTATTTGA+AGG + chr3_4:45966796-45966815 Msa0503060:intron 30.0%
!! TTTTGTTTGTGCATTTTGGT+TGG + chr3_4:45966837-45966856 Msa0503060:intron 30.0%
!!! TTTGTTTGTGCATTTTGGTT+GGG + chr3_4:45966838-45966857 Msa0503060:intron 30.0%
AACACATATATACCAACACA+TGG - chr3_4:45966960-45966979 None:intergenic 30.0%
! ATATATACTTGCGATTAGTC+AGG - chr3_4:45966990-45967009 None:intergenic 30.0%
CTTCATCAATTGCATTATCA+TGG - chr3_4:45967329-45967348 None:intergenic 30.0%
GCTACAAATGATGAATGTTA+TGG + chr3_4:45967437-45967456 Msa0503060:CDS 30.0%
AAGAGAGATTGAGAAAAAAG+TGG + chr3_4:45967634-45967653 Msa0503060:CDS 30.0%
AGAAAGAAACAGACTAAACT+GGG - chr3_4:45967764-45967783 None:intergenic 30.0%
TAGAAAGAAACAGACTAAAC+TGG - chr3_4:45967765-45967784 None:intergenic 30.0%
AAGTATCATAGTGTGTTGTC+TGG + chr3_4:45961901-45961920 Msa0503060:CDS 35.0%
ACCGAGGAAAATACATAGTA+TGG + chr3_4:45961992-45962011 Msa0503060:CDS 35.0%
CATAGTATGGACAAGTGAAA+TGG + chr3_4:45962005-45962024 Msa0503060:CDS 35.0%
ATTTAATGCTTTCAGTGCAG+CGG - chr3_4:45962112-45962131 None:intergenic 35.0%
TTTGGCATGCATATGACAAA+AGG + chr3_4:45962138-45962157 Msa0503060:CDS 35.0%
TAAAAAATCGGCTGAAGACT+TGG + chr3_4:45962166-45962185 Msa0503060:CDS 35.0%
ATTCCAAACAAATCCCCTAT+GGG - chr3_4:45962226-45962245 None:intergenic 35.0%
TATTCCAAACAAATCCCCTA+TGG - chr3_4:45962227-45962246 None:intergenic 35.0%
TAAGACACAAAAGATGGTTG+TGG + chr3_4:45962245-45962264 Msa0503060:CDS 35.0%
GTCATTCCAAACAGAATCAT+TGG - chr3_4:45962271-45962290 None:intergenic 35.0%
! TGTTTGGAATGACTACATCA+AGG + chr3_4:45962278-45962297 Msa0503060:CDS 35.0%
AAAATTCTTACGATACCTGC+AGG + chr3_4:45962377-45962396 Msa0503060:intron 35.0%
!! AGTTTTCAATGGACTTTGCT+CGG - chr3_4:45962425-45962444 None:intergenic 35.0%
! ATGCCCAAATTTTGCATTCA+TGG - chr3_4:45962721-45962740 None:intergenic 35.0%
TGTCTCATGCTGGATTTAAA+TGG + chr3_4:45962814-45962833 Msa0503060:CDS 35.0%
GTCTCATGCTGGATTTAAAT+GGG + chr3_4:45962815-45962834 Msa0503060:CDS 35.0%
!! AGTTCCCTTCTCTTTTGTTT+TGG + chr3_4:45962986-45963005 Msa0503060:intron 35.0%
CTCTTCCAAAACAAAAGAGA+AGG - chr3_4:45962994-45963013 None:intergenic 35.0%
! CTTGCTGTGTAATGCTAAAA+AGG + chr3_4:45963140-45963159 Msa0503060:intron 35.0%
!!! CATCGTAACAAGTTTTTTGG+GGG + chr3_4:45963357-45963376 Msa0503060:intron 35.0%
!!! ATCGTAACAAGTTTTTTGGG+GGG + chr3_4:45963358-45963377 Msa0503060:intron 35.0%
AATGATAATCTGATGCAGAC+GGG - chr3_4:45963457-45963476 None:intergenic 35.0%
GGATAATAGAGTCATGAACA+TGG + chr3_4:45963682-45963701 Msa0503060:intron 35.0%
TGATCCTACCTAAAATCGTT+TGG + chr3_4:45963717-45963736 Msa0503060:intron 35.0%
AGAGTAACAACTAGGATTAG+AGG - chr3_4:45964033-45964052 None:intergenic 35.0%
TACTCGAAAATGTGTGAAAC+CGG + chr3_4:45964169-45964188 Msa0503060:intron 35.0%
!! CAAGTTCAAGTTGTCAATTG+CGG - chr3_4:45964595-45964614 None:intergenic 35.0%
ACTGTTAATGTAATGGTTGG+AGG - chr3_4:45964644-45964663 None:intergenic 35.0%
GTGACTGTTAATGTAATGGT+TGG - chr3_4:45964647-45964666 None:intergenic 35.0%
ATCGAAGATTGTTTGTTTGG+TGG - chr3_4:45964849-45964868 None:intergenic 35.0%
TGTCTCCATCAATCTTCAAT+TGG + chr3_4:45964905-45964924 Msa0503060:intron 35.0%
GTCTCCATCAATCTTCAATT+GGG + chr3_4:45964906-45964925 Msa0503060:intron 35.0%
! TTTCCCCATTTTACAGTGTT+AGG - chr3_4:45964933-45964952 None:intergenic 35.0%
ACACTGTAAAATGGGGAAAA+TGG + chr3_4:45964934-45964953 Msa0503060:intron 35.0%
TAGATGATCCAATTAGGGTT+TGG + chr3_4:45964992-45965011 Msa0503060:intron 35.0%
AGATGATCCAATTAGGGTTT+GGG + chr3_4:45964993-45965012 Msa0503060:intron 35.0%
TTTATGTCCCAAACCCTAAT+TGG - chr3_4:45965003-45965022 None:intergenic 35.0%
! GTGCTACTATTATTGATGGT+GGG - chr3_4:45965029-45965048 None:intergenic 35.0%
! TGTGCTACTATTATTGATGG+TGG - chr3_4:45965030-45965049 None:intergenic 35.0%
! TGCTGTGCTACTATTATTGA+TGG - chr3_4:45965033-45965052 None:intergenic 35.0%
CATGTTTGAGAAATAAGGGA+AGG + chr3_4:45965258-45965277 Msa0503060:intron 35.0%
TGTTTGAGAAATAAGGGAAG+GGG + chr3_4:45965260-45965279 Msa0503060:intron 35.0%
AACAGTTTGCAGTAAGACAT+TGG + chr3_4:45965323-45965342 Msa0503060:intron 35.0%
TGTTTGCAAATAGCTCTTAG+TGG + chr3_4:45965433-45965452 Msa0503060:intron 35.0%
GAACAAGAATTAATGCTGGT+AGG - chr3_4:45965492-45965511 None:intergenic 35.0%
TGAGGAACAAGAATTAATGC+TGG - chr3_4:45965496-45965515 None:intergenic 35.0%
! CCTTTCGAATTTGAAAGTGT+CGG + chr3_4:45965654-45965673 Msa0503060:CDS 35.0%
ATGTAATGAAGCATATGAGG+TGG + chr3_4:45965706-45965725 Msa0503060:CDS 35.0%
TGATATCCTGAAAGAACTTC+TGG + chr3_4:45965920-45965939 Msa0503060:CDS 35.0%
GATATCCTGAAAGAACTTCT+GGG + chr3_4:45965921-45965940 Msa0503060:CDS 35.0%
!! CATCTGCAATGACCATTTTT+CGG - chr3_4:45965974-45965993 None:intergenic 35.0%
TCATTGCAGATGATTCTGTA+TGG + chr3_4:45965982-45966001 Msa0503060:CDS 35.0%
! CCTTTAAGAATTCGAACATC+AGG - chr3_4:45966122-45966141 None:intergenic 35.0%
CCTGATGTTCGAATTCTTAA+AGG + chr3_4:45966119-45966138 Msa0503060:CDS 35.0%
ACTGACAATACAACGGAAAA+AGG + chr3_4:45966281-45966300 Msa0503060:CDS 35.0%
! AAAAAGGAAAGAGTGTGACA+TGG + chr3_4:45966297-45966316 Msa0503060:CDS 35.0%
TTAAAAGCCGGTTAAGAACA+TGG + chr3_4:45966471-45966490 Msa0503060:CDS 35.0%
!! GAGAAAGCATTTCCTTCATA+AGG - chr3_4:45966511-45966530 None:intergenic 35.0%
! TTGTTGCAACTGATTCAACA+TGG + chr3_4:45966567-45966586 Msa0503060:CDS 35.0%
GCTCATTGAATGTCAAGATT+AGG + chr3_4:45966677-45966696 Msa0503060:intron 35.0%
CAAGATTAGGTCATTAAGTC+TGG + chr3_4:45966690-45966709 Msa0503060:intron 35.0%
ACGCCTTCAAATACAATCTT+TGG - chr3_4:45966802-45966821 None:intergenic 35.0%
TACACTATTGAGCACTCATT+GGG - chr3_4:45966910-45966929 None:intergenic 35.0%
ACACAGACCAATAATCAATC+AGG - chr3_4:45967032-45967051 None:intergenic 35.0%
ATAGAGAACTTCAACGAGTT+AGG + chr3_4:45967096-45967115 Msa0503060:CDS 35.0%
AACGAGTTAGGTTTGATTGT+TGG + chr3_4:45967108-45967127 Msa0503060:CDS 35.0%
TCTGCATTCTCTACAAAGTT+AGG - chr3_4:45967195-45967214 None:intergenic 35.0%
TAATGCAATTGATGAAGTGC+AGG + chr3_4:45967332-45967351 Msa0503060:CDS 35.0%
AATGCAATTGATGAAGTGCA+GGG + chr3_4:45967333-45967352 Msa0503060:CDS 35.0%
ATTCAAAGCAGCCATCAAAA+CGG + chr3_4:45967394-45967413 Msa0503060:CDS 35.0%
CATTTGTAGCATCACATCAT+CGG - chr3_4:45967427-45967446 None:intergenic 35.0%
AATGTTATGGCTGCTGATAT+CGG + chr3_4:45967450-45967469 Msa0503060:CDS 35.0%
AATGAGATCGTCATCAAAGT+CGG - chr3_4:45967553-45967572 None:intergenic 35.0%
TTATGTTTCGATGAGAAGAG+AGG + chr3_4:45967591-45967610 Msa0503060:CDS 35.0%
CGTGGTTAATGTAGTTAAGA+AGG + chr3_4:45967672-45967691 Msa0503060:exon 35.0%
GAAAGAAACAGACTAAACTG+GGG - chr3_4:45967763-45967782 None:intergenic 35.0%
GAAACCAAAACTACTTGGAA+AGG + chr3_4:45967789-45967808 Msa0503060:three_prime_UTR 35.0%
! AGTGTGTTGTCTGGATTTTC+AGG + chr3_4:45961910-45961929 Msa0503060:CDS 40.0%
! GTGTGTTGTCTGGATTTTCA+GGG + chr3_4:45961911-45961930 Msa0503060:CDS 40.0%
! CTACGAGTCTGGTATACTTT+TGG - chr3_4:45961943-45961962 None:intergenic 40.0%
AGTGGATAACATCTTGAAGC+CGG + chr3_4:45962077-45962096 Msa0503060:CDS 40.0%
TGAAGGAACTCATTTCCCAT+AGG + chr3_4:45962208-45962227 Msa0503060:CDS 40.0%
GAAGGAACTCATTTCCCATA+GGG + chr3_4:45962209-45962228 Msa0503060:CDS 40.0%
AAGGAACTCATTTCCCATAG+GGG + chr3_4:45962210-45962229 Msa0503060:CDS 40.0%
! TTTCCCATAGGGGATTTGTT+TGG + chr3_4:45962220-45962239 Msa0503060:CDS 40.0%
TTGTGGCCAATGATTCTGTT+TGG + chr3_4:45962262-45962281 Msa0503060:CDS 40.0%
AGATTCTCGTAGATCAAGTG+AGG + chr3_4:45962637-45962656 Msa0503060:CDS 40.0%
TCGTAGATCAAGTGAGGAAA+GGG + chr3_4:45962643-45962662 Msa0503060:CDS 40.0%
TCCGCCATGAATGCAAAATT+TGG + chr3_4:45962714-45962733 Msa0503060:CDS 40.0%
! CCCAAATTTTGCATTCATGG+CGG - chr3_4:45962718-45962737 None:intergenic 40.0%
CCGCCATGAATGCAAAATTT+GGG + chr3_4:45962715-45962734 Msa0503060:CDS 40.0%
AAGGAAATTCTGTCTCATGC+TGG + chr3_4:45962804-45962823 Msa0503060:CDS 40.0%
! CAACATGGATTGACTACATC+CGG + chr3_4:45962871-45962890 Msa0503060:CDS 40.0%
! AACATGGATTGACTACATCC+GGG + chr3_4:45962872-45962891 Msa0503060:CDS 40.0%
CGAATAGGTGAAAACATACC+CGG - chr3_4:45962893-45962912 None:intergenic 40.0%
! ACAGCATCGAATATTTGCAC+AGG + chr3_4:45963170-45963189 Msa0503060:intron 40.0%
!!! TTTTTTGGGGGGTGTATAGT+TGG + chr3_4:45963369-45963388 Msa0503060:intron 40.0%
CGGGATGTCAAATAAAAGGT+GGG - chr3_4:45963438-45963457 None:intergenic 40.0%
ACGGGATGTCAAATAAAAGG+TGG - chr3_4:45963439-45963458 None:intergenic 40.0%
CAGACGGGATGTCAAATAAA+AGG - chr3_4:45963442-45963461 None:intergenic 40.0%
CTGTAACTCTAGTGTTAGCT+AGG - chr3_4:45964007-45964026 None:intergenic 40.0%
ATGAACAGTTATGAGACGAG+AGG - chr3_4:45964057-45964076 None:intergenic 40.0%
GATAAGACAAGAGGCAAAGT+GGG - chr3_4:45964095-45964114 None:intergenic 40.0%
AGATAAGACAAGAGGCAAAG+TGG - chr3_4:45964096-45964115 None:intergenic 40.0%
ACTCGAAAATGTGTGAAACC+GGG + chr3_4:45964170-45964189 Msa0503060:intron 40.0%
TCGTATCAGTGCTAAGATCA+TGG - chr3_4:45964318-45964337 None:intergenic 40.0%
!! TCTTAGCACTGATACGATTG+AGG + chr3_4:45964321-45964340 Msa0503060:intron 40.0%
!! CTTAGCACTGATACGATTGA+GGG + chr3_4:45964322-45964341 Msa0503060:intron 40.0%
AGAAAAACGTGTGAGAACCA+TGG + chr3_4:45964345-45964364 Msa0503060:intron 40.0%
TTGTCAAATAGCGCCTATCT+TGG + chr3_4:45964515-45964534 Msa0503060:intron 40.0%
TGCGGATCGTGGAAAAAAAA+TGG - chr3_4:45964577-45964596 None:intergenic 40.0%
! ATGCATATCTGAAGCCTGAT+AGG + chr3_4:45964757-45964776 Msa0503060:intron 40.0%
!! GAAATCGATGAGAGCATCTT+TGG - chr3_4:45964882-45964901 None:intergenic 40.0%
AGGACCCAATTGAAGATTGA+TGG - chr3_4:45964913-45964932 None:intergenic 40.0%
TGGGTCCTAACACTGTAAAA+TGG + chr3_4:45964925-45964944 Msa0503060:intron 40.0%
GGGTCCTAACACTGTAAAAT+GGG + chr3_4:45964926-45964945 Msa0503060:intron 40.0%
GGTCCTAACACTGTAAAATG+GGG + chr3_4:45964927-45964946 Msa0503060:intron 40.0%
GGGGCAATATTATAGTTGCT+TGG + chr3_4:45965279-45965298 Msa0503060:intron 40.0%
TTTGCAGTAAGACATTGGAG+AGG + chr3_4:45965328-45965347 Msa0503060:intron 40.0%
GATGCAAAGGCTCATTGAAA+TGG - chr3_4:45965608-45965627 None:intergenic 40.0%
ACAGAGTCATTACGATGCAA+AGG - chr3_4:45965621-45965640 None:intergenic 40.0%
CCGACACTTTCAAATTCGAA+AGG - chr3_4:45965657-45965676 None:intergenic 40.0%
TATGAGGTGGACAAGTGATA+TGG + chr3_4:45965719-45965738 Msa0503060:CDS 40.0%
CTCGTGCAGCAAATTAAACT+TGG + chr3_4:45965762-45965781 Msa0503060:CDS 40.0%
ATGGGATGAGAACCGAAAAA+TGG + chr3_4:45965959-45965978 Msa0503060:CDS 40.0%
ACGAGTCATCAGAAACTATG+AGG + chr3_4:45966142-45966161 Msa0503060:CDS 40.0%
GCTCAAGAGACAAATTACCA+TGG + chr3_4:45966257-45966276 Msa0503060:CDS 40.0%
CCATGGAACTGACAATACAA+CGG + chr3_4:45966274-45966293 Msa0503060:CDS 40.0%
TGTGACATGGACAGATGAAA+TGG + chr3_4:45966310-45966329 Msa0503060:CDS 40.0%
TCTTGTCAAGCAAGTGATGT+TGG + chr3_4:45966352-45966371 Msa0503060:CDS 40.0%
CTTGTCAAGCAAGTGATGTT+GGG + chr3_4:45966353-45966372 Msa0503060:CDS 40.0%
TAGAGTAGCTATGTAAGCTG+AGG - chr3_4:45966405-45966424 None:intergenic 40.0%
GCTTCTTCCATGTTCTTAAC+CGG - chr3_4:45966481-45966500 None:intergenic 40.0%
GAAGCAGTATGTCCTTATGA+AGG + chr3_4:45966496-45966515 Msa0503060:CDS 40.0%
ATGAAGGAAATGCTTTCTCG+TGG + chr3_4:45966512-45966531 Msa0503060:CDS 40.0%
TGAAGGAAATGCTTTCTCGT+GGG + chr3_4:45966513-45966532 Msa0503060:CDS 40.0%
CTACACTATTGAGCACTCAT+TGG - chr3_4:45966911-45966930 None:intergenic 40.0%
TTCAGAAACATCGAGATGCT+AGG + chr3_4:45967055-45967074 Msa0503060:intron 40.0%
AGGTTTGATTGTTGGCAATG+AGG + chr3_4:45967116-45967135 Msa0503060:CDS 40.0%
ATGAGGAAGCTAGTGGAAAT+TGG + chr3_4:45967133-45967152 Msa0503060:CDS 40.0%
TCTCTACAAAGTTAGGAGCA+AGG - chr3_4:45967188-45967207 None:intergenic 40.0%
! TGCTTTGAATGTGATGACGA+AGG - chr3_4:45967384-45967403 None:intergenic 40.0%
ATGAGATCGTCATCAAAGTC+GGG - chr3_4:45967552-45967571 None:intergenic 40.0%
GGTGGAAAAGGGGAATAAAG+TGG + chr3_4:45962059-45962078 Msa0503060:CDS 45.0%
AAAATCGGCTGAAGACTTGG+AGG + chr3_4:45962169-45962188 Msa0503060:CDS 45.0%
AAGACTTGGAGGAAGCAGTT+TGG + chr3_4:45962180-45962199 Msa0503060:CDS 45.0%
AGACTTGGAGGAAGCAGTTT+GGG + chr3_4:45962181-45962200 Msa0503060:CDS 45.0%
!! GAAGCAGTTTGGGGTTTTGA+AGG + chr3_4:45962191-45962210 Msa0503060:CDS 45.0%
CTCGGAAAATCTTGGCATCA+GGG - chr3_4:45962407-45962426 None:intergenic 45.0%
GGACTTTGCTCGGAAAATCT+TGG - chr3_4:45962415-45962434 None:intergenic 45.0%
CTCGTAGATCAAGTGAGGAA+AGG + chr3_4:45962642-45962661 Msa0503060:CDS 45.0%
AGATTAATGTGTTCCGGCCT+TGG + chr3_4:45963611-45963630 Msa0503060:intron 45.0%
AGGTTTCTCACGTGGGAATT+GGG - chr3_4:45963987-45964006 None:intergenic 45.0%
TAGGTTTCTCACGTGGGAAT+TGG - chr3_4:45963988-45964007 None:intergenic 45.0%
GTTAGCTAGGTTTCTCACGT+GGG - chr3_4:45963994-45964013 None:intergenic 45.0%
TGTTAGCTAGGTTTCTCACG+TGG - chr3_4:45963995-45964014 None:intergenic 45.0%
! TGTGTGAAACCGGGTTGAAA+AGG + chr3_4:45964179-45964198 Msa0503060:intron 45.0%
GTGGAAGATCACGAGATCTT+GGG - chr3_4:45964279-45964298 None:intergenic 45.0%
AGTGGAAGATCACGAGATCT+TGG - chr3_4:45964280-45964299 None:intergenic 45.0%
GATCTCGTGATCTTCCACTA+TGG + chr3_4:45964281-45964300 Msa0503060:intron 45.0%
TCGTGATCTTCCACTATGGA+CGG + chr3_4:45964285-45964304 Msa0503060:intron 45.0%
TGAGCAGTGTTCTTCAATCG+CGG + chr3_4:45964444-45964463 Msa0503060:intron 45.0%
AAGTTGTCAATTGCGGATCG+TGG - chr3_4:45964588-45964607 None:intergenic 45.0%
!! ATCGATGAGAGCATCTTTGG+TGG - chr3_4:45964879-45964898 None:intergenic 45.0%
AAAATGGCGAGTTCTGCGTA+AGG + chr3_4:45964950-45964969 Msa0503060:intron 45.0%
AGACATTGGAGAGGATGTGA+TGG + chr3_4:45965337-45965356 Msa0503060:intron 45.0%
GACATTGGAGAGGATGTGAT+GGG + chr3_4:45965338-45965357 Msa0503060:intron 45.0%
AGAACTGCTCATAGTTCTCC+AGG - chr3_4:45965572-45965591 None:intergenic 45.0%
GAGCAGTTCTGCACTATCTT+TGG + chr3_4:45965582-45965601 Msa0503060:CDS 45.0%
AATTCGAAAGGCTCGTCACA+AGG - chr3_4:45965645-45965664 None:intergenic 45.0%
! ATGCAGCAGGTCTTAGTTTG+TGG - chr3_4:45965806-45965825 None:intergenic 45.0%
CAAACTAAGACCTGCTGCAT+TGG + chr3_4:45965806-45965825 Msa0503060:CDS 45.0%
TCTTGCCCAGAAGTTCTTTC+AGG - chr3_4:45965929-45965948 None:intergenic 45.0%
AAAGAACTTCTGGGCAAGAG+TGG + chr3_4:45965930-45965949 Msa0503060:CDS 45.0%
GAGGAGCTGTGCATAATCAT+TGG + chr3_4:45966161-45966180 Msa0503060:CDS 45.0%
ATTGGTCACATTGATCCACC+AGG + chr3_4:45966179-45966198 Msa0503060:CDS 45.0%
ATCACTGCTCGTGCTAAGAT+GGG + chr3_4:45966206-45966225 Msa0503060:CDS 45.0%
CCGTTGTATTGTCAGTTCCA+TGG - chr3_4:45966277-45966296 None:intergenic 45.0%
GAAGGAAATGCTTTCTCGTG+GGG + chr3_4:45966514-45966533 Msa0503060:CDS 45.0%
AAGGAAATGCTTTCTCGTGG+GGG + chr3_4:45966515-45966534 Msa0503060:CDS 45.0%
TTGAGCACTCATTGGGACAA+AGG - chr3_4:45966903-45966922 None:intergenic 45.0%
GGAAGCTAGTGGAAATTGGT+CGG + chr3_4:45967137-45967156 Msa0503060:CDS 45.0%
TACATCAGCGTGCTCTTCAA+AGG - chr3_4:45967235-45967254 None:intergenic 45.0%
! TCAGCTTGCTCTTCAAAGTG+AGG - chr3_4:45967267-45967286 None:intergenic 45.0%
TCCTCTTCATTCGCTGACAT+CGG - chr3_4:45967300-45967319 None:intergenic 45.0%
AGGGTTCATCTGAGCAAACA+GGG + chr3_4:45967352-45967371 Msa0503060:CDS 45.0%
TTATGGCTGCTGATATCGGT+CGG + chr3_4:45967454-45967473 Msa0503060:CDS 45.0%
GTTCCTTTCCGTCAATGCAT+CGG - chr3_4:45967484-45967503 None:intergenic 45.0%
AAGGAACAAAACTGCGTGCT+TGG + chr3_4:45967497-45967516 Msa0503060:CDS 45.0%
CTTGGAGGAAGTGGTTGAAA+AGG + chr3_4:45967515-45967534 Msa0503060:CDS 45.0%
TGGTTGTTGAAACGTTTGCG+TGG + chr3_4:45967654-45967673 Msa0503060:CDS 45.0%
!! AAAAAAAAAAAACAAAAAAA+AGG - chr3_4:45963895-45963914 None:intergenic 5.0%
CTTGCAGAGCAGGTGGAAAA+GGG + chr3_4:45962048-45962067 Msa0503060:CDS 50.0%
TTGCAGAGCAGGTGGAAAAG+GGG + chr3_4:45962049-45962068 Msa0503060:CDS 50.0%
GACTTGGAGGAAGCAGTTTG+GGG + chr3_4:45962182-45962201 Msa0503060:CDS 50.0%
GCTCGGAAAATCTTGGCATC+AGG - chr3_4:45962408-45962427 None:intergenic 50.0%
ACCTGACTAAGCACCTCAGA+TGG + chr3_4:45962586-45962605 Msa0503060:CDS 50.0%
! TCCATCTGAGGTGCTTAGTC+AGG - chr3_4:45962590-45962609 None:intergenic 50.0%
TAAGCACCTCAGATGGACAG+AGG + chr3_4:45962593-45962612 Msa0503060:CDS 50.0%
CCATTTCCTCTGTCCATCTG+AGG - chr3_4:45962602-45962621 None:intergenic 50.0%
CCTCAGATGGACAGAGGAAA+TGG + chr3_4:45962599-45962618 Msa0503060:CDS 50.0%
GGACAGAGGAAATGGATCAC+TGG + chr3_4:45962607-45962626 Msa0503060:CDS 50.0%
! GAGGAAATGGATCACTGGCT+TGG + chr3_4:45962612-45962631 Msa0503060:CDS 50.0%
GGGGTGTATAGTTGGATAGC+TGG + chr3_4:45963377-45963396 Msa0503060:intron 50.0%
CTACCCTTCATTGACAGCCA+AGG - chr3_4:45963631-45963650 None:intergenic 50.0%
CTTGGCTGTCAATGAAGGGT+AGG + chr3_4:45963629-45963648 Msa0503060:intron 50.0%
CGAGAGGCAGAGTAACAACT+AGG - chr3_4:45964041-45964060 None:intergenic 50.0%
AAGACAAGAGGCAAAGTGGG+TGG - chr3_4:45964092-45964111 None:intergenic 50.0%
TAAGAATGCGCCTGAGAGAG+AGG - chr3_4:45964151-45964170 None:intergenic 50.0%
!! TGAAAAGGCGCTACTGGTAC+CGG + chr3_4:45964194-45964213 Msa0503060:intron 50.0%
TGTTTGACCTGTTTCCGACC+CGG - chr3_4:45964216-45964235 None:intergenic 50.0%
GGTCGGAAACAGGTCAAACA+GGG + chr3_4:45964216-45964235 Msa0503060:intron 50.0%
! AGCAGTACTTTTCCTCGTGC+TGG - chr3_4:45964256-45964275 None:intergenic 50.0%
CGTGATCTTCCACTATGGAC+GGG + chr3_4:45964286-45964305 Msa0503060:intron 50.0%
CAGTGCTACAACGCCAAGAT+AGG - chr3_4:45964531-45964550 None:intergenic 50.0%
GTTGTAGCACTGTTGTGCAG+TGG + chr3_4:45964539-45964558 Msa0503060:intron 50.0%
GTCAGACACATCCAGATGCA+AGG + chr3_4:45965529-45965548 Msa0503060:intron 50.0%
ATGCAAGGACTTACCGTGCT+AGG + chr3_4:45965544-45965563 Msa0503060:CDS 50.0%
TGCAAGGACTTACCGTGCTA+GGG + chr3_4:45965545-45965564 Msa0503060:CDS 50.0%
GATCACTGCTCGTGCTAAGA+TGG + chr3_4:45966205-45966224 Msa0503060:CDS 50.0%
TTTCTCGTGGGGGATTTGAG+TGG + chr3_4:45966525-45966544 Msa0503060:CDS 50.0%
TTCTCGTGGGGGATTTGAGT+GGG + chr3_4:45966526-45966545 Msa0503060:CDS 50.0%
GTGGGATGAAGGACGTAAGA+TGG + chr3_4:45966544-45966563 Msa0503060:CDS 50.0%
GTTGGCAATGAGGAAGCTAG+TGG + chr3_4:45967126-45967145 Msa0503060:CDS 50.0%
TCAGCGTGCTCTTCAAAGGT+AGG - chr3_4:45967231-45967250 None:intergenic 50.0%
TCATTCGCTGACATCGGTGT+TGG - chr3_4:45967294-45967313 None:intergenic 50.0%
ACCGATGTCAGCGAATGAAG+AGG + chr3_4:45967296-45967315 Msa0503060:CDS 50.0%
CAGGGTTCATCTGAGCAAAC+AGG + chr3_4:45967351-45967370 Msa0503060:CDS 50.0%
GGGTTCATCTGAGCAAACAG+GGG + chr3_4:45967353-45967372 Msa0503060:CDS 50.0%
TCGGATAGCCGATGCATTGA+CGG + chr3_4:45967473-45967492 Msa0503060:CDS 50.0%
! TAGCCGATGCATTGACGGAA+AGG + chr3_4:45967478-45967497 Msa0503060:CDS 50.0%
GAACAAAACTGCGTGCTTGG+AGG + chr3_4:45967500-45967519 Msa0503060:CDS 50.0%
CAGCAGTAGAGCTACGAGTC+TGG - chr3_4:45961954-45961973 None:intergenic 55.0%
AGCTCTACTGCTGTAGACCG+AGG + chr3_4:45961961-45961980 Msa0503060:CDS 55.0%
TTCCTCGGTCTGTAGCTCCT+CGG - chr3_4:45961981-45962000 None:intergenic 55.0%
GCTCTGCAAGCACATCAGTC+AGG - chr3_4:45962038-45962057 None:intergenic 55.0%
GACTGATGTGCTTGCAGAGC+AGG + chr3_4:45962038-45962057 Msa0503060:CDS 55.0%
TGATGTGCTTGCAGAGCAGG+TGG + chr3_4:45962041-45962060 Msa0503060:CDS 55.0%
GCTTGCAGAGCAGGTGGAAA+AGG + chr3_4:45962047-45962066 Msa0503060:CDS 55.0%
CCTTCATTGACAGCCAAGGC+CGG - chr3_4:45963627-45963646 None:intergenic 55.0%
CGGCCTTGGCTGTCAATGAA+GGG + chr3_4:45963625-45963644 Msa0503060:intron 55.0%
! CCAGTAGCGCCTTTTCAACC+CGG - chr3_4:45964191-45964210 None:intergenic 55.0%
!! GAAAAGGCGCTACTGGTACC+GGG + chr3_4:45964195-45964214 Msa0503060:intron 55.0%
GGGTCGGAAACAGGTCAAAC+AGG + chr3_4:45964215-45964234 Msa0503060:intron 55.0%
TGGAATGAGCCCGTCCATAG+TGG - chr3_4:45964298-45964317 None:intergenic 55.0%
GCACGGTAAGTCCTTGCATC+TGG - chr3_4:45965543-45965562 None:intergenic 55.0%
AGTTCTCCAGGACCCTAGCA+CGG - chr3_4:45965560-45965579 None:intergenic 55.0%
ACAGCAGCTTCCAATGCAGC+AGG - chr3_4:45965819-45965838 None:intergenic 55.0%
TGCATTGGAAGCTGCTGTGC+AGG + chr3_4:45965821-45965840 Msa0503060:CDS 55.0%
TGGGCAAGAGTGGCTTCGAA+TGG + chr3_4:45965940-45965959 Msa0503060:CDS 55.0%
GGGCAAGAGTGGCTTCGAAT+GGG + chr3_4:45965941-45965960 Msa0503060:CDS 55.0%
CGAGCAGTGATCATACCTGG+TGG - chr3_4:45966197-45966216 None:intergenic 55.0%
GCACGAGCAGTGATCATACC+TGG - chr3_4:45966200-45966219 None:intergenic 55.0%
GGGGGATTTGAGTGGGATGA+AGG + chr3_4:45966533-45966552 Msa0503060:CDS 55.0%
!! TGGGACAAAGGTGCCCAGTA+CGG - chr3_4:45966891-45966910 None:intergenic 55.0%
CATCTGAGCAAACAGGGGCA+AGG + chr3_4:45967358-45967377 Msa0503060:CDS 55.0%
! TCGGTGCGTCTCCGTTTTGA+TGG - chr3_4:45967408-45967427 None:intergenic 55.0%
AACTGCGTGCTTGGAGGAAG+TGG + chr3_4:45967506-45967525 Msa0503060:CDS 55.0%
AGTGCAGCGGCAAATGCTGC+CGG - chr3_4:45962099-45962118 None:intergenic 60.0%
CCGGCCTTGGCTGTCAATGA+AGG + chr3_4:45963624-45963643 Msa0503060:intron 60.0%
TGAGAGAGAGGCTGAGTGGG+TGG - chr3_4:45964139-45964158 None:intergenic 60.0%
ACCCACTCAGCCTCTCTCTC+AGG + chr3_4:45964138-45964157 Msa0503060:intron 60.0%
GCCTGAGAGAGAGGCTGAGT+GGG - chr3_4:45964142-45964161 None:intergenic 60.0%
!! CCGGGTTGAAAAGGCGCTAC+TGG + chr3_4:45964188-45964207 Msa0503060:intron 60.0%
! ACTGGTACCGGGTCGGAAAC+AGG + chr3_4:45964206-45964225 Msa0503060:intron 60.0%
AGATGCGCGAAACCAGCACG+AGG + chr3_4:45964241-45964260 Msa0503060:intron 60.0%
GACTTACCGTGCTAGGGTCC+TGG + chr3_4:45965551-45965570 Msa0503060:CDS 60.0%
CAACACATGGTGCACCGTGC+AGG - chr3_4:45966947-45966966 None:intergenic 60.0%
CTGCACGGTGCACCATGTGT+TGG + chr3_4:45966945-45966964 Msa0503060:intron 60.0%
GACCGAGGAGCTACAGACCG+AGG + chr3_4:45961976-45961995 Msa0503060:CDS 65.0%
! TGGCATCAGGGTGCTCCTGC+AGG - chr3_4:45962395-45962414 None:intergenic 65.0%
CGCCTGAGAGAGAGGCTGAG+TGG - chr3_4:45964143-45964162 None:intergenic 65.0%
! AGGCGCTACTGGTACCGGGT+CGG + chr3_4:45964199-45964218 Msa0503060:intron 65.0%
GACACTCGCACGCTCCTGCA+CGG + chr3_4:45966930-45966949 Msa0503060:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 45961883 45967812 45961883 ID=Msa0503060;Name=Msa0503060
chr3_4 mRNA 45961883 45967812 45961883 ID=Msa0503060-mRNA-1;Parent=Msa0503060;Name=Msa0503060-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|1|0.83|1|0.8|0.66|6|80|836
chr3_4 exon 45961883 45962299 45961883 ID=Msa0503060-mRNA-1:exon:9796;Parent=Msa0503060-mRNA-1
chr3_4 exon 45962399 45962893 45962399 ID=Msa0503060-mRNA-1:exon:9797;Parent=Msa0503060-mRNA-1
chr3_4 exon 45965534 45966019 45965534 ID=Msa0503060-mRNA-1:exon:9798;Parent=Msa0503060-mRNA-1
chr3_4 exon 45966113 45966604 45966113 ID=Msa0503060-mRNA-1:exon:9799;Parent=Msa0503060-mRNA-1
chr3_4 exon 45967060 45967698 45967060 ID=Msa0503060-mRNA-1:exon:9800;Parent=Msa0503060-mRNA-1
chr3_4 exon 45967751 45967812 45967751 ID=Msa0503060-mRNA-1:exon:9801;Parent=Msa0503060-mRNA-1
chr3_4 CDS 45961883 45962299 45961883 ID=Msa0503060-mRNA-1:cds;Parent=Msa0503060-mRNA-1
chr3_4 CDS 45962399 45962893 45962399 ID=Msa0503060-mRNA-1:cds;Parent=Msa0503060-mRNA-1
chr3_4 CDS 45965534 45966019 45965534 ID=Msa0503060-mRNA-1:cds;Parent=Msa0503060-mRNA-1
chr3_4 CDS 45966113 45966604 45966113 ID=Msa0503060-mRNA-1:cds;Parent=Msa0503060-mRNA-1
chr3_4 CDS 45967060 45967680 45967060 ID=Msa0503060-mRNA-1:cds;Parent=Msa0503060-mRNA-1
chr3_4 three_prime_UTR 45967681 45967698 45967681 ID=Msa0503060-mRNA-1:three_prime_utr;Parent=Msa0503060-mRNA-1
chr3_4 three_prime_UTR 45967751 45967812 45967751 ID=Msa0503060-mRNA-1:three_prime_utr;Parent=Msa0503060-mRNA-1
Gene Sequence

>Msa0503060

TTGGTACACAAGAAGAAGAAGTATCATAGTGTGTTGTCTGGATTTTCAGGGATGCATCCAAAAGTATACCAGACTCGTAGCTCTACTGCTGTAGACCGAGGAGCTACAGACCGAGGAAAATACATAGTATGGACAAGTGAAATGGACAATTGCCTGACTGATGTGCTTGCAGAGCAGGTGGAAAAGGGGAATAAAGTGGATAACATCTTGAAGCCGGCAGCATTTGCCGCTGCACTGAAAGCATTAAATGAAAAGTTTGGCATGCATATGACAAAAGGACACATAAAAAATCGGCTGAAGACTTGGAGGAAGCAGTTTGGGGTTTTGAAGGAACTCATTTCCCATAGGGGATTTGTTTGGAATAAGACACAAAAGATGGTTGTGGCCAATGATTCTGTTTGGAATGACTACATCAAGGAGCACCCTGATGCCAAGATTTTCCGAGCAAAGTCCATTGAAAACTATGATAAATTATGTATTATTCTTGAAAGTGATCAATCAATTGCAAGATTTTCTGACAATGTTACTGAAATTGATGTAAACTTCACAGTTGATGACGAAGAGCCAGATCTTGTCATTTTATCTGAAACACAAACTGATGGAAACCTGACTAAGCACCTCAGATGGACAGAGGAAATGGATCACTGGCTTGGAAAGATTCTCGTAGATCAAGTGAGGAAAGGGCTTAAAATAGATAATGTCTTTCAGACAGAAGCATATGACAAAGCTGTTTCCGCCATGAATGCAAAATTTGGGCATCATCTAACAAAATTTCACATTAAAAATCGTCTTAAAACATGGAAGAAACAGTATGAAATAGCAAAGGAAATTCTGTCTCATGCTGGATTTAAATGGGACGAAACAAAGAAAATGATCATTGCAAATGATTCAACATGGATTGACTACATCCGGACACATCCAGATGCAAGGACTTACCGTGCTAGGGTCCTGGAGAACTATGAGCAGTTCTGCACTATCTTTGGCCATTTCAATGAGCCTTTGCATCGTAATGACTCTGTGCCTTGTGACGAGCCTTTCGAATTTGAAAGTGTCGGTCCAGTTAACTATGATAGCAATCTTAAAGATGTAATGAAGCATATGAGGTGGACAAGTGATATGGACAGCTGTTTAAGTGAGATTCTCGTGCAGCAAATTAAACTTGGTAACAGAAGCAGATTTGACCACAAACTAAGACCTGCTGCATTGGAAGCTGCTGTGCAGGCTATTAATGAAAAGTTTAAGCTTTATATGTCAAAAGATCATATTAAAAACCGTCTTAAAACATGGAAGAAACAATATGATATCCTGAAAGAACTTCTGGGCAAGAGTGGCTTCGAATGGGATGAGAACCGAAAAATGGTCATTGCAGATGATTCTGTATGGAATGAATATATTAAGATAAATCCTGATGTTCGAATTCTTAAAGGACGAGTCATCAGAAACTATGAGGAGCTGTGCATAATCATTGGTCACATTGATCCACCAGGTATGATCACTGCTCGTGCTAAGATGGGTATGATTACAGATGATAATGTTATGGAAGCTCAAGAGACAAATTACCATGGAACTGACAATACAACGGAAAAAGGAAAGAGTGTGACATGGACAGATGAAATGGATCTTTGCTTGACAGAGCTTCTTGTCAAGCAAGTGATGTTGGGAAATAAGCTTGAGAAAAATTTTAAGACCTCAGCTTACATAGCTACTCTAGCAGTTCTAAATGAGAGATTTGACCTGAATTTAACAATAGAAAACATTAAAAGCCGGTTAAGAACATGGAAGAAGCAGTATGTCCTTATGAAGGAAATGCTTTCTCGTGGGGGATTTGAGTGGGATGAAGGACGTAAGATGGTTGTTGCAACTGATTCAACATGGAATGAATATATTAAGAAACATCGAGATGCTAGGAGTCTGCGAGACAAACGAATAGAGAACTTCAACGAGTTAGGTTTGATTGTTGGCAATGAGGAAGCTAGTGGAAATTGGTCGGAAGACACTGAGATGTTTGATGTAAACCTTGCTCCTAACTTTGTAGAGAATGCAGATGTAAATCTTACTCCTACCTTTGAAGAGCACGCTGATGTAAATATCATTCCTCACTTTGAAGAGCAAGCTGAATCTCCAACACCGATGTCAGCGAATGAAGAGGAGATGAGCCATGATAATGCAATTGATGAAGTGCAGGGTTCATCTGAGCAAACAGGGGCAAGGCCTTCGTCATCACATTCAAAGCAGCCATCAAAACGGAGACGCACCGATGATGTGATGCTACAAATGATGAATGTTATGGCTGCTGATATCGGTCGGATAGCCGATGCATTGACGGAAAGGAACAAAACTGCGTGCTTGGAGGAAGTGGTTGAAAAGGTGCAGAATATTCCCGACTTTGATGACGATCTCATTATTGAAGCTTGTGAATATTTATGTTTCGATGAGAAGAGAGGATTGATGTTTTTGAATTTAAAAGAGAGATTGAGAAAAAAGTGGTTGTTGAAACGTTTGCGTGGTTAA
Protein sequence

>Msa0503060

LVHKKKKYHSVLSGFSGMHPKVYQTRSSTAVDRGATDRGKYIVWTSEMDNCLTDVLAEQVEKGNKVDNILKPAAFAAALKALNEKFGMHMTKGHIKNRLKTWRKQFGVLKELISHRGFVWNKTQKMVVANDSVWNDYIKEHPDAKIFRAKSIENYDKLCIILESDQSIARFSDNVTEIDVNFTVDDEEPDLVILSETQTDGNLTKHLRWTEEMDHWLGKILVDQVRKGLKIDNVFQTEAYDKAVSAMNAKFGHHLTKFHIKNRLKTWKKQYEIAKEILSHAGFKWDETKKMIIANDSTWIDYIRTHPDARTYRARVLENYEQFCTIFGHFNEPLHRNDSVPCDEPFEFESVGPVNYDSNLKDVMKHMRWTSDMDSCLSEILVQQIKLGNRSRFDHKLRPAALEAAVQAINEKFKLYMSKDHIKNRLKTWKKQYDILKELLGKSGFEWDENRKMVIADDSVWNEYIKINPDVRILKGRVIRNYEELCIIIGHIDPPGMITARAKMGMITDDNVMEAQETNYHGTDNTTEKGKSVTWTDEMDLCLTELLVKQVMLGNKLEKNFKTSAYIATLAVLNERFDLNLTIENIKSRLRTWKKQYVLMKEMLSRGGFEWDEGRKMVVATDSTWNEYIKKHRDARSLRDKRIENFNELGLIVGNEEASGNWSEDTEMFDVNLAPNFVENADVNLTPTFEEHADVNIIPHFEEQAESPTPMSANEEEMSHDNAIDEVQGSSEQTGARPSSSHSKQPSKRRRTDDVMLQMMNVMAADIGRIADALTERNKTACLEEVVEKVQNIPDFDDDLIIEACEYLCFDEKRGLMFLNLKERLRKKWLLKRLRG*