Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192990 | XP_039689059.1 | 68.017 | 469 | 126 | 11 | 5 | 468 | 6 | 455 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192990 | sp|Q6GM65|PLAP_XENLA | 33.438 | 320 | 196 | 8 | 7 | 317 | 13 | 324 | 6.10e-38 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192990 | A0A396I8G4 | 67.312 | 465 | 110 | 9 | 5 | 468 | 6 | 429 | 0.0 | 573 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006390 | Msa1192990 | 0.826360 | 2.832042e-54 | -8.615850e-47 |
| Msa0011500 | Msa1192990 | 0.804209 | 2.410661e-49 | -8.615850e-47 |
| Msa0017290 | Msa1192990 | 0.822142 | 2.774335e-53 | -8.615850e-47 |
| Msa0026430 | Msa1192990 | 0.803384 | 3.577149e-49 | -8.615850e-47 |
| Msa0026910 | Msa1192990 | 0.804340 | 2.263655e-49 | -8.615850e-47 |
| Msa0039330 | Msa1192990 | 0.814505 | 1.488998e-51 | -8.615850e-47 |
| Msa0043560 | Msa1192990 | 0.842437 | 2.587152e-58 | -8.615850e-47 |
| Msa0045770 | Msa1192990 | 0.800632 | 1.316089e-48 | -8.615850e-47 |
| Msa0045790 | Msa1192990 | 0.808107 | 3.643608e-50 | -8.615850e-47 |
| Msa0046160 | Msa1192990 | 0.805837 | 1.100922e-49 | -8.615850e-47 |
| Msa0048000 | Msa1192990 | 0.811149 | 8.088129e-51 | -8.615850e-47 |
| Msa0065500 | Msa1192990 | 0.841589 | 4.335235e-58 | -8.615850e-47 |
| Msa0084720 | Msa1192990 | 0.836892 | 7.167245e-57 | -8.615850e-47 |
| Msa0087020 | Msa1192990 | 0.839018 | 2.035760e-57 | -8.615850e-47 |
| Msa0089360 | Msa1192990 | 0.806309 | 8.757346e-50 | -8.615850e-47 |
| Msa0089380 | Msa1192990 | 0.835042 | 2.112240e-56 | -8.615850e-47 |
| Msa0606960 | Msa1192990 | 0.931569 | 3.111285e-94 | -8.615850e-47 |
| Msa0622650 | Msa1192990 | 0.803938 | 2.744990e-49 | -8.615850e-47 |
| Msa0626090 | Msa1192990 | 0.825315 | 5.012893e-54 | -8.615850e-47 |
| Msa0626280 | Msa1192990 | 0.802565 | 5.281260e-49 | -8.615850e-47 |
| Msa0626360 | Msa1192990 | 0.805544 | 1.268217e-49 | -8.615850e-47 |
| Msa0657970 | Msa1192990 | 0.825612 | 4.262918e-54 | -8.615850e-47 |
| Msa0673460 | Msa1192990 | 0.803863 | 2.844958e-49 | -8.615850e-47 |
| Msa0682550 | Msa1192990 | 0.831863 | 1.311284e-55 | -8.615850e-47 |
| Msa0685750 | Msa1192990 | 0.815052 | 1.126089e-51 | -8.615850e-47 |
| Msa0687840 | Msa1192990 | 0.809515 | 1.821318e-50 | -8.615850e-47 |
| Msa0691050 | Msa1192990 | 0.807254 | 5.530710e-50 | -8.615850e-47 |
| Msa0693380 | Msa1192990 | 0.846255 | 2.436742e-59 | -8.615850e-47 |
| Msa0696640 | Msa1192990 | 0.804901 | 1.729363e-49 | -8.615850e-47 |
| Msa0697030 | Msa1192990 | 0.814527 | 1.472278e-51 | -8.615850e-47 |
| Msa0726040 | Msa1192990 | 0.804075 | 2.570380e-49 | -8.615850e-47 |
| Msa0731940 | Msa1192990 | 0.803049 | 4.197010e-49 | -8.615850e-47 |
| Msa0735170 | Msa1192990 | 0.800304 | 1.534359e-48 | -8.615850e-47 |
| Msa0742390 | Msa1192990 | 0.800703 | 1.272536e-48 | -8.615850e-47 |
| Msa0744040 | Msa1192990 | 0.806207 | 9.202055e-50 | -8.615850e-47 |
| Msa0753720 | Msa1192990 | 0.812865 | 3.418884e-51 | -8.615850e-47 |
| Msa0757080 | Msa1192990 | 0.803617 | 3.199830e-49 | -8.615850e-47 |
| Msa0760130 | Msa1192990 | 0.819974 | 8.763309e-53 | -8.615850e-47 |
| Msa0762360 | Msa1192990 | 0.800910 | 1.154425e-48 | -8.615850e-47 |
| Msa0766630 | Msa1192990 | 0.815043 | 1.131656e-51 | -8.615850e-47 |
| Msa0767760 | Msa1192990 | 0.805227 | 1.477858e-49 | -8.615850e-47 |
| Msa0773540 | Msa1192990 | 0.802053 | 6.734353e-49 | -8.615850e-47 |
| Msa0787470 | Msa1192990 | 0.811842 | 5.718668e-51 | -8.615850e-47 |
| Msa0807030 | Msa1192990 | 0.808726 | 2.688507e-50 | -8.615850e-47 |
| Msa0820850 | Msa1192990 | 0.814016 | 1.909087e-51 | -8.615850e-47 |
| Msa0828540 | Msa1192990 | 0.811962 | 5.384602e-51 | -8.615850e-47 |
| Msa0123300 | Msa1192990 | 0.805281 | 1.439737e-49 | -8.615850e-47 |
| Msa0152430 | Msa1192990 | 0.815935 | 7.165327e-52 | -8.615850e-47 |
| Msa0159770 | Msa1192990 | 0.802927 | 4.447596e-49 | -8.615850e-47 |
| Msa0166870 | Msa1192990 | 0.803536 | 3.326187e-49 | -8.615850e-47 |
| Msa0202720 | Msa1192990 | 0.814545 | 1.459212e-51 | -8.615850e-47 |
| Msa0210450 | Msa1192990 | 0.808352 | 3.230445e-50 | -8.615850e-47 |
| Msa0220580 | Msa1192990 | 0.815308 | 9.878626e-52 | -8.615850e-47 |
| Msa0220740 | Msa1192990 | 0.843289 | 1.535519e-58 | -8.615850e-47 |
| Msa0376590 | Msa1192990 | 0.857332 | 1.753876e-62 | -8.615850e-47 |
| Msa0379640 | Msa1192990 | 0.802978 | 4.339640e-49 | -8.615850e-47 |
| Msa0388960 | Msa1192990 | 0.801612 | 8.292162e-49 | -8.615850e-47 |
| Msa0399300 | Msa1192990 | 0.804678 | 1.924859e-49 | -8.615850e-47 |
| Msa0436370 | Msa1192990 | 0.833025 | 6.757411e-56 | -8.615850e-47 |
| Msa0448550 | Msa1192990 | -0.861240 | 1.178714e-63 | -8.615850e-47 |
| Msa0452960 | Msa1192990 | 0.804449 | 2.148752e-49 | -8.615850e-47 |
| Msa0458440 | Msa1192990 | 0.841649 | 4.180310e-58 | -8.615850e-47 |
| Msa0466390 | Msa1192990 | 0.804300 | 2.307837e-49 | -8.615850e-47 |
| Msa0983090 | Msa1192990 | 0.801974 | 6.990136e-49 | -8.615850e-47 |
| Msa0990350 | Msa1192990 | 0.834603 | 2.724334e-56 | -8.615850e-47 |
| Msa1024740 | Msa1192990 | 0.800368 | 1.489609e-48 | -8.615850e-47 |
| Msa1026830 | Msa1192990 | 0.801507 | 8.716452e-49 | -8.615850e-47 |
| Msa1030970 | Msa1192990 | 0.820667 | 6.076994e-53 | -8.615850e-47 |
| Msa1035300 | Msa1192990 | 0.802114 | 6.540147e-49 | -8.615850e-47 |
| Msa1045200 | Msa1192990 | 0.845775 | 3.291467e-59 | -8.615850e-47 |
| Msa1058580 | Msa1192990 | 0.818686 | 1.722331e-52 | -8.615850e-47 |
| Msa1059570 | Msa1192990 | 0.801430 | 9.037960e-49 | -8.615850e-47 |
| Msa1068200 | Msa1192990 | -0.825948 | 3.548607e-54 | -8.615850e-47 |
| Msa1075650 | Msa1192990 | 0.801552 | 8.532250e-49 | -8.615850e-47 |
| Msa1081330 | Msa1192990 | 0.809286 | 2.039980e-50 | -8.615850e-47 |
| Msa1082500 | Msa1192990 | 0.843173 | 1.649333e-58 | -8.615850e-47 |
| Msa1084260 | Msa1192990 | 0.833488 | 5.180783e-56 | -8.615850e-47 |
| Msa1098400 | Msa1192990 | 0.810821 | 9.524878e-51 | -8.615850e-47 |
| Msa0258760 | Msa1192990 | 0.805339 | 1.400432e-49 | -8.615850e-47 |
| Msa0260810 | Msa1192990 | 0.815523 | 8.849679e-52 | -8.615850e-47 |
| Msa0262510 | Msa1192990 | 0.804950 | 1.688622e-49 | -8.615850e-47 |
| Msa0264780 | Msa1192990 | 0.806546 | 7.803907e-50 | -8.615850e-47 |
| Msa0276920 | Msa1192990 | 0.802558 | 5.300738e-49 | -8.615850e-47 |
| Msa0313560 | Msa1192990 | 0.804458 | 2.139765e-49 | -8.615850e-47 |
| Msa0316800 | Msa1192990 | 0.804117 | 2.519934e-49 | -8.615850e-47 |
| Msa0321080 | Msa1192990 | 0.806220 | 9.145558e-50 | -8.615850e-47 |
| Msa0323080 | Msa1192990 | 0.823857 | 1.105266e-53 | -8.615850e-47 |
| Msa0323180 | Msa1192990 | 0.808975 | 2.377587e-50 | -8.615850e-47 |
| Msa0335040 | Msa1192990 | 0.807484 | 4.941362e-50 | -8.615850e-47 |
| Msa0356890 | Msa1192990 | -0.811376 | 7.222081e-51 | -8.615850e-47 |
| Msa1152990 | Msa1192990 | 0.804751 | 1.858741e-49 | -8.615850e-47 |
| Msa1158310 | Msa1192990 | 0.849351 | 3.419997e-60 | -8.615850e-47 |
| Msa1162550 | Msa1192990 | -0.806868 | 6.675449e-50 | -8.615850e-47 |
| Msa1165520 | Msa1192990 | 0.804032 | 2.624409e-49 | -8.615850e-47 |
| Msa1179770 | Msa1192990 | 0.822737 | 2.018054e-53 | -8.615850e-47 |
| Msa1185980 | Msa1192990 | 0.808819 | 2.567722e-50 | -8.615850e-47 |
| Msa1188710 | Msa1192990 | 0.865072 | 7.696457e-65 | -8.615850e-47 |
| Msa1192000 | Msa1192990 | 0.916633 | 1.408428e-85 | -8.615850e-47 |
| Msa1192990 | Msa1205130 | 0.814008 | 1.917156e-51 | -8.615850e-47 |
| Msa1192990 | Msa1205370 | 0.806857 | 6.709496e-50 | -8.615850e-47 |
| Msa1192990 | Msa1229600 | 0.825969 | 3.507290e-54 | -8.615850e-47 |
| Msa1192990 | Msa1238470 | 0.820579 | 6.365730e-53 | -8.615850e-47 |
| Msa1192990 | Msa1239720 | 0.825158 | 5.459674e-54 | -8.615850e-47 |
| Msa1192990 | Msa1247030 | 0.833106 | 6.453143e-56 | -8.615850e-47 |
| Msa1192990 | Msa1267960 | 0.819783 | 9.688929e-53 | -8.615850e-47 |
| Msa1192990 | Msa1278840 | 0.810206 | 1.293208e-50 | -8.615850e-47 |
| Msa1192990 | Msa1284680 | 0.820547 | 6.473625e-53 | -8.615850e-47 |
| Msa1192990 | Msa1287230 | 0.809720 | 1.645586e-50 | -8.615850e-47 |
| Msa1192990 | Msa1291660 | 0.804876 | 1.749836e-49 | -8.615850e-47 |
| Msa1192990 | Msa1299070 | 0.813320 | 2.716748e-51 | -8.615850e-47 |
| Msa1192990 | Msa1306850 | 0.816310 | 5.907331e-52 | -8.615850e-47 |
| Msa1192990 | Msa1307070 | 0.800639 | 1.311317e-48 | -8.615850e-47 |
| Msa1192990 | Msa1310210 | 0.816229 | 6.158168e-52 | -8.615850e-47 |
| Msa1192990 | Msa1316200 | 0.814260 | 1.686844e-51 | -8.615850e-47 |
| Msa1192990 | Msa1318990 | 0.801000 | 1.106895e-48 | -8.615850e-47 |
| Msa1192990 | Msa1322890 | 0.802980 | 4.336669e-49 | -8.615850e-47 |
| Msa1192990 | Msa1340650 | 0.802244 | 6.150366e-49 | -8.615850e-47 |
| Msa1192990 | Msa1353470 | 0.815534 | 8.801879e-52 | -8.615850e-47 |
| Msa1192990 | Msa1360060 | 0.802282 | 6.041202e-49 | -8.615850e-47 |
| Msa1192990 | Msa1372760 | 0.832102 | 1.144750e-55 | -8.615850e-47 |
| Msa1192990 | Msa1379850 | 0.834837 | 2.379085e-56 | -8.615850e-47 |
| Msa1192990 | Msa1393410 | 0.838106 | 3.502002e-57 | -8.615850e-47 |
| Msa1192990 | Msa1397610 | 0.802694 | 4.967175e-49 | -8.615850e-47 |
| Msa1192990 | Msa1404540 | 0.810296 | 1.236653e-50 | -8.615850e-47 |
| Msa1192990 | Msa1416630 | 0.803724 | 3.040424e-49 | -8.615850e-47 |
| Msa1192990 | Msa1424680 | 0.827625 | 1.410851e-54 | -8.615850e-47 |
| Msa1192990 | Msa1431060 | 0.805114 | 1.560818e-49 | -8.615850e-47 |
| Msa1192990 | Msa1435270 | 0.806582 | 7.671320e-50 | -8.615850e-47 |
| Msa1192990 | Msa1435420 | 0.838162 | 3.387045e-57 | -8.615850e-47 |
| Msa1192990 | Msa1436480 | 0.811728 | 6.053672e-51 | -8.615850e-47 |
| Msa1192990 | Msa1462930 | 0.815365 | 9.594440e-52 | -8.615850e-47 |
| Msa0484780 | Msa1192990 | 0.843500 | 1.348787e-58 | -8.615850e-47 |
| Msa0512900 | Msa1192990 | 0.806133 | 9.539387e-50 | -8.615850e-47 |
| Msa0516370 | Msa1192990 | 0.847777 | 9.330358e-60 | -8.615850e-47 |
| Msa0520700 | Msa1192990 | 0.803572 | 3.269636e-49 | -8.615850e-47 |
| Msa0530980 | Msa1192990 | 0.822404 | 2.412768e-53 | -8.615850e-47 |
| Msa0532350 | Msa1192990 | 0.808773 | 2.626404e-50 | -8.615850e-47 |
| Msa0535210 | Msa1192990 | 0.810367 | 1.194328e-50 | -8.615850e-47 |
| Msa0542480 | Msa1192990 | 0.825309 | 5.030119e-54 | -8.615850e-47 |
| Msa0545210 | Msa1192990 | 0.843078 | 1.747625e-58 | -8.615850e-47 |
| Msa0559190 | Msa1192990 | 0.805228 | 1.477156e-49 | -8.615850e-47 |
| Msa0559500 | Msa1192990 | 0.806674 | 7.335117e-50 | -8.615850e-47 |
| Msa0561910 | Msa1192990 | 0.800422 | 1.452073e-48 | -8.615850e-47 |
| Msa0564390 | Msa1192990 | 0.805784 | 1.129115e-49 | -8.615850e-47 |
| Msa0572480 | Msa1192990 | 0.828443 | 8.966591e-55 | -8.615850e-47 |
| Msa0581050 | Msa1192990 | 0.810362 | 1.197180e-50 | -8.615850e-47 |
| Msa0843780 | Msa1192990 | -0.827986 | 1.155232e-54 | -8.615850e-47 |
| Msa0861130 | Msa1192990 | 0.819310 | 1.241775e-52 | -8.615850e-47 |
| Msa0862320 | Msa1192990 | 0.803904 | 2.789594e-49 | -8.615850e-47 |
| Msa0870530 | Msa1192990 | 0.819281 | 1.260965e-52 | -8.615850e-47 |
| Msa0883580 | Msa1192990 | 0.808336 | 3.256787e-50 | -8.615850e-47 |
| Msa0907070 | Msa1192990 | 0.833000 | 6.857520e-56 | -8.615850e-47 |
| Msa0909120 | Msa1192990 | 0.802910 | 4.483277e-49 | -8.615850e-47 |
| Msa0924310 | Msa1192990 | 0.801901 | 7.235533e-49 | -8.615850e-47 |
| Msa0927280 | Msa1192990 | 0.813542 | 2.427951e-51 | -8.615850e-47 |
| Msa0927290 | Msa1192990 | 0.832503 | 9.108153e-56 | -8.615850e-47 |
| Msa0936210 | Msa1192990 | 0.835386 | 1.729162e-56 | -8.615850e-47 |
| Msa0951450 | Msa1192990 | 0.809204 | 2.123799e-50 | -8.615850e-47 |
| Msa0953550 | Msa1192990 | 0.800929 | 1.144149e-48 | -8.615850e-47 |
| Msa0954130 | Msa1192990 | 0.820598 | 6.301527e-53 | -8.615850e-47 |
| Msa0954530 | Msa1192990 | 0.800431 | 1.446264e-48 | -8.615850e-47 |
| Msa0954550 | Msa1192990 | 0.820014 | 8.578103e-53 | -8.615850e-47 |
| Msa0960530 | Msa1192990 | 0.811041 | 8.534695e-51 | -8.615850e-47 |
| Msa0967580 | Msa1192990 | 0.803863 | 2.845605e-49 | -8.615850e-47 |
| Msa0969450 | Msa1192990 | 0.805557 | 1.260185e-49 | -8.615850e-47 |
| Msa0969520 | Msa1192990 | 0.815259 | 1.013283e-51 | -8.615850e-47 |
| Msa0975220 | Msa1192990 | 0.816084 | 6.635561e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192990 | MtrunA17_Chr4g0019701 | 67.312 | 465 | 110 | 9 | 5 | 468 | 6 | 429 | 0.0 | 573 |
| Msa1192990 | MtrunA17_Chr4g0034491 | 60.321 | 436 | 112 | 9 | 1 | 389 | 3 | 424 | 2.09e-165 | 485 |
| Msa1192990 | MtrunA17_Chr4g0067151 | 31.301 | 246 | 137 | 14 | 32 | 260 | 93 | 323 | 1.08e-18 | 87.0 |
| Msa1192990 | MtrunA17_Chr2g0281451 | 27.477 | 222 | 140 | 11 | 57 | 268 | 54 | 264 | 7.87e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1192990 | AT3G18860.1 | 47.166 | 441 | 168 | 11 | 1 | 391 | 5 | 430 | 5.79e-123 | 376 |
| Msa1192990 | AT3G18860.2 | 47.166 | 441 | 168 | 11 | 1 | 391 | 5 | 430 | 5.92e-123 | 376 |
| Msa1192990 | AT3G49660.1 | 30.290 | 241 | 144 | 12 | 32 | 260 | 86 | 314 | 5.17e-20 | 90.9 |
| Msa1192990 | AT1G79990.1 | 25.564 | 266 | 166 | 11 | 50 | 296 | 4 | 256 | 2.43e-11 | 66.6 |
| Msa1192990 | AT1G79990.2 | 25.564 | 266 | 166 | 11 | 50 | 296 | 4 | 256 | 2.51e-11 | 66.6 |
Find 122 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTGGGATACAAAATTTA+TGG | 0.163017 | 8_1:+39087279 | Msa1192990:CDS |
| ACTACAGTTCTCTCAGATTA+TGG | 0.178467 | 8_1:+39086595 | Msa1192990:intron |
| AGTTCGTCCGTCGAGGAATA+TGG | 0.192117 | 8_1:+39091221 | Msa1192990:intron |
| AGTTCGTCCGTCGAGGAATA+TGG | 0.192117 | 8_1:+39092381 | Msa1192990:intron |
| AGTCCGTCCGTCGAGGAATA+TGG | 0.196755 | 8_1:+39090055 | Msa1192990:intron |
| AGAGTCCCTTGAACCTAAAA+TGG | 0.203614 | 8_1:-39086020 | None:intergenic |
| TTGGCTGCGATGTCTGATTT+TGG | 0.214527 | 8_1:+39086449 | Msa1192990:CDS |
| TTGAAAAGCGGTGGTGTTTC+TGG | 0.222387 | 8_1:+39085074 | Msa1192990:CDS |
| ATTTGAAGAGGTGGAGTAAT+TGG | 0.238721 | 8_1:+39085761 | Msa1192990:CDS |
| TTCACTACGCACTCTACTTT+TGG | 0.262170 | 8_1:-39091697 | None:intergenic |
| TGAATAATGCTGTGGTTGTT+TGG | 0.299775 | 8_1:+39085102 | Msa1192990:CDS |
| GGCGGAGTGCACAGCGTAAT+TGG | 0.307415 | 8_1:-39084869 | None:intergenic |
| CTTGTTTCATCTTCTATTGA+TGG | 0.317174 | 8_1:+39085203 | Msa1192990:CDS |
| GATGGTGTTCAGCATGATTA+TGG | 0.327272 | 8_1:+39087617 | Msa1192990:CDS |
| TGGGAGATATGACAGATCTA+TGG | 0.334089 | 8_1:+39090075 | Msa1192990:CDS |
| TGGGAGATATGACAGATCTA+TGG | 0.334089 | 8_1:+39091241 | Msa1192990:CDS |
| AGCTTTATAACTGCTTGAAT+TGG | 0.341084 | 8_1:-39085826 | None:intergenic |
| CCGATGGAGTTGTACGCATT+TGG | 0.342372 | 8_1:+39087329 | Msa1192990:CDS |
| GTGATTGATACGAGTGGATT+TGG | 0.349177 | 8_1:+39087727 | Msa1192990:intron |
| CCCACAGGAGAGCTTGTTAC+AGG | 0.356136 | 8_1:+39085850 | Msa1192990:CDS |
| CGATCAGTGTATCTACAATA+TGG | 0.357431 | 8_1:-39092473 | None:intergenic |
| CTACAGTTCTCTCAGATTAT+GGG | 0.367037 | 8_1:+39086596 | Msa1192990:intron |
| ATACAAAATTTATGGAAAAC+GGG | 0.370087 | 8_1:+39087287 | Msa1192990:CDS |
| GTTACTGGTATTGTGGTTGA+TGG | 0.375152 | 8_1:+39085173 | Msa1192990:CDS |
| GATCATGAATCGGAGGTTAC+TGG | 0.380364 | 8_1:+39085158 | Msa1192990:CDS |
| CAGTGGTAGCGAAGATCGTT+TGG | 0.399445 | 8_1:+39086704 | Msa1192990:CDS |
| TTTGTACCTGATTTGTTGAA+TGG | 0.411582 | 8_1:-39087769 | None:intergenic |
| GAATAATGCTGTGGTTGTTT+GGG | 0.416958 | 8_1:+39085103 | Msa1192990:CDS |
| GATACAAAATTTATGGAAAA+CGG | 0.420447 | 8_1:+39087286 | Msa1192990:CDS |
| GTCCGTCCGTCGAGGAATAT+GGG | 0.422376 | 8_1:+39090056 | Msa1192990:intron |
| GGGACTCTAGTTTAAAGATC+TGG | 0.422473 | 8_1:+39086035 | Msa1192990:CDS |
| AAGATTAACAAAGTTGCTGT+TGG | 0.428899 | 8_1:+39087566 | Msa1192990:intron |
| GGGAGATACGACAGATCTAT+TGG | 0.431545 | 8_1:+39092402 | Msa1192990:CDS |
| TTACTGGTATTGTGGTTGAT+GGG | 0.435643 | 8_1:+39085174 | Msa1192990:CDS |
| GTTCGAATTGCACGGAGACA+TGG | 0.436264 | 8_1:+39085788 | Msa1192990:CDS |
| GTTCGTCCGTCGAGGAATAT+GGG | 0.442204 | 8_1:+39091222 | Msa1192990:intron |
| GTTCGTCCGTCGAGGAATAT+GGG | 0.442204 | 8_1:+39092382 | Msa1192990:intron |
| CTGAACAAACAGTTGCAGTA+TGG | 0.447329 | 8_1:-39086653 | None:intergenic |
| TCAGTTGATTCACATGCATC+AGG | 0.449667 | 8_1:+39086672 | Msa1192990:CDS |
| ACCCATCATGGGATGCAGAT+AGG | 0.452110 | 8_1:-39086475 | None:intergenic |
| TTGTTTCATCTTCTATTGAT+GGG | 0.457455 | 8_1:+39085204 | Msa1192990:CDS |
| CTCAGATTATGGGCATTCAA+TGG | 0.463371 | 8_1:+39086606 | Msa1192990:CDS |
| AGTGGATTTGGTAGGCAATA+CGG | 0.465499 | 8_1:+39087739 | Msa1192990:CDS |
| AAGTTGCCATTCAACAAATC+AGG | 0.472764 | 8_1:+39087763 | Msa1192990:CDS |
| TCCTATCTGCATCCCATGAT+GGG | 0.476764 | 8_1:+39086474 | Msa1192990:CDS |
| AACAATAATAATTTAGTGAA+AGG | 0.480714 | 8_1:-39092706 | None:intergenic |
| TACTGGTATTGTGGTTGATG+GGG | 0.482696 | 8_1:+39085175 | Msa1192990:CDS |
| TTCGGTGGAATCCATGATAT+AGG | 0.482787 | 8_1:-39085044 | None:intergenic |
| TACAGATACTGTTTGTGGCT+TGG | 0.485506 | 8_1:+39086430 | Msa1192990:intron |
| AGAAATGAACCCACCCATCA+TGG | 0.491698 | 8_1:-39086487 | None:intergenic |
| TCCGCCGTTGTTGCCGCAGA+TGG | 0.491839 | 8_1:-39084919 | None:intergenic |
| CAACGCTTGACAAATCGATT+AGG | 0.494015 | 8_1:+39084952 | Msa1192990:CDS |
| GTGGATTTGGTAGGCAATAC+GGG | 0.495201 | 8_1:+39087740 | Msa1192990:CDS |
| CGAGGGAAATAGATCTCCTC+TGG | 0.495850 | 8_1:+39092494 | Msa1192990:three_prime_UTR |
| GAGTCCCTTGAACCTAAAAT+GGG | 0.507826 | 8_1:-39086019 | None:intergenic |
| TAACAAAGTTGCTGTTGGAT+CGG | 0.524007 | 8_1:+39087571 | Msa1192990:CDS |
| GTTGTTTGGGACGTGGATAG+TGG | 0.528762 | 8_1:+39085116 | Msa1192990:CDS |
| CACGATGATGATGAAGTTCG+CGG | 0.532720 | 8_1:+39084891 | Msa1192990:CDS |
| AGTAGAACTTACAACGCATT+GGG | 0.533269 | 8_1:-39091726 | None:intergenic |
| GGAGACATGGGCGGCTCACG+AGG | 0.534589 | 8_1:+39085801 | Msa1192990:CDS |
| GCTTCGTCGGACCTATATCA+TGG | 0.536402 | 8_1:+39085033 | Msa1192990:CDS |
| TCAAATCGCCCTTCCTTCGA+TGG | 0.536762 | 8_1:+39087599 | Msa1192990:CDS |
| TGTGCAGTAATTTGAAGAGG+TGG | 0.537765 | 8_1:+39085752 | Msa1192990:intron |
| GGGAGATATGACAGATCTAT+GGG | 0.538121 | 8_1:+39090076 | Msa1192990:CDS |
| GGGAGATATGACAGATCTAT+GGG | 0.538121 | 8_1:+39091242 | Msa1192990:CDS |
| ATCCTATCTGCATCCCATGA+TGG | 0.540343 | 8_1:+39086473 | Msa1192990:CDS |
| TGCTGTGGTTGTTTGGGACG+TGG | 0.540919 | 8_1:+39085109 | Msa1192990:CDS |
| TTGGAATTGTTCGAATTGCA+CGG | 0.545602 | 8_1:+39085780 | Msa1192990:CDS |
| ACCTGTAACAAGCTCTCCTG+TGG | 0.546432 | 8_1:-39085851 | None:intergenic |
| GAATGTACAGATACTGTTTG+TGG | 0.547131 | 8_1:+39086425 | Msa1192990:intron |
| GGAGGTCACACAAGCTTCGT+CGG | 0.549368 | 8_1:+39085020 | Msa1192990:CDS |
| CATGAGATAATGAACATGTC+TGG | 0.551794 | 8_1:+39086630 | Msa1192990:CDS |
| TGCTGAACACCATCGAAGGA+AGG | 0.554944 | 8_1:-39087608 | None:intergenic |
| TTGATACGAGTGGATTTGGT+AGG | 0.557534 | 8_1:+39087731 | Msa1192990:CDS |
| GTTCAGAGCATAGAGCATCC+TGG | 0.560137 | 8_1:+39087253 | Msa1192990:CDS |
| GAGTAGAACTTACAACGCAT+TGG | 0.560735 | 8_1:-39091727 | None:intergenic |
| ATTACCATCTGCGGCAACAA+CGG | 0.565704 | 8_1:+39084915 | Msa1192990:CDS |
| TTCGAATTGCACGGAGACAT+GGG | 0.566298 | 8_1:+39085789 | Msa1192990:CDS |
| GGGAAATGTATCTCATCTAG+TGG | 0.568918 | 8_1:+39092837 | Msa1192990:three_prime_UTR |
| GAAGACACTAGATCATGAAT+CGG | 0.571511 | 8_1:+39085148 | Msa1192990:CDS |
| GAAATGAACCCACCCATCAT+GGG | 0.575781 | 8_1:-39086486 | None:intergenic |
| TTTGTATCCCAAACAAAACC+AGG | 0.581250 | 8_1:-39087271 | None:intergenic |
| GCTGAACACCATCGAAGGAA+GGG | 0.586274 | 8_1:-39087607 | None:intergenic |
| TTGACAAATCGATTAGGCAT+TGG | 0.586483 | 8_1:+39084958 | Msa1192990:CDS |
| AATCGATTTGTCAAGCGTTG+AGG | 0.588590 | 8_1:-39084949 | None:intergenic |
| TCTTGTGCAGTAATTTGAAG+AGG | 0.591310 | 8_1:+39085749 | Msa1192990:intron |
| CTCCCATATTCCTCGACGGA+CGG | 0.592180 | 8_1:-39090058 | None:intergenic |
| TTGTTTGATACTCTGATCGA+GGG | 0.599700 | 8_1:+39092817 | Msa1192990:three_prime_UTR |
| GGGAAATAGATCTCCTCTGG+TGG | 0.600853 | 8_1:+39092497 | Msa1192990:three_prime_UTR |
| GTTGTTTGATACTCTGATCG+AGG | 0.602171 | 8_1:+39092816 | Msa1192990:three_prime_UTR |
| TGGTTGTGTGAATAATGCTG+TGG | 0.608311 | 8_1:+39085094 | Msa1192990:CDS |
| ACCATCTGCGGCAACAACGG+CGG | 0.609884 | 8_1:+39084918 | Msa1192990:CDS |
| TGTATAAATCAAGTTCTCGC+TGG | 0.611367 | 8_1:-39087378 | None:intergenic |
| ATCATGCTGAACACCATCGA+AGG | 0.614724 | 8_1:-39087612 | None:intergenic |
| AATAAACAGTTCGTCCGTCG+AGG | 0.616885 | 8_1:+39091214 | Msa1192990:intron |
| AATAAACAGTTCGTCCGTCG+AGG | 0.616885 | 8_1:+39092374 | Msa1192990:intron |
| AATAAACAGTCCGTCCGTCG+AGG | 0.617555 | 8_1:+39090048 | Msa1192990:intron |
| TATTGTAGATACACTGATCG+AGG | 0.621257 | 8_1:+39092476 | Msa1192990:three_prime_UTR |
| ATCGGAGGTTACTGGTATTG+TGG | 0.622916 | 8_1:+39085166 | Msa1192990:CDS |
| CCAAATGCGTACAACTCCAT+CGG | 0.622939 | 8_1:-39087329 | None:intergenic |
| CCTGTAACAAGCTCTCCTGT+GGG | 0.625764 | 8_1:-39085850 | None:intergenic |
| TATTCAGTGATTGATACGAG+TGG | 0.626968 | 8_1:+39087721 | Msa1192990:intron |
| AACCCTACTTTGAAAAGCGG+TGG | 0.631203 | 8_1:+39085065 | Msa1192990:CDS |
| CTCTAGTTTAAAGATCTGGA+AGG | 0.633553 | 8_1:+39086039 | Msa1192990:CDS |
| ATTGTGACAGCATGTTCCGA+TGG | 0.634535 | 8_1:+39087313 | Msa1192990:CDS |
| GACACTAGATCATGAATCGG+AGG | 0.635591 | 8_1:+39085151 | Msa1192990:CDS |
| GCAGTTATAAAGCTACCCAC+AGG | 0.640686 | 8_1:+39085835 | Msa1192990:CDS |
| TCTAGTTTAAAGATCTGGAA+GGG | 0.642275 | 8_1:+39086040 | Msa1192990:CDS |
| GCATCAGGACTTATTGTCAG+TGG | 0.647307 | 8_1:+39086687 | Msa1192990:CDS |
| ATTGTAGATACACTGATCGA+GGG | 0.647362 | 8_1:+39092477 | Msa1192990:three_prime_UTR |
| CCGAACCCTACTTTGAAAAG+CGG | 0.648212 | 8_1:+39085062 | Msa1192990:CDS |
| TACAAAATTTATGGAAAACG+GGG | 0.660584 | 8_1:+39087288 | Msa1192990:CDS |
| GAACTTACAACGCATTGGGT+CGG | 0.664761 | 8_1:-39091722 | None:intergenic |
| GAGACATGGGCGGCTCACGA+GGG | 0.670094 | 8_1:+39085802 | Msa1192990:CDS |
| GTATCTCCCATATTCCTCGA+CGG | 0.675906 | 8_1:-39092388 | None:intergenic |
| ATATCTCCCATATTCCTCGA+CGG | 0.684817 | 8_1:-39090062 | None:intergenic |
| ATATCTCCCATATTCCTCGA+CGG | 0.684817 | 8_1:-39091228 | None:intergenic |
| CGCGAACTTCATCATCATCG+TGG | 0.686703 | 8_1:-39084890 | None:intergenic |
| GTTCGCGGAATTACCATCTG+CGG | 0.708970 | 8_1:+39084906 | Msa1192990:CDS |
| ACATAAGAGATTTCCACCAG+AGG | 0.718207 | 8_1:-39092510 | None:intergenic |
| GAATTGCACGGAGACATGGG+CGG | 0.723851 | 8_1:+39085792 | Msa1192990:CDS |
| GAACTTCATCATCATCGTGG+CGG | 0.724783 | 8_1:-39084887 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAAAAATGAATTTATA+TGG | + | chr8_1:39087900-39087919 | Msa1192990:intron | 10.0% |
| !! | TATTTAAAAAATTATACATG+TGG | + | chr8_1:39089013-39089032 | Msa1192990:intron | 10.0% |
| !!! | TCAAAAAATAATAACAATTT+TGG | - | chr8_1:39089102-39089121 | None:intergenic | 10.0% |
| !! | AAAAATAATAGAAAATGAAA+CGG | - | chr8_1:39090331-39090350 | None:intergenic | 10.0% |
| !! | AAAATAATAGAAAATGAAAT+GGG | - | chr8_1:39091498-39091517 | None:intergenic | 10.0% |
| !! | AAAAATAATAGAAAATGAAA+TGG | - | chr8_1:39090331-39090350 | None:intergenic | 10.0% |
| !!! | CTATGATTTTTTTAAAAATA+TGG | + | chr8_1:39092794-39092813 | Msa1192990:three_prime_UTR | 10.0% |
| !!! | ACTTTGTTTTCTTTATATTT+TGG | + | chr8_1:39086225-39086244 | Msa1192990:intron | 15.0% |
| !! | TGTTATTAATTCATATTAAG+AGG | - | chr8_1:39086381-39086400 | None:intergenic | 15.0% |
| !! | TCAATATTTATTAAATCTAG+AGG | - | chr8_1:39086522-39086541 | None:intergenic | 15.0% |
| !!! | CTTATTTCTATTTTATATTG+AGG | + | chr8_1:39086956-39086975 | Msa1192990:intron | 15.0% |
| !!! | ATTTTAGAAGAAAAAGAAAA+TGG | + | chr8_1:39087004-39087023 | Msa1192990:intron | 15.0% |
| !!! | ACTGTAAAATCTTTTAAATT+TGG | - | chr8_1:39087514-39087533 | None:intergenic | 15.0% |
| !!! | TTCAATTGATTTAATAATGT+TGG | + | chr8_1:39087817-39087836 | Msa1192990:intron | 15.0% |
| !!! | TCAATTGATTTAATAATGTT+GGG | + | chr8_1:39087818-39087837 | Msa1192990:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr8_1:39088791-39088810 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr8_1:39088790-39088809 | Msa1192990:intron | 15.0% |
| !!! | AGTTTTCAAAAAAAAACTAT+TGG | + | chr8_1:39088824-39088843 | Msa1192990:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr8_1:39088848-39088867 | Msa1192990:intron | 15.0% |
| !!! | CATTTTGAAACAAATATTTT+TGG | + | chr8_1:39088951-39088970 | Msa1192990:intron | 15.0% |
| !!! | TTTCTTTTGTTATGTTTTTT+TGG | + | chr8_1:39089210-39089229 | Msa1192990:intron | 15.0% |
| !! | AAATAACAGAGAATTAAATA+GGG | - | chr8_1:39089626-39089645 | None:intergenic | 15.0% |
| !! | TAAATAACAGAGAATTAAAT+AGG | - | chr8_1:39089627-39089646 | None:intergenic | 15.0% |
| !! | CTAAATAAAAAATGCAAAAA+AGG | - | chr8_1:39089745-39089764 | None:intergenic | 15.0% |
| !! | AAAATAATAGAAAATGAAAC+GGG | - | chr8_1:39090330-39090349 | None:intergenic | 15.0% |
| !!! | TTTCTTTTGTTATGATTTTT+TGG | + | chr8_1:39090378-39090397 | Msa1192990:intron | 15.0% |
| !! | AAATAACAGAGAATTAAATA+GGG | - | chr8_1:39089626-39089645 | None:intergenic | 15.0% |
| !! | TAAATAACAGAGAATTAAAT+AGG | - | chr8_1:39089627-39089646 | None:intergenic | 15.0% |
| !! | CAAAATAAAAAATGCAAAAA+AGG | - | chr8_1:39090913-39090932 | None:intergenic | 15.0% |
| !! | AAATAATAGAAAATGAAATG+GGG | - | chr8_1:39091497-39091516 | None:intergenic | 15.0% |
| !!! | TTTCTTTTGTTATGATTTTT+TGG | + | chr8_1:39090378-39090397 | Msa1192990:intron | 15.0% |
| !! | AAATAACAGAGAATTAAATA+GGG | - | chr8_1:39089626-39089645 | None:intergenic | 15.0% |
| !! | TAAATAACAGAGAATTAAAT+AGG | - | chr8_1:39089627-39089646 | None:intergenic | 15.0% |
| !! | CAAAATAAAAAATGCAAAAA+AGG | - | chr8_1:39090913-39090932 | None:intergenic | 15.0% |
| !! | AACAATAATAATTTAGTGAA+AGG | - | chr8_1:39092709-39092728 | None:intergenic | 15.0% |
| !! | AACTATAGAGATTAATGAAT+TGG | + | chr8_1:39085504-39085523 | Msa1192990:intron | 20.0% |
| !!! | ATTTTGTCATCGATTTATAA+TGG | + | chr8_1:39086137-39086156 | Msa1192990:intron | 20.0% |
| !! | TTTGTCTTTATCAAGTTTAT+GGG | + | chr8_1:39086760-39086779 | Msa1192990:intron | 20.0% |
| !!! | AATAAACAAACTAGCTTATA+TGG | - | chr8_1:39086987-39087006 | None:intergenic | 20.0% |
| !! | GATACAAAATTTATGGAAAA+CGG | + | chr8_1:39087286-39087305 | Msa1192990:CDS | 20.0% |
| !! | ATACAAAATTTATGGAAAAC+GGG | + | chr8_1:39087287-39087306 | Msa1192990:CDS | 20.0% |
| !! | AAATGAATTTATATGGTCTT+TGG | + | chr8_1:39087907-39087926 | Msa1192990:intron | 20.0% |
| !! | AATGAATTTATATGGTCTTT+GGG | + | chr8_1:39087908-39087927 | Msa1192990:intron | 20.0% |
| !! | CTTTATATGTGAATAAAACA+TGG | + | chr8_1:39088028-39088047 | Msa1192990:intron | 20.0% |
| !!! | ATTGTAAAGAGAAATTTTTC+AGG | + | chr8_1:39088159-39088178 | Msa1192990:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr8_1:39088800-39088819 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr8_1:39088911-39088930 | Msa1192990:intron | 20.0% |
| !! | AAAATCTAAATCACAACAAA+TGG | - | chr8_1:39089466-39089485 | None:intergenic | 20.0% |
| !!! | TTTTTTGATTTCCAGTTTTA+TGG | + | chr8_1:39089515-39089534 | Msa1192990:intron | 20.0% |
| !!! | TTTTTGATTTCCAGTTTTAT+GGG | + | chr8_1:39089516-39089535 | Msa1192990:intron | 20.0% |
| !!! | ATTAAACACTCAAATCTTTT+TGG | + | chr8_1:39089864-39089883 | Msa1192990:intron | 20.0% |
| !! | AAGAACATATCATTACAATA+TGG | - | chr8_1:39090152-39090171 | None:intergenic | 20.0% |
| !! | TATTGTAATGATATGTTCTT+TGG | + | chr8_1:39090152-39090171 | Msa1192990:intron | 20.0% |
| !! | AATATCTAAATCATGACAAA+TGG | - | chr8_1:39090201-39090220 | None:intergenic | 20.0% |
| !! | AAATAATAGAAAATGAAACG+GGG | - | chr8_1:39090329-39090348 | None:intergenic | 20.0% |
| !! | AAAGAAAGACAAAAATGAAA+AGG | - | chr8_1:39089197-39089216 | None:intergenic | 20.0% |
| !! | ATTAAACACTCAAATCTTTA+TGG | + | chr8_1:39091034-39091053 | Msa1192990:intron | 20.0% |
| !! | AAGAACATAACATTACAATA+TGG | - | chr8_1:39091318-39091337 | None:intergenic | 20.0% |
| !! | TATTGTAATGTTATGTTCTT+TGG | + | chr8_1:39091318-39091337 | Msa1192990:intron | 20.0% |
| !! | AATATCTAAATCATGACAAA+TGG | - | chr8_1:39090201-39090220 | None:intergenic | 20.0% |
| !! | AAAGAAAGACAAAAATGAAA+AGG | - | chr8_1:39089197-39089216 | None:intergenic | 20.0% |
| !!! | TAAATAGCTTGGTTTTTTTT+TGG | - | chr8_1:39092569-39092588 | None:intergenic | 20.0% |
| ! | TTGTTTCATCTTCTATTGAT+GGG | + | chr8_1:39085204-39085223 | Msa1192990:CDS | 25.0% |
| ! | TGTAAAATCAGCGATTTATT+TGG | + | chr8_1:39085305-39085324 | Msa1192990:intron | 25.0% |
| ! | GTAAAATCAGCGATTTATTT+GGG | + | chr8_1:39085306-39085325 | Msa1192990:intron | 25.0% |
| !! | ATTTATTTGGGATAAAGTGT+TGG | + | chr8_1:39085318-39085337 | Msa1192990:intron | 25.0% |
| !! | TTTATTTGGGATAAAGTGTT+GGG | + | chr8_1:39085319-39085338 | Msa1192990:intron | 25.0% |
| !!! | TACAGGTATTGATACATTTT+CGG | + | chr8_1:39085867-39085886 | Msa1192990:intron | 25.0% |
| !! | AACTTTTCATTATCACTTGT+TGG | + | chr8_1:39085894-39085913 | Msa1192990:intron | 25.0% |
| !! | ACTTTTCATTATCACTTGTT+GGG | + | chr8_1:39085895-39085914 | Msa1192990:intron | 25.0% |
| !! | AACTTATATTCTCCCATTTT+AGG | + | chr8_1:39085989-39086008 | Msa1192990:intron | 25.0% |
| !! | GTTTGTTTACATACTTTTCA+TGG | + | chr8_1:39086067-39086086 | Msa1192990:CDS | 25.0% |
| ! | TAAAATGTGTGTCTAAAGAT+GGG | - | chr8_1:39086110-39086129 | None:intergenic | 25.0% |
| ! | TTAAAATGTGTGTCTAAAGA+TGG | - | chr8_1:39086111-39086130 | None:intergenic | 25.0% |
| !! | TAACTTATAGCTCTTTTGTT+TGG | + | chr8_1:39086161-39086180 | Msa1192990:intron | 25.0% |
| ! | GAAAGGTTAAGAATTAATCT+TGG | + | chr8_1:39086737-39086756 | Msa1192990:intron | 25.0% |
| ! | GTTTGTCTTTATCAAGTTTA+TGG | + | chr8_1:39086759-39086778 | Msa1192990:intron | 25.0% |
| ! | TTGTCTTTATCAAGTTTATG+GGG | + | chr8_1:39086761-39086780 | Msa1192990:intron | 25.0% |
| ! | GCGAAAAAAACTAAAACTAT+CGG | - | chr8_1:39087163-39087182 | None:intergenic | 25.0% |
| !! | TGTTTGGGATACAAAATTTA+TGG | + | chr8_1:39087279-39087298 | Msa1192990:CDS | 25.0% |
| ! | TACAAAATTTATGGAAAACG+GGG | + | chr8_1:39087288-39087307 | Msa1192990:CDS | 25.0% |
| ! | AATGCACAAAAAAAGGAAAT+TGG | + | chr8_1:39087426-39087445 | Msa1192990:CDS | 25.0% |
| ! | CAAAAAAAGGAAATTGGATA+AGG | + | chr8_1:39087432-39087451 | Msa1192990:CDS | 25.0% |
| ! | TATTAGAATGAGTGTATAGA+AGG | - | chr8_1:39087686-39087705 | None:intergenic | 25.0% |
| !! | TGTGAGTGTTTTCAATTTTT+AGG | + | chr8_1:39088260-39088279 | Msa1192990:intron | 25.0% |
| !! | GTGAGTGTTTTCAATTTTTA+GGG | + | chr8_1:39088261-39088280 | Msa1192990:intron | 25.0% |
| ! | TTAGCATATTAAGATTCACA+TGG | - | chr8_1:39088469-39088488 | None:intergenic | 25.0% |
| ! | AATGATTAAAAGAACGAGAA+TGG | + | chr8_1:39088757-39088776 | Msa1192990:intron | 25.0% |
| ! | TCACAAAAGTTGTTTAAAAG+TGG | - | chr8_1:39089143-39089162 | None:intergenic | 25.0% |
| ! | AGGTTATGGTTATCTTAATA+TGG | - | chr8_1:39089294-39089313 | None:intergenic | 25.0% |
| ! | AAAAGAATTGTATCTTCACA+TGG | - | chr8_1:39089499-39089518 | None:intergenic | 25.0% |
| ! | AAAAAAACATAACAGCAGAT+AGG | - | chr8_1:39089663-39089682 | None:intergenic | 25.0% |
| !!! | TATCTGCTGTTATGTTTTTT+TGG | + | chr8_1:39089662-39089681 | Msa1192990:intron | 25.0% |
| !!! | GAATTACTCTAACCTTTTTT+GGG | + | chr8_1:39089796-39089815 | Msa1192990:intron | 25.0% |
| ! | AAATGAATTGTATCTTCACA+TGG | - | chr8_1:39090234-39090253 | None:intergenic | 25.0% |
| !! | AGATTGCATTTTCATAAAAC+AGG | - | chr8_1:39090263-39090282 | None:intergenic | 25.0% |
| ! | AGGTTATGGTTATCTTAATA+TGG | - | chr8_1:39089294-39089313 | None:intergenic | 25.0% |
| ! | TTGATTAAATAAGAAACCAC+AGG | - | chr8_1:39090482-39090501 | None:intergenic | 25.0% |
| ! | AAAATCTAAATCACGACAAA+TGG | - | chr8_1:39090634-39090653 | None:intergenic | 25.0% |
| !!! | GAATTACTCTAACCTTTTTT+GGG | + | chr8_1:39089796-39089815 | Msa1192990:intron | 25.0% |
| ! | AAATGAATTGTATCTTCACA+TGG | - | chr8_1:39090234-39090253 | None:intergenic | 25.0% |
| !! | AGATTGCATTTTCATAAAAC+AGG | - | chr8_1:39090263-39090282 | None:intergenic | 25.0% |
| ! | AGGTTATGGTTATCTTAATA+TGG | - | chr8_1:39089294-39089313 | None:intergenic | 25.0% |
| ! | TTGATTAAATAAGAAACCAC+AGG | - | chr8_1:39090482-39090501 | None:intergenic | 25.0% |
| ! | AAAATCTAAATCACGACAAA+TGG | - | chr8_1:39090634-39090653 | None:intergenic | 25.0% |
| !!! | GAATTACTCTAACCTTTTTT+GGG | + | chr8_1:39089796-39089815 | Msa1192990:intron | 25.0% |
| ! | ATTAAACGCTCAAATCTTTA+TGG | + | chr8_1:39092202-39092221 | Msa1192990:intron | 25.0% |
| !!! | GGTTTTTTTTTGGTAACAAT+TGG | - | chr8_1:39092559-39092578 | None:intergenic | 25.0% |
| !! | AAGCTTTTCATTAAATAGCT+TGG | - | chr8_1:39092580-39092599 | None:intergenic | 25.0% |
| ! | TCTTATCTCTCTCTGAAAAA+TGG | + | chr8_1:39084830-39084849 | Msa1192990:exon | 30.0% |
| CTTGTTTCATCTTCTATTGA+TGG | + | chr8_1:39085203-39085222 | Msa1192990:CDS | 30.0% | |
| TACACTTATTATTCTCGTGT+TGG | - | chr8_1:39085355-39085374 | None:intergenic | 30.0% | |
| GTTGTGTAGATTCTTTAGTA+AGG | + | chr8_1:39085425-39085444 | Msa1192990:intron | 30.0% | |
| ATGATACACTTCTGAATGTT+AGG | + | chr8_1:39085664-39085683 | Msa1192990:intron | 30.0% | |
| AATTACTGCACAAGAAATTC+AGG | - | chr8_1:39085744-39085763 | None:intergenic | 30.0% | |
| ! | AGCTTTATAACTGCTTGAAT+TGG | - | chr8_1:39085829-39085848 | None:intergenic | 30.0% |
| ! | TCTAGTTTAAAGATCTGGAA+GGG | + | chr8_1:39086040-39086059 | Msa1192990:CDS | 30.0% |
| ATAGCAATAATGTTTCCTTG+TGG | + | chr8_1:39086281-39086300 | Msa1192990:intron | 30.0% | |
| ! | TTATATTCTTTTATGCTGCC+AGG | + | chr8_1:39086324-39086343 | Msa1192990:intron | 30.0% |
| ! | TATATTCTTTTATGCTGCCA+GGG | + | chr8_1:39086325-39086344 | Msa1192990:intron | 30.0% |
| AAGATCGTTTGGCAAAAATA+TGG | + | chr8_1:39086715-39086734 | Msa1192990:CDS | 30.0% | |
| TGTCTTTATCAAGTTTATGG+GGG | + | chr8_1:39086762-39086781 | Msa1192990:intron | 30.0% | |
| ! | AAGCAGATTCTTACAACTTT+TGG | - | chr8_1:39086836-39086855 | None:intergenic | 30.0% |
| GCTTGATATTGTATTCTCTT+TGG | + | chr8_1:39086852-39086871 | Msa1192990:intron | 30.0% | |
| AAATGTTAATCCTGAAGCTA+CGG | - | chr8_1:39086905-39086924 | None:intergenic | 30.0% | |
| TAGCTTCAGGATTAACATTT+CGG | + | chr8_1:39086905-39086924 | Msa1192990:intron | 30.0% | |
| GAAATAAGTTGCAATAACAG+CGG | - | chr8_1:39086944-39086963 | None:intergenic | 30.0% | |
| TATCGGCCATGTAAATAAAA+CGG | - | chr8_1:39087146-39087165 | None:intergenic | 30.0% | |
| ! | GTAAATCAGAATCATTTTGC+TGG | + | chr8_1:39087355-39087374 | Msa1192990:CDS | 30.0% |
| ACAAGTCAATGCACAAAAAA+AGG | + | chr8_1:39087419-39087438 | Msa1192990:CDS | 30.0% | |
| AACAGAATTACAGAGGTTAA+AGG | - | chr8_1:39087463-39087482 | None:intergenic | 30.0% | |
| AAGATTAACAAAGTTGCTGT+TGG | + | chr8_1:39087566-39087585 | Msa1192990:intron | 30.0% | |
| CAACTGTCAAGAAAAAAACA+AGG | - | chr8_1:39087650-39087669 | None:intergenic | 30.0% | |
| !! | TTTGTACCTGATTTGTTGAA+TGG | - | chr8_1:39087772-39087791 | None:intergenic | 30.0% |
| ! | GTACAAATTTTCTTTCCTCA+CGG | + | chr8_1:39087785-39087804 | Msa1192990:intron | 30.0% |
| ! | TACAAATTTTCTTTCCTCAC+GGG | + | chr8_1:39087786-39087805 | Msa1192990:intron | 30.0% |
| TCTAAGAGAGAGTGATTATT+TGG | + | chr8_1:39088005-39088024 | Msa1192990:intron | 30.0% | |
| TATGTGAATAAAACATGGTG+CGG | + | chr8_1:39088033-39088052 | Msa1192990:intron | 30.0% | |
| ! | AATGCAGAGACAAATTTGTT+AGG | + | chr8_1:39088129-39088148 | Msa1192990:intron | 30.0% |
| !!! | AGAGAAATTTTTCAGGAGAA+TGG | + | chr8_1:39088166-39088185 | Msa1192990:intron | 30.0% |
| !!! | GAGAAATTTTTCAGGAGAAT+GGG | + | chr8_1:39088167-39088186 | Msa1192990:intron | 30.0% |
| !!! | GTTTTCAATTTTTAGGGCTT+AGG | + | chr8_1:39088267-39088286 | Msa1192990:intron | 30.0% |
| AGTAACTGATCAGACTAAAT+GGG | - | chr8_1:39088336-39088355 | None:intergenic | 30.0% | |
| AAGTAACTGATCAGACTAAA+TGG | - | chr8_1:39088337-39088356 | None:intergenic | 30.0% | |
| ACAAACTACGAACAATGAAA+AGG | - | chr8_1:39088428-39088447 | None:intergenic | 30.0% | |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr8_1:39088708-39088727 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr8_1:39088709-39088728 | Msa1192990:intron | 30.0% |
| GGCAGTTCAGTTTATTAATT+AGG | + | chr8_1:39089231-39089250 | Msa1192990:intron | 30.0% | |
| ATTAAGATAACCATAACCTG+TGG | + | chr8_1:39089295-39089314 | Msa1192990:intron | 30.0% | |
| AAATAAGAAACCACAGGTTA+TGG | - | chr8_1:39089308-39089327 | None:intergenic | 30.0% | |
| TTGATCAAATAAGAAACCAC+AGG | - | chr8_1:39089314-39089333 | None:intergenic | 30.0% | |
| !!! | CGAATTACTCTAACCTTTTT+TGG | + | chr8_1:39089795-39089814 | Msa1192990:intron | 30.0% |
| !!! | ACACTCAAATCTTTTTGGTT+TGG | + | chr8_1:39089869-39089888 | Msa1192990:intron | 30.0% |
| !!! | CACTCAAATCTTTTTGGTTT+GGG | + | chr8_1:39089870-39089889 | Msa1192990:intron | 30.0% |
| ACAGCTGAAAATCTTTGAAT+TGG | + | chr8_1:39089898-39089917 | Msa1192990:intron | 30.0% | |
| ATTAAGATAACCATAACCTG+TGG | + | chr8_1:39089295-39089314 | Msa1192990:intron | 30.0% | |
| AAATAAGAAACCACAGGTTA+TGG | - | chr8_1:39089308-39089327 | None:intergenic | 30.0% | |
| AGAAGAATTGTATCTTCACA+TGG | - | chr8_1:39090667-39090686 | None:intergenic | 30.0% | |
| !!! | TTCTTTGCTTTCCAGTTTTT+TGG | + | chr8_1:39090683-39090702 | Msa1192990:intron | 30.0% |
| !!! | TCTTTGCTTTCCAGTTTTTT+GGG | + | chr8_1:39090684-39090703 | Msa1192990:intron | 30.0% |
| !!! | TGTCTGCTGTTATGTTTTTT+TGG | + | chr8_1:39090830-39090849 | Msa1192990:intron | 30.0% |
| !!! | GGAATTACTCTAACCTTTTT+TGG | + | chr8_1:39090964-39090983 | Msa1192990:intron | 30.0% |
| AAAGAAAGCTTTCCCAAAAA+AGG | - | chr8_1:39090980-39090999 | None:intergenic | 30.0% | |
| ACACTCAAATCTTTATGGTT+TGG | + | chr8_1:39091039-39091058 | Msa1192990:intron | 30.0% | |
| CACTCAAATCTTTATGGTTT+GGG | + | chr8_1:39091040-39091059 | Msa1192990:intron | 30.0% | |
| ACAGCTGAAAATCTTTGAAT+TGG | + | chr8_1:39089898-39089917 | Msa1192990:intron | 30.0% | |
| !!! | GTTATGATTTTTTGGCTGTT+CGG | + | chr8_1:39090386-39090405 | Msa1192990:intron | 30.0% |
| ATTAAGATAACCATAACCTG+TGG | + | chr8_1:39089295-39089314 | Msa1192990:intron | 30.0% | |
| AAATAAGAAACCACAGGTTA+TGG | - | chr8_1:39089308-39089327 | None:intergenic | 30.0% | |
| !!! | TTCTTTGCTTTCCAGTTTTT+TGG | + | chr8_1:39090683-39090702 | Msa1192990:intron | 30.0% |
| !!! | TCTTTGCTTTCCAGTTTTTT+GGG | + | chr8_1:39090684-39090703 | Msa1192990:intron | 30.0% |
| !!! | TGTCTGCTGTTATGTTTTTT+TGG | + | chr8_1:39090830-39090849 | Msa1192990:intron | 30.0% |
| !!! | GGAATTACTCTAACCTTTTT+TGG | + | chr8_1:39090964-39090983 | Msa1192990:intron | 30.0% |
| TAAAGAAAGCTTCCCAAAAA+AGG | - | chr8_1:39089811-39089830 | None:intergenic | 30.0% | |
| ACAGCTGAAAATCTTTGAAT+TGG | + | chr8_1:39089898-39089917 | Msa1192990:intron | 30.0% | |
| !! | TGCTTTTTGAATTCTGTGAT+AGG | + | chr8_1:39089921-39089940 | Msa1192990:intron | 30.0% |
| ! | TGGAAATCTCTTATGTTTTC+TGG | + | chr8_1:39092517-39092536 | Msa1192990:three_prime_UTR | 30.0% |
| ! | TCTCTCTGAAAAATGGACTT+TGG | + | chr8_1:39084837-39084856 | Msa1192990:exon | 35.0% |
| ! | CTCTCTGAAAAATGGACTTT+GGG | + | chr8_1:39084838-39084857 | Msa1192990:exon | 35.0% |
| TTGACAAATCGATTAGGCAT+TGG | + | chr8_1:39084958-39084977 | Msa1192990:CDS | 35.0% | |
| ! | TTCCGCTTGAACAAAGTTTT+TGG | + | chr8_1:39084999-39085018 | Msa1192990:CDS | 35.0% |
| CTCCAAAAACTTTGTTCAAG+CGG | - | chr8_1:39085004-39085023 | None:intergenic | 35.0% | |
| TGAATAATGCTGTGGTTGTT+TGG | + | chr8_1:39085102-39085121 | Msa1192990:CDS | 35.0% | |
| GAATAATGCTGTGGTTGTTT+GGG | + | chr8_1:39085103-39085122 | Msa1192990:CDS | 35.0% | |
| GAAGACACTAGATCATGAAT+CGG | + | chr8_1:39085148-39085167 | Msa1192990:CDS | 35.0% | |
| TTACTGGTATTGTGGTTGAT+GGG | + | chr8_1:39085174-39085193 | Msa1192990:CDS | 35.0% | |
| ! | TTCATCTTCTATTGATGGGT+AGG | + | chr8_1:39085208-39085227 | Msa1192990:intron | 35.0% |
| ! | TCATCTTCTATTGATGGGTA+GGG | + | chr8_1:39085209-39085228 | Msa1192990:intron | 35.0% |
| AGTCAAATTACCAGAGACAT+AGG | + | chr8_1:39085469-39085488 | Msa1192990:intron | 35.0% | |
| TTAAAGTCTTCCTATGTCTC+TGG | - | chr8_1:39085482-39085501 | None:intergenic | 35.0% | |
| TCTTGTGCAGTAATTTGAAG+AGG | + | chr8_1:39085749-39085768 | Msa1192990:intron | 35.0% | |
| ATTTGAAGAGGTGGAGTAAT+TGG | + | chr8_1:39085761-39085780 | Msa1192990:CDS | 35.0% | |
| TTGGAATTGTTCGAATTGCA+CGG | + | chr8_1:39085780-39085799 | Msa1192990:CDS | 35.0% | |
| ACACTCAGAATTATGTCTCT+TGG | + | chr8_1:39085920-39085939 | Msa1192990:intron | 35.0% | |
| CACTCAGAATTATGTCTCTT+GGG | + | chr8_1:39085921-39085940 | Msa1192990:intron | 35.0% | |
| GAAGTTCACACCATTTGAAA+TGG | + | chr8_1:39085943-39085962 | Msa1192990:intron | 35.0% | |
| ! | CACACCATTTGAAATGGTAT+TGG | + | chr8_1:39085949-39085968 | Msa1192990:intron | 35.0% |
| CAGTCCAATACCATTTCAAA+TGG | - | chr8_1:39085956-39085975 | None:intergenic | 35.0% | |
| ATGGGACTTGAACCTAAAAT+GGG | - | chr8_1:39086004-39086023 | None:intergenic | 35.0% | |
| AATGGGACTTGAACCTAAAA+TGG | - | chr8_1:39086005-39086024 | None:intergenic | 35.0% | |
| ! | TTAGGTTCAAGTCCCATTTT+AGG | + | chr8_1:39086007-39086026 | Msa1192990:intron | 35.0% |
| !!! | AAGTCCCATTTTAGGTTCAA+GGG | + | chr8_1:39086015-39086034 | Msa1192990:CDS | 35.0% |
| ! | CTCTAGTTTAAAGATCTGGA+AGG | + | chr8_1:39086039-39086058 | Msa1192990:CDS | 35.0% |
| CCTTTATGTCCTAAAATCGA+AGG | - | chr8_1:39086257-39086276 | None:intergenic | 35.0% | |
| !!! | CCTTCGATTTTAGGACATAA+AGG | + | chr8_1:39086254-39086273 | Msa1192990:intron | 35.0% |
| ! | TTTCCTTGTGGACATGATTT+TGG | + | chr8_1:39086293-39086312 | Msa1192990:intron | 35.0% |
| AGTATCTGTACATTCGTCAA+AGG | - | chr8_1:39086420-39086439 | None:intergenic | 35.0% | |
| GAATGTACAGATACTGTTTG+TGG | + | chr8_1:39086425-39086444 | Msa1192990:intron | 35.0% | |
| ACTACAGTTCTCTCAGATTA+TGG | + | chr8_1:39086595-39086614 | Msa1192990:intron | 35.0% | |
| CTACAGTTCTCTCAGATTAT+GGG | + | chr8_1:39086596-39086615 | Msa1192990:intron | 35.0% | |
| CATGAGATAATGAACATGTC+TGG | + | chr8_1:39086630-39086649 | Msa1192990:CDS | 35.0% | |
| CGTTTGGCAAAAATATGGAA+AGG | + | chr8_1:39086720-39086739 | Msa1192990:CDS | 35.0% | |
| GTCTTTATCAAGTTTATGGG+GGG | + | chr8_1:39086763-39086782 | Msa1192990:intron | 35.0% | |
| !!! | TATGGGGGGATTTTTTATTG+TGG | + | chr8_1:39086777-39086796 | Msa1192990:intron | 35.0% |
| !!! | ATGGGGGGATTTTTTATTGT+GGG | + | chr8_1:39086778-39086797 | Msa1192990:intron | 35.0% |
| TGTCATTCCATTCCTTATTC+CGG | + | chr8_1:39086810-39086829 | Msa1192990:intron | 35.0% | |
| ! | AGATTCTTACAACTTTTGGC+CGG | - | chr8_1:39086832-39086851 | None:intergenic | 35.0% |
| TGGCTAAAAAGTTAAAACCC+TGG | - | chr8_1:39087112-39087131 | None:intergenic | 35.0% | |
| !! | TTAACTTTTTAGCCACTCGA+AGG | + | chr8_1:39087117-39087136 | Msa1192990:intron | 35.0% |
| !!! | AGGCATCCGTTTTATTTACA+TGG | + | chr8_1:39087137-39087156 | Msa1192990:intron | 35.0% |
| TTTGTATCCCAAACAAAACC+AGG | - | chr8_1:39087274-39087293 | None:intergenic | 35.0% | |
| TGTATAAATCAAGTTCTCGC+TGG | - | chr8_1:39087381-39087400 | None:intergenic | 35.0% | |
| ! | TAACAAAGTTGCTGTTGGAT+CGG | + | chr8_1:39087571-39087590 | Msa1192990:CDS | 35.0% |
| TATTCAGTGATTGATACGAG+TGG | + | chr8_1:39087721-39087740 | Msa1192990:intron | 35.0% | |
| AAGTTGCCATTCAACAAATC+AGG | + | chr8_1:39087763-39087782 | Msa1192990:CDS | 35.0% | |
| ! | ACAAATTTTCTTTCCTCACG+GGG | + | chr8_1:39087787-39087806 | Msa1192990:intron | 35.0% |
| ! | AATGTTGGGATTGACTTTCT+TGG | + | chr8_1:39087832-39087851 | Msa1192990:intron | 35.0% |
| ! | ATGTTGGGATTGACTTTCTT+GGG | + | chr8_1:39087833-39087852 | Msa1192990:intron | 35.0% |
| !! | CTAAAGTACTGTGACTTAAG+AGG | - | chr8_1:39088109-39088128 | None:intergenic | 35.0% |
| TGAAAACACTCACAAGAGAA+GGG | - | chr8_1:39088254-39088273 | None:intergenic | 35.0% | |
| TTGAAAACACTCACAAGAGA+AGG | - | chr8_1:39088255-39088274 | None:intergenic | 35.0% | |
| ! | TCTTGCTCAATTTCTGCTTT+TGG | + | chr8_1:39088357-39088376 | Msa1192990:intron | 35.0% |
| ! | ATTCACATGGACAAACCTTT+TGG | - | chr8_1:39088456-39088475 | None:intergenic | 35.0% |
| !! | AAATGTCTCCAAAAGTACTG+TGG | + | chr8_1:39088508-39088527 | Msa1192990:intron | 35.0% |
| ! | CGTCTTGAAGTATCTTAATG+TGG | - | chr8_1:39088645-39088664 | None:intergenic | 35.0% |
| AGGGAGTAAAAATAGAATGG+TGG | - | chr8_1:39088685-39088704 | None:intergenic | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr8_1:39088873-39088892 | Msa1192990:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr8_1:39088877-39088896 | Msa1192990:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr8_1:39088977-39088996 | Msa1192990:intron | 35.0% |
| CACGTGTCAAAATTGCAAAA+GGG | + | chr8_1:39089061-39089080 | Msa1192990:intron | 35.0% | |
| ACGTGTCAAAATTGCAAAAG+GGG | + | chr8_1:39089062-39089081 | Msa1192990:intron | 35.0% | |
| ! | TACACTACGCACTTTACTTT+TGG | - | chr8_1:39089363-39089382 | None:intergenic | 35.0% |
| AGTAGAACTTACATTGCATC+GGG | - | chr8_1:39089392-39089411 | None:intergenic | 35.0% | |
| GAGTAGAACTTACATTGCAT+CGG | - | chr8_1:39089393-39089412 | None:intergenic | 35.0% | |
| AGTTACGTTTATCTTGCTCT+TGG | + | chr8_1:39089579-39089598 | Msa1192990:intron | 35.0% | |
| TCGAAGAGATTTGATTGATG+GGG | - | chr8_1:39089720-39089739 | None:intergenic | 35.0% | |
| GTCGAAGAGATTTGATTGAT+GGG | - | chr8_1:39089721-39089740 | None:intergenic | 35.0% | |
| TGTCGAAGAGATTTGATTGA+TGG | - | chr8_1:39089722-39089741 | None:intergenic | 35.0% | |
| GATGATGATATTCAGTGTGA+TGG | - | chr8_1:39089984-39090003 | None:intergenic | 35.0% | |
| TCATGATTGATTGTTAAGCC+TGG | + | chr8_1:39090282-39090301 | Msa1192990:intron | 35.0% | |
| AGTTACGTTTATCTTGCTCT+TGG | + | chr8_1:39089579-39089598 | Msa1192990:intron | 35.0% | |
| TCGAAGAGATTTGATTGAAG+GGG | - | chr8_1:39090888-39090907 | None:intergenic | 35.0% | |
| GTCGAAGAGATTTGATTGAA+GGG | - | chr8_1:39090889-39090908 | None:intergenic | 35.0% | |
| TGTCGAAGAGATTTGATTGA+AGG | - | chr8_1:39089722-39089741 | None:intergenic | 35.0% | |
| TTAATCTCGTCAGTGTTTCT+CGG | + | chr8_1:39089775-39089794 | Msa1192990:intron | 35.0% | |
| GATGATGATATTCAGTGTGA+TGG | - | chr8_1:39089984-39090003 | None:intergenic | 35.0% | |
| TCATGATTGATTGTTATGCC+TGG | + | chr8_1:39091450-39091469 | Msa1192990:intron | 35.0% | |
| AGTAGAACTTACAACGCATT+GGG | - | chr8_1:39091729-39091748 | None:intergenic | 35.0% | |
| AGAAGAATTGCATCTTCACA+TGG | - | chr8_1:39091836-39091855 | None:intergenic | 35.0% | |
| AGTTACGTTTATCTTGCTCT+TGG | + | chr8_1:39089579-39089598 | Msa1192990:intron | 35.0% | |
| TCGAAGAGATTTGATTGAAG+GGG | - | chr8_1:39090888-39090907 | None:intergenic | 35.0% | |
| GTCGAAGAGATTTGATTGAA+GGG | - | chr8_1:39090889-39090908 | None:intergenic | 35.0% | |
| TGTCGAAGAGATTTGATTGA+AGG | - | chr8_1:39089722-39089741 | None:intergenic | 35.0% | |
| TTAATCTCCTCAGTGTTTCT+CGG | + | chr8_1:39092112-39092131 | Msa1192990:intron | 35.0% | |
| ACGCTCAAATCTTTATGGTT+TGG | + | chr8_1:39092207-39092226 | Msa1192990:intron | 35.0% | |
| CGCTCAAATCTTTATGGTTT+GGG | + | chr8_1:39092208-39092227 | Msa1192990:intron | 35.0% | |
| GATGATGATATTCAGTGTGA+TGG | - | chr8_1:39089984-39090003 | None:intergenic | 35.0% | |
| CGATCAGTGTATCTACAATA+TGG | - | chr8_1:39092476-39092495 | None:intergenic | 35.0% | |
| TATTGTAGATACACTGATCG+AGG | + | chr8_1:39092476-39092495 | Msa1192990:three_prime_UTR | 35.0% | |
| ATTGTAGATACACTGATCGA+GGG | + | chr8_1:39092477-39092496 | Msa1192990:three_prime_UTR | 35.0% | |
| TTGTTTGATACTCTGATCGA+GGG | + | chr8_1:39092817-39092836 | Msa1192990:three_prime_UTR | 35.0% | |
| !! | AATCGATTTGTCAAGCGTTG+AGG | - | chr8_1:39084952-39084971 | None:intergenic | 40.0% |
| CAACGCTTGACAAATCGATT+AGG | + | chr8_1:39084952-39084971 | Msa1192990:CDS | 40.0% | |
| !! | CGCTTGAACAAAGTTTTTGG+AGG | + | chr8_1:39085002-39085021 | Msa1192990:CDS | 40.0% |
| TTCGGTGGAATCCATGATAT+AGG | - | chr8_1:39085047-39085066 | None:intergenic | 40.0% | |
| TGGTTGTGTGAATAATGCTG+TGG | + | chr8_1:39085094-39085113 | Msa1192990:CDS | 40.0% | |
| GTTACTGGTATTGTGGTTGA+TGG | + | chr8_1:39085173-39085192 | Msa1192990:CDS | 40.0% | |
| ! | TACTGGTATTGTGGTTGATG+GGG | + | chr8_1:39085175-39085194 | Msa1192990:CDS | 40.0% |
| !! | ATTTGGGATAAAGTGTTGGG+TGG | + | chr8_1:39085322-39085341 | Msa1192990:intron | 40.0% |
| ! | AAGCTTTATCCCACGAATCA+GGG | - | chr8_1:39085583-39085602 | None:intergenic | 40.0% |
| TGTGCAGTAATTTGAAGAGG+TGG | + | chr8_1:39085752-39085771 | Msa1192990:intron | 40.0% | |
| !!! | CAAGTCCCATTTTAGGTTCA+AGG | + | chr8_1:39086014-39086033 | Msa1192990:CDS | 40.0% |
| GAGTCCCTTGAACCTAAAAT+GGG | - | chr8_1:39086022-39086041 | None:intergenic | 40.0% | |
| AGAGTCCCTTGAACCTAAAA+TGG | - | chr8_1:39086023-39086042 | None:intergenic | 40.0% | |
| ! | GGGACTCTAGTTTAAAGATC+TGG | + | chr8_1:39086035-39086054 | Msa1192990:CDS | 40.0% |
| ! | CATACTTTTCATGGACATGC+AGG | + | chr8_1:39086076-39086095 | Msa1192990:CDS | 40.0% |
| CGTCACTCAGAGAAATATGA+GGG | - | chr8_1:39086194-39086213 | None:intergenic | 40.0% | |
| TCGTCACTCAGAGAAATATG+AGG | - | chr8_1:39086195-39086214 | None:intergenic | 40.0% | |
| TCATATTTCTCTGAGTGACG+AGG | + | chr8_1:39086194-39086213 | Msa1192990:intron | 40.0% | |
| TACAGATACTGTTTGTGGCT+TGG | + | chr8_1:39086430-39086449 | Msa1192990:intron | 40.0% | |
| ATATTTCCTGATGCAGAGCA+AGG | - | chr8_1:39086548-39086567 | None:intergenic | 40.0% | |
| GTAACAGAAACAAGTCAAGC+AGG | - | chr8_1:39086577-39086596 | None:intergenic | 40.0% | |
| CTCAGATTATGGGCATTCAA+TGG | + | chr8_1:39086606-39086625 | Msa1192990:CDS | 40.0% | |
| CTGAACAAACAGTTGCAGTA+TGG | - | chr8_1:39086656-39086675 | None:intergenic | 40.0% | |
| ! | TCAGTTGATTCACATGCATC+AGG | + | chr8_1:39086672-39086691 | Msa1192990:CDS | 40.0% |
| !!! | TGGGGGGATTTTTTATTGTG+GGG | + | chr8_1:39086779-39086798 | Msa1192990:intron | 40.0% |
| !!! | GGATTTTTTATTGTGGGGGT+GGG | + | chr8_1:39086784-39086803 | Msa1192990:intron | 40.0% |
| !!! | GATTTTTTATTGTGGGGGTG+GGG | + | chr8_1:39086785-39086804 | Msa1192990:intron | 40.0% |
| !!! | ATTTTTTATTGTGGGGGTGG+GGG | + | chr8_1:39086786-39086805 | Msa1192990:intron | 40.0% |
| ! | TACAACTTTTGGCCGGAATA+AGG | - | chr8_1:39086825-39086844 | None:intergenic | 40.0% |
| ! | AAGCTACGGATTGTGAAAGT+TGG | - | chr8_1:39086891-39086910 | None:intergenic | 40.0% |
| GTTGCAATAACAGCGGATAT+TGG | - | chr8_1:39086937-39086956 | None:intergenic | 40.0% | |
| GTCAATTCGATCGGTGATAA+TGG | - | chr8_1:39087074-39087093 | None:intergenic | 40.0% | |
| !!! | AGTTTTTTTCGCCACATCAC+CGG | + | chr8_1:39087171-39087190 | Msa1192990:intron | 40.0% |
| CAATTCCAAGCAACAAGTTC+CGG | - | chr8_1:39087193-39087212 | None:intergenic | 40.0% | |
| !!! | TAGAGCATCCTGGTTTTGTT+TGG | + | chr8_1:39087263-39087282 | Msa1192990:CDS | 40.0% |
| !!! | AGAGCATCCTGGTTTTGTTT+GGG | + | chr8_1:39087264-39087283 | Msa1192990:CDS | 40.0% |
| CTAACGGAACAGAATTACAG+AGG | - | chr8_1:39087470-39087489 | None:intergenic | 40.0% | |
| CAGAACTTGGGATTGACTAA+CGG | - | chr8_1:39087486-39087505 | None:intergenic | 40.0% | |
| AATTTGGCACTGCAGAACTT+GGG | - | chr8_1:39087498-39087517 | None:intergenic | 40.0% | |
| AAATTTGGCACTGCAGAACT+TGG | - | chr8_1:39087499-39087518 | None:intergenic | 40.0% | |
| GATGGTGTTCAGCATGATTA+TGG | + | chr8_1:39087617-39087636 | Msa1192990:CDS | 40.0% | |
| ! | GTGATTGATACGAGTGGATT+TGG | + | chr8_1:39087727-39087746 | Msa1192990:intron | 40.0% |
| ! | TTGATACGAGTGGATTTGGT+AGG | + | chr8_1:39087731-39087750 | Msa1192990:CDS | 40.0% |
| ! | AGTGGATTTGGTAGGCAATA+CGG | + | chr8_1:39087739-39087758 | Msa1192990:CDS | 40.0% |
| TACTGTGACTTAAGAGGTCA+AGG | - | chr8_1:39088103-39088122 | None:intergenic | 40.0% | |
| GGCTTAGGAATGATGTGTTA+GGG | + | chr8_1:39088282-39088301 | Msa1192990:intron | 40.0% | |
| ACTGATCAGACTAAATGGGT+TGG | - | chr8_1:39088332-39088351 | None:intergenic | 40.0% | |
| ! | CGTAGTTTGTATGCTCCAAA+AGG | + | chr8_1:39088438-39088457 | Msa1192990:intron | 40.0% |
| ! | CTATGGTACCACAGTACTTT+TGG | - | chr8_1:39088519-39088538 | None:intergenic | 40.0% |
| GTACTGTGGTACCATAGAAA+TGG | + | chr8_1:39088522-39088541 | Msa1192990:intron | 40.0% | |
| ! | GGCGTCTTTTTCCATTTCTA+TGG | - | chr8_1:39088536-39088555 | None:intergenic | 40.0% |
| ATGGAAAAAGACGCCAATAG+AGG | + | chr8_1:39088541-39088560 | Msa1192990:intron | 40.0% | |
| TGGAAAAAGACGCCAATAGA+GGG | + | chr8_1:39088542-39088561 | Msa1192990:intron | 40.0% | |
| ! | TTAGATCTAGAGCCCTCTAT+TGG | - | chr8_1:39088557-39088576 | None:intergenic | 40.0% |
| !! | AATAGAGGGCTCTAGATCTA+AGG | + | chr8_1:39088556-39088575 | Msa1192990:intron | 40.0% |
| AACAGTTAGGCATTCATTCG+TGG | - | chr8_1:39088602-39088621 | None:intergenic | 40.0% | |
| ACGAATGAATGCCTAACTGT+TGG | + | chr8_1:39088601-39088620 | Msa1192990:intron | 40.0% | |
| CGAATGAATGCCTAACTGTT+GGG | + | chr8_1:39088602-39088621 | Msa1192990:intron | 40.0% | |
| CGGAGGGAGTAAAAATAGAA+TGG | - | chr8_1:39088688-39088707 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8_1:39088981-39089000 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr8_1:39088876-39088895 | Msa1192990:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8_1:39088981-39089000 | Msa1192990:intron | 40.0% |
| GCATCCTAATCACTTAAGTG+AGG | + | chr8_1:39089035-39089054 | Msa1192990:intron | 40.0% | |
| !! | CCTTTTGCAATTTTGACACG+TGG | - | chr8_1:39089063-39089082 | None:intergenic | 40.0% |
| CCACGTGTCAAAATTGCAAA+AGG | + | chr8_1:39089060-39089079 | Msa1192990:intron | 40.0% | |
| AGCTTGCATTCCCATAAAAC+TGG | - | chr8_1:39089529-39089548 | None:intergenic | 40.0% | |
| !!! | AGGGTCTTTTTTGCAAGTCA+TGG | - | chr8_1:39089607-39089626 | None:intergenic | 40.0% |
| GATGATATTCAGTGTGATGG+AGG | - | chr8_1:39089981-39090000 | None:intergenic | 40.0% | |
| ATATCTCCCATATTCCTCGA+CGG | - | chr8_1:39090065-39090084 | None:intergenic | 40.0% | |
| TGGGAGATATGACAGATCTA+TGG | + | chr8_1:39090075-39090094 | Msa1192990:CDS | 40.0% | |
| GGGAGATATGACAGATCTAT+GGG | + | chr8_1:39090076-39090095 | Msa1192990:CDS | 40.0% | |
| GGCTGTTCAGTTTATGCATT+AGG | + | chr8_1:39090399-39090418 | Msa1192990:intron | 40.0% | |
| ! | TTCACTACGCACTCTACTTT+TGG | - | chr8_1:39090531-39090550 | None:intergenic | 40.0% |
| AGTAGAACTTACAACGCATC+GGG | - | chr8_1:39090560-39090579 | None:intergenic | 40.0% | |
| GAGTAGAACTTACAACGCAT+CGG | - | chr8_1:39090561-39090580 | None:intergenic | 40.0% | |
| AGCTTGCATTCCCAAAAAAC+TGG | - | chr8_1:39090697-39090716 | None:intergenic | 40.0% | |
| !!! | AGGGTCTTTTTTCCAAGTCA+TGG | - | chr8_1:39090775-39090794 | None:intergenic | 40.0% |
| GATGATATTCAGTGTGATGG+AGG | - | chr8_1:39089981-39090000 | None:intergenic | 40.0% | |
| ATATCTCCCATATTCCTCGA+CGG | - | chr8_1:39090065-39090084 | None:intergenic | 40.0% | |
| TGGGAGATATGACAGATCTA+TGG | + | chr8_1:39090075-39090094 | Msa1192990:CDS | 40.0% | |
| GGGAGATATGACAGATCTAT+GGG | + | chr8_1:39090076-39090095 | Msa1192990:CDS | 40.0% | |
| ! | TTCACTACGCACTCTACTTT+TGG | - | chr8_1:39090531-39090550 | None:intergenic | 40.0% |
| GAGTAGAACTTACAACGCAT+TGG | - | chr8_1:39090561-39090580 | None:intergenic | 40.0% | |
| AGCTTGCATTCCCAAAAAAC+TGG | - | chr8_1:39090697-39090716 | None:intergenic | 40.0% | |
| !!! | AGGGTCTTTTTTCCAAGTCA+TGG | - | chr8_1:39090775-39090794 | None:intergenic | 40.0% |
| AGTAATTCCGAGAAACACTG+AGG | - | chr8_1:39090953-39090972 | None:intergenic | 40.0% | |
| GATGATATTCAGTGTGATGG+AGG | - | chr8_1:39089981-39090000 | None:intergenic | 40.0% | |
| ACATAAGAGATTTCCACCAG+AGG | - | chr8_1:39092513-39092532 | None:intergenic | 40.0% | |
| GTTGTTTGATACTCTGATCG+AGG | + | chr8_1:39092816-39092835 | Msa1192990:three_prime_UTR | 40.0% | |
| GGGAAATGTATCTCATCTAG+TGG | + | chr8_1:39092837-39092856 | Msa1192990:three_prime_UTR | 40.0% | |
| GAACTTCATCATCATCGTGG+CGG | - | chr8_1:39084890-39084909 | None:intergenic | 45.0% | |
| ! | CACGATGATGATGAAGTTCG+CGG | + | chr8_1:39084891-39084910 | Msa1192990:CDS | 45.0% |
| ATTACCATCTGCGGCAACAA+CGG | + | chr8_1:39084915-39084934 | Msa1192990:CDS | 45.0% | |
| ! | CTTTTCAAAGTAGGGTTCGG+TGG | - | chr8_1:39085062-39085081 | None:intergenic | 45.0% |
| !! | CCGCTTTTCAAAGTAGGGTT+CGG | - | chr8_1:39085065-39085084 | None:intergenic | 45.0% |
| ! | CCGAACCCTACTTTGAAAAG+CGG | + | chr8_1:39085062-39085081 | Msa1192990:CDS | 45.0% |
| ! | AACCCTACTTTGAAAAGCGG+TGG | + | chr8_1:39085065-39085084 | Msa1192990:CDS | 45.0% |
| !! | CACCACCGCTTTTCAAAGTA+GGG | - | chr8_1:39085070-39085089 | None:intergenic | 45.0% |
| !! | ACACCACCGCTTTTCAAAGT+AGG | - | chr8_1:39085071-39085090 | None:intergenic | 45.0% |
| TTGAAAAGCGGTGGTGTTTC+TGG | + | chr8_1:39085074-39085093 | Msa1192990:CDS | 45.0% | |
| GACACTAGATCATGAATCGG+AGG | + | chr8_1:39085151-39085170 | Msa1192990:CDS | 45.0% | |
| GATCATGAATCGGAGGTTAC+TGG | + | chr8_1:39085158-39085177 | Msa1192990:CDS | 45.0% | |
| ATCGGAGGTTACTGGTATTG+TGG | + | chr8_1:39085166-39085185 | Msa1192990:CDS | 45.0% | |
| ! | CTGAGATGATGATGTTGTGC+TGG | + | chr8_1:39085376-39085395 | Msa1192990:intron | 45.0% |
| GATGATGTTGTGCTGGATCT+TGG | + | chr8_1:39085383-39085402 | Msa1192990:intron | 45.0% | |
| TGTTGTGCTGGATCTTGGTT+TGG | + | chr8_1:39085388-39085407 | Msa1192990:intron | 45.0% | |
| GTTGTGCTGGATCTTGGTTT+GGG | + | chr8_1:39085389-39085408 | Msa1192990:intron | 45.0% | |
| AAGGAGAGCAGATCAGATGA+AGG | + | chr8_1:39085444-39085463 | Msa1192990:intron | 45.0% | |
| GGTCGGCTACATGGATAAAA+CGG | - | chr8_1:39085562-39085581 | None:intergenic | 45.0% | |
| TTTATCCCACGAATCAGGGT+CGG | - | chr8_1:39085579-39085598 | None:intergenic | 45.0% | |
| ! | CAAGCTTTATCCCACGAATC+AGG | - | chr8_1:39085584-39085603 | None:intergenic | 45.0% |
| ! | CTGATTCGTGGGATAAAGCT+TGG | + | chr8_1:39085582-39085601 | Msa1192990:intron | 45.0% |
| TTCGAATTGCACGGAGACAT+GGG | + | chr8_1:39085789-39085808 | Msa1192990:CDS | 45.0% | |
| GCAGTTATAAAGCTACCCAC+AGG | + | chr8_1:39085835-39085854 | Msa1192990:CDS | 45.0% | |
| TTTCTCTGAGTGACGAGGAA+TGG | + | chr8_1:39086199-39086218 | Msa1192990:intron | 45.0% | |
| ! | TGGTCTGTGCCTTCGATTTT+AGG | + | chr8_1:39086245-39086264 | Msa1192990:intron | 45.0% |
| CTGCCAAAATCATGTCCACA+AGG | - | chr8_1:39086299-39086318 | None:intergenic | 45.0% | |
| CAGCAAAAATATGCAGTCCC+TGG | - | chr8_1:39086345-39086364 | None:intergenic | 45.0% | |
| ! | TTGGCTGCGATGTCTGATTT+TGG | + | chr8_1:39086449-39086468 | Msa1192990:CDS | 45.0% |
| ATCCTATCTGCATCCCATGA+TGG | + | chr8_1:39086473-39086492 | Msa1192990:CDS | 45.0% | |
| TCCTATCTGCATCCCATGAT+GGG | + | chr8_1:39086474-39086493 | Msa1192990:CDS | 45.0% | |
| GAAATGAACCCACCCATCAT+GGG | - | chr8_1:39086489-39086508 | None:intergenic | 45.0% | |
| AGAAATGAACCCACCCATCA+TGG | - | chr8_1:39086490-39086509 | None:intergenic | 45.0% | |
| GCATCAGGACTTATTGTCAG+TGG | + | chr8_1:39086687-39086706 | Msa1192990:CDS | 45.0% | |
| !!! | GGGGGGATTTTTTATTGTGG+GGG | + | chr8_1:39086780-39086799 | Msa1192990:intron | 45.0% |
| !!! | GGGATTTTTTATTGTGGGGG+TGG | + | chr8_1:39086783-39086802 | Msa1192990:intron | 45.0% |
| ! | CTTTTGGCCGGAATAAGGAA+TGG | - | chr8_1:39086820-39086839 | None:intergenic | 45.0% |
| GGATTGTGAAAGTTGGAGCT+GGG | - | chr8_1:39086884-39086903 | None:intergenic | 45.0% | |
| CTTTCACAATCCGTAGCTTC+AGG | + | chr8_1:39086892-39086911 | Msa1192990:intron | 45.0% | |
| !! | TCGGTGATAATGGAAGAGAC+TGG | - | chr8_1:39087064-39087083 | None:intergenic | 45.0% |
| CACATGCACGTCAATTCGAT+CGG | - | chr8_1:39087083-39087102 | None:intergenic | 45.0% | |
| ATAAAACGGATGCCTTCGAG+TGG | - | chr8_1:39087132-39087151 | None:intergenic | 45.0% | |
| ATTGTGACAGCATGTTCCGA+TGG | + | chr8_1:39087313-39087332 | Msa1192990:CDS | 45.0% | |
| CCAAATGCGTACAACTCCAT+CGG | - | chr8_1:39087332-39087351 | None:intergenic | 45.0% | |
| ATCATGCTGAACACCATCGA+AGG | - | chr8_1:39087615-39087634 | None:intergenic | 45.0% | |
| ! | GTGGATTTGGTAGGCAATAC+GGG | + | chr8_1:39087740-39087759 | Msa1192990:CDS | 45.0% |
| GACAGTAACATCAATTGCCG+TGG | - | chr8_1:39087859-39087878 | None:intergenic | 45.0% | |
| GGGCTTAGGAATGATGTGTT+AGG | + | chr8_1:39088281-39088300 | Msa1192990:intron | 45.0% | |
| !! | GGCATTCATTCGTGGTTTTG+AGG | - | chr8_1:39088594-39088613 | None:intergenic | 45.0% |
| TCAAATCCAGCCCAACAGTT+AGG | - | chr8_1:39088615-39088634 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8_1:39088980-39088999 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8_1:39088980-39088999 | Msa1192990:intron | 45.0% |
| GGCACCTCACTTAAGTGATT+AGG | - | chr8_1:39089042-39089061 | None:intergenic | 45.0% | |
| TGCAAAAGGGGCTAAGCATA+AGG | + | chr8_1:39089074-39089093 | Msa1192990:intron | 45.0% | |
| GCAAAAGGGGCTAAGCATAA+GGG | + | chr8_1:39089075-39089094 | Msa1192990:intron | 45.0% | |
| GAACTTACATTGCATCGGGT+CGG | - | chr8_1:39089388-39089407 | None:intergenic | 45.0% | |
| TGGGAATGCAAGCTCATGAT+TGG | + | chr8_1:39089535-39089554 | Msa1192990:intron | 45.0% | |
| TTAAGCCTGGTTACTAGACC+AGG | + | chr8_1:39090295-39090314 | Msa1192990:intron | 45.0% | |
| ATTTGCCTGGTCTAGTAACC+AGG | - | chr8_1:39090303-39090322 | None:intergenic | 45.0% | |
| TGGGAATGCAAGCTCATGAT+TGG | + | chr8_1:39089535-39089554 | Msa1192990:intron | 45.0% | |
| TTGCTCTTGGTTCCATGACT+TGG | + | chr8_1:39089592-39089611 | Msa1192990:intron | 45.0% | |
| AATAAACAGTTCGTCCGTCG+AGG | + | chr8_1:39091214-39091233 | Msa1192990:intron | 45.0% | |
| TTATGCCTGGTTACTAGACC+AGG | + | chr8_1:39091463-39091482 | Msa1192990:intron | 45.0% | |
| ATTTGCCTGGTCTAGTAACC+AGG | - | chr8_1:39090303-39090322 | None:intergenic | 45.0% | |
| TGAAATGGGGTCAATTTGCC+TGG | - | chr8_1:39091484-39091503 | None:intergenic | 45.0% | |
| GGCTGTTCGGTTTATGCATT+AGG | + | chr8_1:39091568-39091587 | Msa1192990:intron | 45.0% | |
| GAACTTACAACGCATTGGGT+CGG | - | chr8_1:39091725-39091744 | None:intergenic | 45.0% | |
| TGGGAATGCAAGCTCATGAT+TGG | + | chr8_1:39089535-39089554 | Msa1192990:intron | 45.0% | |
| TTGCTCTTGGTTCCATGACT+TGG | + | chr8_1:39089592-39089611 | Msa1192990:intron | 45.0% | |
| AATAAACAGTTCGTCCGTCG+AGG | + | chr8_1:39091214-39091233 | Msa1192990:intron | 45.0% | |
| GTATCTCCCATATTCCTCGA+CGG | - | chr8_1:39092391-39092410 | None:intergenic | 45.0% | |
| GGGAGATACGACAGATCTAT+TGG | + | chr8_1:39092402-39092421 | Msa1192990:CDS | 45.0% | |
| !!! | AGTTTTTTTTTTTTTTTTTT+TGG | + | chr8_1:39092613-39092632 | Msa1192990:three_prime_UTR | 5.0% |
| !!! | TATTTATTTATTTTTTACTT+TGG | + | chr8_1:39092650-39092669 | Msa1192990:three_prime_UTR | 5.0% |
| CGCGAACTTCATCATCATCG+TGG | - | chr8_1:39084893-39084912 | None:intergenic | 50.0% | |
| GTTCGCGGAATTACCATCTG+CGG | + | chr8_1:39084906-39084925 | Msa1192990:CDS | 50.0% | |
| GCTTCGTCGGACCTATATCA+TGG | + | chr8_1:39085033-39085052 | Msa1192990:CDS | 50.0% | |
| ! | GTTGTTTGGGACGTGGATAG+TGG | + | chr8_1:39085116-39085135 | Msa1192990:CDS | 50.0% |
| ! | TGGTTTGGGCAAGTAGCAAG+AGG | + | chr8_1:39085403-39085422 | Msa1192990:intron | 50.0% |
| GTTCGAATTGCACGGAGACA+TGG | + | chr8_1:39085788-39085807 | Msa1192990:CDS | 50.0% | |
| CCTGTAACAAGCTCTCCTGT+GGG | - | chr8_1:39085853-39085872 | None:intergenic | 50.0% | |
| ACCTGTAACAAGCTCTCCTG+TGG | - | chr8_1:39085854-39085873 | None:intergenic | 50.0% | |
| ACCCATCATGGGATGCAGAT+AGG | - | chr8_1:39086478-39086497 | None:intergenic | 50.0% | |
| ! | TATCTGCATCCCATGATGGG+TGG | + | chr8_1:39086477-39086496 | Msa1192990:intron | 50.0% |
| !! | ATCTGCATCCCATGATGGGT+GGG | + | chr8_1:39086478-39086497 | Msa1192990:intron | 50.0% |
| TGAATGCCTTGCTCTGCATC+AGG | + | chr8_1:39086539-39086558 | Msa1192990:intron | 50.0% | |
| ! | CAGTGGTAGCGAAGATCGTT+TGG | + | chr8_1:39086704-39086723 | Msa1192990:CDS | 50.0% |
| CGGATTGTGAAAGTTGGAGC+TGG | - | chr8_1:39086885-39086904 | None:intergenic | 50.0% | |
| ! | ACGTGCATGTGAAGCATCCA+GGG | + | chr8_1:39087092-39087111 | Msa1192990:intron | 50.0% |
| AGCAACAAGTTCCGGTGATG+TGG | - | chr8_1:39087185-39087204 | None:intergenic | 50.0% | |
| !! | CATCACCGGAACTTGTTGCT+TGG | + | chr8_1:39087185-39087204 | Msa1192990:intron | 50.0% |
| ! | GTTCAGAGCATAGAGCATCC+TGG | + | chr8_1:39087253-39087272 | Msa1192990:CDS | 50.0% |
| CCGATGGAGTTGTACGCATT+TGG | + | chr8_1:39087329-39087348 | Msa1192990:CDS | 50.0% | |
| TCAAATCGCCCTTCCTTCGA+TGG | + | chr8_1:39087599-39087618 | Msa1192990:CDS | 50.0% | |
| GCTGAACACCATCGAAGGAA+GGG | - | chr8_1:39087610-39087629 | None:intergenic | 50.0% | |
| TGCTGAACACCATCGAAGGA+AGG | - | chr8_1:39087611-39087630 | None:intergenic | 50.0% | |
| ATTGAAGTTGCAACCCCGTG+AGG | - | chr8_1:39087803-39087822 | None:intergenic | 50.0% | |
| ! | GGATTGACTTTCTTGGGCCA+CGG | + | chr8_1:39087839-39087858 | Msa1192990:intron | 50.0% |
| TGAATGCCTAACTGTTGGGC+TGG | + | chr8_1:39088606-39088625 | Msa1192990:intron | 50.0% | |
| ! | CTGTTGGGCTGGATTTGAGA+TGG | + | chr8_1:39088617-39088636 | Msa1192990:intron | 50.0% |
| ! | ATGGTGGAGTGCATTCGAGA+TGG | - | chr8_1:39088669-39088688 | None:intergenic | 50.0% |
| AATAAACAGTCCGTCCGTCG+AGG | + | chr8_1:39090048-39090067 | Msa1192990:intron | 50.0% | |
| TGAAACGGGGTCAATTTGCC+TGG | - | chr8_1:39090316-39090335 | None:intergenic | 50.0% | |
| GAACTTACAACGCATCGGGT+CGG | - | chr8_1:39090556-39090575 | None:intergenic | 50.0% | |
| AGTTCGTCCGTCGAGGAATA+TGG | + | chr8_1:39091221-39091240 | Msa1192990:intron | 50.0% | |
| GTTCGTCCGTCGAGGAATAT+GGG | + | chr8_1:39091222-39091241 | Msa1192990:intron | 50.0% | |
| AGTTCGTCCGTCGAGGAATA+TGG | + | chr8_1:39091221-39091240 | Msa1192990:intron | 50.0% | |
| GTTCGTCCGTCGAGGAATAT+GGG | + | chr8_1:39091222-39091241 | Msa1192990:intron | 50.0% | |
| CGAGGGAAATAGATCTCCTC+TGG | + | chr8_1:39092494-39092513 | Msa1192990:three_prime_UTR | 50.0% | |
| GGGAAATAGATCTCCTCTGG+TGG | + | chr8_1:39092497-39092516 | Msa1192990:three_prime_UTR | 50.0% | |
| GGAGGTCACACAAGCTTCGT+CGG | + | chr8_1:39085020-39085039 | Msa1192990:CDS | 55.0% | |
| ! | TGCTGTGGTTGTTTGGGACG+TGG | + | chr8_1:39085109-39085128 | Msa1192990:CDS | 55.0% |
| ACGAATCAGGGTCGGCTACA+TGG | - | chr8_1:39085571-39085590 | None:intergenic | 55.0% | |
| ! | ATGTAGCCGACCCTGATTCG+TGG | + | chr8_1:39085570-39085589 | Msa1192990:intron | 55.0% |
| ! | TGTAGCCGACCCTGATTCGT+GGG | + | chr8_1:39085571-39085590 | Msa1192990:intron | 55.0% |
| GAATTGCACGGAGACATGGG+CGG | + | chr8_1:39085792-39085811 | Msa1192990:CDS | 55.0% | |
| !! | CCCACAGGAGAGCTTGTTAC+AGG | + | chr8_1:39085850-39085869 | Msa1192990:CDS | 55.0% |
| TGAAAGTTGGAGCTGGGCTG+TGG | - | chr8_1:39086878-39086897 | None:intergenic | 55.0% | |
| ! | GACGTGCATGTGAAGCATCC+AGG | + | chr8_1:39087091-39087110 | Msa1192990:intron | 55.0% |
| AGTCCGTCCGTCGAGGAATA+TGG | + | chr8_1:39090055-39090074 | Msa1192990:intron | 55.0% | |
| GTCCGTCCGTCGAGGAATAT+GGG | + | chr8_1:39090056-39090075 | Msa1192990:intron | 55.0% | |
| CTCCCATATTCCTCGACGGA+CGG | - | chr8_1:39090061-39090080 | None:intergenic | 55.0% | |
| GGCGGAGTGCACAGCGTAAT+TGG | - | chr8_1:39084872-39084891 | None:intergenic | 60.0% | |
| ACCATCTGCGGCAACAACGG+CGG | + | chr8_1:39084918-39084937 | Msa1192990:CDS | 60.0% | |
| TCCGCCGTTGTTGCCGCAGA+TGG | - | chr8_1:39084922-39084941 | None:intergenic | 65.0% | |
| GAGACATGGGCGGCTCACGA+GGG | + | chr8_1:39085802-39085821 | Msa1192990:CDS | 65.0% | |
| GGAGACATGGGCGGCTCACG+AGG | + | chr8_1:39085801-39085820 | Msa1192990:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 39084827 | 39092863 | 39084827 | ID=Msa1192990;Name=Msa1192990 |
| chr8_1 | mRNA | 39084827 | 39092863 | 39084827 | ID=Msa1192990-mRNA-1;Parent=Msa1192990;Name=Msa1192990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=22|0.81|1|1|0.72|0.91|12|401|468 |
| chr8_1 | exon | 39084827 | 39085225 | 39084827 | ID=Msa1192990-mRNA-1:exon:12791;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39085759 | 39085871 | 39085759 | ID=Msa1192990-mRNA-1:exon:12792;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39086011 | 39086097 | 39086011 | ID=Msa1192990-mRNA-1:exon:12793;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39086435 | 39086495 | 39086435 | ID=Msa1192990-mRNA-1:exon:12794;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39086602 | 39086741 | 39086602 | ID=Msa1192990-mRNA-1:exon:12795;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39087242 | 39087453 | 39087242 | ID=Msa1192990-mRNA-1:exon:12796;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39087569 | 39087638 | 39087569 | ID=Msa1192990-mRNA-1:exon:12797;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39087728 | 39087784 | 39087728 | ID=Msa1192990-mRNA-1:exon:12798;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39090057 | 39090134 | 39090057 | ID=Msa1192990-mRNA-1:exon:12799;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39091223 | 39091300 | 39091223 | ID=Msa1192990-mRNA-1:exon:12800;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39091683 | 39091736 | 39091683 | ID=Msa1192990-mRNA-1:exon:12801;Parent=Msa1192990-mRNA-1 |
| chr8_1 | exon | 39092383 | 39092863 | 39092383 | ID=Msa1192990-mRNA-1:exon:12802;Parent=Msa1192990-mRNA-1 |
| chr8_1 | five_prime_UTR | 39084827 | 39084848 | 39084827 | ID=Msa1192990-mRNA-1:five_prime_utr;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39084849 | 39085225 | 39084849 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39085759 | 39085871 | 39085759 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39086011 | 39086097 | 39086011 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39086435 | 39086495 | 39086435 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39086602 | 39086741 | 39086602 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39087242 | 39087453 | 39087242 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39087569 | 39087638 | 39087569 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39087728 | 39087784 | 39087728 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39090057 | 39090134 | 39090057 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39091223 | 39091300 | 39091223 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39091683 | 39091736 | 39091683 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | CDS | 39092383 | 39092462 | 39092383 | ID=Msa1192990-mRNA-1:cds;Parent=Msa1192990-mRNA-1 |
| chr8_1 | three_prime_UTR | 39092463 | 39092863 | 39092463 | ID=Msa1192990-mRNA-1:three_prime_utr;Parent=Msa1192990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
