AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0439970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0439970 MtrunA17_Chr2g0286291 96.064 1067 15 3 1 1041 1 1066 0.0 2093
Msa0439970 MtrunA17_Chr4g0066741 86.311 1030 106 7 41 1041 40 1063 0.0 1768
Msa0439970 MtrunA17_Chr1g0205891 44.423 529 244 11 180 666 363 883 2.67e-144 459
Msa0439970 MtrunA17_Chr5g0394201 44.697 528 243 11 180 666 350 869 5.04e-144 458
Msa0439970 MtrunA17_Chr5g0403921 43.704 540 239 9 185 665 177 710 1.48e-141 442
Msa0439970 MtrunA17_Chr3g0095091 42.779 547 252 10 180 667 558 1102 1.44e-132 440
Msa0439970 MtrunA17_Chr5g0442141 44.509 519 233 8 180 645 604 1120 7.83e-131 435
Msa0439970 MtrunA17_Chr4g0066651 47.314 484 211 7 181 620 977 1460 9.94e-131 439
Msa0439970 MtrunA17_Chr7g0232121 36.905 588 297 15 188 706 35 617 1.93e-104 347
Msa0439970 MtrunA17_Chr7g0248031 41.075 465 222 5 178 590 979 1443 7.21e-103 356
Msa0439970 MtrunA17_Chr8g0348721 40.430 465 224 6 178 590 972 1435 2.37e-99 345
Msa0439970 MtrunA17_Chr4g0052341 37.843 547 278 12 181 679 733 1265 5.42e-97 338
Msa0439970 MtrunA17_Chr7g0231521 35.390 551 277 11 188 706 35 538 1.38e-94 318
Msa0439970 MtrunA17_Chr1g0175191 44.853 272 142 3 177 440 505 776 3.82e-72 263
Msa0439970 MtrunA17_Chr1g0175191 37.500 304 156 8 329 620 932 1213 8.16e-43 171
Msa0439970 MtrunA17_Chr1g0183681 32.177 519 271 11 161 605 360 871 3.59e-70 255
Msa0439970 MtrunA17_Chr7g0257101 34.118 425 206 8 92 442 417 841 5.46e-67 246
Msa0439970 MtrunA17_Chr7g0257101 48.421 190 91 3 436 623 1162 1346 1.05e-45 179
Msa0439970 MtrunA17_Chr8g0384531 30.162 557 292 15 188 659 380 924 1.02e-60 226
Msa0439970 MtrunA17_Chr5g0393461 31.643 493 237 16 211 616 208 687 1.04e-55 209
Msa0439970 MtrunA17_Chr1g0163011 36.491 285 154 9 177 437 170 451 8.50e-46 177
Msa0439970 MtrunA17_Chr1g0163011 47.977 173 88 2 446 618 549 719 5.55e-36 146
Msa0439970 MtrunA17_Chr4g0017211 30.000 300 182 8 159 436 1418 1711 2.55e-35 146
Msa0439970 MtrunA17_Chr4g0017211 40.230 174 94 4 486 651 1830 2001 2.21e-25 114
Msa0439970 MtrunA17_Chr4g0069451 25.164 457 299 13 185 610 167 611 1.33e-33 138
Msa0439970 MtrunA17_Chr4g0040301 45.033 151 82 1 467 617 379 528 2.30e-32 135
Msa0439970 MtrunA17_Chr4g0040301 29.588 267 156 7 220 458 18 280 2.53e-21 100
Msa0439970 MtrunA17_Chr1g0190381 37.895 190 103 3 464 640 184 371 9.16e-29 122
Msa0439970 MtrunA17_Chr7g0233021 24.845 483 261 12 214 599 691 1168 1.33e-24 111
Msa0439970 MtrunA17_Chr7g0232971 26.705 352 204 6 317 617 904 1252 2.29e-24 110
Msa0439970 MtrunA17_Chr7g0232991 25.994 327 198 6 317 600 272 597 4.75e-22 102
Msa0439970 MtrunA17_Chr1g0168031 28.625 269 145 7 213 440 535 797 1.96e-21 101
Msa0439970 MtrunA17_Chr1g0168031 39.597 149 89 1 461 609 980 1127 1.16e-20 98.6
Msa0439970 MtrunA17_Chr7g0233031 26.163 344 206 7 317 617 861 1199 6.47e-21 99.4
Msa0439970 MtrunA17_Chr7g0264371 25.234 535 302 17 171 649 259 751 1.20e-20 99.0
Msa0439970 MtrunA17_Chr4g0047081 22.880 507 282 12 214 623 702 1196 2.76e-20 97.4
Msa0439970 MtrunA17_Chr4g0024921 40.152 132 76 2 480 609 776 906 2.98e-20 97.1
Msa0439970 MtrunA17_Chr7g0255821 28.571 245 149 5 213 436 251 490 3.91e-20 96.7
Msa0439970 MtrunA17_Chr7g0255821 36.913 149 91 2 464 609 644 792 2.47e-19 94.0
Msa0439970 MtrunA17_Chr7g0225791 23.164 531 289 16 214 656 752 1251 6.00e-20 96.3
Msa0439970 MtrunA17_Chr7g0233001 25.575 348 212 7 317 617 128 475 6.90e-20 94.7
Msa0439970 MtrunA17_Chr1g0212331 41.525 118 68 1 486 603 887 1003 6.26e-19 92.8
Msa0439970 MtrunA17_Chr1g0212331 28.676 136 92 1 309 439 522 657 6.77e-12 70.1
Msa0439970 MtrunA17_Chr2g0281601 35.570 149 94 2 486 633 1150 1297 3.09e-18 90.9
Msa0439970 MtrunA17_Chr2g0281601 27.941 136 93 1 309 439 778 913 3.78e-11 67.8
Msa0439970 MtrunA17_Chr2g0320751 24.742 291 159 6 213 443 399 689 4.20e-18 90.1
Msa0439970 MtrunA17_Chr2g0320751 34.228 149 95 2 477 623 859 1006 8.95e-17 85.9
Msa0439970 MtrunA17_Chr7g0214291 33.129 163 97 4 211 371 1 153 3.83e-16 77.8
Msa0439970 MtrunA17_Chr1g0190391 25.664 226 136 6 182 377 572 795 7.23e-15 79.3
Msa0439970 MtrunA17_Chr2g0326991 31.298 131 86 2 494 620 39 169 1.12e-13 75.9
Msa0439970 MtrunA17_Chr2g0320781 35.833 120 72 1 486 600 111 230 2.33e-13 71.2
Msa0439970 MtrunA17_Chr1g0149871 44.048 84 45 1 190 273 242 323 2.39e-13 72.4
Msa0439970 MtrunA17_Chr3g0086111 31.092 119 81 1 482 600 548 665 3.75e-13 74.3
Msa0439970 MtrunA17_Chr3g0086111 24.354 271 156 10 185 426 180 430 7.34e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0439970 AT3G06400.2 86.373 1020 106 6 41 1027 33 1052 0.0 1734
Msa0439970 AT3G06400.1 86.275 1020 106 7 41 1027 33 1051 0.0 1727
Msa0439970 AT5G18620.2 83.550 1076 138 9 1 1041 1 1072 0.0 1724
Msa0439970 AT3G06400.3 86.106 1022 106 8 41 1027 33 1053 0.0 1722
Msa0439970 AT5G18620.1 83.910 1069 133 9 1 1034 1 1065 0.0 1720
Msa0439970 AT5G19310.2 45.161 527 242 11 180 666 109 628 2.66e-144 452
Msa0439970 AT3G06010.1 45.920 527 239 12 180 666 390 910 3.41e-144 460
Msa0439970 AT5G19310.1 45.161 527 242 11 180 666 373 892 2.02e-141 452
Msa0439970 AT5G66750.1 37.463 670 326 12 93 670 71 739 1.63e-131 417
Msa0439970 AT2G13370.1 42.910 543 254 8 180 667 612 1153 5.84e-131 436
Msa0439970 AT2G13370.2 42.910 543 254 8 180 667 612 1153 5.84e-131 436
Msa0439970 AT2G13370.3 42.910 543 254 8 180 667 612 1153 5.84e-131 436
Msa0439970 AT2G28290.2 47.193 481 210 6 184 620 745 1225 1.64e-130 439
Msa0439970 AT2G28290.3 47.193 481 210 6 184 620 745 1225 2.10e-130 438
Msa0439970 AT2G28290.4 47.193 481 210 6 184 620 745 1225 2.10e-130 438
Msa0439970 AT2G28290.6 47.193 481 210 6 184 620 746 1226 2.10e-130 438
Msa0439970 AT2G28290.5 47.193 481 210 6 184 620 746 1226 2.29e-130 438
Msa0439970 AT2G28290.1 47.193 481 210 6 184 620 745 1225 2.34e-130 438
Msa0439970 AT2G25170.1 42.829 516 236 8 185 649 266 773 1.69e-119 399
Msa0439970 AT2G25170.4 42.829 516 236 8 185 649 266 773 1.69e-119 399
Msa0439970 AT2G25170.2 42.829 516 236 8 185 649 283 790 1.85e-119 399
Msa0439970 AT2G25170.3 42.829 516 236 8 185 649 292 799 5.16e-119 398
Msa0439970 AT4G31900.3 40.644 497 248 7 185 649 218 699 3.34e-108 365
Msa0439970 AT4G31900.2 40.644 497 248 7 185 649 177 658 3.93e-108 364
Msa0439970 AT4G31900.1 40.644 497 248 7 185 649 218 699 4.24e-108 365
Msa0439970 AT2G44980.1 39.583 480 245 10 183 617 38 517 6.17e-106 351
Msa0439970 AT2G44980.3 38.353 498 244 10 183 617 38 535 1.99e-103 345
Msa0439970 AT2G46020.2 42.366 465 216 7 178 590 966 1430 1.08e-101 353
Msa0439970 AT2G46020.3 42.366 465 216 7 178 590 966 1430 1.08e-101 353
Msa0439970 AT2G46020.4 42.366 465 216 7 178 590 966 1430 1.08e-101 353
Msa0439970 AT2G44980.2 38.076 499 245 11 183 617 38 536 3.50e-101 339
Msa0439970 AT2G46020.5 42.151 465 216 8 178 590 966 1429 9.07e-100 347
Msa0439970 AT2G46020.1 42.151 465 216 8 178 590 966 1429 9.07e-100 347
Msa0439970 AT2G46020.6 42.151 465 216 8 178 590 966 1429 9.07e-100 347
Msa0439970 AT5G44800.1 37.063 572 294 12 181 697 677 1237 2.10e-97 340
Msa0439970 AT2G18760.4 32.797 497 255 10 185 609 378 867 1.12e-69 254
Msa0439970 AT2G18760.1 32.797 497 255 10 185 609 378 867 1.12e-69 254
Msa0439970 AT2G18760.2 32.797 497 255 10 185 609 378 867 1.12e-69 254
Msa0439970 AT2G18760.7 32.797 497 255 10 185 609 378 867 1.12e-69 254
Msa0439970 AT2G18760.5 32.797 497 255 10 185 609 378 867 1.12e-69 254
Msa0439970 AT2G18760.6 32.797 497 255 10 185 609 378 867 1.12e-69 254
Msa0439970 AT3G12810.1 43.382 272 146 3 177 440 520 791 1.14e-69 256
Msa0439970 AT3G12810.1 43.056 216 116 3 467 682 1074 1282 1.12e-41 167
Msa0439970 AT3G12810.2 43.382 272 146 3 177 440 516 787 1.21e-69 256
Msa0439970 AT3G12810.2 43.056 216 116 3 467 682 1070 1278 1.17e-41 167
Msa0439970 AT2G18760.3 32.797 497 255 10 185 609 437 926 1.87e-69 254
Msa0439970 AT3G57300.1 32.634 429 210 7 92 442 422 849 1.01e-65 243
Msa0439970 AT3G57300.1 40.164 244 141 3 381 622 1119 1359 2.27e-44 176
Msa0439970 AT3G57300.4 32.634 429 210 7 92 442 422 849 1.01e-65 243
Msa0439970 AT3G57300.4 40.164 244 141 3 381 622 1119 1359 2.27e-44 176
Msa0439970 AT3G57300.3 32.634 429 210 7 92 442 422 849 1.67e-65 242
Msa0439970 AT5G63950.1 31.311 511 267 13 183 612 368 875 1.23e-62 232
Msa0439970 AT3G57300.2 30.303 462 210 7 92 442 422 882 4.48e-62 232
Msa0439970 AT3G57300.2 40.164 244 141 3 381 622 1152 1392 2.20e-44 176
Msa0439970 AT5G63950.2 32.200 500 260 12 183 612 368 858 5.26e-61 227
Msa0439970 AT3G19210.2 29.496 556 291 16 156 616 132 681 3.39e-56 211
Msa0439970 AT3G19210.3 29.211 558 292 16 156 616 132 683 3.96e-56 209
Msa0439970 AT3G19210.1 29.211 558 292 16 156 616 132 683 7.97e-56 210
Msa0439970 AT2G02090.1 38.291 316 155 12 156 437 160 469 2.22e-49 188
Msa0439970 AT2G02090.1 49.693 163 81 1 458 620 578 739 1.15e-37 152
Msa0439970 AT3G54280.1 32.155 283 164 8 159 419 1419 1695 3.96e-37 152
Msa0439970 AT3G54280.1 38.624 189 111 3 486 671 1832 2018 2.90e-25 114
Msa0439970 AT3G54280.2 32.155 283 164 8 159 419 1450 1726 4.25e-37 152
Msa0439970 AT3G54280.2 38.624 189 111 3 486 671 1863 2049 3.19e-25 114
Msa0439970 AT1G03750.1 42.857 154 87 1 464 617 524 676 1.81e-32 136
Msa0439970 AT1G03750.1 30.282 284 172 5 181 441 128 408 6.39e-31 131
Msa0439970 AT1G48310.2 25.541 462 291 14 185 610 170 614 1.87e-29 126
Msa0439970 AT1G48310.1 25.541 462 291 14 185 610 165 609 2.03e-29 126
Msa0439970 AT1G48310.3 25.541 462 291 14 185 610 165 609 4.02e-29 124
Msa0439970 AT5G07810.1 24.165 509 281 15 183 610 195 679 1.76e-28 124
Msa0439970 AT1G08600.1 36.486 222 110 5 431 639 1073 1276 6.96e-28 122
Msa0439970 AT1G08600.1 26.389 288 175 8 182 441 709 987 3.70e-19 94.4
Msa0439970 AT1G08600.4 36.486 222 110 5 431 639 1094 1297 8.04e-28 122
Msa0439970 AT1G08600.4 26.910 301 178 9 182 441 709 1008 8.86e-21 99.8
Msa0439970 AT1G08600.3 36.486 222 110 5 431 639 1094 1297 8.04e-28 122
Msa0439970 AT1G08600.3 26.910 301 178 9 182 441 709 1008 8.86e-21 99.8
Msa0439970 AT1G08600.2 36.486 222 110 5 431 639 1094 1297 8.04e-28 122
Msa0439970 AT1G08600.2 26.910 301 178 9 182 441 709 1008 8.86e-21 99.8
Msa0439970 AT1G05490.1 26.786 336 185 7 317 599 1008 1335 1.43e-23 108
Msa0439970 AT3G24340.1 24.952 521 309 18 196 638 591 1107 1.82e-21 101
Msa0439970 AT5G43530.1 33.473 239 132 8 397 628 1057 1275 2.65e-21 101
Msa0439970 AT5G43530.1 27.737 274 148 8 213 442 683 950 2.82e-20 97.8
Msa0439970 AT5G22750.1 26.460 291 151 6 212 442 414 701 1.74e-20 98.6
Msa0439970 AT5G22750.1 35.849 159 99 2 467 623 862 1019 7.30e-20 96.3
Msa0439970 AT2G21450.2 23.415 568 309 21 146 609 227 772 1.79e-20 98.2
Msa0439970 AT2G21450.1 23.415 568 309 21 146 609 220 765 2.69e-20 97.4
Msa0439970 AT2G21450.3 24.138 522 271 20 192 609 174 674 3.06e-20 97.1
Msa0439970 AT1G05120.2 40.152 132 76 2 480 609 717 847 3.54e-20 97.4
Msa0439970 AT1G05120.1 40.152 132 76 2 480 609 674 804 3.56e-20 97.1
Msa0439970 AT5G05130.1 34.706 170 109 2 472 639 712 881 4.49e-20 97.1
Msa0439970 AT5G05130.1 29.798 198 128 6 245 436 361 553 1.37e-15 82.4
Msa0439970 AT1G11100.5 40.323 124 73 1 486 609 930 1052 4.64e-20 97.1
Msa0439970 AT1G11100.5 24.590 305 165 7 195 439 402 701 1.09e-16 86.3
Msa0439970 AT1G11100.3 40.323 124 73 1 486 609 974 1096 4.79e-20 97.1
Msa0439970 AT1G11100.3 29.412 136 91 1 309 439 610 745 9.85e-11 66.6
Msa0439970 AT1G11100.2 40.323 124 73 1 486 609 1116 1238 7.11e-20 96.7
Msa0439970 AT1G11100.2 29.412 136 91 1 309 439 752 887 7.58e-11 67.0
Msa0439970 AT1G11100.1 40.323 124 73 1 486 609 1073 1195 7.11e-20 96.7
Msa0439970 AT1G11100.1 24.590 305 165 7 195 439 545 844 8.26e-17 86.7
Msa0439970 AT1G11100.4 40.323 124 73 1 486 609 1117 1239 7.49e-20 96.7
Msa0439970 AT1G11100.4 29.412 136 91 1 309 439 753 888 7.71e-11 67.0
Msa0439970 AT1G02670.6 40.152 132 76 2 480 609 504 634 1.06e-19 95.1
Msa0439970 AT1G02670.6 27.574 272 147 8 213 439 118 384 3.24e-19 93.6
Msa0439970 AT5G20420.1 23.166 518 283 17 214 624 714 1223 1.22e-19 95.9
Msa0439970 AT1G02670.1 40.152 132 76 2 480 609 519 649 1.40e-19 94.7
Msa0439970 AT1G02670.1 33.146 178 97 5 213 373 156 328 1.68e-18 91.3
Msa0439970 AT1G02670.3 40.152 132 76 2 480 609 531 661 1.42e-19 95.1
Msa0439970 AT1G02670.3 27.574 272 147 8 213 439 145 411 5.02e-19 93.2
Msa0439970 AT1G02670.7 40.152 132 76 2 480 609 508 638 1.60e-19 94.7
Msa0439970 AT1G02670.7 33.146 178 97 5 213 373 145 317 2.15e-18 91.3
Msa0439970 AT1G02670.4 27.574 272 147 8 213 439 145 411 2.96e-19 93.2
Msa0439970 AT1G61140.3 37.692 130 80 1 480 609 961 1089 3.33e-19 94.4
Msa0439970 AT1G61140.1 37.692 130 80 1 480 609 1119 1247 4.80e-19 94.0
Msa0439970 AT3G20010.3 36.774 155 94 2 486 637 628 781 4.97e-19 93.6
Msa0439970 AT3G20010.3 27.941 136 93 1 309 439 271 406 4.37e-12 70.9
Msa0439970 AT1G02670.5 27.574 272 147 8 213 439 118 384 5.37e-19 92.8
Msa0439970 AT1G02670.5 38.053 113 67 2 480 590 504 615 9.17e-15 79.3
Msa0439970 AT3G20010.2 36.774 155 94 2 486 637 603 756 5.46e-19 93.2
Msa0439970 AT3G20010.2 27.941 136 93 1 309 439 246 381 3.52e-12 71.2
Msa0439970 AT1G02670.2 27.574 272 147 8 213 439 145 411 6.74e-19 92.8
Msa0439970 AT1G02670.2 38.053 113 67 2 480 590 531 642 1.07e-14 79.3
Msa0439970 AT3G20010.1 36.774 155 94 2 486 637 894 1047 6.84e-19 93.2
Msa0439970 AT3G20010.1 27.941 136 93 1 309 439 537 672 6.90e-12 70.5
Msa0439970 AT3G20010.5 36.774 155 94 2 486 637 894 1047 6.84e-19 93.2
Msa0439970 AT3G20010.5 27.941 136 93 1 309 439 537 672 6.90e-12 70.5
Msa0439970 AT3G20010.7 36.774 155 94 2 486 637 894 1047 6.84e-19 93.2
Msa0439970 AT3G20010.7 27.941 136 93 1 309 439 537 672 6.90e-12 70.5
Msa0439970 AT1G50410.2 35.484 155 96 2 486 637 828 981 5.30e-17 87.0
Msa0439970 AT1G50410.1 35.484 155 96 2 486 637 828 981 5.30e-17 87.0
Msa0439970 AT1G50410.3 35.484 155 96 2 486 637 828 981 5.30e-17 87.0
Msa0439970 AT1G48310.4 25.175 286 169 10 185 449 165 426 5.02e-14 76.6
Msa0439970 AT3G20010.4 27.941 136 93 1 309 439 537 672 5.85e-12 70.5
Msa0439970 AT3G20010.6 27.941 136 93 1 309 439 537 672 5.85e-12 70.5
Msa0439970 AT3G20010.8 27.941 136 93 1 309 439 537 672 5.85e-12 70.5
Msa0439970 AT3G16600.1 39.130 92 50 1 512 603 488 573 8.00e-12 69.7
Msa0439970 AT3G42670.4 29.747 158 105 3 467 619 1058 1214 1.25e-11 69.7
Msa0439970 AT3G42670.2 29.747 158 105 3 467 619 1056 1212 1.35e-11 69.7
Msa0439970 AT3G42670.3 29.747 158 105 3 467 619 1056 1212 1.35e-11 69.7
Msa0439970 AT3G42670.1 29.747 158 105 3 467 619 1056 1212 1.35e-11 69.7

Find 235 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCGTCTTCTTCTCCTTTC+AGG 0.140723 3_3:+6458467 None:intergenic
TTCTCACGTTTGCTTATTTC+AGG 0.178782 3_3:+6460006 None:intergenic
ATTGCAAACTATATCTTTAA+TGG 0.191793 3_3:-6457754 Msa0439970:CDS
CAATTTCCAAGAGTTGATTT+TGG 0.201468 3_3:+6457681 None:intergenic
CTCATTCGATTGTATGAAAA+TGG 0.219427 3_3:-6457987 Msa0439970:CDS
TTGTATGAAAATGGAATAAA+TGG 0.226548 3_3:-6457978 Msa0439970:CDS
ATTGGTCACCTTTCGCAAAA+TGG 0.227711 3_3:+6459745 None:intergenic
TGCAGGTAAAATGGTTCTTT+TGG 0.231699 3_3:-6455931 Msa0439970:intron
CAAAATCAACTCTTGGAAAT+TGG 0.232383 3_3:-6457680 Msa0439970:CDS
TCTCCCTCTCATCGTATTCT+TGG 0.237143 3_3:+6452998 None:intergenic
AATTTCATCTGCAGGTAAAA+TGG 0.254979 3_3:-6455940 Msa0439970:intron
GAAAGCTATCGGAAAGAAAT+TGG 0.264807 3_3:-6453356 Msa0439970:CDS
CATGAGTTCAGAGGAATTAA+AGG 0.265913 3_3:-6457723 Msa0439970:CDS
CGCTTCCGCTCCCTTCTTGT+TGG 0.266574 3_3:+6454561 None:intergenic
AATTAAAAGAGCGTGATTCT+AGG 0.282453 3_3:-6455893 Msa0439970:CDS
TGCAGTTGCCTCTTCTCCTT+TGG 0.299411 3_3:+6454970 None:intergenic
GCAGGTCATACCCTTTCTTC+AGG 0.300949 3_3:+6457600 None:intergenic
TTACTTCAAATGGTTAGATT+TGG 0.306067 3_3:-6455058 Msa0439970:CDS
CTAGGAATGCGGGGCTCCTT+TGG 0.306334 3_3:+6454395 None:intergenic
ACAAACTTGGCTATGGGAAC+TGG 0.316885 3_3:-6453146 Msa0439970:CDS
TTCTGTAAATTTCTTCATCT+TGG 0.320780 3_3:+6454937 None:intergenic
GAAAGATACAAGGAATTAAA+TGG 0.323297 3_3:-6453701 Msa0439970:intron
TTGCAAACTATATCTTTAAT+GGG 0.326223 3_3:-6457753 Msa0439970:CDS
CGGGGCTCCTTTGGTTTAGA+AGG 0.330172 3_3:+6454404 None:intergenic
AAATGGAATAAATGGAATTC+TGG 0.335855 3_3:-6457970 Msa0439970:CDS
AAGACAAATTTCTCACTTCC+CGG 0.336877 3_3:+6455626 None:intergenic
CTTGCCAAAGCCCGCTTTGT+CGG 0.344701 3_3:+6452845 None:intergenic
AACACACCTGTGAAAATATA+AGG 0.350522 3_3:+6455868 None:intergenic
TGATGCTTTGGTGATTCAAC+AGG 0.362638 3_3:-6455212 Msa0439970:CDS
AGATGATCTCCTGTTGTATA+AGG 0.362816 3_3:+6456054 None:intergenic
AGAGAGGACTTATTAGTTGC+TGG 0.363725 3_3:-6457483 Msa0439970:CDS
CCTTTACCTGATTCTTCTGA+TGG 0.365156 3_3:+6454116 None:intergenic
CTTTCTTCTGACCTATCCTA+TGG 0.366267 3_3:+6455395 None:intergenic
GAACCCACAAGTTGACTTGC+AGG 0.372363 3_3:-6455431 Msa0439970:CDS
TATCAATATTGTCGCATAGA+TGG 0.373339 3_3:-6455698 Msa0439970:CDS
GGTTAGATTTGGAGCTGAAA+TGG 0.375502 3_3:-6455047 Msa0439970:CDS
TATCACTGGTACACCGCTTC+AGG 0.378704 3_3:-6457292 Msa0439970:intron
ATTCAGAATAACAGAGGAAA+GGG 0.380450 3_3:-6459807 Msa0439970:intron
CACCCTTGTTTAGATTTGAT+TGG 0.381813 3_3:-6453095 Msa0439970:CDS
CGGTTTGTTGAAAGCATCAA+TGG 0.382460 3_3:+6455646 None:intergenic
AAAGCTTGCACTTGATGCTT+TGG 0.383951 3_3:-6455224 Msa0439970:CDS
AAATGTGATTTGCAGGGGCT+TGG 0.393528 3_3:-6457783 Msa0439970:intron
TTTGGGGCAACCACCATATG+AGG 0.393674 3_3:+6457699 None:intergenic
TAAAGATGAGTTACTTCAAA+TGG 0.398547 3_3:-6455068 Msa0439970:CDS
CGCTGAAGAGATGGAAGAAA+AGG 0.403156 3_3:-6453962 Msa0439970:CDS
CTACTTTACGTCGATTTAGT+TGG 0.404886 3_3:-6457410 Msa0439970:CDS
GACTCCGACAAAGCGGGCTT+TGG 0.410665 3_3:-6452849 Msa0439970:CDS
CTAGAGTTGAAGGTACAGTA+TGG 0.414233 3_3:-6453313 Msa0439970:CDS
TTGAAGTCAGATGTTGAGAA+AGG 0.420649 3_3:-6456273 Msa0439970:CDS
CTCAGGGCCTGTGAGAAATA+TGG 0.422800 3_3:-6453806 Msa0439970:CDS
ATCAGTAATTGTACTATCCT+TGG 0.423897 3_3:+6455015 None:intergenic
CATTGATGCTTTCAACAAAC+CGG 0.425535 3_3:-6455645 Msa0439970:CDS
TCCTTGGCAACCCTGAAGAA+AGG 0.427180 3_3:-6457611 Msa0439970:CDS
CTCTGGTGAAAATGACCAAC+AGG 0.427212 3_3:-6456430 Msa0439970:CDS
ACTTACAACTGTGGCATCCT+AGG 0.427830 3_3:+6454377 None:intergenic
TGAGCGGTGAAGAATGAAAA+AGG 0.428163 3_3:+6460703 None:intergenic
AGAATAATCTTCATGAACTT+TGG 0.429841 3_3:-6456521 Msa0439970:CDS
TTGGTCACCTTTCGCAAAAT+GGG 0.431230 3_3:+6459746 None:intergenic
CCTCATTCGGTTGGTAGAAA+AGG 0.433751 3_3:-6453025 Msa0439970:CDS
TGAAGAATGTGACCGATTCA+TGG 0.436345 3_3:-6453266 Msa0439970:intron
TTCTTCATCACAGGTATTCA+AGG 0.437398 3_3:-6458047 Msa0439970:intron
TTCAACCTTCGAAGAAGAAA+TGG 0.438151 3_3:+6456291 None:intergenic
TGGGAACTGGGATGAGTTGA+AGG 0.438529 3_3:-6453133 Msa0439970:CDS
TGTCGCATAGATGGCAATAC+TGG 0.439047 3_3:-6455689 Msa0439970:CDS
CTGCGTGCTGTAAAATTCCT+TGG 0.444257 3_3:-6457627 Msa0439970:CDS
GCAAACCCATCAGAAGAATC+AGG 0.444921 3_3:-6454122 Msa0439970:CDS
ACCAATTGGCTGGACTGAAC+TGG 0.445172 3_3:-6458010 Msa0439970:CDS
TCAACTCGAGCTGGAGGTCT+TGG 0.446039 3_3:-6455596 Msa0439970:CDS
TCCGGCCATTTCTTCTTCGA+AGG 0.446301 3_3:-6456296 Msa0439970:CDS
GATGAGTGGTTTCAAATCTC+TGG 0.446968 3_3:-6456447 Msa0439970:CDS
ACTCACCATGTCAGCTTCAA+TGG 0.448822 3_3:+6459912 None:intergenic
ACCTTCTTCCGACGAAGAAC+AGG 0.450083 3_3:-6460629 Msa0439970:CDS
GAATCCTTGGCTAGAGTTGA+AGG 0.451268 3_3:-6453323 Msa0439970:CDS
CAAAGGAGCCCCGCATTCCT+AGG 0.452855 3_3:-6454394 Msa0439970:CDS
ATTGAGTGAGTTGTATGAAA+AGG 0.453109 3_3:-6454253 Msa0439970:CDS
ATATGCATGGTTCACAAACT+TGG 0.454812 3_3:-6453159 Msa0439970:CDS
GAGCCTGCAAGTCAACTTGT+GGG 0.454984 3_3:+6455428 None:intergenic
CCCTTTCTTCAGGGTTGCCA+AGG 0.460762 3_3:+6457610 None:intergenic
CTGTGGCATCCTAGGAATGC+GGG 0.461445 3_3:+6454385 None:intergenic
CAGGTCATACCCTTTCTTCA+GGG 0.465157 3_3:+6457601 None:intergenic
AGAAGAAGATCAAGAGGAGT+TGG 0.466856 3_3:-6460557 Msa0439970:CDS
ATCAAATTCCTACCATGAAT+CGG 0.468830 3_3:+6453254 None:intergenic
AGGAATTAAAGGCCCTCATA+TGG 0.468875 3_3:-6457712 Msa0439970:CDS
GATTCTGATGCAGATGTTGC+TGG 0.470693 3_3:-6460472 Msa0439970:CDS
AATGAAGAAACAGAAAGTTC+AGG 0.471703 3_3:-6459959 Msa0439970:CDS
CCTGGTCCTCCTTATACAAC+AGG 0.473402 3_3:-6456063 Msa0439970:CDS
AAAAGAAACCATTCTTAAAG+TGG 0.474223 3_3:-6456238 Msa0439970:CDS
TGACATGCCCACTTTAAGAA+TGG 0.474633 3_3:+6456230 None:intergenic
ACCTGTTCTTCGTCGGAAGA+AGG 0.475123 3_3:+6460628 None:intergenic
GTCGGAAGAAGGTTGTTGCT+TGG 0.480197 3_3:+6460639 None:intergenic
TTTCTTCTGACCTATCCTAT+GGG 0.482269 3_3:+6455396 None:intergenic
GTTGCCCCAAAATCAACTCT+TGG 0.485660 3_3:-6457687 Msa0439970:CDS
GCAACATCTGCATCAGAATC+CGG 0.487099 3_3:+6460475 None:intergenic
CTTTACCTGATTCTTCTGAT+GGG 0.490682 3_3:+6454117 None:intergenic
GGTGATTCAACAGGGGCGAT+TGG 0.490770 3_3:-6455203 Msa0439970:CDS
GCCATGGATTCTTGAATTCA+AGG 0.493621 3_3:+6460670 None:intergenic
GATCATCTCATTACCAGTGC+TGG 0.494768 3_3:-6456039 Msa0439970:intron
GCCAGTTCAGTCCAGCCAAT+TGG 0.495284 3_3:+6458009 None:intergenic
ATGGTTCACAAACTTGGCTA+TGG 0.495652 3_3:-6453153 Msa0439970:CDS
TGGACCGCTACAAGAATCCT+TGG 0.496208 3_3:-6453336 Msa0439970:CDS
GTTATGTGGCTTCAGGGAGA+AGG 0.498830 3_3:-6460033 Msa0439970:intron
TTCCGCTTCTTAGCAGAAGA+TGG 0.498955 3_3:+6452809 None:intergenic
CCATGGATTCTTGAATTCAA+GGG 0.500222 3_3:+6460671 None:intergenic
TCATCTCAAAAGAAGTCAAA+AGG 0.500696 3_3:-6459723 Msa0439970:CDS
CAAACTTGGCTATGGGAACT+GGG 0.502338 3_3:-6453145 Msa0439970:CDS
CAACGAAGAAGAAGATCAAG+AGG 0.505297 3_3:-6460563 Msa0439970:CDS
TCAATTGACCGCTGAAGAGA+TGG 0.505378 3_3:-6453971 Msa0439970:CDS
TGAAGTCAGATGTTGAGAAA+GGG 0.506216 3_3:-6456272 Msa0439970:CDS
TACAGTATGGGCAAAACAAA+GGG 0.506250 3_3:-6453300 Msa0439970:CDS
GGAGGTGCGACACCCTCATT+CGG 0.507133 3_3:-6453038 Msa0439970:CDS
CGGTGTTTCAAACACTCGTC+TGG 0.508343 3_3:-6458449 Msa0439970:CDS
CTGCTGAAACCTTCGATGAG+TGG 0.509650 3_3:-6456461 Msa0439970:CDS
TTCTTGTTATCAACTCGAGC+TGG 0.511860 3_3:-6455605 Msa0439970:CDS
ATTAAAAGAGCGTGATTCTA+GGG 0.511880 3_3:-6455892 Msa0439970:CDS
CTTTGTATATCAAGGTCCTC+CGG 0.515296 3_3:-6456314 Msa0439970:intron
AGATGCAATCAAATTTAAGA+TGG 0.515699 3_3:-6454915 Msa0439970:CDS
AATTCTTCACCTCTTCTAGC+AGG 0.516580 3_3:+6453935 None:intergenic
ATGAGGGATTACCAATTGGC+TGG 0.518662 3_3:-6458020 Msa0439970:CDS
GAAGATGAGGGATTACCAAT+TGG 0.519640 3_3:-6458024 Msa0439970:CDS
TGAGCCTGCAAGTCAACTTG+TGG 0.520379 3_3:+6455427 None:intergenic
TGGAATTCTGGCCGATGAGA+TGG 0.520937 3_3:-6457958 Msa0439970:intron
GGTGAAGATGGTGATGATGA+TGG 0.521320 3_3:-6460451 Msa0439970:CDS
GATCTTGAGGTTGTCAATGC+TGG 0.521672 3_3:-6456168 Msa0439970:intron
CCTTGGCAACCCTGAAGAAA+GGG 0.525845 3_3:-6457610 Msa0439970:intron
TGAAATAAGCAAACGTGAGA+AGG 0.526668 3_3:-6460004 Msa0439970:CDS
GCAGATGTTGCTGGTGAAGA+TGG 0.528477 3_3:-6460463 Msa0439970:CDS
TTGCTTGGACAGTTTCGCCA+TGG 0.530196 3_3:+6460654 None:intergenic
TATAAATTTGCAGATATGCA+TGG 0.530856 3_3:-6453172 Msa0439970:intron
GAAGCGGTGTACCAGTGATA+AGG 0.531507 3_3:+6457295 None:intergenic
CGCATAGATGGCAATACTGG+TGG 0.537769 3_3:-6455686 Msa0439970:CDS
CCCTTGAATTCAAGAATCCA+TGG 0.538721 3_3:-6460671 Msa0439970:exon
GCATAGATGGCAATACTGGT+GGG 0.541957 3_3:-6455685 Msa0439970:CDS
ACAAAGTATTGCCTCTGAGA+TGG 0.542123 3_3:-6453771 Msa0439970:CDS
GATGAGATCATGAAAGCTAT+CGG 0.542975 3_3:-6453367 Msa0439970:CDS
GTGAAGATGGTGATGATGAT+GGG 0.543964 3_3:-6460450 Msa0439970:CDS
AACTATCGCCTCCTTATCAC+TGG 0.544314 3_3:-6457306 Msa0439970:CDS
GAAGATTATTTGATGTTCCG+TGG 0.544585 3_3:-6455722 Msa0439970:CDS
CCATCAGAAGAATCAGGTAA+AGG 0.546617 3_3:-6454116 Msa0439970:CDS
TCATACAACTCACTCAATCT+CGG 0.548650 3_3:+6454258 None:intergenic
TCATTCTGTATGATAGTGAC+TGG 0.551238 3_3:-6455547 Msa0439970:intron
TGAGCAGAACTTACCAGCAC+TGG 0.553084 3_3:+6456026 None:intergenic
TGGTTCACAAACTTGGCTAT+GGG 0.556034 3_3:-6453152 Msa0439970:CDS
CAGGTATTCAAGGGAAGATG+AGG 0.556223 3_3:-6458037 Msa0439970:CDS
AACGACATCTTCATCATCAT+CGG 0.556618 3_3:+6460510 None:intergenic
CCTGTTGTATAAGGAGGACC+AGG 0.557129 3_3:+6456063 None:intergenic
ACAATAAACCATACCTGAAG+CGG 0.557476 3_3:+6457279 None:intergenic
ATTTCGACCATATTTCTCAC+AGG 0.558574 3_3:+6453799 None:intergenic
CAAGATCGTGCCCATAGGAT+AGG 0.560836 3_3:-6455406 Msa0439970:CDS
TTATAAAGCATTACTGCAGA+AGG 0.565526 3_3:-6456190 Msa0439970:CDS
AAAGAAACCATTCTTAAAGT+GGG 0.566006 3_3:-6456237 Msa0439970:CDS
AATTCAGAATAACAGAGGAA+AGG 0.573850 3_3:-6459808 Msa0439970:intron
GTCCATCTTCTGCTAAGAAG+CGG 0.577132 3_3:-6452811 Msa0439970:CDS
CCTTGCTCTCTAAAACAATG+AGG 0.577929 3_3:-6457341 Msa0439970:CDS
AATTATTGCCAAAGGAGAAG+AGG 0.577947 3_3:-6454978 Msa0439970:CDS
ACTGGGTTGAACCAACAAGA+AGG 0.579274 3_3:-6454572 Msa0439970:CDS
TTTCTCACAGGCCCTGAGGA+AGG 0.580770 3_3:+6453811 None:intergenic
GAACATGACTCCGACAAAGC+GGG 0.583769 3_3:-6452855 Msa0439970:CDS
TGCGACAATATTGATATCCA+CGG 0.586376 3_3:+6455705 None:intergenic
TTGTTATCAACTCGAGCTGG+AGG 0.587419 3_3:-6455602 Msa0439970:CDS
CACAGATGATTATGCTAGCA+CGG 0.588441 3_3:-6452777 Msa0439970:intron
GGAAGTTGAAAGATATGCAA+AGG 0.589525 3_3:-6453732 Msa0439970:CDS
ATTGATAGAATTATTGCCAA+AGG 0.589651 3_3:-6454986 Msa0439970:CDS
TATGGTACAGTATACGATTG+AGG 0.589998 3_3:-6455272 Msa0439970:intron
GAAGATGAAGAGTACCTGAA+AGG 0.591611 3_3:-6458481 Msa0439970:CDS
TCTTCATCACAGGTATTCAA+GGG 0.594258 3_3:-6458046 Msa0439970:intron
TAGAGTTGAAGGTACAGTAT+GGG 0.594388 3_3:-6453312 Msa0439970:CDS
AAAGGAAGTACGCTATCTCA+TGG 0.596145 3_3:-6454235 Msa0439970:intron
AAAACCAAGAATACGATGAG+AGG 0.596156 3_3:-6453002 Msa0439970:CDS
AGGTGGTCCTTCTAAACCAA+AGG 0.599772 3_3:-6454411 Msa0439970:CDS
GATTTGAAACCACTCATCGA+AGG 0.601191 3_3:+6456452 None:intergenic
ATTACTGCAGAAGGATCTTG+AGG 0.601483 3_3:-6456181 Msa0439970:CDS
GTCAAAAGTGACTGAAGAAG+AGG 0.601809 3_3:-6458503 Msa0439970:CDS
GCACAACACAAGAACTTGCA+AGG 0.601843 3_3:-6453059 Msa0439970:CDS
AGAAGGACCACCTTGCCGCA+TGG 0.601932 3_3:+6454421 None:intergenic
CTCAAAAGAAGTCAAAAGGA+AGG 0.601978 3_3:-6459719 Msa0439970:intron
ACCTTCGAAGAAGAAATGGC+CGG 0.602746 3_3:+6456295 None:intergenic
AGTATTGCCTCTGAGATGGA+AGG 0.603669 3_3:-6453767 Msa0439970:CDS
TGTCGTTGGAGATAATCCTC+CGG 0.608940 3_3:-6460494 Msa0439970:CDS
AGGCTCAAGATCGTGCCCAT+AGG 0.609115 3_3:-6455411 Msa0439970:CDS
ATTGATGCTTTCAACAAACC+GGG 0.609475 3_3:-6455644 Msa0439970:CDS
AGAGTTCACCTGTTCTTCGT+CGG 0.610539 3_3:+6460621 None:intergenic
GTACAGTATGGGCAAAACAA+AGG 0.610911 3_3:-6453301 Msa0439970:CDS
TGATCTCCTGTTGTATAAGG+AGG 0.612764 3_3:+6456057 None:intergenic
AAACCAAGAATACGATGAGA+GGG 0.613365 3_3:-6453001 Msa0439970:CDS
AAAGGAGCGCCTGCTAGAAG+AGG 0.614957 3_3:-6453944 Msa0439970:intron
TTCAAGCAAACCATGCGGCA+AGG 0.616039 3_3:-6454431 Msa0439970:CDS
GTGCGACACCCTCATTCGGT+TGG 0.616347 3_3:-6453034 Msa0439970:CDS
CATAGATGGCAATACTGGTG+GGG 0.619803 3_3:-6455684 Msa0439970:CDS
GGATAGTACAATTACTGATG+AGG 0.622601 3_3:-6455011 Msa0439970:CDS
GATGCTTTGGTGATTCAACA+GGG 0.622713 3_3:-6455211 Msa0439970:CDS
AAACCAATCAAATCTAAACA+AGG 0.624018 3_3:+6453092 None:intergenic
GATGATGATGAAGATGTCGT+TGG 0.624776 3_3:-6460508 Msa0439970:CDS
TTGGGGCAACCACCATATGA+GGG 0.628718 3_3:+6457700 None:intergenic
TCAAACACATACCATCTCAT+CGG 0.629753 3_3:+6457947 None:intergenic
TGCGGCCATTGAAGCTGACA+TGG 0.630337 3_3:-6459917 Msa0439970:intron
GGCTACTTGCATGAGTTCAG+AGG 0.630500 3_3:-6457732 Msa0439970:CDS
TGAAGATGGTGATGATGATG+GGG 0.632862 3_3:-6460449 Msa0439970:CDS
TGTACCTTCAACTCTAGCCA+AGG 0.633332 3_3:+6453319 None:intergenic
CTGGGTTGAACCAACAAGAA+GGG 0.636149 3_3:-6454571 Msa0439970:CDS
GGTCTTCAAAGAAAGATACA+AGG 0.637240 3_3:-6453711 Msa0439970:CDS
TTGAACCAACAAGAAGGGAG+CGG 0.638721 3_3:-6454566 Msa0439970:CDS
CTAGCCAAGGATTCTTGTAG+CGG 0.640982 3_3:+6453332 None:intergenic
ACTGTGGCATCCTAGGAATG+CGG 0.643821 3_3:+6454384 None:intergenic
TGTGGCATCCTAGGAATGCG+GGG 0.645266 3_3:+6454386 None:intergenic
AATATAATTCAGAATAACAG+AGG 0.645673 3_3:-6459813 Msa0439970:intron
AATTAAAGGCCCTCATATGG+TGG 0.647561 3_3:-6457709 Msa0439970:CDS
ATAGATGTTGATGAACCAGA+AGG 0.648695 3_3:-6454088 Msa0439970:intron
AGAACAGGTGAACTCTTCGT+CGG 0.650754 3_3:-6460614 Msa0439970:CDS
ACAGGTGAACTCTTCGTCGG+AGG 0.650762 3_3:-6460611 Msa0439970:CDS
GCGGTGTACCAGTGATAAGG+AGG 0.651703 3_3:+6457298 None:intergenic
ATTGCTGCACAACCTCCTGT+TGG 0.656715 3_3:+6456415 None:intergenic
TCAAGGGTTTGTGTTGTGAG+CGG 0.657033 3_3:+6460687 None:intergenic
AGATGGTGATGATGATGGGG+AGG 0.658670 3_3:-6460446 Msa0439970:intron
CGTGCTAGCATAATCATCTG+TGG 0.659965 3_3:+6452778 None:intergenic
GGAGGCTAGAATTTCTCGGA+AGG 0.661654 3_3:-6453389 Msa0439970:CDS
AACCAATCAAATCTAAACAA+GGG 0.662144 3_3:+6453093 None:intergenic
GATATTAGATGCTCAAAATG+CGG 0.664032 3_3:-6459935 Msa0439970:CDS
CAAAGAGAAGAAACTTGCCA+AGG 0.664058 3_3:-6452965 Msa0439970:intron
TTTGTTGAAAGCATCAATGG+AGG 0.666932 3_3:+6455649 None:intergenic
GGTTGTGCAGCAATTACACA+AGG 0.669375 3_3:-6456406 Msa0439970:intron
AGGTATTCAAGGGAAGATGA+GGG 0.669516 3_3:-6458036 Msa0439970:CDS
ATGCTTTGGTGATTCAACAG+GGG 0.674935 3_3:-6455210 Msa0439970:CDS
TTCAGAATAACAGAGGAAAG+GGG 0.682557 3_3:-6459806 Msa0439970:intron
CATATTTCTCACAGGCCCTG+AGG 0.684289 3_3:+6453807 None:intergenic
AGAACATGACTCCGACAAAG+CGG 0.687228 3_3:-6452856 Msa0439970:CDS
TTCGAAGAAGAAATGGCCGG+AGG 0.691709 3_3:+6456298 None:intergenic
CAACACAAGAACTTGCAAGG+AGG 0.694877 3_3:-6453056 Msa0439970:CDS
TGGTGAAAATGACCAACAGG+AGG 0.699490 3_3:-6456427 Msa0439970:CDS
ACTGTAGAGACATATAAGAG+AGG 0.702563 3_3:-6457499 Msa0439970:intron
AAGCAAACCATGCGGCAAGG+TGG 0.705370 3_3:-6454428 Msa0439970:CDS
ACATCTGCATCAGAATCCGG+AGG 0.708505 3_3:+6460478 None:intergenic
AGTGCATAAACTTACAACTG+TGG 0.709193 3_3:+6454368 None:intergenic
AGAATAACAGAGGAAAGGGG+CGG 0.710228 3_3:-6459803 Msa0439970:CDS
TACCTGAAAGGAGAAGAAGA+CGG 0.728348 3_3:-6458469 Msa0439970:CDS
AATACTTCAAGCAAACCATG+CGG 0.766173 3_3:-6454436 Msa0439970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTAAAATTAT+TGG - chr3_3:6455612-6455631 Msa0439970:CDS 0.0%
!! ATTCTGAATTATATTATATT+AGG + chr3_3:6452683-6452702 None:intergenic 10.0%
!! AAAATTAAAAGAAATTTGAA+AGG + chr3_3:6454154-6454173 None:intergenic 10.0%
!!! AAAGTTAATTTATGATTTTT+AGG - chr3_3:6458306-6458325 Msa0439970:intron 10.0%
!! AATAACTGAATTACATAAAT+TGG + chr3_3:6453146-6453165 None:intergenic 15.0%
!! TAATTAAAATCACAACTATA+AGG + chr3_3:6453722-6453741 None:intergenic 15.0%
!! ATTAATAGAATAAATTCTCA+TGG - chr3_3:6454282-6454301 Msa0439970:CDS 15.0%
!!! TATTTTTATACATCTTCATT+GGG - chr3_3:6455458-6455477 Msa0439970:intron 15.0%
!! AAGAAACAAATAATCAAAAT+TGG + chr3_3:6455499-6455518 None:intergenic 15.0%
!!! ATTATTTGTTTCTTCATTTT+TGG - chr3_3:6455505-6455524 Msa0439970:intron 15.0%
!!! TTATTTGTTTCTTCATTTTT+GGG - chr3_3:6455506-6455525 Msa0439970:intron 15.0%
!! ATGAAATCATTATATAGAAA+AGG + chr3_3:6455661-6455680 None:intergenic 15.0%
!! ACAAAAAAATAATACTAGAA+GGG + chr3_3:6455906-6455925 None:intergenic 15.0%
!! AACAAAAAAATAATACTAGA+AGG + chr3_3:6455907-6455926 None:intergenic 15.0%
!!! ATTGTTAGTTTAATAGATAA+GGG + chr3_3:6457846-6457865 None:intergenic 15.0%
!!! AATTGTTAGTTTAATAGATA+AGG + chr3_3:6457847-6457866 None:intergenic 15.0%
!!! ATTTTTCTTTCTTGAAATAA+AGG - chr3_3:6457867-6457886 Msa0439970:intron 15.0%
!! TAAAATATGCTTAATAAAAC+TGG + chr3_3:6457998-6458017 None:intergenic 15.0%
!!! AACAAATCTTTTAGATTTTT+AGG - chr3_3:6460058-6460077 Msa0439970:intron 15.0%
!!! ACAAATCTTTTAGATTTTTA+GGG - chr3_3:6460059-6460078 Msa0439970:intron 15.0%
!!! TTTGAATAATTTTGCTGTTT+AGG - chr3_3:6452103-6452122 Msa0439970:intron 20.0%
!!! TTAGGTTTTTTTTATAGTCT+AGG - chr3_3:6452121-6452140 Msa0439970:intron 20.0%
!!! TAGGTTTTTTTTATAGTCTA+GGG - chr3_3:6452122-6452141 Msa0439970:intron 20.0%
!! AATATAATTCAGAATAACAG+AGG - chr3_3:6452688-6452707 Msa0439970:intron 20.0%
!! ATATTATTTACGATGTAATG+TGG + chr3_3:6452903-6452922 None:intergenic 20.0%
!!! ATGTACTTTTAAGTTTTCAA+GGG - chr3_3:6452945-6452964 Msa0439970:intron 20.0%
!!! TTGAATATTTAAGTGTTACT+GGG - chr3_3:6453184-6453203 Msa0439970:intron 20.0%
!! AAAATCAAAATATTGACAAC+GGG + chr3_3:6453244-6453263 None:intergenic 20.0%
!! GAAAATCAAAATATTGACAA+CGG + chr3_3:6453245-6453264 None:intergenic 20.0%
!!! GTTGTCAATATTTTGATTTT+CGG - chr3_3:6453244-6453263 Msa0439970:intron 20.0%
!!! AATTAAGCATTTGAAACTAA+AGG - chr3_3:6453737-6453756 Msa0439970:CDS 20.0%
!! ATGAATTATGTAGAATCTTA+TGG - chr3_3:6453827-6453846 Msa0439970:CDS 20.0%
!!! TTTAATGTTGTCTATTTTAG+TGG - chr3_3:6453966-6453985 Msa0439970:CDS 20.0%
!! ATGCATCATATATGTAAAAA+AGG + chr3_3:6454177-6454196 None:intergenic 20.0%
!! TTGTATGAAAATGGAATAAA+TGG - chr3_3:6454523-6454542 Msa0439970:intron 20.0%
!! ATTGCAAACTATATCTTTAA+TGG - chr3_3:6454747-6454766 Msa0439970:intron 20.0%
!! TTGCAAACTATATCTTTAAT+GGG - chr3_3:6454748-6454767 Msa0439970:intron 20.0%
!!! TTTTTCGGGTTTAATTATTT+TGG - chr3_3:6454924-6454943 Msa0439970:CDS 20.0%
!! AATCTGATTAAATCTTCAAA+TGG - chr3_3:6455379-6455398 Msa0439970:CDS 20.0%
!!! CTATTTTTATACATCTTCAT+TGG - chr3_3:6455457-6455476 Msa0439970:intron 20.0%
!! AACAAATAATCAAAATTGGT+CGG + chr3_3:6455495-6455514 None:intergenic 20.0%
!! CTATATAATGATTTCATTAG+AGG - chr3_3:6455664-6455683 Msa0439970:CDS 20.0%
!!! ATTGCTGAATTATGTTTTTT+TGG - chr3_3:6455848-6455867 Msa0439970:intron 20.0%
!!! TTGCTGAATTATGTTTTTTT+GGG - chr3_3:6455849-6455868 Msa0439970:intron 20.0%
!! TTATTCTGTACCAATAAAAA+AGG + chr3_3:6455967-6455986 None:intergenic 20.0%
!!! TTAAGAATGGTTTCTTTTTT+CGG + chr3_3:6456261-6456280 None:intergenic 20.0%
!!! TTTTAGCTTTGAAACAATAA+TGG - chr3_3:6457635-6457654 Msa0439970:CDS 20.0%
!!! TGAAAGCATAAAATAAAACT+TGG + chr3_3:6457671-6457690 None:intergenic 20.0%
!!! TTGTTAGTTTAATAGATAAG+GGG + chr3_3:6457845-6457864 None:intergenic 20.0%
!!! ATATTTTATGACATGATATG+CGG - chr3_3:6458010-6458029 Msa0439970:CDS 20.0%
!!! AAAATAATTAAGTACTGAAC+AGG + chr3_3:6458348-6458367 None:intergenic 20.0%
!! TAACAGTATAAAAGACAAAA+AGG + chr3_3:6458471-6458490 None:intergenic 20.0%
!!! TATTTTTGAGTTTTGTCATT+TGG - chr3_3:6458624-6458643 Msa0439970:intron 20.0%
!!! TTTTGTTGTATATTTGAACA+TGG - chr3_3:6458861-6458880 Msa0439970:intron 20.0%
!! ATATAAGATTTACAAAACCA+TGG + chr3_3:6459301-6459320 None:intergenic 20.0%
!! ATATCTGCAAATTTATAGTA+GGG + chr3_3:6459326-6459345 None:intergenic 20.0%
!! TTTAAATATCAGTTTGAGTA+GGG - chr3_3:6459994-6460013 Msa0439970:CDS 20.0%
!!! AAATCTAAAAGATTTGTTAG+TGG + chr3_3:6460056-6460075 None:intergenic 20.0%
!! ATTATCAAAGTGGAATTATT+TGG + chr3_3:6460305-6460324 None:intergenic 20.0%
!!! CAATGTTTTTATTATCAAAG+TGG + chr3_3:6460315-6460334 None:intergenic 20.0%
!!! ATACATTTTCAAAGAAAAGT+AGG - chr3_3:6460473-6460492 Msa0439970:CDS 20.0%
!!! ACTTCTAAACTACTTTGTTT+TGG - chr3_3:6452628-6452647 Msa0439970:intron 25.0%
! AGCATAATAGTAGTAATCTT+GGG + chr3_3:6452820-6452839 None:intergenic 25.0%
! TAGCATAATAGTAGTAATCT+TGG + chr3_3:6452821-6452840 None:intergenic 25.0%
!!! CATGTACTTTTAAGTTTTCA+AGG - chr3_3:6452944-6452963 Msa0439970:intron 25.0%
! CATTAAATAATTGAACATCC+AGG - chr3_3:6453017-6453036 Msa0439970:CDS 25.0%
! AATCACTAAATAAATAGCCT+AGG + chr3_3:6453050-6453069 None:intergenic 25.0%
! TACATAAATTGGATTTGAAC+AGG + chr3_3:6453135-6453154 None:intergenic 25.0%
!! TTATTATGTGTCATTAAGTC+TGG - chr3_3:6453161-6453180 Msa0439970:CDS 25.0%
! GTTGAATATTTAAGTGTTAC+TGG - chr3_3:6453183-6453202 Msa0439970:intron 25.0%
! AAAAACTTCCAAAAACAAAC+GGG + chr3_3:6453474-6453493 None:intergenic 25.0%
! GAAAAACTTCCAAAAACAAA+CGG + chr3_3:6453475-6453494 None:intergenic 25.0%
!!! TTTGTTTTTGGAAGTTTTTC+TGG - chr3_3:6453475-6453494 Msa0439970:intron 25.0%
!!! TTGTTTTTGGAAGTTTTTCT+GGG - chr3_3:6453476-6453495 Msa0439970:intron 25.0%
! TGTACGAGCATTAATTTATA+AGG - chr3_3:6453788-6453807 Msa0439970:CDS 25.0%
!!! AATCTTGATTTTAACTACCT+TGG - chr3_3:6453891-6453910 Msa0439970:intron 25.0%
! TTTGAAAGGCAAATATAATG+TGG + chr3_3:6454140-6454159 None:intergenic 25.0%
!! TTTTTCATAACTCATGATGT+TGG - chr3_3:6454247-6454266 Msa0439970:CDS 25.0%
!! CTTTTACTTGATTCTTTTTC+TGG - chr3_3:6454323-6454342 Msa0439970:intron 25.0%
! AAATGGAATAAATGGAATTC+TGG - chr3_3:6454531-6454550 Msa0439970:intron 25.0%
!! GAGTTGATTTATGTCTTAAT+CGG - chr3_3:6454651-6454670 Msa0439970:intron 25.0%
!! ACAAATAAATGTGATTTGCA+GGG - chr3_3:6454712-6454731 Msa0439970:intron 25.0%
!!! AATTTCCAAGAGTTGATTTT+GGG + chr3_3:6454822-6454841 None:intergenic 25.0%
!!! TTGTGTTACAAGTTTTGAAA+TGG - chr3_3:6455053-6455072 Msa0439970:CDS 25.0%
! AACTACTTCCATATTTAGAA+TGG + chr3_3:6455309-6455328 None:intergenic 25.0%
! AATGATTGCACTGAAAAAAT+TGG + chr3_3:6455337-6455356 None:intergenic 25.0%
! ACAAATAATCAAAATTGGTC+GGG + chr3_3:6455494-6455513 None:intergenic 25.0%
!! ATTTTGTTAACAGTCAAATG+AGG - chr3_3:6455717-6455736 Msa0439970:CDS 25.0%
!!! TTGTTATTTAGTGTTCTTGT+TGG - chr3_3:6455801-6455820 Msa0439970:intron 25.0%
!! TTTGGGATTATTCATAATTG+CGG - chr3_3:6455866-6455885 Msa0439970:intron 25.0%
! AAAATAATACTAGAAGGGAA+GGG + chr3_3:6455901-6455920 None:intergenic 25.0%
! AAAAATAATACTAGAAGGGA+AGG + chr3_3:6455902-6455921 None:intergenic 25.0%
! AGAATAATCTTCATGAACTT+TGG - chr3_3:6455980-6455999 Msa0439970:intron 25.0%
! TTCATTTCCTTTGTATATCA+AGG - chr3_3:6456179-6456198 Msa0439970:CDS 25.0%
! AAAAGAAACCATTCTTAAAG+TGG - chr3_3:6456263-6456282 Msa0439970:CDS 25.0%
! AAAGAAACCATTCTTAAAGT+GGG - chr3_3:6456264-6456283 Msa0439970:CDS 25.0%
! AAATGAGAACTATTGCAAAT+GGG + chr3_3:6456713-6456732 None:intergenic 25.0%
! TAAATGAGAACTATTGCAAA+TGG + chr3_3:6456714-6456733 None:intergenic 25.0%
!! AAGTTTAAAATTGCAAACCT+CGG + chr3_3:6457156-6457175 None:intergenic 25.0%
!! TTGCAATTTTAAACTTCATC+TGG - chr3_3:6457160-6457179 Msa0439970:intron 25.0%
!!! TTTCTTGTTTCTTTTCTACA+TGG - chr3_3:6457354-6457373 Msa0439970:CDS 25.0%
!!! CAATTGTTTTATATATGCAG+CGG - chr3_3:6457406-6457425 Msa0439970:CDS 25.0%
! TAAAGATGAGTTACTTCAAA+TGG - chr3_3:6457433-6457452 Msa0439970:CDS 25.0%
! TTACTTCAAATGGTTAGATT+TGG - chr3_3:6457443-6457462 Msa0439970:CDS 25.0%
! ATTGATAGAATTATTGCCAA+AGG - chr3_3:6457515-6457534 Msa0439970:intron 25.0%
! TTCTGTAAATTTCTTCATCT+TGG + chr3_3:6457567-6457586 None:intergenic 25.0%
! AGATGCAATCAAATTTAAGA+TGG - chr3_3:6457586-6457605 Msa0439970:intron 25.0%
!!! GTTATACGATTTTGATGATA+AGG - chr3_3:6457747-6457766 Msa0439970:CDS 25.0%
!! TGTTAGTTTAATAGATAAGG+GGG + chr3_3:6457844-6457863 None:intergenic 25.0%
! AAAAAATTGTGAGTGAAAAC+TGG - chr3_3:6457911-6457930 Msa0439970:intron 25.0%
! AAAAATTGTGAGTGAAAACT+GGG - chr3_3:6457912-6457931 Msa0439970:intron 25.0%
! ACTGGATGCATAAAATTTAA+AGG + chr3_3:6457980-6457999 None:intergenic 25.0%
!! TATTTGACAGACTAATGTTT+TGG - chr3_3:6458443-6458462 Msa0439970:CDS 25.0%
! GAAAGATACAAGGAATTAAA+TGG - chr3_3:6458800-6458819 Msa0439970:intron 25.0%
! CGATTCAAATTGAACAAATT+AGG + chr3_3:6459048-6459067 None:intergenic 25.0%
! AATTATCAAAAACATCGAGA+GGG - chr3_3:6459088-6459107 Msa0439970:intron 25.0%
! CATATCTGCAAATTTATAGT+AGG + chr3_3:6459327-6459346 None:intergenic 25.0%
! TATAAATTTGCAGATATGCA+TGG - chr3_3:6459329-6459348 Msa0439970:intron 25.0%
! AACCAATCAAATCTAAACAA+GGG + chr3_3:6459411-6459430 None:intergenic 25.0%
! AAACCAATCAAATCTAAACA+AGG + chr3_3:6459412-6459431 None:intergenic 25.0%
! CTTTAAATATCAGTTTGAGT+AGG - chr3_3:6459993-6460012 Msa0439970:CDS 25.0%
! TTACTACAGAATAGTGATAA+AGG + chr3_3:6460104-6460123 None:intergenic 25.0%
!! TAATGTTTTGTAAGTAAGGT+TGG - chr3_3:6460137-6460156 Msa0439970:intron 25.0%
! ATCTATAACATGTTTATTGC+CGG - chr3_3:6460262-6460281 Msa0439970:intron 25.0%
! GAATTATTTGGTAAATGACA+TGG + chr3_3:6460293-6460312 None:intergenic 25.0%
!! TTATTTGTGTGACAACTTTT+AGG - chr3_3:6460444-6460463 Msa0439970:intron 25.0%
!! TTTCACTTTCTCTATTGTTT+TGG + chr3_3:6460513-6460532 None:intergenic 25.0%
!!! GTCTAGGGTTTGTAATTTTT+TGG - chr3_3:6452137-6452156 Msa0439970:intron 30.0%
!! GTTGACTTGAGTTGAAAATT+TGG - chr3_3:6452220-6452239 Msa0439970:intron 30.0%
!!! GTTGCTTACTTTTTGTTATG+TGG - chr3_3:6452454-6452473 Msa0439970:intron 30.0%
AATGAAGAAACAGAAAGTTC+AGG - chr3_3:6452542-6452561 Msa0439970:intron 30.0%
GATATTAGATGCTCAAAATG+CGG - chr3_3:6452566-6452585 Msa0439970:intron 30.0%
AATTCAGAATAACAGAGGAA+AGG - chr3_3:6452693-6452712 Msa0439970:intron 30.0%
ATTCAGAATAACAGAGGAAA+GGG - chr3_3:6452694-6452713 Msa0439970:intron 30.0%
!!! TTGACTTCTTTTGAGATGAT+TGG + chr3_3:6452777-6452796 None:intergenic 30.0%
TCATCTCAAAAGAAGTCAAA+AGG - chr3_3:6452778-6452797 Msa0439970:CDS 30.0%
TATTTACGATGTAATGTGGA+TGG + chr3_3:6452899-6452918 None:intergenic 30.0%
ATGAAACTTTGACACAATGA+AGG + chr3_3:6452927-6452946 None:intergenic 30.0%
CTTGCCATATAAACGAAATT+TGG + chr3_3:6452976-6452995 None:intergenic 30.0%
CAAATTTCGTTTATATGGCA+AGG - chr3_3:6452974-6452993 Msa0439970:CDS 30.0%
AGGAAATTGTAGAAACATAC+TGG - chr3_3:6452994-6453013 Msa0439970:CDS 30.0%
TAAATAATTGAACATCCAGG+CGG - chr3_3:6453020-6453039 Msa0439970:CDS 30.0%
! GATTGCAAAAAGTTTTTCCA+TGG + chr3_3:6453406-6453425 None:intergenic 30.0%
CTGTTTCCACTTTATCTATT+GGG - chr3_3:6453528-6453547 Msa0439970:intron 30.0%
GAATAAACATTAGTGAGAGA+AGG + chr3_3:6453767-6453786 None:intergenic 30.0%
ATACAGGATAAAGTTAATGC+CGG + chr3_3:6453928-6453947 None:intergenic 30.0%
! CCAGATAAGTTTGTTTATAC+AGG + chr3_3:6453944-6453963 None:intergenic 30.0%
CCTGTATAAACAAACTTATC+TGG - chr3_3:6453941-6453960 Msa0439970:intron 30.0%
GAGAAAGAACATTTACATGA+TGG + chr3_3:6454086-6454105 None:intergenic 30.0%
ATAACTCATGATGTTGGATA+AGG - chr3_3:6454253-6454272 Msa0439970:CDS 30.0%
TAACTCATGATGTTGGATAA+GGG - chr3_3:6454254-6454273 Msa0439970:CDS 30.0%
! TTACTTGATTCTTTTTCTGG+TGG - chr3_3:6454326-6454345 Msa0439970:intron 30.0%
GTCAGAGTGTAAAAAATACT+AGG + chr3_3:6454400-6454419 None:intergenic 30.0%
AAATGTGTATTCTTCATCAC+AGG - chr3_3:6454445-6454464 Msa0439970:CDS 30.0%
CTCATTCGATTGTATGAAAA+TGG - chr3_3:6454514-6454533 Msa0439970:intron 30.0%
!! AGATGGTATGTGTTTGATTT+TGG - chr3_3:6454560-6454579 Msa0439970:CDS 30.0%
!! GATGGTATGTGTTTGATTTT+GGG - chr3_3:6454561-6454580 Msa0439970:CDS 30.0%
! GACAAATAAATGTGATTTGC+AGG - chr3_3:6454711-6454730 Msa0439970:intron 30.0%
! CAAATAAATGTGATTTGCAG+GGG - chr3_3:6454713-6454732 Msa0439970:intron 30.0%
!! ATTTCCAAGAGTTGATTTTG+GGG + chr3_3:6454821-6454840 None:intergenic 30.0%
!! CAATTTCCAAGAGTTGATTT+TGG + chr3_3:6454823-6454842 None:intergenic 30.0%
CAAAATCAACTCTTGGAAAT+TGG - chr3_3:6454821-6454840 Msa0439970:intron 30.0%
ATAATTAAACCCGAAAAAGC+AGG + chr3_3:6454922-6454941 None:intergenic 30.0%
!!! AAGTTTTGAAATGGCTATCA+AGG - chr3_3:6455062-6455081 Msa0439970:CDS 30.0%
CATTGCTAAATTTCTAATCG+TGG - chr3_3:6455434-6455453 Msa0439970:CDS 30.0%
AGAAACTGTGATTACAGTAA+GGG - chr3_3:6455566-6455585 Msa0439970:CDS 30.0%
ATTATATAGAAAAGGTTCCC+TGG + chr3_3:6455653-6455672 None:intergenic 30.0%
GCTGATATATAACTTTGCAT+TGG - chr3_3:6455764-6455783 Msa0439970:intron 30.0%
!!! CTGTTCATGACCTTTTTTAT+TGG - chr3_3:6455954-6455973 Msa0439970:intron 30.0%
TCAGCAGAACTAAAAATTTC+AGG + chr3_3:6456027-6456046 None:intergenic 30.0%
ATCAGACTAAAAGTAAAGAC+GGG + chr3_3:6456145-6456164 None:intergenic 30.0%
CATCAGACTAAAAGTAAAGA+CGG + chr3_3:6456146-6456165 None:intergenic 30.0%
! TTATAAAGCATTACTGCAGA+AGG - chr3_3:6456311-6456330 Msa0439970:intron 30.0%
! AATCATCCATATCTTTTCCA+AGG - chr3_3:6456408-6456427 Msa0439970:CDS 30.0%
GTTGTAATAATTTCATCTGC+AGG - chr3_3:6456553-6456572 Msa0439970:intron 30.0%
AATTTCATCTGCAGGTAAAA+TGG - chr3_3:6456561-6456580 Msa0439970:intron 30.0%
!!! GAATCACGCTCTTTTAATTT+AGG + chr3_3:6456607-6456626 None:intergenic 30.0%
! AATTAAAAGAGCGTGATTCT+AGG - chr3_3:6456608-6456627 Msa0439970:intron 30.0%
! ATTAAAAGAGCGTGATTCTA+GGG - chr3_3:6456609-6456628 Msa0439970:intron 30.0%
AACACACCTGTGAAAATATA+AGG + chr3_3:6456636-6456655 None:intergenic 30.0%
TATCAATATTGTCGCATAGA+TGG - chr3_3:6456803-6456822 Msa0439970:intron 30.0%
TTAACAAGCCGTAATGATTA+TGG + chr3_3:6457028-6457047 None:intergenic 30.0%
!! AATCATTACGGCTTGTTAAA+TGG - chr3_3:6457029-6457048 Msa0439970:intron 30.0%
ACTGTATGGTTCATCTAATA+TGG - chr3_3:6457380-6457399 Msa0439970:CDS 30.0%
CTGTATGGTTCATCTAATAT+GGG - chr3_3:6457381-6457400 Msa0439970:CDS 30.0%
CGCTGCATATATAAAACAAT+TGG + chr3_3:6457408-6457427 None:intergenic 30.0%
ATCAGTAATTGTACTATCCT+TGG + chr3_3:6457489-6457508 None:intergenic 30.0%
CTTTCAGCTGTTTATTAGTT+TGG - chr3_3:6457685-6457704 Msa0439970:CDS 30.0%
!!! ACATGATATGCGGATTTTTT+GGG - chr3_3:6458020-6458039 Msa0439970:CDS 30.0%
ATTGAGTGAGTTGTATGAAA+AGG - chr3_3:6458248-6458267 Msa0439970:intron 30.0%
ATGATGTATTGAATGTTCAG+AGG - chr3_3:6458500-6458519 Msa0439970:CDS 30.0%
! TGAAAGTCTAGTTTGCAAAA+AGG + chr3_3:6458596-6458615 None:intergenic 30.0%
TTGCAAACTAGACTTTCATA+TGG - chr3_3:6458598-6458617 Msa0439970:intron 30.0%
!! TTTTGTCATTTGGTCAATGT+AGG - chr3_3:6458634-6458653 Msa0439970:intron 30.0%
! TTTGTCATTTGGTCAATGTA+GGG - chr3_3:6458635-6458654 Msa0439970:intron 30.0%
!!! GGAAGGTGTTAAAATCTTTT+CGG + chr3_3:6458676-6458695 None:intergenic 30.0%
GAATTATCAAAAACATCGAG+AGG - chr3_3:6459087-6459106 Msa0439970:intron 30.0%
ATTATCAAAAACATCGAGAG+GGG - chr3_3:6459089-6459108 Msa0439970:intron 30.0%
ATCAAATTCCTACCATGAAT+CGG + chr3_3:6459250-6459269 None:intergenic 30.0%
AAGATTTACAAAACCATGGA+AGG + chr3_3:6459297-6459316 None:intergenic 30.0%
ATAAACAGAGAAACTAACCT+TGG + chr3_3:6459556-6459575 None:intergenic 30.0%
AAAGCCAACACAATTAATAG+TGG + chr3_3:6459977-6459996 None:intergenic 30.0%
TTCTGTAGTAATTATGCACT+AGG - chr3_3:6460113-6460132 Msa0439970:intron 30.0%
! AGGCTAATGTTTTGTAAGTA+AGG - chr3_3:6460133-6460152 Msa0439970:intron 30.0%
ACTTGTGTAAGTAAAACTCT+TGG - chr3_3:6460219-6460238 Msa0439970:intron 30.0%
!!! ACCACAAGTTATTGTTTTTG+AGG - chr3_3:6460405-6460424 Msa0439970:intron 30.0%
ACCTCAAAAACAATAACTTG+TGG + chr3_3:6460409-6460428 None:intergenic 30.0%
AAGAAAAGTAGGTATTAGCA+TGG - chr3_3:6460484-6460503 Msa0439970:CDS 30.0%
!!! GATAGTATGTCATTTTGTCT+TGG - chr3_3:6460669-6460688 Msa0439970:exon 30.0%
CCATGGATTCTTGAATTCAA+GGG + chr3_3:6451833-6451852 None:intergenic 35.0%
AACGACATCTTCATCATCAT+CGG + chr3_3:6451994-6452013 None:intergenic 35.0%
!! GCATGTTTTGTTATGAGACT+TGG - chr3_3:6452174-6452193 Msa0439970:intron 35.0%
GATTAGTAGTAGAGAATACC+CGG + chr3_3:6452363-6452382 None:intergenic 35.0%
!! ACTTTTTGTTATGTGGCTTC+AGG - chr3_3:6452461-6452480 Msa0439970:intron 35.0%
!! CTTTTTGTTATGTGGCTTCA+GGG - chr3_3:6452462-6452481 Msa0439970:intron 35.0%
TTCTCACGTTTGCTTATTTC+AGG + chr3_3:6452498-6452517 None:intergenic 35.0%
TGAAATAAGCAAACGTGAGA+AGG - chr3_3:6452497-6452516 Msa0439970:intron 35.0%
TTCAGAATAACAGAGGAAAG+GGG - chr3_3:6452695-6452714 Msa0439970:intron 35.0%
CTCAAAAGAAGTCAAAAGGA+AGG - chr3_3:6452782-6452801 Msa0439970:CDS 35.0%
CTCTGAGCAATAACAGAAAA+AGG + chr3_3:6452863-6452882 None:intergenic 35.0%
!!! CTTTTAAGTTTTCAAGGGTG+TGG - chr3_3:6452950-6452969 Msa0439970:intron 35.0%
GTGGCCAAATTTCGTTTATA+TGG - chr3_3:6452969-6452988 Msa0439970:CDS 35.0%
TGATTCAGATTGTTATGCAG+AGG - chr3_3:6453065-6453084 Msa0439970:CDS 35.0%
AAAATATTGACAACGGGCAT+GGG + chr3_3:6453238-6453257 None:intergenic 35.0%
TGCAAGAGTCTACAATTTCA+TGG - chr3_3:6453322-6453341 Msa0439970:CDS 35.0%
GCAAGAGTCTACAATTTCAT+GGG - chr3_3:6453323-6453342 Msa0439970:CDS 35.0%
ATTCTGCATACACACGAAAT+CGG + chr3_3:6453355-6453374 None:intergenic 35.0%
ATTTCGTGTGTATGCAGAAT+CGG - chr3_3:6453355-6453374 Msa0439970:CDS 35.0%
AAGATCATGTGAAATTGCCA+TGG - chr3_3:6453386-6453405 Msa0439970:CDS 35.0%
CCAATAGATAAAGTGGAAAC+AGG + chr3_3:6453530-6453549 None:intergenic 35.0%
CCTGTTTCCACTTTATCTAT+TGG - chr3_3:6453527-6453546 Msa0439970:intron 35.0%
AGTAAGTGAAACGACACAAT+GGG + chr3_3:6453555-6453574 None:intergenic 35.0%
! ACACTATTCCCTTTGTTTCA+TGG - chr3_3:6453579-6453598 Msa0439970:intron 35.0%
! CACTATTCCCTTTGTTTCAT+GGG - chr3_3:6453580-6453599 Msa0439970:intron 35.0%
AGATTCACCCATGAAACAAA+GGG + chr3_3:6453590-6453609 None:intergenic 35.0%
ACAAAAATAGAGCACAAGAG+AGG + chr3_3:6453632-6453651 None:intergenic 35.0%
! TCATAATTTCATAAGAGCGC+AGG + chr3_3:6453672-6453691 None:intergenic 35.0%
AGCGTAGTAAAATCCTAACA+CGG + chr3_3:6453854-6453873 None:intergenic 35.0%
!! TGTGTTCTAGAAATGCATTC+TGG - chr3_3:6454368-6454387 Msa0439970:intron 35.0%
!!! ATTTTTTACACTCTGACCTC+TGG - chr3_3:6454403-6454422 Msa0439970:CDS 35.0%
TTCTTCATCACAGGTATTCA+AGG - chr3_3:6454454-6454473 Msa0439970:intron 35.0%
TCTTCATCACAGGTATTCAA+GGG - chr3_3:6454455-6454474 Msa0439970:intron 35.0%
TCAAACACATACCATCTCAT+CGG + chr3_3:6454557-6454576 None:intergenic 35.0%
TTAATCGGCGTCTATGTTAT+TGG - chr3_3:6454666-6454685 Msa0439970:intron 35.0%
CATGAGTTCAGAGGAATTAA+AGG - chr3_3:6454778-6454797 Msa0439970:intron 35.0%
! AATTTTACAGCACGCAGAAT+AGG + chr3_3:6454871-6454890 None:intergenic 35.0%
ACTGTAGAGACATATAAGAG+AGG - chr3_3:6455002-6455021 Msa0439970:CDS 35.0%
!! CTACTTTACGTCGATTTAGT+TGG - chr3_3:6455091-6455110 Msa0439970:intron 35.0%
ACAATAAACCATACCTGAAG+CGG + chr3_3:6455225-6455244 None:intergenic 35.0%
TCAGCGAACCATTCTAAATA+TGG - chr3_3:6455298-6455317 Msa0439970:intron 35.0%
TTGCACTGAAAAAATTGGCA+TGG + chr3_3:6455332-6455351 None:intergenic 35.0%
!! AAACTGTTAGAAGTGTTGGA+GGG - chr3_3:6455404-6455423 Msa0439970:CDS 35.0%
CAGAAACTGTGATTACAGTA+AGG - chr3_3:6455565-6455584 Msa0439970:CDS 35.0%
TTCAACCTTCGAAGAAGAAA+TGG + chr3_3:6456213-6456232 None:intergenic 35.0%
TTGAAGTCAGATGTTGAGAA+AGG - chr3_3:6456228-6456247 Msa0439970:CDS 35.0%
TGAAGTCAGATGTTGAGAAA+GGG - chr3_3:6456229-6456248 Msa0439970:CDS 35.0%
!!! AGAATGGTTTCTTTTTTCGG+TGG + chr3_3:6456258-6456277 None:intergenic 35.0%
AGATGATCTCCTGTTGTATA+AGG + chr3_3:6456450-6456469 None:intergenic 35.0%
! TGCAGGTAAAATGGTTCTTT+TGG - chr3_3:6456570-6456589 Msa0439970:intron 35.0%
! TAGGGTCCTTATATTTTCAC+AGG - chr3_3:6456627-6456646 Msa0439970:intron 35.0%
GAAGATTATTTGATGTTCCG+TGG - chr3_3:6456779-6456798 Msa0439970:intron 35.0%
TGCGACAATATTGATATCCA+CGG + chr3_3:6456799-6456818 None:intergenic 35.0%
!! TTTGTTGAAAGCATCAATGG+AGG + chr3_3:6456855-6456874 None:intergenic 35.0%
CATTGATGCTTTCAACAAAC+CGG - chr3_3:6456856-6456875 Msa0439970:intron 35.0%
ATTGATGCTTTCAACAAACC+GGG - chr3_3:6456857-6456876 Msa0439970:intron 35.0%
AAGACAAATTTCTCACTTCC+CGG + chr3_3:6456878-6456897 None:intergenic 35.0%
! TCATTCTGTATGATAGTGAC+TGG - chr3_3:6456954-6456973 Msa0439970:intron 35.0%
! TGACTGGTCAGTATTTCAAA+CGG - chr3_3:6456970-6456989 Msa0439970:intron 35.0%
TACCTGTGCCATAATCATTA+CGG - chr3_3:6457017-6457036 Msa0439970:intron 35.0%
TTTCTTCTGACCTATCCTAT+GGG + chr3_3:6457108-6457127 None:intergenic 35.0%
TATGGTACAGTATACGATTG+AGG - chr3_3:6457229-6457248 Msa0439970:intron 35.0%
TTTCTACATGGTGTACTGTA+TGG - chr3_3:6457366-6457385 Msa0439970:CDS 35.0%
! TGAAATGGTTTTCAGTTCCA+AGG - chr3_3:6457469-6457488 Msa0439970:CDS 35.0%
GGATAGTACAATTACTGATG+AGG - chr3_3:6457490-6457509 Msa0439970:CDS 35.0%
AATTATTGCCAAAGGAGAAG+AGG - chr3_3:6457523-6457542 Msa0439970:intron 35.0%
CAGCTACAAAAAGAAAGTAG+AGG + chr3_3:6457723-6457742 None:intergenic 35.0%
!!! GACATGATATGCGGATTTTT+TGG - chr3_3:6458019-6458038 Msa0439970:CDS 35.0%
!!! CATGATATGCGGATTTTTTG+GGG - chr3_3:6458021-6458040 Msa0439970:CDS 35.0%
!!! TTTTGGGGTCTATAGTTACT+CGG - chr3_3:6458036-6458055 Msa0439970:CDS 35.0%
AATACTTCAAGCAAACCATG+CGG - chr3_3:6458065-6458084 Msa0439970:intron 35.0%
AGTGCATAAACTTACAACTG+TGG + chr3_3:6458136-6458155 None:intergenic 35.0%
GACAGAAGCTTTACGTTAAA+AGG + chr3_3:6458168-6458187 None:intergenic 35.0%
AAAAACTGGAAATCATGCCT+GGG + chr3_3:6458216-6458235 None:intergenic 35.0%
TCATACAACTCACTCAATCT+CGG + chr3_3:6458246-6458265 None:intergenic 35.0%
CTTTACCTGATTCTTCTGAT+GGG + chr3_3:6458387-6458406 None:intergenic 35.0%
! ATAGATGTTGATGAACCAGA+AGG - chr3_3:6458413-6458432 Msa0439970:intron 35.0%
TGTATTGAATGTTCAGAGGT+AGG - chr3_3:6458504-6458523 Msa0439970:CDS 35.0%
! AGTCTAGTTTGCAAAAAGGA+GGG + chr3_3:6458592-6458611 None:intergenic 35.0%
! AAGTCTAGTTTGCAAAAAGG+AGG + chr3_3:6458593-6458612 None:intergenic 35.0%
! CAATGTAGGGATTTTCATCA+TGG - chr3_3:6458648-6458667 Msa0439970:intron 35.0%
!! AAGATTTTAACACCTTCCTC+AGG - chr3_3:6458678-6458697 Msa0439970:intron 35.0%
!! AGATTTTAACACCTTCCTCA+GGG - chr3_3:6458679-6458698 Msa0439970:intron 35.0%
ATTTCGACCATATTTCTCAC+AGG + chr3_3:6458705-6458724 None:intergenic 35.0%
GGAAGTTGAAAGATATGCAA+AGG - chr3_3:6458769-6458788 Msa0439970:intron 35.0%
GGTCTTCAAAGAAAGATACA+AGG - chr3_3:6458790-6458809 Msa0439970:intron 35.0%
TTTCACAGTCACACTCAAAT+TGG + chr3_3:6458836-6458855 None:intergenic 35.0%
AGTTTCTCACTAGAATGTCA+AGG - chr3_3:6459017-6459036 Msa0439970:intron 35.0%
TTATCAAAAACATCGAGAGG+GGG - chr3_3:6459090-6459109 Msa0439970:intron 35.0%
GATGAGATCATGAAAGCTAT+CGG - chr3_3:6459134-6459153 Msa0439970:intron 35.0%
GAAAGCTATCGGAAAGAAAT+TGG - chr3_3:6459145-6459164 Msa0439970:intron 35.0%
! TAGAGTTGAAGGTACAGTAT+GGG - chr3_3:6459189-6459208 Msa0439970:intron 35.0%
TACAGTATGGGCAAAACAAA+GGG - chr3_3:6459201-6459220 Msa0439970:intron 35.0%
ATATGCATGGTTCACAAACT+TGG - chr3_3:6459342-6459361 Msa0439970:intron 35.0%
! CACCCTTGTTTAGATTTGAT+TGG - chr3_3:6459406-6459425 Msa0439970:intron 35.0%
AAAACCAAGAATACGATGAG+AGG - chr3_3:6459499-6459518 Msa0439970:intron 35.0%
AAACCAAGAATACGATGAGA+GGG - chr3_3:6459500-6459519 Msa0439970:intron 35.0%
ATATTAGCAACCAGTTGTTG+TGG + chr3_3:6459579-6459598 None:intergenic 35.0%
CAGCTTATGCTATTGTTGTA+GGG - chr3_3:6459822-6459841 Msa0439970:intron 35.0%
AGCTTATGCTATTGTTGTAG+GGG - chr3_3:6459823-6459842 Msa0439970:intron 35.0%
ACGTATGACCTAAATTGCAA+AGG - chr3_3:6459863-6459882 Msa0439970:intron 35.0%
CGTATGACCTAAATTGCAAA+GGG - chr3_3:6459864-6459883 Msa0439970:intron 35.0%
GTATGACCTAAATTGCAAAG+GGG - chr3_3:6459865-6459884 Msa0439970:intron 35.0%
GGTCATCAATCTTTATGTCT+AGG + chr3_3:6459928-6459947 None:intergenic 35.0%
!! CTATTCTGACTTGCTTACTA+CGG + chr3_3:6460352-6460371 None:intergenic 35.0%
! ATAACTTGTGGTCGAGATTA+TGG + chr3_3:6460397-6460416 None:intergenic 35.0%
ACACCAATAATACGACCTTT+GGG + chr3_3:6460633-6460652 None:intergenic 35.0%
TGAGCGGTGAAGAATGAAAA+AGG + chr3_3:6451801-6451820 None:intergenic 40.0%
CCCTTGAATTCAAGAATCCA+TGG - chr3_3:6451830-6451849 Msa0439970:intron 40.0%
GCCATGGATTCTTGAATTCA+AGG + chr3_3:6451834-6451853 None:intergenic 40.0%
CAACGAAGAAGAAGATCAAG+AGG - chr3_3:6451938-6451957 Msa0439970:intron 40.0%
AGAAGAAGATCAAGAGGAGT+TGG - chr3_3:6451944-6451963 Msa0439970:intron 40.0%
! GATGATGATGAAGATGTCGT+TGG - chr3_3:6451993-6452012 Msa0439970:intron 40.0%
! GTGAAGATGGTGATGATGAT+GGG - chr3_3:6452051-6452070 Msa0439970:intron 40.0%
! TGAAGATGGTGATGATGATG+GGG - chr3_3:6452052-6452071 Msa0439970:intron 40.0%
ATGTGTTTGTGAGAGAGAGA+GGG - chr3_3:6452316-6452335 Msa0439970:intron 40.0%
!!! AGGGATTTTTTTGTGTGGAC+CGG - chr3_3:6452341-6452360 Msa0439970:intron 40.0%
GTGAGAGTGATAAGAGAGTA+TGG - chr3_3:6452413-6452432 Msa0439970:intron 40.0%
! AGAGAGTATGGTAAACAGCA+TGG - chr3_3:6452425-6452444 Msa0439970:intron 40.0%
TTGGTCACCTTTCGCAAAAT+GGG + chr3_3:6452758-6452777 None:intergenic 40.0%
ATTGGTCACCTTTCGCAAAA+TGG + chr3_3:6452759-6452778 None:intergenic 40.0%
CAAAATATTGACAACGGGCA+TGG + chr3_3:6453239-6453258 None:intergenic 40.0%
TTTCGTGTGTATGCAGAATC+GGG - chr3_3:6453356-6453375 Msa0439970:CDS 40.0%
TCCTTCCGATTTCAGTAAAC+AGG - chr3_3:6453437-6453456 Msa0439970:intron 40.0%
ACCTGTTTACTGAAATCGGA+AGG + chr3_3:6453441-6453460 None:intergenic 40.0%
CCTGACCTGTTTACTGAAAT+CGG + chr3_3:6453445-6453464 None:intergenic 40.0%
ATGGGTCCCAATAGATAAAG+TGG + chr3_3:6453537-6453556 None:intergenic 40.0%
CAGTAAGTGAAACGACACAA+TGG + chr3_3:6453556-6453575 None:intergenic 40.0%
CAGATTCACCCATGAAACAA+AGG + chr3_3:6453591-6453610 None:intergenic 40.0%
! AATTTCATAAGAGCGCAGGA+AGG + chr3_3:6453668-6453687 None:intergenic 40.0%
AGAATCTTATGGTCCGTGTT+AGG - chr3_3:6453838-6453857 Msa0439970:CDS 40.0%
GTCAAAAGTGACTGAAGAAG+AGG - chr3_3:6453998-6454017 Msa0439970:intron 40.0%
!! GAAGATGAAGAGTACCTGAA+AGG - chr3_3:6454020-6454039 Msa0439970:intron 40.0%
TACCTGAAAGGAGAAGAAGA+CGG - chr3_3:6454032-6454051 Msa0439970:intron 40.0%
TGCTTATGTTCCTGTTTGCA+TGG - chr3_3:6454108-6454127 Msa0439970:CDS 40.0%
TCGCACTCGTCTTTATCTAT+TGG - chr3_3:6454210-6454229 Msa0439970:intron 40.0%
! TTTCTGGTGGTAGACTTCAA+TGG - chr3_3:6454339-6454358 Msa0439970:intron 40.0%
TAAACAAGAAAGCAGTCCAG+AGG + chr3_3:6454422-6454441 None:intergenic 40.0%
AGGTATTCAAGGGAAGATGA+GGG - chr3_3:6454465-6454484 Msa0439970:intron 40.0%
GAAGATGAGGGATTACCAAT+TGG - chr3_3:6454477-6454496 Msa0439970:intron 40.0%
AGGAATTAAAGGCCCTCATA+TGG - chr3_3:6454789-6454808 Msa0439970:intron 40.0%
AATTAAAGGCCCTCATATGG+TGG - chr3_3:6454792-6454811 Msa0439970:intron 40.0%
!!! AAGGGTATGACCTGCTTTTT+CGG - chr3_3:6454909-6454928 Msa0439970:CDS 40.0%
AGAGAGGACTTATTAGTTGC+TGG - chr3_3:6455018-6455037 Msa0439970:CDS 40.0%
!!! CCTCATTGTTTTAGAGAGCA+AGG + chr3_3:6455163-6455182 None:intergenic 40.0%
!! CCTTGCTCTCTAAAACAATG+AGG - chr3_3:6455160-6455179 Msa0439970:intron 40.0%
! GGAGAAACTGTTAGAAGTGT+TGG - chr3_3:6455400-6455419 Msa0439970:CDS 40.0%
!! GAAACTGTTAGAAGTGTTGG+AGG - chr3_3:6455403-6455422 Msa0439970:CDS 40.0%
! GATTTGAAACCACTCATCGA+AGG + chr3_3:6456052-6456071 None:intergenic 40.0%
GATGAGTGGTTTCAAATCTC+TGG - chr3_3:6456054-6456073 Msa0439970:CDS 40.0%
CTTTGTATATCAAGGTCCTC+CGG - chr3_3:6456187-6456206 Msa0439970:CDS 40.0%
! TGACATGCCCACTTTAAGAA+TGG + chr3_3:6456274-6456293 None:intergenic 40.0%
ATTACTGCAGAAGGATCTTG+AGG - chr3_3:6456320-6456339 Msa0439970:intron 40.0%
GTTGCATAGCTATATTCAGG+AGG + chr3_3:6456374-6456393 None:intergenic 40.0%
GCAGTTGCATAGCTATATTC+AGG + chr3_3:6456377-6456396 None:intergenic 40.0%
TCAGCACCTTGGAAAAGATA+TGG + chr3_3:6456417-6456436 None:intergenic 40.0%
TGATCTCCTGTTGTATAAGG+AGG + chr3_3:6456447-6456466 None:intergenic 40.0%
CACTTGAAGAGATACTTCAG+AGG - chr3_3:6456496-6456515 Msa0439970:CDS 40.0%
! TTTTCACAGGTGTGTTCTGT+TGG - chr3_3:6456640-6456659 Msa0439970:intron 40.0%
!! CGGTTTGTTGAAAGCATCAA+TGG + chr3_3:6456858-6456877 None:intergenic 40.0%
! TTCTTGTTATCAACTCGAGC+TGG - chr3_3:6456896-6456915 Msa0439970:intron 40.0%
GTCAGTATTTCAAACGGTTG+TGG - chr3_3:6456976-6456995 Msa0439970:intron 40.0%
!! ACGGCTTGTTAAATGGTTTG+TGG - chr3_3:6457036-6457055 Msa0439970:intron 40.0%
! ATGGTTTGTGGTTTCACAAC+AGG - chr3_3:6457048-6457067 Msa0439970:intron 40.0%
CTTTCTTCTGACCTATCCTA+TGG + chr3_3:6457109-6457128 None:intergenic 40.0%
! ATGCTTTGGTGATTCAACAG+GGG - chr3_3:6457291-6457310 Msa0439970:intron 40.0%
! GGTTAGATTTGGAGCTGAAA+TGG - chr3_3:6457454-6457473 Msa0439970:CDS 40.0%
GTTTAATAGATAAGGGGGCA+GGG + chr3_3:6457839-6457858 None:intergenic 40.0%
AGTTTAATAGATAAGGGGGC+AGG + chr3_3:6457840-6457859 None:intergenic 40.0%
!!! AGTTTTTTTGTTCTTCCCCC+AGG - chr3_3:6458196-6458215 Msa0439970:intron 40.0%
AAAACTGGAAATCATGCCTG+GGG + chr3_3:6458215-6458234 None:intergenic 40.0%
GAAAAACTGGAAATCATGCC+TGG + chr3_3:6458217-6458236 None:intergenic 40.0%
! ATCTCGGTGTGTTGAAAAAC+TGG + chr3_3:6458230-6458249 None:intergenic 40.0%
! AAAGGAAGTACGCTATCTCA+TGG - chr3_3:6458266-6458285 Msa0439970:intron 40.0%
CCTTTACCTGATTCTTCTGA+TGG + chr3_3:6458388-6458407 None:intergenic 40.0%
CCATCAGAAGAATCAGGTAA+AGG - chr3_3:6458385-6458404 Msa0439970:intron 40.0%
GTCAAATAGTGTGTACCTTC+TGG + chr3_3:6458431-6458450 None:intergenic 40.0%
! CTTTTCTTCCATCTCTTCAG+CGG + chr3_3:6458541-6458560 None:intergenic 40.0%
AATTCTTCACCTCTTCTAGC+AGG + chr3_3:6458569-6458588 None:intergenic 40.0%
!! ACAAAGTATTGCCTCTGAGA+TGG - chr3_3:6458730-6458749 Msa0439970:intron 40.0%
! AGTTTTTCCTTCCATCTCAG+AGG + chr3_3:6458744-6458763 None:intergenic 40.0%
TGAGATGGAAGGAAAAACTG+AGG - chr3_3:6458745-6458764 Msa0439970:intron 40.0%
ATAAAAACCACGCAAGCTGT+TGG + chr3_3:6458976-6458995 None:intergenic 40.0%
TATCAAAAACATCGAGAGGG+GGG - chr3_3:6459091-6459110 Msa0439970:intron 40.0%
! CTAGAGTTGAAGGTACAGTA+TGG - chr3_3:6459188-6459207 Msa0439970:intron 40.0%
GTACAGTATGGGCAAAACAA+AGG - chr3_3:6459200-6459219 Msa0439970:intron 40.0%
! TGAAGAATGTGACCGATTCA+TGG - chr3_3:6459235-6459254 Msa0439970:intron 40.0%
! TTATTTCTTCATGCCCACCA+CGG - chr3_3:6459270-6459289 Msa0439970:intron 40.0%
ATGGTTCACAAACTTGGCTA+TGG - chr3_3:6459348-6459367 Msa0439970:intron 40.0%
TGGTTCACAAACTTGGCTAT+GGG - chr3_3:6459349-6459368 Msa0439970:intron 40.0%
! CTTTTCTACCAACCGAATGA+GGG + chr3_3:6459478-6459497 None:intergenic 40.0%
CAAAGAGAAGAAACTTGCCA+AGG - chr3_3:6459536-6459555 Msa0439970:intron 40.0%
CTCTGTTTATCCACAACAAC+TGG - chr3_3:6459566-6459585 Msa0439970:intron 40.0%
CACAGATGATTATGCTAGCA+CGG - chr3_3:6459724-6459743 Msa0439970:CDS 40.0%
GCAGCTTATGCTATTGTTGT+AGG - chr3_3:6459821-6459840 Msa0439970:intron 40.0%
TAGGGGAAGAGGAGAAAATA+AGG - chr3_3:6459840-6459859 Msa0439970:intron 40.0%
TAAATTGCAAAGGGGAGGTT+GGG - chr3_3:6459873-6459892 Msa0439970:intron 40.0%
!!! AGGTTGGGTTTTAAAAGCCT+TGG - chr3_3:6459888-6459907 Msa0439970:intron 40.0%
CACAATTAATAGTGGCTCCT+AGG + chr3_3:6459969-6459988 None:intergenic 40.0%
GGAGCCACTATTAATTGTGT+TGG - chr3_3:6459970-6459989 Msa0439970:CDS 40.0%
GTTGGCAGTCGAAATTGTAA+GGG - chr3_3:6460155-6460174 Msa0439970:intron 40.0%
TTGGCAGTCGAAATTGTAAG+GGG - chr3_3:6460156-6460175 Msa0439970:intron 40.0%
!! GTCAAGGTTTTGACGTCATA+TGG - chr3_3:6460187-6460206 Msa0439970:intron 40.0%
! GGTAAATGACATGGTCTTAC+CGG + chr3_3:6460284-6460303 None:intergenic 40.0%
CAAGTCAGAATAGATTTCCC+AGG - chr3_3:6460359-6460378 Msa0439970:intron 40.0%
TATGGTTGTGTTAGGATCCT+GGG + chr3_3:6460379-6460398 None:intergenic 40.0%
TTATGGTTGTGTTAGGATCC+TGG + chr3_3:6460380-6460399 None:intergenic 40.0%
GTCGAGATTATGGTTGTGTT+AGG + chr3_3:6460387-6460406 None:intergenic 40.0%
GACACCAATAATACGACCTT+TGG + chr3_3:6460634-6460653 None:intergenic 40.0%
!! CTTGGTCTTCCATTTTTACC+AGG - chr3_3:6460687-6460706 Msa0439970:five_prime_UTR 40.0%
TGGTCAAAGCCTGGTAAAAA+TGG + chr3_3:6460699-6460718 None:intergenic 40.0%
!! TATGCTTTTTGGTCAAAGCC+TGG + chr3_3:6460708-6460727 None:intergenic 40.0%
TCAAGGGTTTGTGTTGTGAG+CGG + chr3_3:6451817-6451836 None:intergenic 45.0%
AGAGTTCACCTGTTCTTCGT+CGG + chr3_3:6451883-6451902 None:intergenic 45.0%
AGAACAGGTGAACTCTTCGT+CGG - chr3_3:6451887-6451906 Msa0439970:intron 45.0%
TGTCGTTGGAGATAATCCTC+CGG - chr3_3:6452007-6452026 Msa0439970:intron 45.0%
GCAACATCTGCATCAGAATC+CGG + chr3_3:6452029-6452048 None:intergenic 45.0%
GATTCTGATGCAGATGTTGC+TGG - chr3_3:6452029-6452048 Msa0439970:intron 45.0%
! GGTGAAGATGGTGATGATGA+TGG - chr3_3:6452050-6452069 Msa0439970:intron 45.0%
! TGAAGTGAGAGTGAGAGTGT+GGG - chr3_3:6452260-6452279 Msa0439970:intron 45.0%
GATGTGTTTGTGAGAGAGAG+AGG - chr3_3:6452315-6452334 Msa0439970:intron 45.0%
!!! GGGAGAGGGATTTTTTTGTG+TGG - chr3_3:6452336-6452355 Msa0439970:intron 45.0%
!!! GGGATTTTTTTGTGTGGACC+GGG - chr3_3:6452342-6452361 Msa0439970:intron 45.0%
TCACTTCAGTGTGTCCTACT+CGG + chr3_3:6452393-6452412 None:intergenic 45.0%
ACTCACCATGTCAGCTTCAA+TGG + chr3_3:6452592-6452611 None:intergenic 45.0%
AGAATAACAGAGGAAAGGGG+CGG - chr3_3:6452698-6452717 Msa0439970:intron 45.0%
! CTGTTTGCCCATTTTGCGAA+AGG - chr3_3:6452748-6452767 Msa0439970:intron 45.0%
GTCTACAATTTCATGGGTGC+TGG - chr3_3:6453329-6453348 Msa0439970:CDS 45.0%
TGTGTATGCAGAATCGGGAT+TGG - chr3_3:6453361-6453380 Msa0439970:CDS 45.0%
GTGTATGCAGAATCGGGATT+GGG - chr3_3:6453362-6453381 Msa0439970:CDS 45.0%
CCGATTTCAGTAAACAGGTC+AGG - chr3_3:6453442-6453461 Msa0439970:intron 45.0%
CTTCCAAAAACAAACGGGTC+AGG + chr3_3:6453469-6453488 None:intergenic 45.0%
TTTCTGGGTGAATTCTGACC+TGG - chr3_3:6453491-6453510 Msa0439970:intron 45.0%
!!! ACAGGTTTTATTGCCAGACC+AGG + chr3_3:6453512-6453531 None:intergenic 45.0%
TACCTTGGTTGTGACTGATC+CGG - chr3_3:6453906-6453925 Msa0439970:intron 45.0%
!!! CTTCAGTCACTTTTGACGCA+TGG + chr3_3:6453995-6454014 None:intergenic 45.0%
GTGGTGTAAACCATGCAAAC+AGG + chr3_3:6454121-6454140 None:intergenic 45.0%
CAGGTATTCAAGGGAAGATG+AGG - chr3_3:6454464-6454483 Msa0439970:intron 45.0%
ATGAGGGATTACCAATTGGC+TGG - chr3_3:6454481-6454500 Msa0439970:intron 45.0%
! AAATGTGATTTGCAGGGGCT+TGG - chr3_3:6454718-6454737 Msa0439970:intron 45.0%
GTTGCCCCAAAATCAACTCT+TGG - chr3_3:6454814-6454833 Msa0439970:intron 45.0%
CTGCGTGCTGTAAAATTCCT+TGG - chr3_3:6454874-6454893 Msa0439970:intron 45.0%
CAGGTCATACCCTTTCTTCA+GGG + chr3_3:6454903-6454922 None:intergenic 45.0%
!!! AGGGTATGACCTGCTTTTTC+GGG - chr3_3:6454910-6454929 Msa0439970:CDS 45.0%
AACTATCGCCTCCTTATCAC+TGG - chr3_3:6455195-6455214 Msa0439970:CDS 45.0%
! TTTGCATTGAGTTGCTGCTG+AGG - chr3_3:6455694-6455713 Msa0439970:CDS 45.0%
CTCTGGTGAAAATGACCAAC+AGG - chr3_3:6456071-6456090 Msa0439970:CDS 45.0%
TGGTGAAAATGACCAACAGG+AGG - chr3_3:6456074-6456093 Msa0439970:CDS 45.0%
GGTTGTGCAGCAATTACACA+AGG - chr3_3:6456095-6456114 Msa0439970:intron 45.0%
CGGAGGACCTTGATATACAA+AGG + chr3_3:6456189-6456208 None:intergenic 45.0%
ACCTTCGAAGAAGAAATGGC+CGG + chr3_3:6456209-6456228 None:intergenic 45.0%
GATCTTGAGGTTGTCAATGC+TGG - chr3_3:6456333-6456352 Msa0439970:intron 45.0%
TTGTCAATGCTGGTGGAGAA+CGG - chr3_3:6456343-6456362 Msa0439970:intron 45.0%
GATCATCTCATTACCAGTGC+TGG - chr3_3:6456462-6456481 Msa0439970:CDS 45.0%
TGTCGCATAGATGGCAATAC+TGG - chr3_3:6456812-6456831 Msa0439970:intron 45.0%
GCATAGATGGCAATACTGGT+GGG - chr3_3:6456816-6456835 Msa0439970:intron 45.0%
CATAGATGGCAATACTGGTG+GGG - chr3_3:6456817-6456836 Msa0439970:intron 45.0%
TTGTTATCAACTCGAGCTGG+AGG - chr3_3:6456899-6456918 Msa0439970:intron 45.0%
TGGCACAGGTACAAATCAGA+TGG + chr3_3:6457008-6457027 None:intergenic 45.0%
AGCCGTAATGATTATGGCAC+AGG + chr3_3:6457022-6457041 None:intergenic 45.0%
!! AGTTTTCCGTTTTTGCACCG+AGG - chr3_3:6457136-6457155 Msa0439970:intron 45.0%
! TGCAAACCTCGGTGCAAAAA+CGG + chr3_3:6457145-6457164 None:intergenic 45.0%
GAGTCAGTATCTCACCACAT+CGG - chr3_3:6457203-6457222 Msa0439970:intron 45.0%
AGTCAGTATCTCACCACATC+GGG - chr3_3:6457204-6457223 Msa0439970:intron 45.0%
ATTGGCTGAGCAGAAGAGTA+AGG - chr3_3:6457316-6457335 Msa0439970:CDS 45.0%
! CAGAAGAGTAAGGACTTGCT+GGG - chr3_3:6457326-6457345 Msa0439970:CDS 45.0%
! ACTGGGTTGAACCAACAAGA+AGG - chr3_3:6457929-6457948 Msa0439970:intron 45.0%
! CTGGGTTGAACCAACAAGAA+GGG - chr3_3:6457930-6457949 Msa0439970:intron 45.0%
TTGAACCAACAAGAAGGGAG+CGG - chr3_3:6457935-6457954 Msa0439970:intron 45.0%
AGGTGGTCCTTCTAAACCAA+AGG - chr3_3:6458090-6458109 Msa0439970:intron 45.0%
ACTTACAACTGTGGCATCCT+AGG + chr3_3:6458127-6458146 None:intergenic 45.0%
AAACTGGAAATCATGCCTGG+GGG + chr3_3:6458214-6458233 None:intergenic 45.0%
GAAGTACGCTATCTCATGGT+AGG - chr3_3:6458270-6458289 Msa0439970:intron 45.0%
GCAAACCCATCAGAAGAATC+AGG - chr3_3:6458379-6458398 Msa0439970:intron 45.0%
TCAATTGACCGCTGAAGAGA+TGG - chr3_3:6458530-6458549 Msa0439970:intron 45.0%
CGCTGAAGAGATGGAAGAAA+AGG - chr3_3:6458539-6458558 Msa0439970:intron 45.0%
!! AGTATTGCCTCTGAGATGGA+AGG - chr3_3:6458734-6458753 Msa0439970:intron 45.0%
GATGGAAGGAAAAACTGAGG+AGG - chr3_3:6458748-6458767 Msa0439970:intron 45.0%
CATATATCCAACAGCTTGCG+TGG - chr3_3:6458966-6458985 Msa0439970:intron 45.0%
CTAGCCAAGGATTCTTGTAG+CGG + chr3_3:6459172-6459191 None:intergenic 45.0%
GAATCCTTGGCTAGAGTTGA+AGG - chr3_3:6459178-6459197 Msa0439970:intron 45.0%
TGTACCTTCAACTCTAGCCA+AGG + chr3_3:6459185-6459204 None:intergenic 45.0%
! GAATGTGACCGATTCATGGT+AGG - chr3_3:6459239-6459258 Msa0439970:intron 45.0%
ACAAACTTGGCTATGGGAAC+TGG - chr3_3:6459355-6459374 Msa0439970:intron 45.0%
CAAACTTGGCTATGGGAACT+GGG - chr3_3:6459356-6459375 Msa0439970:intron 45.0%
GCACAACACAAGAACTTGCA+AGG - chr3_3:6459442-6459461 Msa0439970:intron 45.0%
CAACACAAGAACTTGCAAGG+AGG - chr3_3:6459445-6459464 Msa0439970:intron 45.0%
! CCTTTTCTACCAACCGAATG+AGG + chr3_3:6459479-6459498 None:intergenic 45.0%
!! CCTCATTCGGTTGGTAGAAA+AGG - chr3_3:6459476-6459495 Msa0439970:intron 45.0%
TCTCCCTCTCATCGTATTCT+TGG + chr3_3:6459506-6459525 None:intergenic 45.0%
AGAACATGACTCCGACAAAG+CGG - chr3_3:6459645-6459664 Msa0439970:intron 45.0%
GTCCATCTTCTGCTAAGAAG+CGG - chr3_3:6459690-6459709 Msa0439970:intron 45.0%
TTCCGCTTCTTAGCAGAAGA+TGG + chr3_3:6459695-6459714 None:intergenic 45.0%
CGTGCTAGCATAATCATCTG+TGG + chr3_3:6459726-6459745 None:intergenic 45.0%
TGCTATTGTTGTAGGGGAAG+AGG - chr3_3:6459829-6459848 Msa0439970:intron 45.0%
TGACCTAAATTGCAAAGGGG+AGG - chr3_3:6459868-6459887 Msa0439970:intron 45.0%
CAACCTCCCCTTTGCAATTT+AGG + chr3_3:6459874-6459893 None:intergenic 45.0%
CTAAATTGCAAAGGGGAGGT+TGG - chr3_3:6459872-6459891 Msa0439970:intron 45.0%
AGGACACGTCAAAATTGCCA+AGG + chr3_3:6459908-6459927 None:intergenic 45.0%
AATAGTGGCTCCTAGGACTA+TGG + chr3_3:6459962-6459981 None:intergenic 45.0%
GGTTGGCAGTCGAAATTGTA+AGG - chr3_3:6460154-6460173 Msa0439970:intron 45.0%
TGGCAGTCGAAATTGTAAGG+GGG - chr3_3:6460157-6460176 Msa0439970:intron 45.0%
GACGATAATGATGTGCCCAA+AGG - chr3_3:6460615-6460634 Msa0439970:CDS 45.0%
GTGCCCAAAGGTCGTATTAT+TGG - chr3_3:6460627-6460646 Msa0439970:CDS 45.0%
!! TTTAAAAAAAAAAAATTTAC+TGG + chr3_3:6455607-6455626 None:intergenic 5.0%
TTGCTTGGACAGTTTCGCCA+TGG + chr3_3:6451850-6451869 None:intergenic 50.0%
GTCGGAAGAAGGTTGTTGCT+TGG + chr3_3:6451865-6451884 None:intergenic 50.0%
ACCTTCTTCCGACGAAGAAC+AGG - chr3_3:6451872-6451891 Msa0439970:intron 50.0%
ACCTGTTCTTCGTCGGAAGA+AGG + chr3_3:6451876-6451895 None:intergenic 50.0%
ACATCTGCATCAGAATCCGG+AGG + chr3_3:6452026-6452045 None:intergenic 50.0%
GCAGATGTTGCTGGTGAAGA+TGG - chr3_3:6452038-6452057 Msa0439970:intron 50.0%
!! AGATGGTGATGATGATGGGG+AGG - chr3_3:6452055-6452074 Msa0439970:intron 50.0%
CTGAAGTGAGAGTGAGAGTG+TGG - chr3_3:6452259-6452278 Msa0439970:intron 50.0%
TTTGTGAGAGAGAGAGGGAG+AGG - chr3_3:6452321-6452340 Msa0439970:intron 50.0%
TTGTGAGAGAGAGAGGGAGA+GGG - chr3_3:6452322-6452341 Msa0439970:intron 50.0%
ACTAATCCTTCGAGCCGAGT+AGG - chr3_3:6452376-6452395 Msa0439970:intron 50.0%
GTTATGTGGCTTCAGGGAGA+AGG - chr3_3:6452468-6452487 Msa0439970:intron 50.0%
!! GGTCCTGACCCGTTTGTTTT+TGG - chr3_3:6453463-6453482 Msa0439970:intron 50.0%
CACCGTCTTCTTCTCCTTTC+AGG + chr3_3:6454037-6454056 None:intergenic 50.0%
CGGTGTTTCAAACACTCGTC+TGG - chr3_3:6454052-6454071 Msa0439970:intron 50.0%
ACCAATTGGCTGGACTGAAC+TGG - chr3_3:6454491-6454510 Msa0439970:intron 50.0%
TGGAATTCTGGCCGATGAGA+TGG - chr3_3:6454543-6454562 Msa0439970:intron 50.0%
GGCTACTTGCATGAGTTCAG+AGG - chr3_3:6454769-6454788 Msa0439970:intron 50.0%
TTGGGGCAACCACCATATGA+GGG + chr3_3:6454804-6454823 None:intergenic 50.0%
! TTTGGGGCAACCACCATATG+AGG + chr3_3:6454805-6454824 None:intergenic 50.0%
TCCTTGGCAACCCTGAAGAA+AGG - chr3_3:6454890-6454909 Msa0439970:intron 50.0%
CCTTGGCAACCCTGAAGAAA+GGG - chr3_3:6454891-6454910 Msa0439970:intron 50.0%
GCAGGTCATACCCTTTCTTC+AGG + chr3_3:6454904-6454923 None:intergenic 50.0%
GAAGCGGTGTACCAGTGATA+AGG + chr3_3:6455209-6455228 None:intergenic 50.0%
TATCACTGGTACACCGCTTC+AGG - chr3_3:6455209-6455228 Msa0439970:CDS 50.0%
TGGCTATTCTTCCAGTCTCC+AGG - chr3_3:6455632-6455651 Msa0439970:CDS 50.0%
GGCTATTCTTCCAGTCTCCA+GGG - chr3_3:6455633-6455652 Msa0439970:CDS 50.0%
AGAAAAGGTTCCCTGGAGAC+TGG + chr3_3:6455646-6455665 None:intergenic 50.0%
CTGCTGAAACCTTCGATGAG+TGG - chr3_3:6456040-6456059 Msa0439970:CDS 50.0%
ATTGCTGCACAACCTCCTGT+TGG + chr3_3:6456089-6456108 None:intergenic 50.0%
TTCGAAGAAGAAATGGCCGG+AGG + chr3_3:6456206-6456225 None:intergenic 50.0%
TCCGGCCATTTCTTCTTCGA+AGG - chr3_3:6456205-6456224 Msa0439970:CDS 50.0%
CTTGAGGTTGTCAATGCTGG+TGG - chr3_3:6456336-6456355 Msa0439970:intron 50.0%
!!! CTTTTCCAAGGTGCTGAACC+TGG - chr3_3:6456420-6456439 Msa0439970:CDS 50.0%
CCTGTTGTATAAGGAGGACC+AGG + chr3_3:6456441-6456460 None:intergenic 50.0%
CCTGGTCCTCCTTATACAAC+AGG - chr3_3:6456438-6456457 Msa0439970:CDS 50.0%
TGAGCAGAACTTACCAGCAC+TGG + chr3_3:6456478-6456497 None:intergenic 50.0%
CCTAGTCATCTGGGGGAAAA+AGG + chr3_3:6456744-6456763 None:intergenic 50.0%
! CCTTTTTCCCCCAGATGACT+AGG - chr3_3:6456741-6456760 Msa0439970:intron 50.0%
TCTAGCAGCCTAGTCATCTG+GGG + chr3_3:6456752-6456771 None:intergenic 50.0%
GTCTAGCAGCCTAGTCATCT+GGG + chr3_3:6456753-6456772 None:intergenic 50.0%
TGTCTAGCAGCCTAGTCATC+TGG + chr3_3:6456754-6456773 None:intergenic 50.0%
CGCATAGATGGCAATACTGG+TGG - chr3_3:6456815-6456834 Msa0439970:intron 50.0%
!! GAACCCACAAGTTGACTTGC+AGG - chr3_3:6457070-6457089 Msa0439970:intron 50.0%
GAGCCTGCAAGTCAACTTGT+GGG + chr3_3:6457076-6457095 None:intergenic 50.0%
TGAGCCTGCAAGTCAACTTG+TGG + chr3_3:6457077-6457096 None:intergenic 50.0%
CAAGATCGTGCCCATAGGAT+AGG - chr3_3:6457095-6457114 Msa0439970:intron 50.0%
GTCAGTATCTCACCACATCG+GGG - chr3_3:6457205-6457224 Msa0439970:intron 50.0%
ATCTCACCACATCGGGGTTA+TGG - chr3_3:6457211-6457230 Msa0439970:intron 50.0%
ACTGTACCATAACCCCGATG+TGG + chr3_3:6457220-6457239 None:intergenic 50.0%
GCAGAAGAGTAAGGACTTGC+TGG - chr3_3:6457325-6457344 Msa0439970:CDS 50.0%
TGCAGTTGCCTCTTCTCCTT+TGG + chr3_3:6457534-6457553 None:intergenic 50.0%
TTCAAGCAAACCATGCGGCA+AGG - chr3_3:6458070-6458089 Msa0439970:intron 50.0%
ACTGTGGCATCCTAGGAATG+CGG + chr3_3:6458120-6458139 None:intergenic 50.0%
CATATTTCTCACAGGCCCTG+AGG + chr3_3:6458697-6458716 None:intergenic 50.0%
CTCAGGGCCTGTGAGAAATA+TGG - chr3_3:6458695-6458714 Msa0439970:intron 50.0%
GGAGGCTAGAATTTCTCGGA+AGG - chr3_3:6459112-6459131 Msa0439970:intron 50.0%
TGGACCGCTACAAGAATCCT+TGG - chr3_3:6459165-6459184 Msa0439970:intron 50.0%
ACAAAACCATGGAAGGACCG+TGG + chr3_3:6459290-6459309 None:intergenic 50.0%
! TGGGAACTGGGATGAGTTGA+AGG - chr3_3:6459368-6459387 Msa0439970:intron 50.0%
GAACATGACTCCGACAAAGC+GGG - chr3_3:6459646-6459665 Msa0439970:intron 50.0%
AGGACTATGGAAGGCAAGAC+TGG + chr3_3:6459949-6459968 None:intergenic 50.0%
GTCTTGCCTTCCATAGTCCT+AGG - chr3_3:6459949-6459968 Msa0439970:CDS 50.0%
!! GTAAGGGGGAAAAAGCGTCA+AGG - chr3_3:6460171-6460190 Msa0439970:intron 50.0%
ACAGGTGAACTCTTCGTCGG+AGG - chr3_3:6451890-6451909 Msa0439970:intron 55.0%
TGCGGCCATTGAAGCTGACA+TGG - chr3_3:6452584-6452603 Msa0439970:intron 55.0%
AACATCCAGGCGGAGTTCCT+AGG - chr3_3:6453030-6453049 Msa0439970:CDS 55.0%
AATAGCCTAGGAACTCCGCC+TGG + chr3_3:6453038-6453057 None:intergenic 55.0%
GGGTGAATTCTGACCTGGTC+TGG - chr3_3:6453496-6453515 Msa0439970:intron 55.0%
! AGCGCAGGAAGGCTGAGTTT+TGG + chr3_3:6453657-6453676 None:intergenic 55.0%
TGCCGGATCAGTCACAACCA+AGG + chr3_3:6453911-6453930 None:intergenic 55.0%
GCCAGTTCAGTCCAGCCAAT+TGG + chr3_3:6454495-6454514 None:intergenic 55.0%
CCCTTTCTTCAGGGTTGCCA+AGG + chr3_3:6454894-6454913 None:intergenic 55.0%
GCGGTGTACCAGTGATAAGG+AGG + chr3_3:6455206-6455225 None:intergenic 55.0%
CTGGTACACCGCTTCAGGTA+TGG - chr3_3:6455214-6455233 Msa0439970:CDS 55.0%
CTAGCAGCCTAGTCATCTGG+GGG + chr3_3:6456751-6456770 None:intergenic 55.0%
TCAACTCGAGCTGGAGGTCT+TGG - chr3_3:6456905-6456924 Msa0439970:intron 55.0%
AGGCTCAAGATCGTGCCCAT+AGG - chr3_3:6457090-6457109 Msa0439970:intron 55.0%
GGTGATTCAACAGGGGCGAT+TGG - chr3_3:6457298-6457317 Msa0439970:CDS 55.0%
AAGCAAACCATGCGGCAAGG+TGG - chr3_3:6458073-6458092 Msa0439970:intron 55.0%
! CGGGGCTCCTTTGGTTTAGA+AGG + chr3_3:6458100-6458119 None:intergenic 55.0%
TGTGGCATCCTAGGAATGCG+GGG + chr3_3:6458118-6458137 None:intergenic 55.0%
CTGTGGCATCCTAGGAATGC+GGG + chr3_3:6458119-6458138 None:intergenic 55.0%
!! AAAGGAGCGCCTGCTAGAAG+AGG - chr3_3:6458557-6458576 Msa0439970:intron 55.0%
TTTCTCACAGGCCCTGAGGA+AGG + chr3_3:6458693-6458712 None:intergenic 55.0%
CAAAAACATCGAGAGGGGGG+AGG - chr3_3:6459094-6459113 Msa0439970:intron 55.0%
GGGGGGAGGCTAGAATTTCT+CGG - chr3_3:6459108-6459127 Msa0439970:intron 55.0%
AACCATGGAAGGACCGTGGT+GGG + chr3_3:6459286-6459305 None:intergenic 55.0%
AAACCATGGAAGGACCGTGG+TGG + chr3_3:6459287-6459306 None:intergenic 55.0%
CTTGCCAAAGCCCGCTTTGT+CGG + chr3_3:6459659-6459678 None:intergenic 55.0%
GTGGCTCCTAGGACTATGGA+AGG + chr3_3:6459958-6459977 None:intergenic 55.0%
! GTGTGTCCTACTCGGCTCGA+AGG + chr3_3:6452385-6452404 None:intergenic 60.0%
GAGGACCAGGTTCAGCACCT+TGG + chr3_3:6456428-6456447 None:intergenic 60.0%
CGCTTCCGCTCCCTTCTTGT+TGG + chr3_3:6457943-6457962 None:intergenic 60.0%
! AGGGAGCGGAAGCGCAAGTA+AGG - chr3_3:6457949-6457968 Msa0439970:intron 60.0%
AGAAGGACCACCTTGCCGCA+TGG + chr3_3:6458083-6458102 None:intergenic 60.0%
CTAGGAATGCGGGGCTCCTT+TGG + chr3_3:6458109-6458128 None:intergenic 60.0%
CAAAGGAGCCCCGCATTCCT+AGG - chr3_3:6458107-6458126 Msa0439970:intron 60.0%
! GGAGGTGCGACACCCTCATT+CGG - chr3_3:6459463-6459482 Msa0439970:intron 60.0%
GTGCGACACCCTCATTCGGT+TGG - chr3_3:6459467-6459486 Msa0439970:intron 60.0%
! GACTCCGACAAAGCGGGCTT+TGG - chr3_3:6459652-6459671 Msa0439970:intron 60.0%
AGGGGGCAGGGAGAGTGAGA+AGG + chr3_3:6457827-6457846 None:intergenic 65.0%
TGCCCACCACGGTCCTTCCA+TGG - chr3_3:6459281-6459300 Msa0439970:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 6451791 6460732 6451791 ID=Msa0439970;Name=Msa0439970
chr3_3 mRNA 6451791 6460732 6451791 ID=Msa0439970-mRNA-1;Parent=Msa0439970;Name=Msa0439970-mRNA-1;_AED=0.16;_eAED=0.16;_QI=58|0.92|0.88|0.96|0.96|0.92|26|0|1043
chr3_3 exon 6451791 6451814 6451791 ID=Msa0439970-mRNA-1:exon:1369;Parent=Msa0439970-mRNA-1
chr3_3 exon 6452778 6452876 6452778 ID=Msa0439970-mRNA-1:exon:1368;Parent=Msa0439970-mRNA-1
chr3_3 exon 6452966 6453181 6452966 ID=Msa0439970-mRNA-1:exon:1367;Parent=Msa0439970-mRNA-1
chr3_3 exon 6453267 6453445 6453267 ID=Msa0439970-mRNA-1:exon:1366;Parent=Msa0439970-mRNA-1
chr3_3 exon 6453702 6453867 6453702 ID=Msa0439970-mRNA-1:exon:1365;Parent=Msa0439970-mRNA-1
chr3_3 exon 6453945 6454003 6453945 ID=Msa0439970-mRNA-1:exon:1364;Parent=Msa0439970-mRNA-1
chr3_3 exon 6454089 6454143 6454089 ID=Msa0439970-mRNA-1:exon:1363;Parent=Msa0439970-mRNA-1
chr3_3 exon 6454236 6454305 6454236 ID=Msa0439970-mRNA-1:exon:1362;Parent=Msa0439970-mRNA-1
chr3_3 exon 6454383 6454472 6454383 ID=Msa0439970-mRNA-1:exon:1361;Parent=Msa0439970-mRNA-1
chr3_3 exon 6454558 6454634 6454558 ID=Msa0439970-mRNA-1:exon:1360;Parent=Msa0439970-mRNA-1
chr3_3 exon 6454755 6454783 6454755 ID=Msa0439970-mRNA-1:exon:1359;Parent=Msa0439970-mRNA-1
chr3_3 exon 6454909 6455097 6454909 ID=Msa0439970-mRNA-1:exon:1358;Parent=Msa0439970-mRNA-1
chr3_3 exon 6455191 6455284 6455191 ID=Msa0439970-mRNA-1:exon:1357;Parent=Msa0439970-mRNA-1
chr3_3 exon 6455366 6455453 6455366 ID=Msa0439970-mRNA-1:exon:1356;Parent=Msa0439970-mRNA-1
chr3_3 exon 6455548 6455768 6455548 ID=Msa0439970-mRNA-1:exon:1355;Parent=Msa0439970-mRNA-1
chr3_3 exon 6455875 6455948 6455875 ID=Msa0439970-mRNA-1:exon:1354;Parent=Msa0439970-mRNA-1
chr3_3 exon 6456040 6456093 6456040 ID=Msa0439970-mRNA-1:exon:1353;Parent=Msa0439970-mRNA-1
chr3_3 exon 6456169 6456322 6456169 ID=Msa0439970-mRNA-1:exon:1352;Parent=Msa0439970-mRNA-1
chr3_3 exon 6456407 6456541 6456407 ID=Msa0439970-mRNA-1:exon:1351;Parent=Msa0439970-mRNA-1
chr3_3 exon 6457293 6457514 6457293 ID=Msa0439970-mRNA-1:exon:1350;Parent=Msa0439970-mRNA-1
chr3_3 exon 6457611 6457790 6457611 ID=Msa0439970-mRNA-1:exon:1349;Parent=Msa0439970-mRNA-1
chr3_3 exon 6457959 6458056 6457959 ID=Msa0439970-mRNA-1:exon:1348;Parent=Msa0439970-mRNA-1
chr3_3 exon 6458434 6458537 6458434 ID=Msa0439970-mRNA-1:exon:1347;Parent=Msa0439970-mRNA-1
chr3_3 exon 6459720 6459823 6459720 ID=Msa0439970-mRNA-1:exon:1346;Parent=Msa0439970-mRNA-1
chr3_3 exon 6459918 6460040 6459918 ID=Msa0439970-mRNA-1:exon:1345;Parent=Msa0439970-mRNA-1
chr3_3 exon 6460447 6460732 6460447 ID=Msa0439970-mRNA-1:exon:1344;Parent=Msa0439970-mRNA-1
chr3_3 five_prime_UTR 6460675 6460732 6460675 ID=Msa0439970-mRNA-1:five_prime_utr;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6460447 6460674 6460447 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6459918 6460040 6459918 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6459720 6459823 6459720 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6458434 6458537 6458434 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6457959 6458056 6457959 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6457611 6457790 6457611 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6457293 6457514 6457293 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6456407 6456541 6456407 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6456169 6456322 6456169 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6456040 6456093 6456040 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6455875 6455948 6455875 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6455548 6455768 6455548 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6455366 6455453 6455366 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6455191 6455284 6455191 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6454909 6455097 6454909 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6454755 6454783 6454755 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6454558 6454634 6454558 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6454383 6454472 6454383 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6454236 6454305 6454236 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6454089 6454143 6454089 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6453945 6454003 6453945 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6453702 6453867 6453702 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6453267 6453445 6453267 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6452966 6453181 6452966 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6452778 6452876 6452778 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
chr3_3 CDS 6451791 6451814 6451791 ID=Msa0439970-mRNA-1:cds;Parent=Msa0439970-mRNA-1
Gene Sequence

>Msa0439970

ATGGCGAAACTGTCCAAGCAACAACCTTCTTCCGACGAAGAACAGGTGAACTCTTCGTCGGAGGAAGAAGAGCAAGTTAATGAGCAGATCAACGAAGAAGAAGATCAAGAGGAGTTGGAAGCTGTTGCTCGTGCTGTTAGTTCCGATGATGATGAAGATGTCGTTGGAGATAATCCTCCGGATTCTGATGCAGATGTTGCTGGTGAAGATGGTGATGATGATGGGGAGGGAGAAGGTGCTCCTGAAATAAGCAAACGTGAGAAGGCGAGATTGCGAGAAATGCAAAAAATGAAGAAACAGAAAGTTCAGGAGATATTAGATGCTCAAAATGCGGCCATTGAAGCTGACATGAATAACAGAGGAAAGGGGCGGTTGAAGTATCTCTTACAGCAGACTGAGCTGTTTGCCCATTTTGCGAAAGGTGACCAATCATCTCAAAAGAAGTCAAAAGGAAGTGGTCGCCATGCGTCAAAAGTGACTGAAGAAGAGGAAGATGAAGAGTACCTGAAAGGAGAAGAAGACGGTGTTTCAAACACTCGTCTGGTGACACAGCCATCATGTATTCAAGGGAAGATGAGGGATTACCAATTGGCTGGACTGAACTGGCTCATTCGATTGTATGAAAATGGAATAAATGGAATTCTGGCCGATGAGATGGGGCTTGGTAAAACATTGCAAACTATATCTTTAATGGGCTACTTGCATGAGTTCAGAGGAATTAAAGGCCCTCATATGGTGGTTGCCCCAAAATCAACTCTTGGAAATTGGATGAATGAGATTCGTCGCTTTTGTCCTATTCTGCGTGCTGTAAAATTCCTTGGCAACCCTGAAGAAAGGAGACATATAAGAGAGGACTTATTAGTTGCTGGAAAGTTTGACGTTTGTGTTACAAGTTTTGAAATGGCTATCAAGGAGAAGTCTACTTTACGTCGATTTAGTTGGCGCTACATAATTATCGATGAAGCTCATAGAATCAAGAACGAGAATTCCTTGCTCTCTAAAACAATGAGGATTTACAATACAAACTATCGCCTCCTTATCACTGGTACACCGCTTCAGAATAATCTTCATGAACTTTGGTCTCTTCTCAACTTTCTTCTGCCTGAAATTTTTAGTTCTGCTGAAACCTTCGATGAGTGGTTTCAAATCTCTGGTGAAAATGACCAACAGGAGGTTGTGCAGCAATTACACAAGGTCCTCCGGCCATTTCTTCTTCGAAGGTTGAAGTCAGATGTTGAGAAAGGGTTGCCACCGAAAAAAGAAACCATTCTTAAAGTGGGCATGTCACAATTGCAGAAACAATATTATAAAGCATTACTGCAGAAGGATCTTGAGGTTGTCAATGCTGGTGCTGAACCTGGTCCTCCTTATACAACAGGAGATCATCTCATTACCAGTGCTGGTAAAATGGTTCTTTTGGATAAGTTGCTTCCTAAATTAAAAGAGCGTGATTCTAGGGTCCTTATATTTTCACAGATGACTAGGCTGCTAGACATACTTGAAGATTATTTGATGTTCCGTGGATATCAATATTGTCGCATAGATGGCAATACTGGTGGGGATGATCGTGATGCCTCCATTGATGCTTTCAACAAACCGGGAAGTGAGAAATTTGTCTTCTTGTTATCAACTCGAGCTGGAGGTCTTGGTATTAATCTTGCTACTGCTGACGTCGTCATTCTGTATGATAGTGACTGGAACCCACAAGTTGACTTGCAGGCTCAAGATCGTGCCCATAGGATAGGTCAGAAGAAAGAAGTTCAAGTTTTCCGTTTTTGCACCGAGTATACGATTGAGGAGAAAGTCATTGAAAGAGCTTACAAAAAGCTTGCACTTGATGCTTTGGTGATTCAACAGGGGCGATTGGCTGAGCAGAAGACGGTAAATAAAGATGAGTTACTTCAAATGGTTAGATTTGGAGCTGAAATGGTTTTCAGTTCCAAGGATAGTACAATTACTGATGAGGATATTGATAGAATTATTGCCAAAGGAGAAGAGGCAACTGCAGAGCTTGATGCCAAGATGAAGAAATTTACAGAAGATGCAATCAAATTTAAGATGGATGACACTGCTGAGTTATACGATTTTGATGATAAGGATGAGAACAAGTTTGATTTCAAAAAAATTGTGAGTGAAAACTGGGTTGAACCAACAAGAAGGGAGCGGAAGCGCAATTACTCGGAGTCTGAATACTTCAAGCAAACCATGCGGCAAGGTGGTCCTTCTAAACCAAAGGAGCCCCGCATTCCTAGGATGCCACAGTTGCATGATTTCCAGTTTTTCAACACACCGAGATTGAGTGAGTTGTATGAAAAGGAAGTACGCTATCTCATGCAAACCCATCAGAAGAATCAGGTAAAGGACTCGATAGATGTTGATGAACCAGAAGAGGTAGGAGATCAATTGACCGCTGAAGAGATGGAAGAAAAGGAGCGCCTGCTAGAAGAGGGATTTTCATCATGGAGCCGAAAAGATTTTAACACCTTCCTCAGGGCCTGTGAGAAATATGGTCGAAATGATATACAAAGTATTGCCTCTGAGATGGAAGGAAAAACTGAGGAGGAAGTTGAAAGATATGCAAAGGTCTTCAAAGAAAGATACAAGGAATTAAATGATTATGATAGAATTATCAAAAACATCGAGAGGGGGGAGGCTAGAATTTCTCGGAAGGATGAGATCATGAAAGCTATCGGAAAGAAATTGGACCGCTACAAGAATCCTTGGCTAGAGTTGAAGGTACAGTATGGGCAAAACAAAGGGAAGCTATACAATGAAGAATGTGACCGATTCATGATATGCATGGTTCACAAACTTGGCTATGGGAACTGGGATGAGTTGAAGGCAGCGTTTCGAACATCACCCTTGTTTAGATTTGATTGGTTTGTCAAGTCTCGCACAACACAAGAACTTGCAAGGAGGTGCGACACCCTCATTCGGTTGGTAGAAAAGGAAAACCAAGAATACGATGAGAGGGAGAGACAAGCTCGCAAAGAGAAGAAACTTGCCAAGAACATGACTCCGACAAAGCGGGCTTTGGCAAGACAAACTGAGAGTCCATCTTCTGCTAAGAAGCGGAAGCAGTCAACCACAGATGATTATGCTAGCACGGCTTTGACCAAAAAGCATATTTGA
Protein sequence

>Msa0439970

MAKLSKQQPSSDEEQVNSSSEEEEQVNEQINEEEDQEELEAVARAVSSDDDEDVVGDNPPDSDADVAGEDGDDDGEGEGAPEISKREKARLREMQKMKKQKVQEILDAQNAAIEADMNNRGKGRLKYLLQQTELFAHFAKGDQSSQKKSKGSGRHASKVTEEEEDEEYLKGEEDGVSNTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGIKGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPEERRHIREDLLVAGKFDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQLQKQYYKALLQKDLEVVNAGAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDKDENKFDFKKIVSENWVEPTRRERKRNYSESEYFKQTMRQGGPSKPKEPRIPRMPQLHDFQFFNTPRLSELYEKEVRYLMQTHQKNQVKDSIDVDEPEEVGDQLTAEEMEEKERLLEEGFSSWSRKDFNTFLRACEKYGRNDIQSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKVQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKNMTPTKRALARQTESPSSAKKRKQSTTDDYASTALTKKHI*