Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031510 | sp|Q9ZVQ6|P2B10_ARATH | 43.678 | 174 | 82 | 6 | 21 | 187 | 104 | 268 | 1.83e-40 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0031510 | 0.821129 | 4.757119e-53 | -8.615850e-47 |
| Msa0021090 | Msa0031510 | -0.803031 | 4.232746e-49 | -8.615850e-47 |
| Msa0027260 | Msa0031510 | 0.800784 | 1.225168e-48 | -8.615850e-47 |
| Msa0031510 | Msa0032260 | 0.801639 | 8.187654e-49 | -8.615850e-47 |
| Msa0031510 | Msa0033880 | 0.807121 | 5.898778e-50 | -8.615850e-47 |
| Msa0031510 | Msa0042280 | 0.820982 | 5.143779e-53 | -8.615850e-47 |
| Msa0031510 | Msa0048180 | 0.819414 | 1.176247e-52 | -8.615850e-47 |
| Msa0031510 | Msa0052350 | -0.823522 | 1.323738e-53 | -8.615850e-47 |
| Msa0031510 | Msa0052610 | 0.807424 | 5.089897e-50 | -8.615850e-47 |
| Msa0031510 | Msa0056270 | 0.801492 | 8.778675e-49 | -8.615850e-47 |
| Msa0031510 | Msa0057610 | 0.813949 | 1.975471e-51 | -8.615850e-47 |
| Msa0031510 | Msa0068020 | 0.832502 | 9.113427e-56 | -8.615850e-47 |
| Msa0031510 | Msa0076040 | 0.808567 | 2.906670e-50 | -8.615850e-47 |
| Msa0031510 | Msa0094950 | 0.803640 | 3.165527e-49 | -8.615850e-47 |
| Msa0031510 | Msa0101180 | 0.817930 | 2.553801e-52 | -8.615850e-47 |
| Msa0031510 | Msa0111330 | 0.820772 | 5.747887e-53 | -8.615850e-47 |
| Msa0031510 | Msa0116130 | 0.818482 | 1.915845e-52 | -8.615850e-47 |
| Msa0031510 | Msa0126520 | 0.983189 | 4.555015e-157 | -8.615850e-47 |
| Msa0031510 | Msa0126840 | 0.801827 | 7.493856e-49 | -8.615850e-47 |
| Msa0031510 | Msa0127310 | 0.806372 | 8.495536e-50 | -8.615850e-47 |
| Msa0031510 | Msa0128860 | 0.820269 | 7.500804e-53 | -8.615850e-47 |
| Msa0031510 | Msa0165950 | 0.817866 | 2.641059e-52 | -8.615850e-47 |
| Msa0031510 | Msa0166750 | 0.828721 | 7.679681e-55 | -8.615850e-47 |
| Msa0031510 | Msa0167480 | 0.855487 | 6.103784e-62 | -8.615850e-47 |
| Msa0031510 | Msa0171410 | 0.832888 | 7.308402e-56 | -8.615850e-47 |
| Msa0031510 | Msa0174000 | 0.809161 | 2.169995e-50 | -8.615850e-47 |
| Msa0031510 | Msa0174730 | 0.816322 | 5.871099e-52 | -8.615850e-47 |
| Msa0031510 | Msa0174770 | 0.819578 | 1.079328e-52 | -8.615850e-47 |
| Msa0031510 | Msa0180020 | 0.822558 | 2.221402e-53 | -8.615850e-47 |
| Msa0031510 | Msa0181610 | 0.833740 | 4.483196e-56 | -8.615850e-47 |
| Msa0031510 | Msa0183460 | 0.834544 | 2.819529e-56 | -8.615850e-47 |
| Msa0031510 | Msa0187930 | 0.831768 | 1.384609e-55 | -8.615850e-47 |
| Msa0031510 | Msa0188890 | 0.802789 | 4.748802e-49 | -8.615850e-47 |
| Msa0031510 | Msa0191080 | 0.815329 | 9.776792e-52 | -8.615850e-47 |
| Msa0031510 | Msa0193600 | 0.811319 | 7.429085e-51 | -8.615850e-47 |
| Msa0031510 | Msa0194540 | 0.833934 | 4.009259e-56 | -8.615850e-47 |
| Msa0031510 | Msa0199690 | 0.839822 | 1.259255e-57 | -8.615850e-47 |
| Msa0031510 | Msa0218830 | 0.801540 | 8.582610e-49 | -8.615850e-47 |
| Msa0031510 | Msa0219120 | 0.809964 | 1.458390e-50 | -8.615850e-47 |
| Msa0031510 | Msa0221030 | 0.819702 | 1.010853e-52 | -8.615850e-47 |
| Msa0031510 | Msa0226460 | 0.810479 | 1.129416e-50 | -8.615850e-47 |
| Msa0031510 | Msa0231100 | 0.854752 | 9.986041e-62 | -8.615850e-47 |
| Msa0031510 | Msa0236270 | 0.831934 | 1.259553e-55 | -8.615850e-47 |
| Msa0031510 | Msa0244780 | 0.826665 | 2.394537e-54 | -8.615850e-47 |
| Msa0031510 | Msa0245060 | 0.817846 | 2.668388e-52 | -8.615850e-47 |
| Msa0031510 | Msa0258850 | 0.800118 | 1.674671e-48 | -8.615850e-47 |
| Msa0031510 | Msa0260240 | 0.809488 | 1.845973e-50 | -8.615850e-47 |
| Msa0031510 | Msa0260280 | 0.809574 | 1.769433e-50 | -8.615850e-47 |
| Msa0031510 | Msa0262480 | 0.872021 | 4.377306e-67 | -8.615850e-47 |
| Msa0031510 | Msa0268130 | 0.820440 | 6.852390e-53 | -8.615850e-47 |
| Msa0031510 | Msa0273650 | 0.812536 | 4.035715e-51 | -8.615850e-47 |
| Msa0031510 | Msa0275360 | 0.800008 | 1.762800e-48 | -8.615850e-47 |
| Msa0031510 | Msa0280430 | 0.869426 | 3.125098e-66 | -8.615850e-47 |
| Msa0031510 | Msa0291520 | 0.841200 | 5.489070e-58 | -8.615850e-47 |
| Msa0031510 | Msa0296250 | 0.817227 | 3.677909e-52 | -8.615850e-47 |
| Msa0031510 | Msa0298200 | 0.817756 | 2.795299e-52 | -8.615850e-47 |
| Msa0031510 | Msa0298990 | 0.814617 | 1.406589e-51 | -8.615850e-47 |
| Msa0031510 | Msa0300350 | 0.846119 | 2.652580e-59 | -8.615850e-47 |
| Msa0031510 | Msa0301870 | 0.823620 | 1.255448e-53 | -8.615850e-47 |
| Msa0031510 | Msa0304590 | 0.850986 | 1.190729e-60 | -8.615850e-47 |
| Msa0031510 | Msa0304660 | 0.858278 | 9.192662e-63 | -8.615850e-47 |
| Msa0031510 | Msa0310410 | 0.805496 | 1.298317e-49 | -8.615850e-47 |
| Msa0031510 | Msa0331700 | 0.858373 | 8.616052e-63 | -8.615850e-47 |
| Msa0031510 | Msa0337650 | 0.807258 | 5.518808e-50 | -8.615850e-47 |
| Msa0031510 | Msa0347680 | 0.820485 | 6.691359e-53 | -8.615850e-47 |
| Msa0031510 | Msa0348830 | 0.846336 | 2.315629e-59 | -8.615850e-47 |
| Msa0031510 | Msa0359040 | 0.802701 | 4.952016e-49 | -8.615850e-47 |
| Msa0031510 | Msa0370160 | -0.822652 | 2.112569e-53 | -8.615850e-47 |
| Msa0031510 | Msa0384880 | 0.805650 | 1.204696e-49 | -8.615850e-47 |
| Msa0031510 | Msa0389510 | 0.808608 | 2.849296e-50 | -8.615850e-47 |
| Msa0031510 | Msa0392940 | 0.803407 | 3.537354e-49 | -8.615850e-47 |
| Msa0031510 | Msa0394400 | 0.822006 | 2.984315e-53 | -8.615850e-47 |
| Msa0031510 | Msa0408240 | -0.817892 | 2.604482e-52 | -8.615850e-47 |
| Msa0031510 | Msa0416400 | 0.810347 | 1.206006e-50 | -8.615850e-47 |
| Msa0031510 | Msa0437690 | -0.828500 | 8.687752e-55 | -8.615850e-47 |
| Msa0031510 | Msa0443390 | 0.846364 | 2.275705e-59 | -8.615850e-47 |
| Msa0031510 | Msa0458060 | 0.820389 | 7.040289e-53 | -8.615850e-47 |
| Msa0031510 | Msa0481480 | 0.803979 | 2.691569e-49 | -8.615850e-47 |
| Msa0031510 | Msa0490820 | 0.811956 | 5.401720e-51 | -8.615850e-47 |
| Msa0031510 | Msa0505150 | 0.809467 | 1.865007e-50 | -8.615850e-47 |
| Msa0031510 | Msa0509950 | -0.823133 | 1.632002e-53 | -8.615850e-47 |
| Msa0031510 | Msa0526540 | 0.849250 | 3.647086e-60 | -8.615850e-47 |
| Msa0031510 | Msa0527150 | 0.818840 | 1.588533e-52 | -8.615850e-47 |
| Msa0031510 | Msa0531650 | 0.812511 | 4.087209e-51 | -8.615850e-47 |
| Msa0031510 | Msa0534750 | 0.858024 | 1.094238e-62 | -8.615850e-47 |
| Msa0031510 | Msa0547990 | 0.801590 | 8.380898e-49 | -8.615850e-47 |
| Msa0031510 | Msa0548880 | -0.807266 | 5.496473e-50 | -8.615850e-47 |
| Msa0031510 | Msa0550540 | 0.815362 | 9.610897e-52 | -8.615850e-47 |
| Msa0031510 | Msa0550570 | 0.832370 | 9.826133e-56 | -8.615850e-47 |
| Msa0031510 | Msa0552810 | 0.804450 | 2.147968e-49 | -8.615850e-47 |
| Msa0031510 | Msa0561430 | 0.829312 | 5.522083e-55 | -8.615850e-47 |
| Msa0031510 | Msa0571920 | 0.832602 | 8.610145e-56 | -8.615850e-47 |
| Msa0031510 | Msa0576940 | 0.844226 | 8.617570e-59 | -8.615850e-47 |
| Msa0031510 | Msa0579770 | 0.823284 | 1.504662e-53 | -8.615850e-47 |
| Msa0031510 | Msa0580230 | 0.809429 | 1.900778e-50 | -8.615850e-47 |
| Msa0031510 | Msa0581070 | 0.833225 | 6.025442e-56 | -8.615850e-47 |
| Msa0031510 | Msa0593700 | 0.830832 | 2.351681e-55 | -8.615850e-47 |
| Msa0031510 | Msa0603840 | -0.819641 | 1.044190e-52 | -8.615850e-47 |
| Msa0031510 | Msa0609000 | 0.825974 | 3.497349e-54 | -8.615850e-47 |
| Msa0031510 | Msa0610390 | 0.844235 | 8.573322e-59 | -8.615850e-47 |
| Msa0031510 | Msa0615580 | 0.846254 | 2.437676e-59 | -8.615850e-47 |
| Msa0031510 | Msa0615660 | 0.832638 | 8.432374e-56 | -8.615850e-47 |
| Msa0031510 | Msa0618930 | 0.807541 | 4.806223e-50 | -8.615850e-47 |
| Msa0031510 | Msa0623200 | 0.812579 | 3.949641e-51 | -8.615850e-47 |
| Msa0031510 | Msa0633570 | 0.821146 | 4.715972e-53 | -8.615850e-47 |
| Msa0031510 | Msa0650920 | 0.836230 | 1.056841e-56 | -8.615850e-47 |
| Msa0031510 | Msa0654870 | 0.855295 | 6.944218e-62 | -8.615850e-47 |
| Msa0031510 | Msa0659030 | 0.819936 | 8.936106e-53 | -8.615850e-47 |
| Msa0031510 | Msa0659140 | 0.823668 | 1.223769e-53 | -8.615850e-47 |
| Msa0031510 | Msa0659990 | 0.826353 | 2.841604e-54 | -8.615850e-47 |
| Msa0031510 | Msa0666230 | 0.849306 | 3.519803e-60 | -8.615850e-47 |
| Msa0031510 | Msa0683780 | 0.828224 | 1.012631e-54 | -8.615850e-47 |
| Msa0031510 | Msa0687630 | 0.833796 | 4.341933e-56 | -8.615850e-47 |
| Msa0031510 | Msa0699190 | 0.838760 | 2.374264e-57 | -8.615850e-47 |
| Msa0031510 | Msa0705000 | 0.823729 | 1.184286e-53 | -8.615850e-47 |
| Msa0031510 | Msa0705040 | 0.843039 | 1.790481e-58 | -8.615850e-47 |
| Msa0031510 | Msa0705600 | 0.823213 | 1.563004e-53 | -8.615850e-47 |
| Msa0031510 | Msa0707390 | 0.868450 | 6.473538e-66 | -8.615850e-47 |
| Msa0031510 | Msa0729200 | 0.819289 | 1.255778e-52 | -8.615850e-47 |
| Msa0031510 | Msa0738100 | 0.833214 | 6.065650e-56 | -8.615850e-47 |
| Msa0031510 | Msa0750920 | 0.809328 | 1.997785e-50 | -8.615850e-47 |
| Msa0031510 | Msa0751010 | 0.808211 | 3.462344e-50 | -8.615850e-47 |
| Msa0031510 | Msa0769590 | 0.827484 | 1.524856e-54 | -8.615850e-47 |
| Msa0031510 | Msa0785130 | 0.867273 | 1.545110e-65 | -8.615850e-47 |
| Msa0031510 | Msa0794050 | 0.863890 | 1.801548e-64 | -8.615850e-47 |
| Msa0031510 | Msa0805500 | 0.807957 | 3.920582e-50 | -8.615850e-47 |
| Msa0031510 | Msa0806880 | 0.838609 | 2.597489e-57 | -8.615850e-47 |
| Msa0031510 | Msa0806920 | 0.800063 | 1.717671e-48 | -8.615850e-47 |
| Msa0031510 | Msa0814250 | 0.806030 | 1.002608e-49 | -8.615850e-47 |
| Msa0031510 | Msa0817540 | 0.823930 | 1.062256e-53 | -8.615850e-47 |
| Msa0031510 | Msa0818770 | 0.844867 | 5.792373e-59 | -8.615850e-47 |
| Msa0031510 | Msa0819540 | 0.819474 | 1.139499e-52 | -8.615850e-47 |
| Msa0031510 | Msa0824640 | 0.806218 | 9.151954e-50 | -8.615850e-47 |
| Msa0031510 | Msa0847080 | 0.803717 | 3.050667e-49 | -8.615850e-47 |
| Msa0031510 | Msa0858440 | 0.802411 | 5.682124e-49 | -8.615850e-47 |
| Msa0031510 | Msa0864010 | 0.806303 | 8.783471e-50 | -8.615850e-47 |
| Msa0031510 | Msa0943170 | 0.806363 | 8.529650e-50 | -8.615850e-47 |
| Msa0031510 | Msa0945480 | 0.808711 | 2.708157e-50 | -8.615850e-47 |
| Msa0031510 | Msa0960830 | 0.857326 | 1.761525e-62 | -8.615850e-47 |
| Msa0031510 | Msa0963020 | 0.829555 | 4.822440e-55 | -8.615850e-47 |
| Msa0031510 | Msa0974810 | 0.805039 | 1.617879e-49 | -8.615850e-47 |
| Msa0031510 | Msa0994290 | 0.813698 | 2.243738e-51 | -8.615850e-47 |
| Msa0031510 | Msa1019240 | 0.860907 | 1.488992e-63 | -8.615850e-47 |
| Msa0031510 | Msa1019260 | 0.854931 | 8.861716e-62 | -8.615850e-47 |
| Msa0031510 | Msa1025940 | 0.830322 | 3.135466e-55 | -8.615850e-47 |
| Msa0031510 | Msa1030930 | 0.821423 | 4.070818e-53 | -8.615850e-47 |
| Msa0031510 | Msa1070050 | 0.821047 | 4.968379e-53 | -8.615850e-47 |
| Msa0031510 | Msa1070390 | 0.820526 | 6.547725e-53 | -8.615850e-47 |
| Msa0031510 | Msa1072710 | 0.838772 | 2.358148e-57 | -8.615850e-47 |
| Msa0031510 | Msa1073400 | 0.804129 | 2.505156e-49 | -8.615850e-47 |
| Msa0031510 | Msa1083880 | 0.831761 | 1.390108e-55 | -8.615850e-47 |
| Msa0031510 | Msa1104210 | 0.847963 | 8.289963e-60 | -8.615850e-47 |
| Msa0031510 | Msa1122820 | 0.833448 | 5.302614e-56 | -8.615850e-47 |
| Msa0031510 | Msa1126510 | 0.832775 | 7.795594e-56 | -8.615850e-47 |
| Msa0031510 | Msa1126770 | 0.812219 | 4.733529e-51 | -8.615850e-47 |
| Msa0031510 | Msa1126850 | 0.810862 | 9.334024e-51 | -8.615850e-47 |
| Msa0031510 | Msa1131170 | 0.819678 | 1.023653e-52 | -8.615850e-47 |
| Msa0031510 | Msa1131560 | 0.862000 | 6.907340e-64 | -8.615850e-47 |
| Msa0031510 | Msa1135810 | -0.813697 | 2.244746e-51 | -8.615850e-47 |
| Msa0031510 | Msa1138870 | 0.837936 | 3.873224e-57 | -8.615850e-47 |
| Msa0031510 | Msa1165780 | 0.807071 | 6.045421e-50 | -8.615850e-47 |
| Msa0031510 | Msa1166010 | 0.812056 | 5.136595e-51 | -8.615850e-47 |
| Msa0031510 | Msa1166860 | 0.832704 | 8.122172e-56 | -8.615850e-47 |
| Msa0031510 | Msa1166870 | 0.889165 | 3.091787e-73 | -8.615850e-47 |
| Msa0031510 | Msa1179950 | 0.816287 | 5.975970e-52 | -8.615850e-47 |
| Msa0031510 | Msa1179980 | 0.833906 | 4.074321e-56 | -8.615850e-47 |
| Msa0031510 | Msa1184370 | 0.868919 | 4.564074e-66 | -8.615850e-47 |
| Msa0031510 | Msa1192850 | 0.817932 | 2.551278e-52 | -8.615850e-47 |
| Msa0031510 | Msa1198530 | 0.808886 | 2.484421e-50 | -8.615850e-47 |
| Msa0031510 | Msa1201830 | 0.858040 | 1.081829e-62 | -8.615850e-47 |
| Msa0031510 | Msa1202580 | 0.807066 | 6.061055e-50 | -8.615850e-47 |
| Msa0031510 | Msa1211830 | 0.804565 | 2.032593e-49 | -8.615850e-47 |
| Msa0031510 | Msa1227690 | 0.862324 | 5.495321e-64 | -8.615850e-47 |
| Msa0031510 | Msa1234980 | 0.820278 | 7.464523e-53 | -8.615850e-47 |
| Msa0031510 | Msa1253810 | 0.804265 | 2.346922e-49 | -8.615850e-47 |
| Msa0031510 | Msa1256770 | 0.821779 | 3.367525e-53 | -8.615850e-47 |
| Msa0031510 | Msa1270620 | 0.840233 | 9.838882e-58 | -8.615850e-47 |
| Msa0031510 | Msa1270690 | 0.832929 | 7.140015e-56 | -8.615850e-47 |
| Msa0031510 | Msa1271580 | 0.811795 | 5.854143e-51 | -8.615850e-47 |
| Msa0031510 | Msa1272460 | 0.815934 | 7.167814e-52 | -8.615850e-47 |
| Msa0031510 | Msa1276930 | 0.806846 | 6.746298e-50 | -8.615850e-47 |
| Msa0031510 | Msa1294840 | 0.852626 | 4.080187e-61 | -8.615850e-47 |
| Msa0031510 | Msa1295110 | 0.801815 | 7.536218e-49 | -8.615850e-47 |
| Msa0031510 | Msa1299630 | 0.800768 | 1.234546e-48 | -8.615850e-47 |
| Msa0031510 | Msa1299700 | 0.810730 | 9.968671e-51 | -8.615850e-47 |
| Msa0031510 | Msa1306990 | 0.824399 | 8.245046e-54 | -8.615850e-47 |
| Msa0031510 | Msa1307950 | 0.802506 | 5.433065e-49 | -8.615850e-47 |
| Msa0031510 | Msa1310690 | 0.842525 | 2.452221e-58 | -8.615850e-47 |
| Msa0031510 | Msa1316680 | 0.809223 | 2.104223e-50 | -8.615850e-47 |
| Msa0031510 | Msa1327490 | 0.813208 | 2.875694e-51 | -8.615850e-47 |
| Msa0031510 | Msa1331710 | 0.823268 | 1.517489e-53 | -8.615850e-47 |
| Msa0031510 | Msa1344850 | 0.818016 | 2.441657e-52 | -8.615850e-47 |
| Msa0031510 | Msa1345450 | 0.813842 | 2.085283e-51 | -8.615850e-47 |
| Msa0031510 | Msa1349570 | 0.872961 | 2.126236e-67 | -8.615850e-47 |
| Msa0031510 | Msa1358430 | 0.812521 | 4.066534e-51 | -8.615850e-47 |
| Msa0031510 | Msa1359270 | 0.800545 | 1.370736e-48 | -8.615850e-47 |
| Msa0031510 | Msa1363330 | 0.843648 | 1.231114e-58 | -8.615850e-47 |
| Msa0031510 | Msa1363860 | 0.820271 | 7.489371e-53 | -8.615850e-47 |
| Msa0031510 | Msa1369190 | 0.859185 | 4.926287e-63 | -8.615850e-47 |
| Msa0031510 | Msa1370860 | 0.803693 | 3.085965e-49 | -8.615850e-47 |
| Msa0031510 | Msa1372310 | 0.810669 | 1.027329e-50 | -8.615850e-47 |
| Msa0031510 | Msa1379760 | 0.830326 | 3.128256e-55 | -8.615850e-47 |
| Msa0031510 | Msa1380970 | 0.814662 | 1.374476e-51 | -8.615850e-47 |
| Msa0031510 | Msa1386600 | 0.842617 | 2.318231e-58 | -8.615850e-47 |
| Msa0031510 | Msa1397940 | 0.824133 | 9.518329e-54 | -8.615850e-47 |
| Msa0031510 | Msa1404190 | 0.834204 | 3.431807e-56 | -8.615850e-47 |
| Msa0031510 | Msa1413500 | 0.833209 | 6.083199e-56 | -8.615850e-47 |
| Msa0031510 | Msa1418960 | -0.827532 | 1.485067e-54 | -8.615850e-47 |
| Msa0031510 | Msa1427560 | 0.844243 | 8.530767e-59 | -8.615850e-47 |
| Msa0031510 | Msa1438640 | 0.829051 | 6.388975e-55 | -8.615850e-47 |
| Msa0031510 | Msa1442850 | 0.839251 | 1.771731e-57 | -8.615850e-47 |
| Msa0031510 | Msa1448690 | 0.809092 | 2.244203e-50 | -8.615850e-47 |
| Msa0031510 | Msa1450280 | 0.877198 | 7.616136e-69 | -8.615850e-47 |
| Msa0031510 | Msa1461490 | 0.814276 | 1.673413e-51 | -8.615850e-47 |
| Msa0031510 | Msa1461570 | 0.815067 | 1.117856e-51 | -8.615850e-47 |
| Msa0031510 | Msa1462860 | 0.847106 | 1.426738e-59 | -8.615850e-47 |
| Msa0031510 | Msa1465080 | 0.819396 | 1.187184e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031510 | MtrunA17_Chr1g0189541 | 91.489 | 188 | 12 | 1 | 1 | 188 | 1 | 184 | 3.40e-126 | 352 |
| Msa0031510 | MtrunA17_Chr1g0189611 | 82.081 | 173 | 27 | 3 | 17 | 188 | 96 | 265 | 8.25e-99 | 286 |
| Msa0031510 | MtrunA17_Chr1g0189721 | 69.730 | 185 | 47 | 4 | 11 | 188 | 83 | 265 | 3.68e-85 | 252 |
| Msa0031510 | MtrunA17_Chr1g0189751 | 68.984 | 187 | 45 | 5 | 11 | 188 | 83 | 265 | 1.05e-82 | 246 |
| Msa0031510 | MtrunA17_Chr1g0189621 | 71.751 | 177 | 41 | 4 | 17 | 188 | 92 | 264 | 2.97e-81 | 242 |
| Msa0031510 | MtrunA17_Chr1g0189821 | 67.614 | 176 | 50 | 3 | 16 | 188 | 95 | 266 | 1.35e-77 | 233 |
| Msa0031510 | MtrunA17_Chr1g0203281 | 62.963 | 189 | 62 | 2 | 8 | 188 | 84 | 272 | 1.49e-77 | 233 |
| Msa0031510 | MtrunA17_Chr1g0189671 | 62.431 | 181 | 60 | 4 | 16 | 188 | 92 | 272 | 2.22e-71 | 217 |
| Msa0031510 | MtrunA17_Chr1g0203331 | 63.690 | 168 | 51 | 3 | 17 | 174 | 78 | 245 | 4.22e-67 | 205 |
| Msa0031510 | MtrunA17_Chr1g0189641 | 59.341 | 182 | 65 | 3 | 16 | 188 | 92 | 273 | 3.49e-65 | 201 |
| Msa0031510 | MtrunA17_Chr1g0189651 | 63.006 | 173 | 52 | 4 | 17 | 188 | 18 | 179 | 5.71e-64 | 195 |
| Msa0031510 | MtrunA17_Chr1g0190071 | 57.838 | 185 | 65 | 3 | 17 | 188 | 97 | 281 | 2.24e-63 | 197 |
| Msa0031510 | MtrunA17_Chr1g0157451 | 56.383 | 188 | 66 | 6 | 17 | 188 | 96 | 283 | 6.21e-59 | 186 |
| Msa0031510 | MtrunA17_Chr1g0189661 | 55.729 | 192 | 74 | 5 | 8 | 188 | 87 | 278 | 3.01e-57 | 182 |
| Msa0031510 | MtrunA17_Chr3g0097191 | 57.386 | 176 | 68 | 4 | 16 | 188 | 96 | 267 | 3.20e-56 | 178 |
| Msa0031510 | MtrunA17_Chr7g0260801 | 54.286 | 175 | 70 | 4 | 17 | 188 | 107 | 274 | 1.13e-53 | 172 |
| Msa0031510 | MtrunA17_Chr1g0189781 | 53.631 | 179 | 72 | 5 | 16 | 188 | 100 | 273 | 2.29e-50 | 163 |
| Msa0031510 | MtrunA17_Chr2g0317291 | 54.070 | 172 | 74 | 3 | 17 | 185 | 43 | 212 | 2.37e-49 | 159 |
| Msa0031510 | MtrunA17_Chr1g0188311 | 62.687 | 134 | 35 | 2 | 52 | 170 | 22 | 155 | 3.66e-49 | 156 |
| Msa0031510 | MtrunA17_Chr3g0078331 | 49.048 | 210 | 72 | 5 | 14 | 188 | 106 | 315 | 4.20e-47 | 156 |
| Msa0031510 | MtrunA17_Chr3g0095261 | 48.969 | 194 | 72 | 6 | 16 | 188 | 96 | 283 | 1.33e-44 | 149 |
| Msa0031510 | MtrunA17_Chr7g0272091 | 45.055 | 182 | 86 | 5 | 21 | 188 | 102 | 283 | 4.92e-40 | 137 |
| Msa0031510 | MtrunA17_Chr1g0189711 | 44.724 | 199 | 94 | 8 | 2 | 188 | 81 | 275 | 9.10e-40 | 136 |
| Msa0031510 | MtrunA17_Chr1g0189591 | 43.147 | 197 | 83 | 5 | 21 | 188 | 110 | 306 | 5.41e-39 | 135 |
| Msa0031510 | MtrunA17_Chr1g0189571 | 42.487 | 193 | 86 | 5 | 21 | 188 | 13 | 205 | 1.02e-38 | 132 |
| Msa0031510 | MtrunA17_Chr3g0102081 | 59.048 | 105 | 39 | 1 | 51 | 155 | 23 | 123 | 1.68e-36 | 123 |
| Msa0031510 | MtrunA17_Chr1g0189701 | 43.137 | 204 | 91 | 8 | 5 | 188 | 119 | 317 | 8.73e-34 | 122 |
| Msa0031510 | MtrunA17_Chr1g0192371 | 40.782 | 179 | 94 | 4 | 21 | 188 | 104 | 281 | 1.56e-33 | 120 |
| Msa0031510 | MtrunA17_Chr1g0189631 | 60.417 | 96 | 28 | 1 | 70 | 155 | 2 | 97 | 2.98e-32 | 112 |
| Msa0031510 | MtrunA17_Chr3g0143881 | 49.587 | 121 | 44 | 4 | 70 | 188 | 2 | 107 | 6.21e-28 | 101 |
| Msa0031510 | MtrunA17_Chr7g0272101 | 39.053 | 169 | 89 | 6 | 25 | 188 | 98 | 257 | 8.62e-27 | 102 |
| Msa0031510 | MtrunA17_Chr7g0260811 | 52.688 | 93 | 42 | 1 | 17 | 109 | 72 | 162 | 2.15e-23 | 91.3 |
| Msa0031510 | MtrunA17_Chr4g0043591 | 28.283 | 198 | 111 | 6 | 1 | 188 | 114 | 290 | 7.11e-18 | 79.3 |
| Msa0031510 | MtrunA17_Chr4g0010881 | 35.329 | 167 | 76 | 6 | 26 | 188 | 99 | 237 | 1.20e-17 | 77.8 |
| Msa0031510 | MtrunA17_Chr1g0189771 | 50.704 | 71 | 35 | 0 | 16 | 86 | 104 | 174 | 1.37e-16 | 73.6 |
| Msa0031510 | MtrunA17_Chr1g0189761 | 50.549 | 91 | 39 | 3 | 101 | 188 | 7 | 94 | 1.75e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031510 | AT2G02360.1 | 43.678 | 174 | 82 | 6 | 21 | 187 | 104 | 268 | 1.86e-41 | 141 |
| Msa0031510 | AT1G09155.1 | 41.489 | 188 | 90 | 6 | 21 | 188 | 93 | 280 | 4.32e-36 | 127 |
| Msa0031510 | AT1G80110.1 | 40.341 | 176 | 95 | 6 | 16 | 187 | 86 | 255 | 4.24e-34 | 121 |
| Msa0031510 | AT2G02340.1 | 40.678 | 177 | 92 | 6 | 21 | 187 | 128 | 301 | 7.09e-33 | 119 |
| Msa0031510 | AT2G02240.1 | 37.059 | 170 | 100 | 3 | 21 | 187 | 151 | 316 | 7.47e-33 | 120 |
| Msa0031510 | AT1G56240.1 | 40.642 | 187 | 91 | 7 | 21 | 187 | 94 | 280 | 5.00e-32 | 117 |
| Msa0031510 | AT1G56250.1 | 40.957 | 188 | 91 | 7 | 21 | 188 | 94 | 281 | 1.04e-31 | 116 |
| Msa0031510 | AT2G02250.1 | 37.288 | 177 | 101 | 5 | 16 | 187 | 132 | 303 | 1.17e-31 | 116 |
| Msa0031510 | AT2G02230.1 | 32.075 | 212 | 100 | 6 | 21 | 188 | 122 | 333 | 3.13e-26 | 102 |
| Msa0031510 | AT2G02300.1 | 33.500 | 200 | 99 | 5 | 1 | 188 | 104 | 281 | 6.51e-26 | 100 |
| Msa0031510 | AT2G02350.1 | 35.057 | 174 | 93 | 7 | 25 | 187 | 1 | 165 | 5.54e-23 | 90.9 |
| Msa0031510 | AT2G02350.2 | 34.831 | 178 | 96 | 7 | 21 | 187 | 114 | 282 | 2.02e-22 | 92.0 |
| Msa0031510 | AT2G02310.1 | 32.000 | 175 | 107 | 5 | 21 | 188 | 135 | 304 | 5.39e-22 | 90.9 |
| Msa0031510 | AT2G02320.1 | 35.593 | 177 | 96 | 8 | 21 | 187 | 130 | 298 | 2.67e-19 | 83.6 |
| Msa0031510 | AT1G33920.1 | 28.655 | 171 | 96 | 5 | 25 | 188 | 13 | 164 | 5.81e-17 | 74.7 |
| Msa0031510 | AT2G26820.3 | 28.646 | 192 | 104 | 8 | 10 | 187 | 305 | 477 | 7.99e-15 | 72.0 |
| Msa0031510 | AT2G26820.1 | 27.807 | 187 | 106 | 7 | 11 | 187 | 294 | 461 | 5.77e-14 | 69.7 |
| Msa0031510 | AT4G19840.1 | 27.273 | 176 | 104 | 5 | 18 | 188 | 89 | 245 | 1.11e-12 | 64.7 |
| Msa0031510 | AT3G53000.1 | 26.667 | 180 | 102 | 7 | 25 | 187 | 118 | 284 | 2.41e-11 | 61.6 |
| Msa0031510 | AT2G26820.4 | 36.250 | 80 | 43 | 2 | 10 | 81 | 305 | 384 | 4.82e-11 | 60.8 |
Find 69 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCTGCATATTGAGTATT+TGG | 0.137691 | 1_1:-58254846 | None:intergenic |
| GTTCATGGAATGTTGCTTAA+TGG | 0.277473 | 1_1:-58255190 | None:intergenic |
| TCCACTTCCACTTCCACATT+TGG | 0.287872 | 1_1:-58254975 | None:intergenic |
| TCAAGAAGTTGAGCAACTTC+AGG | 0.327041 | 1_1:-58254774 | None:intergenic |
| AAGCTGCATATTGAGTATTT+GGG | 0.339648 | 1_1:-58254845 | None:intergenic |
| GCTTAATGGTCTTCTTACTT+AGG | 0.362139 | 1_1:-58255176 | None:intergenic |
| TTCTCAAGCATTAGTTAGTC+AGG | 0.370971 | 1_1:+58253270 | Msa0031510:five_prime_UTR |
| GGGTGGTTGGAGATTGAAAT+GGG | 0.384436 | 1_1:+58255053 | Msa0031510:CDS |
| TTGTTGAAGGAATAGAAGTT+AGG | 0.389505 | 1_1:+58255153 | Msa0031510:CDS |
| TAGATCTCTCAGCATTGCTT+GGG | 0.393802 | 1_1:+58253566 | Msa0031510:CDS |
| CCAGGCTGGCATCTTCATCT+TGG | 0.395065 | 1_1:+58253327 | Msa0031510:five_prime_UTR |
| CTAGATCTCTCAGCATTGCT+TGG | 0.399764 | 1_1:+58253565 | Msa0031510:CDS |
| TATGCAAGGGGTCTTGTGTT+TGG | 0.410627 | 1_1:+58255213 | Msa0031510:three_prime_UTR |
| AGGACAGTTCTGAAATCCTT+TGG | 0.419572 | 1_1:-58254892 | None:intergenic |
| ATGATAAGCGCTATTGGAAC+TGG | 0.419916 | 1_1:+58253592 | Msa0031510:CDS |
| TAGTACTAAAATTGTCTGTT+TGG | 0.420764 | 1_1:+58254950 | Msa0031510:CDS |
| AAGACCCCTTGCATAGTTCA+TGG | 0.424562 | 1_1:-58255205 | None:intergenic |
| ATGTTAAGGAGCTACATCTT+TGG | 0.426392 | 1_1:+58255117 | Msa0031510:CDS |
| TAGTCCGTACACGCGTAGTA+CGG | 0.428915 | 1_1:-58253234 | None:intergenic |
| ACACCAACTGATAACTCTAT+AGG | 0.434068 | 1_1:-58254912 | None:intergenic |
| AAGAGTGGTCTCTTTGTTGA+AGG | 0.440904 | 1_1:+58255140 | Msa0031510:CDS |
| CAGGTCAATATTTAAAAGAC+TGG | 0.441866 | 1_1:+58253289 | Msa0031510:five_prime_UTR |
| GGGGTGATGATAAGCGCTAT+TGG | 0.442255 | 1_1:+58253586 | Msa0031510:CDS |
| GAGTATTTGGGGACAAGCTA+AGG | 0.444858 | 1_1:-58254833 | None:intergenic |
| CTCAACTTCTTGAAGTGTGG+TGG | 0.449215 | 1_1:+58254784 | Msa0031510:CDS |
| TTCAATTCAGGCTTAGAAGA+TGG | 0.449517 | 1_1:+58255080 | Msa0031510:CDS |
| ATCTAAGCTAACCTGGAGTC+AGG | 0.456040 | 1_1:-58253624 | None:intergenic |
| CAGGCTGGCATCTTCATCTT+GGG | 0.461205 | 1_1:+58253328 | Msa0031510:five_prime_UTR |
| TGGGTGGTTGGAGATTGAAA+TGG | 0.464905 | 1_1:+58255052 | Msa0031510:CDS |
| CAAGAAGTTGAGCAACTTCA+GGG | 0.466659 | 1_1:-58254773 | None:intergenic |
| CGTCCTAGTGTGAGAAGCGA+TGG | 0.485861 | 1_1:+58255032 | Msa0031510:CDS |
| AGTCCGTACACGCGTAGTAC+GGG | 0.492193 | 1_1:-58253233 | None:intergenic |
| TGGAAGTGGAAGTGGAAGGT+AGG | 0.493027 | 1_1:+58254982 | Msa0031510:CDS |
| GTAGCTCCTTAACATTCATC+AGG | 0.499214 | 1_1:-58255109 | None:intergenic |
| AGACGTCCTGATGAATGTTA+AGG | 0.504428 | 1_1:+58255103 | Msa0031510:CDS |
| AGACAGTTCCGAGCATCAAA+AGG | 0.508442 | 1_1:+58253381 | Msa0031510:CDS |
| TCCAAATGTGGAAGTGGAAG+TGG | 0.508630 | 1_1:+58254974 | Msa0031510:CDS |
| CCAAGATGAAGATGCCAGCC+TGG | 0.514901 | 1_1:-58253327 | None:intergenic |
| TCACCCGTACTACGCGTGTA+CGG | 0.518085 | 1_1:+58253230 | Msa0031510:five_prime_UTR |
| GCAAGGGGTCTTGTGTTTGG+TGG | 0.519713 | 1_1:+58255216 | Msa0031510:three_prime_UTR |
| AACATTCCATGAACTATGCA+AGG | 0.537468 | 1_1:+58255199 | Msa0031510:three_prime_UTR |
| AGGCAGCATGACAGAGCAGT+AGG | 0.538263 | 1_1:+58255002 | Msa0031510:CDS |
| CACCCATCGCTTCTCACACT+AGG | 0.543006 | 1_1:-58255035 | None:intergenic |
| GAGTTATCAGTTGGTGTCGA+AGG | 0.545216 | 1_1:+58254918 | Msa0031510:CDS |
| GTGTGGTGGCTTGATATTAG+TGG | 0.549830 | 1_1:+58254798 | Msa0031510:CDS |
| TCTTCATCTTGGGATACCTA+AGG | 0.562627 | 1_1:+58253338 | Msa0031510:five_prime_UTR |
| TTTGGATCCAAATGTGGAAG+TGG | 0.569537 | 1_1:+58254968 | Msa0031510:CDS |
| GGATTAATATGCCTGACTCC+AGG | 0.571055 | 1_1:+58253613 | Msa0031510:CDS |
| TGTGAGAAGCGATGGGTGGT+TGG | 0.576323 | 1_1:+58255040 | Msa0031510:CDS |
| TCTTATCTATTGTACCAGGC+TGG | 0.581291 | 1_1:+58253313 | Msa0031510:five_prime_UTR |
| AGTATTTGGGGACAAGCTAA+GGG | 0.583185 | 1_1:-58254832 | None:intergenic |
| TTGCTCAACTTCTTGAAGTG+TGG | 0.594620 | 1_1:+58254781 | Msa0031510:CDS |
| AGCTGCATATTGAGTATTTG+GGG | 0.601395 | 1_1:-58254844 | None:intergenic |
| AGATCTCTCAGCATTGCTTG+GGG | 0.605794 | 1_1:+58253567 | Msa0031510:CDS |
| TTATCAGTTGGTGTCGAAGG+TGG | 0.607167 | 1_1:+58254921 | Msa0031510:CDS |
| GAGCTACATCTTTGGAAGAG+TGG | 0.609596 | 1_1:+58255125 | Msa0031510:CDS |
| TTGGGATACCTAAGGATGTG+TGG | 0.610104 | 1_1:+58253346 | Msa0031510:exon |
| ACATTCCATGAACTATGCAA+GGG | 0.611864 | 1_1:+58255200 | Msa0031510:three_prime_UTR |
| TGGATCTTATCTATTGTACC+AGG | 0.612655 | 1_1:+58253309 | Msa0031510:five_prime_UTR |
| GTGGTTGGAGATTGAAATGG+GGG | 0.620504 | 1_1:+58255055 | Msa0031510:CDS |
| TGTCTGTTTGGATCCAAATG+TGG | 0.625217 | 1_1:+58254962 | Msa0031510:CDS |
| TGTCCTATAGAGTTATCAGT+TGG | 0.629309 | 1_1:+58254909 | Msa0031510:CDS |
| GTCCTAGTGTGAGAAGCGAT+GGG | 0.643186 | 1_1:+58255033 | Msa0031510:CDS |
| GGTGGTTGGAGATTGAAATG+GGG | 0.648046 | 1_1:+58255054 | Msa0031510:CDS |
| TGTGGTGGCTTGATATTAGT+GGG | 0.653180 | 1_1:+58254799 | Msa0031510:CDS |
| TTCAAGATGATTGATGCCAA+AGG | 0.654531 | 1_1:+58254876 | Msa0031510:CDS |
| CATTCCATGAACTATGCAAG+GGG | 0.678010 | 1_1:+58255201 | Msa0031510:three_prime_UTR |
| CTAGTGTGAGAAGCGATGGG+TGG | 0.709944 | 1_1:+58255036 | Msa0031510:CDS |
| AATGTGGAAGTGGAAGTGGA+AGG | 0.722814 | 1_1:+58254978 | Msa0031510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAATTTGGTGAAA+TGG | - | chr1_1:58253988-58254007 | None:intergenic | 15.0% |
| !!! | AGTAAATAAAATAATGGAAT+GGG | - | chr1_1:58254178-58254197 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAATTTGGTGAAA+TGG | - | chr1_1:58253988-58254007 | None:intergenic | 15.0% |
| !!! | AGTAAATAAAATAATGGAAT+GGG | - | chr1_1:58254178-58254197 | None:intergenic | 15.0% |
| !! | TTAAGTTAATCAAGACATAT+TGG | - | chr1_1:58253702-58253721 | None:intergenic | 20.0% |
| !! | CAAAAAAATCTTAACTAACT+TGG | - | chr1_1:58253766-58253785 | None:intergenic | 20.0% |
| !! | CAATGAAAAATATATAGGAT+TGG | - | chr1_1:58253963-58253982 | None:intergenic | 20.0% |
| !!! | GAGTAAATAAAATAATGGAA+TGG | - | chr1_1:58254179-58254198 | None:intergenic | 20.0% |
| !! | GTACTGAGTAAATAAAATAA+TGG | - | chr1_1:58254184-58254203 | None:intergenic | 20.0% |
| !! | TTAAGTTAATCAAGACATAT+TGG | - | chr1_1:58253702-58253721 | None:intergenic | 20.0% |
| !! | CAAAAAAATCTTAACTAACT+TGG | - | chr1_1:58253766-58253785 | None:intergenic | 20.0% |
| !! | CAATGAAAAATATATAGGAT+TGG | - | chr1_1:58253963-58253982 | None:intergenic | 20.0% |
| !!! | GAGTAAATAAAATAATGGAA+TGG | - | chr1_1:58254179-58254198 | None:intergenic | 20.0% |
| !! | GTACTGAGTAAATAAAATAA+TGG | - | chr1_1:58254184-58254203 | None:intergenic | 20.0% |
| !! | TATAATTACCTTTTGATGCT+CGG | - | chr1_1:58253392-58253411 | None:intergenic | 25.0% |
| ! | TTAACTAACTTGGTTCATAA+AGG | - | chr1_1:58253756-58253775 | None:intergenic | 25.0% |
| !!! | CGTAATCATAGTTTCTTTTT+TGG | + | chr1_1:58253919-58253938 | Msa0031510:intron | 25.0% |
| ! | TGGTGCAATGAAAAATATAT+AGG | - | chr1_1:58253968-58253987 | None:intergenic | 25.0% |
| !!! | GGACGCAAATTTTAAAAATT+TGG | - | chr1_1:58253996-58254015 | None:intergenic | 25.0% |
| ! | TAAGGTAACAAACAACAAAT+TGG | - | chr1_1:58254017-58254036 | None:intergenic | 25.0% |
| ! | AAAAACAAATTGTGCAAAGT+CGG | - | chr1_1:58254099-58254118 | None:intergenic | 25.0% |
| ! | TAAGTTATAAACGCTGTTAT+AGG | - | chr1_1:58254596-58254615 | None:intergenic | 25.0% |
| ! | AGCGTTTATAACTTATTAAC+TGG | + | chr1_1:58254601-58254620 | Msa0031510:intron | 25.0% |
| ! | GCGTTTATAACTTATTAACT+GGG | + | chr1_1:58254602-58254621 | Msa0031510:intron | 25.0% |
| ! | TTATAACTTATTAACTGGGT+AGG | + | chr1_1:58254606-58254625 | Msa0031510:intron | 25.0% |
| ! | TAGTACTAAAATTGTCTGTT+TGG | + | chr1_1:58254950-58254969 | Msa0031510:CDS | 25.0% |
| !! | TATAATTACCTTTTGATGCT+CGG | - | chr1_1:58253392-58253411 | None:intergenic | 25.0% |
| ! | TTAACTAACTTGGTTCATAA+AGG | - | chr1_1:58253756-58253775 | None:intergenic | 25.0% |
| !!! | CGTAATCATAGTTTCTTTTT+TGG | + | chr1_1:58253919-58253938 | Msa0031510:intron | 25.0% |
| ! | TGGTGCAATGAAAAATATAT+AGG | - | chr1_1:58253968-58253987 | None:intergenic | 25.0% |
| !!! | GGACGCAAATTTTAAAAATT+TGG | - | chr1_1:58253996-58254015 | None:intergenic | 25.0% |
| ! | TAAGGTAACAAACAACAAAT+TGG | - | chr1_1:58254017-58254036 | None:intergenic | 25.0% |
| ! | AAAAACAAATTGTGCAAAGT+CGG | - | chr1_1:58254099-58254118 | None:intergenic | 25.0% |
| ! | TAAGTTATAAACGCTGTTAT+AGG | - | chr1_1:58254596-58254615 | None:intergenic | 25.0% |
| ! | AGCGTTTATAACTTATTAAC+TGG | + | chr1_1:58254601-58254620 | Msa0031510:intron | 25.0% |
| ! | GCGTTTATAACTTATTAACT+GGG | + | chr1_1:58254602-58254621 | Msa0031510:intron | 25.0% |
| ! | TTATAACTTATTAACTGGGT+AGG | + | chr1_1:58254606-58254625 | Msa0031510:intron | 25.0% |
| ! | TAGTACTAAAATTGTCTGTT+TGG | + | chr1_1:58254950-58254969 | Msa0031510:CDS | 25.0% |
| CAGGTCAATATTTAAAAGAC+TGG | + | chr1_1:58253289-58253308 | Msa0031510:five_prime_UTR | 30.0% | |
| TTAGAATGCTAATAAAGCCT+TGG | + | chr1_1:58253486-58253505 | Msa0031510:intron | 30.0% | |
| AACTTGGATGGAAAATAGAT+GGG | - | chr1_1:58253862-58253881 | None:intergenic | 30.0% | |
| ! | ATCTATTTTCCATCCAAGTT+GGG | + | chr1_1:58253862-58253881 | Msa0031510:intron | 30.0% |
| ! | ACTATGATTACGAAGCATTA+CGG | - | chr1_1:58253911-58253930 | None:intergenic | 30.0% |
| ACAATACTGAGGCTTAAAAT+AGG | - | chr1_1:58254057-58254076 | None:intergenic | 30.0% | |
| ATCAATATGAACTTGAACGA+AGG | - | chr1_1:58254126-58254145 | None:intergenic | 30.0% | |
| TACTCAGTACTTCATTACTT+TGG | + | chr1_1:58254194-58254213 | Msa0031510:intron | 30.0% | |
| TAACAGACTATATCAAGATG+AGG | - | chr1_1:58254277-58254296 | None:intergenic | 30.0% | |
| TATCTGCTCAGATATTTGAA+AGG | + | chr1_1:58254295-58254314 | Msa0031510:intron | 30.0% | |
| AGTGAATTCCTAAGAAAACA+TGG | - | chr1_1:58254459-58254478 | None:intergenic | 30.0% | |
| AGGAAAAGATATAACAGCAA+AGG | - | chr1_1:58254576-58254595 | None:intergenic | 30.0% | |
| AAGCTGCATATTGAGTATTT+GGG | - | chr1_1:58254848-58254867 | None:intergenic | 30.0% | |
| TAAGCTGCATATTGAGTATT+TGG | - | chr1_1:58254849-58254868 | None:intergenic | 30.0% | |
| !! | AGACAATTTTAGTACTACTC+TGG | - | chr1_1:58254947-58254966 | None:intergenic | 30.0% |
| TTGTTGAAGGAATAGAAGTT+AGG | + | chr1_1:58255153-58255172 | Msa0031510:CDS | 30.0% | |
| CAGGTCAATATTTAAAAGAC+TGG | + | chr1_1:58253289-58253308 | Msa0031510:five_prime_UTR | 30.0% | |
| TTAGAATGCTAATAAAGCCT+TGG | + | chr1_1:58253486-58253505 | Msa0031510:intron | 30.0% | |
| AACTTGGATGGAAAATAGAT+GGG | - | chr1_1:58253862-58253881 | None:intergenic | 30.0% | |
| ! | ATCTATTTTCCATCCAAGTT+GGG | + | chr1_1:58253862-58253881 | Msa0031510:intron | 30.0% |
| ! | ACTATGATTACGAAGCATTA+CGG | - | chr1_1:58253911-58253930 | None:intergenic | 30.0% |
| ACAATACTGAGGCTTAAAAT+AGG | - | chr1_1:58254057-58254076 | None:intergenic | 30.0% | |
| ATCAATATGAACTTGAACGA+AGG | - | chr1_1:58254126-58254145 | None:intergenic | 30.0% | |
| TACTCAGTACTTCATTACTT+TGG | + | chr1_1:58254194-58254213 | Msa0031510:intron | 30.0% | |
| TAACAGACTATATCAAGATG+AGG | - | chr1_1:58254277-58254296 | None:intergenic | 30.0% | |
| TATCTGCTCAGATATTTGAA+AGG | + | chr1_1:58254295-58254314 | Msa0031510:intron | 30.0% | |
| AGTGAATTCCTAAGAAAACA+TGG | - | chr1_1:58254459-58254478 | None:intergenic | 30.0% | |
| AGGAAAAGATATAACAGCAA+AGG | - | chr1_1:58254576-58254595 | None:intergenic | 30.0% | |
| AAGCTGCATATTGAGTATTT+GGG | - | chr1_1:58254848-58254867 | None:intergenic | 30.0% | |
| TAAGCTGCATATTGAGTATT+TGG | - | chr1_1:58254849-58254868 | None:intergenic | 30.0% | |
| !! | AGACAATTTTAGTACTACTC+TGG | - | chr1_1:58254947-58254966 | None:intergenic | 30.0% |
| TTGTTGAAGGAATAGAAGTT+AGG | + | chr1_1:58255153-58255172 | Msa0031510:CDS | 30.0% | |
| TTCTCAAGCATTAGTTAGTC+AGG | + | chr1_1:58253270-58253289 | Msa0031510:five_prime_UTR | 35.0% | |
| TGGATCTTATCTATTGTACC+AGG | + | chr1_1:58253309-58253328 | Msa0031510:five_prime_UTR | 35.0% | |
| TGAAAAATCCACACATCCTT+AGG | - | chr1_1:58253357-58253376 | None:intergenic | 35.0% | |
| !! | AGGATGTGTGGATTTTTCAA+AGG | + | chr1_1:58253358-58253377 | Msa0031510:exon | 35.0% |
| ATGAGAGAAATCAGCAGTTT+AGG | - | chr1_1:58253421-58253440 | None:intergenic | 35.0% | |
| ACTTAAGATCTAAGCTAACC+TGG | - | chr1_1:58253634-58253653 | None:intergenic | 35.0% | |
| GTTAATCAAGACATATTGGC+TGG | - | chr1_1:58253698-58253717 | None:intergenic | 35.0% | |
| CAACTTGGATGGAAAATAGA+TGG | - | chr1_1:58253863-58253882 | None:intergenic | 35.0% | |
| ! | CATCTATTTTCCATCCAAGT+TGG | + | chr1_1:58253861-58253880 | Msa0031510:intron | 35.0% |
| GAACTGTGTCTTTAGTTGTA+AGG | - | chr1_1:58254035-58254054 | None:intergenic | 35.0% | |
| GAACATGTGTAACAATACTG+AGG | - | chr1_1:58254068-58254087 | None:intergenic | 35.0% | |
| ! | TTTGAGGAAGACTTTGAAGA+CGG | + | chr1_1:58254230-58254249 | Msa0031510:intron | 35.0% |
| ! | AGATATTTGAAAGGCACACA+TGG | + | chr1_1:58254304-58254323 | Msa0031510:intron | 35.0% |
| ! | TACCAAAGCCATGTTTTCTT+AGG | + | chr1_1:58254448-58254467 | Msa0031510:intron | 35.0% |
| TTCCTAAGAAAACATGGCTT+TGG | - | chr1_1:58254453-58254472 | None:intergenic | 35.0% | |
| ACATCTAACAGTAGATTGCT+TGG | - | chr1_1:58254495-58254514 | None:intergenic | 35.0% | |
| CTAAGGGTTGAAAGAGTTAA+AGG | + | chr1_1:58254632-58254651 | Msa0031510:intron | 35.0% | |
| AGCTGCATATTGAGTATTTG+GGG | - | chr1_1:58254847-58254866 | None:intergenic | 35.0% | |
| TTCAAGATGATTGATGCCAA+AGG | + | chr1_1:58254876-58254895 | Msa0031510:CDS | 35.0% | |
| TGTCCTATAGAGTTATCAGT+TGG | + | chr1_1:58254909-58254928 | Msa0031510:CDS | 35.0% | |
| ACACCAACTGATAACTCTAT+AGG | - | chr1_1:58254915-58254934 | None:intergenic | 35.0% | |
| TTCAATTCAGGCTTAGAAGA+TGG | + | chr1_1:58255080-58255099 | Msa0031510:CDS | 35.0% | |
| ATGTTAAGGAGCTACATCTT+TGG | + | chr1_1:58255117-58255136 | Msa0031510:CDS | 35.0% | |
| GCTTAATGGTCTTCTTACTT+AGG | - | chr1_1:58255179-58255198 | None:intergenic | 35.0% | |
| ! | GTTCATGGAATGTTGCTTAA+TGG | - | chr1_1:58255193-58255212 | None:intergenic | 35.0% |
| AACATTCCATGAACTATGCA+AGG | + | chr1_1:58255199-58255218 | Msa0031510:three_prime_UTR | 35.0% | |
| ACATTCCATGAACTATGCAA+GGG | + | chr1_1:58255200-58255219 | Msa0031510:three_prime_UTR | 35.0% | |
| TTCTCAAGCATTAGTTAGTC+AGG | + | chr1_1:58253270-58253289 | Msa0031510:five_prime_UTR | 35.0% | |
| TGGATCTTATCTATTGTACC+AGG | + | chr1_1:58253309-58253328 | Msa0031510:five_prime_UTR | 35.0% | |
| TGAAAAATCCACACATCCTT+AGG | - | chr1_1:58253357-58253376 | None:intergenic | 35.0% | |
| !! | AGGATGTGTGGATTTTTCAA+AGG | + | chr1_1:58253358-58253377 | Msa0031510:exon | 35.0% |
| ATGAGAGAAATCAGCAGTTT+AGG | - | chr1_1:58253421-58253440 | None:intergenic | 35.0% | |
| ACTTAAGATCTAAGCTAACC+TGG | - | chr1_1:58253634-58253653 | None:intergenic | 35.0% | |
| GTTAATCAAGACATATTGGC+TGG | - | chr1_1:58253698-58253717 | None:intergenic | 35.0% | |
| CAACTTGGATGGAAAATAGA+TGG | - | chr1_1:58253863-58253882 | None:intergenic | 35.0% | |
| ! | CATCTATTTTCCATCCAAGT+TGG | + | chr1_1:58253861-58253880 | Msa0031510:intron | 35.0% |
| GAACTGTGTCTTTAGTTGTA+AGG | - | chr1_1:58254035-58254054 | None:intergenic | 35.0% | |
| GAACATGTGTAACAATACTG+AGG | - | chr1_1:58254068-58254087 | None:intergenic | 35.0% | |
| ! | TTTGAGGAAGACTTTGAAGA+CGG | + | chr1_1:58254230-58254249 | Msa0031510:intron | 35.0% |
| ! | AGATATTTGAAAGGCACACA+TGG | + | chr1_1:58254304-58254323 | Msa0031510:intron | 35.0% |
| ! | TACCAAAGCCATGTTTTCTT+AGG | + | chr1_1:58254448-58254467 | Msa0031510:intron | 35.0% |
| TTCCTAAGAAAACATGGCTT+TGG | - | chr1_1:58254453-58254472 | None:intergenic | 35.0% | |
| ACATCTAACAGTAGATTGCT+TGG | - | chr1_1:58254495-58254514 | None:intergenic | 35.0% | |
| CTAAGGGTTGAAAGAGTTAA+AGG | + | chr1_1:58254632-58254651 | Msa0031510:intron | 35.0% | |
| AGCTGCATATTGAGTATTTG+GGG | - | chr1_1:58254847-58254866 | None:intergenic | 35.0% | |
| TTCAAGATGATTGATGCCAA+AGG | + | chr1_1:58254876-58254895 | Msa0031510:CDS | 35.0% | |
| TGTCCTATAGAGTTATCAGT+TGG | + | chr1_1:58254909-58254928 | Msa0031510:CDS | 35.0% | |
| ACACCAACTGATAACTCTAT+AGG | - | chr1_1:58254915-58254934 | None:intergenic | 35.0% | |
| TTCAATTCAGGCTTAGAAGA+TGG | + | chr1_1:58255080-58255099 | Msa0031510:CDS | 35.0% | |
| ATGTTAAGGAGCTACATCTT+TGG | + | chr1_1:58255117-58255136 | Msa0031510:CDS | 35.0% | |
| GCTTAATGGTCTTCTTACTT+AGG | - | chr1_1:58255179-58255198 | None:intergenic | 35.0% | |
| ! | GTTCATGGAATGTTGCTTAA+TGG | - | chr1_1:58255193-58255212 | None:intergenic | 35.0% |
| AACATTCCATGAACTATGCA+AGG | + | chr1_1:58255199-58255218 | Msa0031510:three_prime_UTR | 35.0% | |
| ACATTCCATGAACTATGCAA+GGG | + | chr1_1:58255200-58255219 | Msa0031510:three_prime_UTR | 35.0% | |
| TCTTATCTATTGTACCAGGC+TGG | + | chr1_1:58253313-58253332 | Msa0031510:five_prime_UTR | 40.0% | |
| TCTTCATCTTGGGATACCTA+AGG | + | chr1_1:58253338-58253357 | Msa0031510:five_prime_UTR | 40.0% | |
| GCTGCATTTCAAGATATCCA+AGG | - | chr1_1:58253506-58253525 | None:intergenic | 40.0% | |
| TAGATCTCTCAGCATTGCTT+GGG | + | chr1_1:58253566-58253585 | Msa0031510:CDS | 40.0% | |
| ATGATAAGCGCTATTGGAAC+TGG | + | chr1_1:58253592-58253611 | Msa0031510:CDS | 40.0% | |
| ! | TTACGAAGCATTACGGATGA+AGG | - | chr1_1:58253904-58253923 | None:intergenic | 40.0% |
| !! | TGGACATCAGTTAGTCTTTG+AGG | + | chr1_1:58254214-58254233 | Msa0031510:intron | 40.0% |
| !! | GATGTTGATTTGTGCCATTG+TGG | + | chr1_1:58254510-58254529 | Msa0031510:intron | 40.0% |
| CAAAGGTAATTCACTAGCCA+CGG | - | chr1_1:58254559-58254578 | None:intergenic | 40.0% | |
| ATTAACTGGGTAGGTCACTA+AGG | + | chr1_1:58254615-58254634 | Msa0031510:intron | 40.0% | |
| TTAACTGGGTAGGTCACTAA+GGG | + | chr1_1:58254616-58254635 | Msa0031510:intron | 40.0% | |
| CAAGAAGTTGAGCAACTTCA+GGG | - | chr1_1:58254776-58254795 | None:intergenic | 40.0% | |
| TCAAGAAGTTGAGCAACTTC+AGG | - | chr1_1:58254777-58254796 | None:intergenic | 40.0% | |
| TTGCTCAACTTCTTGAAGTG+TGG | + | chr1_1:58254781-58254800 | Msa0031510:CDS | 40.0% | |
| TGTGGTGGCTTGATATTAGT+GGG | + | chr1_1:58254799-58254818 | Msa0031510:CDS | 40.0% | |
| AGTATTTGGGGACAAGCTAA+GGG | - | chr1_1:58254835-58254854 | None:intergenic | 40.0% | |
| !! | AGGACAGTTCTGAAATCCTT+TGG | - | chr1_1:58254895-58254914 | None:intergenic | 40.0% |
| TGTCTGTTTGGATCCAAATG+TGG | + | chr1_1:58254962-58254981 | Msa0031510:CDS | 40.0% | |
| TTTGGATCCAAATGTGGAAG+TGG | + | chr1_1:58254968-58254987 | Msa0031510:CDS | 40.0% | |
| AGACGTCCTGATGAATGTTA+AGG | + | chr1_1:58255103-58255122 | Msa0031510:CDS | 40.0% | |
| GTAGCTCCTTAACATTCATC+AGG | - | chr1_1:58255112-58255131 | None:intergenic | 40.0% | |
| AAGAGTGGTCTCTTTGTTGA+AGG | + | chr1_1:58255140-58255159 | Msa0031510:CDS | 40.0% | |
| CATTCCATGAACTATGCAAG+GGG | + | chr1_1:58255201-58255220 | Msa0031510:three_prime_UTR | 40.0% | |
| TCTTATCTATTGTACCAGGC+TGG | + | chr1_1:58253313-58253332 | Msa0031510:five_prime_UTR | 40.0% | |
| TCTTCATCTTGGGATACCTA+AGG | + | chr1_1:58253338-58253357 | Msa0031510:five_prime_UTR | 40.0% | |
| GCTGCATTTCAAGATATCCA+AGG | - | chr1_1:58253506-58253525 | None:intergenic | 40.0% | |
| TAGATCTCTCAGCATTGCTT+GGG | + | chr1_1:58253566-58253585 | Msa0031510:CDS | 40.0% | |
| ATGATAAGCGCTATTGGAAC+TGG | + | chr1_1:58253592-58253611 | Msa0031510:CDS | 40.0% | |
| ! | TTACGAAGCATTACGGATGA+AGG | - | chr1_1:58253904-58253923 | None:intergenic | 40.0% |
| !! | TGGACATCAGTTAGTCTTTG+AGG | + | chr1_1:58254214-58254233 | Msa0031510:intron | 40.0% |
| !! | GATGTTGATTTGTGCCATTG+TGG | + | chr1_1:58254510-58254529 | Msa0031510:intron | 40.0% |
| CAAAGGTAATTCACTAGCCA+CGG | - | chr1_1:58254559-58254578 | None:intergenic | 40.0% | |
| ATTAACTGGGTAGGTCACTA+AGG | + | chr1_1:58254615-58254634 | Msa0031510:intron | 40.0% | |
| TTAACTGGGTAGGTCACTAA+GGG | + | chr1_1:58254616-58254635 | Msa0031510:intron | 40.0% | |
| CAAGAAGTTGAGCAACTTCA+GGG | - | chr1_1:58254776-58254795 | None:intergenic | 40.0% | |
| TCAAGAAGTTGAGCAACTTC+AGG | - | chr1_1:58254777-58254796 | None:intergenic | 40.0% | |
| TTGCTCAACTTCTTGAAGTG+TGG | + | chr1_1:58254781-58254800 | Msa0031510:CDS | 40.0% | |
| TGTGGTGGCTTGATATTAGT+GGG | + | chr1_1:58254799-58254818 | Msa0031510:CDS | 40.0% | |
| AGTATTTGGGGACAAGCTAA+GGG | - | chr1_1:58254835-58254854 | None:intergenic | 40.0% | |
| !! | AGGACAGTTCTGAAATCCTT+TGG | - | chr1_1:58254895-58254914 | None:intergenic | 40.0% |
| TGTCTGTTTGGATCCAAATG+TGG | + | chr1_1:58254962-58254981 | Msa0031510:CDS | 40.0% | |
| TTTGGATCCAAATGTGGAAG+TGG | + | chr1_1:58254968-58254987 | Msa0031510:CDS | 40.0% | |
| AGACGTCCTGATGAATGTTA+AGG | + | chr1_1:58255103-58255122 | Msa0031510:CDS | 40.0% | |
| GTAGCTCCTTAACATTCATC+AGG | - | chr1_1:58255112-58255131 | None:intergenic | 40.0% | |
| AAGAGTGGTCTCTTTGTTGA+AGG | + | chr1_1:58255140-58255159 | Msa0031510:CDS | 40.0% | |
| CATTCCATGAACTATGCAAG+GGG | + | chr1_1:58255201-58255220 | Msa0031510:three_prime_UTR | 40.0% | |
| TTGGGATACCTAAGGATGTG+TGG | + | chr1_1:58253346-58253365 | Msa0031510:exon | 45.0% | |
| AGACAGTTCCGAGCATCAAA+AGG | + | chr1_1:58253381-58253400 | Msa0031510:CDS | 45.0% | |
| CTAGATCTCTCAGCATTGCT+TGG | + | chr1_1:58253565-58253584 | Msa0031510:CDS | 45.0% | |
| AGATCTCTCAGCATTGCTTG+GGG | + | chr1_1:58253567-58253586 | Msa0031510:CDS | 45.0% | |
| GGATTAATATGCCTGACTCC+AGG | + | chr1_1:58253613-58253632 | Msa0031510:CDS | 45.0% | |
| ATCTAAGCTAACCTGGAGTC+AGG | - | chr1_1:58253627-58253646 | None:intergenic | 45.0% | |
| ATCCTGATGCTTAGCTGAAG+TGG | - | chr1_1:58253806-58253825 | None:intergenic | 45.0% | |
| TCAGCTAAGCATCAGGATTC+AGG | + | chr1_1:58253808-58253827 | Msa0031510:intron | 45.0% | |
| TGGGTGAAGACTGAATAGCA+TGG | - | chr1_1:58253843-58253862 | None:intergenic | 45.0% | |
| GCATTACGGATGAAGGATCT+TGG | - | chr1_1:58253897-58253916 | None:intergenic | 45.0% | |
| ! | GATTGGTTGTCGCAGCAATT+AGG | - | chr1_1:58253946-58253965 | None:intergenic | 45.0% |
| GTCCTATGCAAAAGCTGACT+AGG | + | chr1_1:58254377-58254396 | Msa0031510:intron | 45.0% | |
| GTAAGATGTAGTGCATCTGC+AGG | - | chr1_1:58254431-58254450 | None:intergenic | 45.0% | |
| !! | GTTGATTTGTGCCATTGTGG+AGG | + | chr1_1:58254513-58254532 | Msa0031510:intron | 45.0% |
| !!! | TTGCAGTGCTACTTTTGAGC+AGG | + | chr1_1:58254748-58254767 | Msa0031510:intron | 45.0% |
| CTCAACTTCTTGAAGTGTGG+TGG | + | chr1_1:58254784-58254803 | Msa0031510:CDS | 45.0% | |
| GTGTGGTGGCTTGATATTAG+TGG | + | chr1_1:58254798-58254817 | Msa0031510:CDS | 45.0% | |
| GAGTATTTGGGGACAAGCTA+AGG | - | chr1_1:58254836-58254855 | None:intergenic | 45.0% | |
| !! | GAGTTATCAGTTGGTGTCGA+AGG | + | chr1_1:58254918-58254937 | Msa0031510:CDS | 45.0% |
| !! | TTATCAGTTGGTGTCGAAGG+TGG | + | chr1_1:58254921-58254940 | Msa0031510:CDS | 45.0% |
| TCCAAATGTGGAAGTGGAAG+TGG | + | chr1_1:58254974-58254993 | Msa0031510:CDS | 45.0% | |
| TCCACTTCCACTTCCACATT+TGG | - | chr1_1:58254978-58254997 | None:intergenic | 45.0% | |
| AATGTGGAAGTGGAAGTGGA+AGG | + | chr1_1:58254978-58254997 | Msa0031510:CDS | 45.0% | |
| TGGGTGGTTGGAGATTGAAA+TGG | + | chr1_1:58255052-58255071 | Msa0031510:CDS | 45.0% | |
| GGGTGGTTGGAGATTGAAAT+GGG | + | chr1_1:58255053-58255072 | Msa0031510:CDS | 45.0% | |
| GGTGGTTGGAGATTGAAATG+GGG | + | chr1_1:58255054-58255073 | Msa0031510:CDS | 45.0% | |
| GTGGTTGGAGATTGAAATGG+GGG | + | chr1_1:58255055-58255074 | Msa0031510:CDS | 45.0% | |
| GAAATGGGGGAGTTCAATTC+AGG | + | chr1_1:58255068-58255087 | Msa0031510:CDS | 45.0% | |
| ! | GAGCTACATCTTTGGAAGAG+TGG | + | chr1_1:58255125-58255144 | Msa0031510:CDS | 45.0% |
| AAGACCCCTTGCATAGTTCA+TGG | - | chr1_1:58255208-58255227 | None:intergenic | 45.0% | |
| ! | TATGCAAGGGGTCTTGTGTT+TGG | + | chr1_1:58255213-58255232 | Msa0031510:three_prime_UTR | 45.0% |
| TTGGGATACCTAAGGATGTG+TGG | + | chr1_1:58253346-58253365 | Msa0031510:exon | 45.0% | |
| AGACAGTTCCGAGCATCAAA+AGG | + | chr1_1:58253381-58253400 | Msa0031510:CDS | 45.0% | |
| CTAGATCTCTCAGCATTGCT+TGG | + | chr1_1:58253565-58253584 | Msa0031510:CDS | 45.0% | |
| AGATCTCTCAGCATTGCTTG+GGG | + | chr1_1:58253567-58253586 | Msa0031510:CDS | 45.0% | |
| GGATTAATATGCCTGACTCC+AGG | + | chr1_1:58253613-58253632 | Msa0031510:CDS | 45.0% | |
| ATCTAAGCTAACCTGGAGTC+AGG | - | chr1_1:58253627-58253646 | None:intergenic | 45.0% | |
| ATCCTGATGCTTAGCTGAAG+TGG | - | chr1_1:58253806-58253825 | None:intergenic | 45.0% | |
| TCAGCTAAGCATCAGGATTC+AGG | + | chr1_1:58253808-58253827 | Msa0031510:intron | 45.0% | |
| TGGGTGAAGACTGAATAGCA+TGG | - | chr1_1:58253843-58253862 | None:intergenic | 45.0% | |
| GCATTACGGATGAAGGATCT+TGG | - | chr1_1:58253897-58253916 | None:intergenic | 45.0% | |
| ! | GATTGGTTGTCGCAGCAATT+AGG | - | chr1_1:58253946-58253965 | None:intergenic | 45.0% |
| GTCCTATGCAAAAGCTGACT+AGG | + | chr1_1:58254377-58254396 | Msa0031510:intron | 45.0% | |
| GTAAGATGTAGTGCATCTGC+AGG | - | chr1_1:58254431-58254450 | None:intergenic | 45.0% | |
| !! | GTTGATTTGTGCCATTGTGG+AGG | + | chr1_1:58254513-58254532 | Msa0031510:intron | 45.0% |
| !!! | TTGCAGTGCTACTTTTGAGC+AGG | + | chr1_1:58254748-58254767 | Msa0031510:intron | 45.0% |
| CTCAACTTCTTGAAGTGTGG+TGG | + | chr1_1:58254784-58254803 | Msa0031510:CDS | 45.0% | |
| GTGTGGTGGCTTGATATTAG+TGG | + | chr1_1:58254798-58254817 | Msa0031510:CDS | 45.0% | |
| GAGTATTTGGGGACAAGCTA+AGG | - | chr1_1:58254836-58254855 | None:intergenic | 45.0% | |
| !! | GAGTTATCAGTTGGTGTCGA+AGG | + | chr1_1:58254918-58254937 | Msa0031510:CDS | 45.0% |
| !! | TTATCAGTTGGTGTCGAAGG+TGG | + | chr1_1:58254921-58254940 | Msa0031510:CDS | 45.0% |
| TCCAAATGTGGAAGTGGAAG+TGG | + | chr1_1:58254974-58254993 | Msa0031510:CDS | 45.0% | |
| TCCACTTCCACTTCCACATT+TGG | - | chr1_1:58254978-58254997 | None:intergenic | 45.0% | |
| AATGTGGAAGTGGAAGTGGA+AGG | + | chr1_1:58254978-58254997 | Msa0031510:CDS | 45.0% | |
| TGGGTGGTTGGAGATTGAAA+TGG | + | chr1_1:58255052-58255071 | Msa0031510:CDS | 45.0% | |
| GGGTGGTTGGAGATTGAAAT+GGG | + | chr1_1:58255053-58255072 | Msa0031510:CDS | 45.0% | |
| GGTGGTTGGAGATTGAAATG+GGG | + | chr1_1:58255054-58255073 | Msa0031510:CDS | 45.0% | |
| GTGGTTGGAGATTGAAATGG+GGG | + | chr1_1:58255055-58255074 | Msa0031510:CDS | 45.0% | |
| GAAATGGGGGAGTTCAATTC+AGG | + | chr1_1:58255068-58255087 | Msa0031510:CDS | 45.0% | |
| ! | GAGCTACATCTTTGGAAGAG+TGG | + | chr1_1:58255125-58255144 | Msa0031510:CDS | 45.0% |
| AAGACCCCTTGCATAGTTCA+TGG | - | chr1_1:58255208-58255227 | None:intergenic | 45.0% | |
| ! | TATGCAAGGGGTCTTGTGTT+TGG | + | chr1_1:58255213-58255232 | Msa0031510:three_prime_UTR | 45.0% |
| TAGTCCGTACACGCGTAGTA+CGG | - | chr1_1:58253237-58253256 | None:intergenic | 50.0% | |
| CAGGCTGGCATCTTCATCTT+GGG | + | chr1_1:58253328-58253347 | Msa0031510:five_prime_UTR | 50.0% | |
| GGGGTGATGATAAGCGCTAT+TGG | + | chr1_1:58253586-58253605 | Msa0031510:CDS | 50.0% | |
| ATGCTTAGCTGAAGTGGTGG+TGG | - | chr1_1:58253800-58253819 | None:intergenic | 50.0% | |
| CTGATGCTTAGCTGAAGTGG+TGG | - | chr1_1:58253803-58253822 | None:intergenic | 50.0% | |
| CACCACTTCAGCTAAGCATC+AGG | + | chr1_1:58253801-58253820 | Msa0031510:intron | 50.0% | |
| TGCTTCAAGCCCAACTTGGA+TGG | - | chr1_1:58253874-58253893 | None:intergenic | 50.0% | |
| ! | TTGGTGCTTCAAGCCCAACT+TGG | - | chr1_1:58253878-58253897 | None:intergenic | 50.0% |
| TGCAGCTGCAAGTGTAAGGA+TGG | - | chr1_1:58254355-58254374 | None:intergenic | 50.0% | |
| ACTCTGCAGCTGCAAGTGTA+AGG | - | chr1_1:58254359-58254378 | None:intergenic | 50.0% | |
| ! | GGCCTAGTCAGCTTTTGCAT+AGG | - | chr1_1:58254382-58254401 | None:intergenic | 50.0% |
| TAGGCCACATGTGTAGACAC+TGG | + | chr1_1:58254396-58254415 | Msa0031510:intron | 50.0% | |
| GTGTCCAGTGTCTACACATG+TGG | - | chr1_1:58254403-58254422 | None:intergenic | 50.0% | |
| ACAGTACTCAGCCTCCACAA+TGG | - | chr1_1:58254527-58254546 | None:intergenic | 50.0% | |
| TGGAAGTGGAAGTGGAAGGT+AGG | + | chr1_1:58254982-58255001 | Msa0031510:CDS | 50.0% | |
| GTCCTAGTGTGAGAAGCGAT+GGG | + | chr1_1:58255033-58255052 | Msa0031510:CDS | 50.0% | |
| TAGTCCGTACACGCGTAGTA+CGG | - | chr1_1:58253237-58253256 | None:intergenic | 50.0% | |
| CAGGCTGGCATCTTCATCTT+GGG | + | chr1_1:58253328-58253347 | Msa0031510:five_prime_UTR | 50.0% | |
| GGGGTGATGATAAGCGCTAT+TGG | + | chr1_1:58253586-58253605 | Msa0031510:CDS | 50.0% | |
| ATGCTTAGCTGAAGTGGTGG+TGG | - | chr1_1:58253800-58253819 | None:intergenic | 50.0% | |
| CTGATGCTTAGCTGAAGTGG+TGG | - | chr1_1:58253803-58253822 | None:intergenic | 50.0% | |
| CACCACTTCAGCTAAGCATC+AGG | + | chr1_1:58253801-58253820 | Msa0031510:intron | 50.0% | |
| TGCTTCAAGCCCAACTTGGA+TGG | - | chr1_1:58253874-58253893 | None:intergenic | 50.0% | |
| ! | TTGGTGCTTCAAGCCCAACT+TGG | - | chr1_1:58253878-58253897 | None:intergenic | 50.0% |
| TGCAGCTGCAAGTGTAAGGA+TGG | - | chr1_1:58254355-58254374 | None:intergenic | 50.0% | |
| ACTCTGCAGCTGCAAGTGTA+AGG | - | chr1_1:58254359-58254378 | None:intergenic | 50.0% | |
| ! | GGCCTAGTCAGCTTTTGCAT+AGG | - | chr1_1:58254382-58254401 | None:intergenic | 50.0% |
| TAGGCCACATGTGTAGACAC+TGG | + | chr1_1:58254396-58254415 | Msa0031510:intron | 50.0% | |
| GTGTCCAGTGTCTACACATG+TGG | - | chr1_1:58254403-58254422 | None:intergenic | 50.0% | |
| ACAGTACTCAGCCTCCACAA+TGG | - | chr1_1:58254527-58254546 | None:intergenic | 50.0% | |
| TGGAAGTGGAAGTGGAAGGT+AGG | + | chr1_1:58254982-58255001 | Msa0031510:CDS | 50.0% | |
| GTCCTAGTGTGAGAAGCGAT+GGG | + | chr1_1:58255033-58255052 | Msa0031510:CDS | 50.0% | |
| TCACCCGTACTACGCGTGTA+CGG | + | chr1_1:58253230-58253249 | Msa0031510:five_prime_UTR | 55.0% | |
| AGTCCGTACACGCGTAGTAC+GGG | - | chr1_1:58253236-58253255 | None:intergenic | 55.0% | |
| CCAAGATGAAGATGCCAGCC+TGG | - | chr1_1:58253330-58253349 | None:intergenic | 55.0% | |
| CCAGGCTGGCATCTTCATCT+TGG | + | chr1_1:58253327-58253346 | Msa0031510:five_prime_UTR | 55.0% | |
| ! | TGGAGGCTGAGTACTGTCTC+TGG | + | chr1_1:58254530-58254549 | Msa0031510:intron | 55.0% |
| AGGCAGCATGACAGAGCAGT+AGG | + | chr1_1:58255002-58255021 | Msa0031510:CDS | 55.0% | |
| CGTCCTAGTGTGAGAAGCGA+TGG | + | chr1_1:58255032-58255051 | Msa0031510:CDS | 55.0% | |
| CACCCATCGCTTCTCACACT+AGG | - | chr1_1:58255038-58255057 | None:intergenic | 55.0% | |
| CTAGTGTGAGAAGCGATGGG+TGG | + | chr1_1:58255036-58255055 | Msa0031510:CDS | 55.0% | |
| TGTGAGAAGCGATGGGTGGT+TGG | + | chr1_1:58255040-58255059 | Msa0031510:CDS | 55.0% | |
| ! | GCAAGGGGTCTTGTGTTTGG+TGG | + | chr1_1:58255216-58255235 | Msa0031510:three_prime_UTR | 55.0% |
| TCACCCGTACTACGCGTGTA+CGG | + | chr1_1:58253230-58253249 | Msa0031510:five_prime_UTR | 55.0% | |
| AGTCCGTACACGCGTAGTAC+GGG | - | chr1_1:58253236-58253255 | None:intergenic | 55.0% | |
| CCAAGATGAAGATGCCAGCC+TGG | - | chr1_1:58253330-58253349 | None:intergenic | 55.0% | |
| CCAGGCTGGCATCTTCATCT+TGG | + | chr1_1:58253327-58253346 | Msa0031510:five_prime_UTR | 55.0% | |
| ! | TGGAGGCTGAGTACTGTCTC+TGG | + | chr1_1:58254530-58254549 | Msa0031510:intron | 55.0% |
| AGGCAGCATGACAGAGCAGT+AGG | + | chr1_1:58255002-58255021 | Msa0031510:CDS | 55.0% | |
| CGTCCTAGTGTGAGAAGCGA+TGG | + | chr1_1:58255032-58255051 | Msa0031510:CDS | 55.0% | |
| CACCCATCGCTTCTCACACT+AGG | - | chr1_1:58255038-58255057 | None:intergenic | 55.0% | |
| CTAGTGTGAGAAGCGATGGG+TGG | + | chr1_1:58255036-58255055 | Msa0031510:CDS | 55.0% | |
| TGTGAGAAGCGATGGGTGGT+TGG | + | chr1_1:58255040-58255059 | Msa0031510:CDS | 55.0% | |
| ! | GCAAGGGGTCTTGTGTTTGG+TGG | + | chr1_1:58255216-58255235 | Msa0031510:three_prime_UTR | 55.0% |
| AGTACTGTCTCTGGCAGCCG+TGG | + | chr1_1:58254539-58254558 | Msa0031510:intron | 60.0% | |
| AGTACTGTCTCTGGCAGCCG+TGG | + | chr1_1:58254539-58254558 | Msa0031510:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 58253223 | 58255286 | 58253223 | ID=Msa0031510;Name=Msa0031510 |
| chr1_1 | mRNA | 58253223 | 58255286 | 58253223 | ID=Msa0031510-mRNA-1;Parent=Msa0031510;Name=Msa0031510-mRNA-1;_AED=0.04;_eAED=0.04;_QI=138|1|1|1|1|1|3|102|188 |
| chr1_1 | exon | 58253223 | 58253402 | 58253223 | ID=Msa0031510-mRNA-1:exon:17735;Parent=Msa0031510-mRNA-1 |
| chr1_1 | exon | 58253525 | 58253634 | 58253525 | ID=Msa0031510-mRNA-1:exon:17736;Parent=Msa0031510-mRNA-1 |
| chr1_1 | exon | 58254770 | 58255286 | 58254770 | ID=Msa0031510-mRNA-1:exon:17737;Parent=Msa0031510-mRNA-1 |
| chr1_1 | five_prime_UTR | 58253223 | 58253360 | 58253223 | ID=Msa0031510-mRNA-1:five_prime_utr;Parent=Msa0031510-mRNA-1 |
| chr1_1 | CDS | 58253361 | 58253402 | 58253361 | ID=Msa0031510-mRNA-1:cds;Parent=Msa0031510-mRNA-1 |
| chr1_1 | CDS | 58253525 | 58253634 | 58253525 | ID=Msa0031510-mRNA-1:cds;Parent=Msa0031510-mRNA-1 |
| chr1_1 | CDS | 58254770 | 58255184 | 58254770 | ID=Msa0031510-mRNA-1:cds;Parent=Msa0031510-mRNA-1 |
| chr1_1 | three_prime_UTR | 58255185 | 58255286 | 58255185 | ID=Msa0031510-mRNA-1:three_prime_utr;Parent=Msa0031510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
