Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306520 | XP_013447054.1 | 98.026 | 456 | 9 | 0 | 1 | 456 | 1 | 456 | 0.0 | 920 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306520 | sp|Q9FN67|Y5133_ARATH | 62.889 | 450 | 152 | 6 | 16 | 454 | 9 | 454 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306520 | A0A072TV73 | 98.026 | 456 | 9 | 0 | 1 | 456 | 1 | 456 | 0.0 | 920 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0654420 | Msa1306520 | 0.820095 | 8.218326e-53 | -8.615850e-47 |
| Msa0654480 | Msa1306520 | 0.823963 | 1.043512e-53 | -8.615850e-47 |
| Msa0697350 | Msa1306520 | 0.808716 | 2.701131e-50 | -8.615850e-47 |
| Msa0146050 | Msa1306520 | 0.802147 | 6.440324e-49 | -8.615850e-47 |
| Msa1306520 | Msa1361710 | 0.809586 | 1.758236e-50 | -8.615850e-47 |
| Msa1306520 | Msa1375420 | 0.961695 | 5.313541e-120 | -8.615850e-47 |
| Msa1306520 | Msa1414810 | 0.819053 | 1.420916e-52 | -8.615850e-47 |
| Msa1306520 | Msa1427000 | 0.802613 | 5.163817e-49 | -8.615850e-47 |
| Msa1306520 | Msa1432830 | 0.871585 | 6.111923e-67 | -8.615850e-47 |
| Msa0390160 | Msa1306520 | 0.810082 | 1.375516e-50 | -8.615850e-47 |
| Msa0390170 | Msa1306520 | 0.824633 | 7.260278e-54 | -8.615850e-47 |
| Msa1162750 | Msa1306520 | 0.801892 | 7.266183e-49 | -8.615850e-47 |
| Msa1200270 | Msa1306520 | 0.801676 | 8.046788e-49 | -8.615850e-47 |
| Msa0545820 | Msa1306520 | 0.805814 | 1.113109e-49 | -8.615850e-47 |
| Msa0559660 | Msa1306520 | 0.821657 | 3.593322e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306520 | MtrunA17_Chr8g0387041 | 98.026 | 456 | 9 | 0 | 1 | 456 | 1 | 456 | 0.0 | 920 |
| Msa1306520 | MtrunA17_Chr7g0255031 | 30.901 | 466 | 280 | 13 | 17 | 452 | 16 | 469 | 3.02e-65 | 217 |
| Msa1306520 | MtrunA17_Chr4g0074051 | 23.222 | 478 | 276 | 18 | 20 | 453 | 8 | 438 | 5.16e-20 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1306520 | AT5G41330.2 | 62.889 | 450 | 152 | 6 | 16 | 454 | 9 | 454 | 0.0 | 567 |
| Msa1306520 | AT5G41330.1 | 62.889 | 450 | 152 | 6 | 16 | 454 | 9 | 454 | 0.0 | 567 |
| Msa1306520 | AT3G09030.1 | 32.222 | 450 | 282 | 12 | 20 | 453 | 10 | 452 | 2.28e-64 | 214 |
| Msa1306520 | AT4G30940.1 | 28.662 | 314 | 190 | 12 | 20 | 316 | 8 | 304 | 1.59e-19 | 90.9 |
| Msa1306520 | AT2G24240.1 | 25.383 | 457 | 287 | 18 | 20 | 451 | 8 | 435 | 3.26e-19 | 90.1 |
Find 114 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGGTCCTTCTGGTGTTTC+TGG | 0.144577 | 8_4:+1478854 | Msa1306520:CDS |
| AGGAGAGTCTCTTCCGTTTA+AGG | 0.149332 | 8_4:-1478357 | None:intergenic |
| CATAATCTGTTGATGGCTTC+TGG | 0.224547 | 8_4:+1478824 | Msa1306520:CDS |
| CGGGTTACAGATTCTTGATT+TGG | 0.229474 | 8_4:+1478553 | Msa1306520:CDS |
| GCGTTAGAATTGTTGATTTC+CGG | 0.235110 | 8_4:-1478460 | None:intergenic |
| AACAATTCTAACGCACTTTA+CGG | 0.238094 | 8_4:+1478469 | Msa1306520:CDS |
| AGGAGGAGAGAGAAAATTTC+AGG | 0.240586 | 8_4:-1478170 | None:intergenic |
| TTCGCTCTGGCAACGTTGTT+TGG | 0.244172 | 8_4:+1478897 | Msa1306520:CDS |
| ACGTGAAGGATACATTAAAT+TGG | 0.258798 | 8_4:+1478585 | Msa1306520:CDS |
| TTTCTGGTAATGTTAGGTTA+TGG | 0.263715 | 8_4:+1478870 | Msa1306520:CDS |
| TTCAAAATGCCACCCTTTGC+AGG | 0.266480 | 8_4:+1477978 | None:intergenic |
| GATGGGGAGGGTGCAAGATA+TGG | 0.270075 | 8_4:+1479225 | Msa1306520:CDS |
| TGTAGCAGTTTCTGATTCTT+TGG | 0.273093 | 8_4:+1478952 | Msa1306520:CDS |
| CTGGTGTTTCTGGTAATGTT+AGG | 0.286245 | 8_4:+1478864 | Msa1306520:CDS |
| TAATGGGTTCTTCTAATAAC+AGG | 0.298676 | 8_4:+1479185 | Msa1306520:CDS |
| TTTAAAGTTGGTGTGAATTC+TGG | 0.298812 | 8_4:+1478983 | Msa1306520:CDS |
| GGGTCCCACAGTGGTCCTTC+TGG | 0.309924 | 8_4:+1478845 | Msa1306520:CDS |
| ATCCACTGCAGTTTCGTTGC+CGG | 0.312640 | 8_4:-1478794 | None:intergenic |
| AAGATCACAAATTTGGCATT+TGG | 0.317695 | 8_4:+1479256 | Msa1306520:CDS |
| ATCTTGAAGGTCAAAGGATT+TGG | 0.318959 | 8_4:-1478228 | None:intergenic |
| TTCTGGTAATGTTAGGTTAT+GGG | 0.332159 | 8_4:+1478871 | Msa1306520:CDS |
| AAGTTTGGCAGAGTTCTTCT+AGG | 0.335393 | 8_4:+1479323 | Msa1306520:CDS |
| CGATATCGATTCAGCGATTC+CGG | 0.338562 | 8_4:+1478775 | Msa1306520:CDS |
| ATCATAAACAACAATAGAAT+TGG | 0.345014 | 8_4:-1478699 | None:intergenic |
| AGGTGCTAAGATCACAAATT+TGG | 0.365344 | 8_4:+1479249 | Msa1306520:CDS |
| GGCTTTGGAAGGAAGATTAC+CGG | 0.366750 | 8_4:-1478207 | None:intergenic |
| TCGCTCTGGCAACGTTGTTT+GGG | 0.369820 | 8_4:+1478898 | Msa1306520:CDS |
| TTGTGAGCAATCTCCGTAAC+AGG | 0.383544 | 8_4:-1478737 | None:intergenic |
| TGGGAAAACGTAACGAAATC+TGG | 0.387225 | 8_4:+1478605 | Msa1306520:CDS |
| ATAATCTGTTGATGGCTTCT+GGG | 0.388853 | 8_4:+1478825 | Msa1306520:CDS |
| CGTGAAGGATACATTAAATT+GGG | 0.393397 | 8_4:+1478586 | Msa1306520:CDS |
| TTGTGAGATTGTTGAGAAGA+AGG | 0.396912 | 8_4:-1478111 | None:intergenic |
| TCACTTCAATTACCCTTAAA+CGG | 0.399134 | 8_4:+1478344 | Msa1306520:CDS |
| ATTGCTCACAATGAAATCTA+TGG | 0.400951 | 8_4:+1478749 | Msa1306520:CDS |
| GGAGAGTCTCTTCCGTTTAA+GGG | 0.401423 | 8_4:-1478356 | None:intergenic |
| CAGATTCTTGATTTGGAAAA+CGG | 0.403375 | 8_4:+1478560 | Msa1306520:CDS |
| CCCTTTGCAGGTTCTCATCC+CGG | 0.417766 | 8_4:+1477990 | Msa1306520:CDS |
| AAGGTCAAAGGATTTGGCTT+TGG | 0.418073 | 8_4:-1478222 | None:intergenic |
| GCTATGGTCAGAGATTATAA+TGG | 0.421356 | 8_4:+1479168 | Msa1306520:CDS |
| TGAAAGTCATAATCTGTTGA+TGG | 0.423697 | 8_4:+1478817 | Msa1306520:CDS |
| GCAAGATTACAACCTTTGAT+TGG | 0.424151 | 8_4:+1478429 | Msa1306520:CDS |
| ATTTGCAATGTGTTGAAGTT+TGG | 0.431202 | 8_4:+1479308 | Msa1306520:CDS |
| GCATAGTTTGAGACCTGTTA+CGG | 0.441604 | 8_4:+1478724 | Msa1306520:CDS |
| TAGGATGTTCTTAACTAGAA+AGG | 0.445860 | 8_4:+1479285 | Msa1306520:CDS |
| CGGAATCGCTGAATCGATAT+CGG | 0.449555 | 8_4:-1478774 | None:intergenic |
| GCCGGAGCTAATGATTTCTC+CGG | 0.449877 | 8_4:+1478533 | Msa1306520:CDS |
| ATGGGGAGGGTGCAAGATAT+GGG | 0.456498 | 8_4:+1479226 | Msa1306520:CDS |
| CTATGGTCAGAGATTATAAT+GGG | 0.475345 | 8_4:+1479169 | Msa1306520:CDS |
| AAACAAACCCTAACCTCAGC+TGG | 0.481824 | 8_4:+1478080 | Msa1306520:CDS |
| ATCATTGAATCCAAATTCTA+CGG | 0.483688 | 8_4:+1478254 | Msa1306520:CDS |
| GGTTCAACCGTTCAAGCGAT+TGG | 0.484879 | 8_4:+1478626 | Msa1306520:CDS |
| TTGTTTAGGTGATAAGAGAA+AGG | 0.487551 | 8_4:+1479060 | Msa1306520:CDS |
| ATCACAAATTTGGCATTTGG+AGG | 0.491735 | 8_4:+1479259 | Msa1306520:CDS |
| TTGGATGCTATGTTTAAAGT+TGG | 0.491875 | 8_4:+1478971 | Msa1306520:CDS |
| AAGCTAACAAACATGTTCTC+AGG | 0.493602 | 8_4:-1478656 | None:intergenic |
| CAAGAAGAATTTGATGGGGA+GGG | 0.495473 | 8_4:+1479213 | Msa1306520:CDS |
| TTGAAAGGTTCAAATTGAGA+AGG | 0.496364 | 8_4:-1478311 | None:intergenic |
| AGGTTATGGGATGTTCGCTC+TGG | 0.496629 | 8_4:+1478884 | Msa1306520:CDS |
| CCTTTGATTGGTCACTTCGC+CGG | 0.499137 | 8_4:+1478441 | Msa1306520:CDS |
| TGAAAGGTTCAAATTGAGAA+GGG | 0.502836 | 8_4:-1478310 | None:intergenic |
| GGGGTGGTTGCAACGGTGGA+AGG | 0.505309 | 8_4:-1478377 | None:intergenic |
| CTCCTCTCTCTCCTCCGCAC+CGG | 0.507223 | 8_4:+1478188 | Msa1306520:CDS |
| ATTTGGCATTTGGAGGAAGT+AGG | 0.517181 | 8_4:+1479266 | Msa1306520:CDS |
| ATTCAATGATAAGATCTTGA+AGG | 0.524910 | 8_4:-1478241 | None:intergenic |
| TACCGGTGCGGAGGAGAGAG+AGG | 0.527787 | 8_4:-1478190 | None:intergenic |
| ACCGTAAGGGGTGGTTGCAA+CGG | 0.528739 | 8_4:-1478384 | None:intergenic |
| CCCGGAGAAATCATTAGCTC+CGG | 0.530387 | 8_4:-1478534 | None:intergenic |
| GGAGGAGAGAGAAAATTTCA+GGG | 0.531374 | 8_4:-1478169 | None:intergenic |
| GATAAGATCTTGAAGGTCAA+AGG | 0.537751 | 8_4:-1478234 | None:intergenic |
| GAAAGGTGTGTAGGGTGAAG+AGG | 0.538108 | 8_4:-1478135 | None:intergenic |
| ACCGTTGCAACCACCCCTTA+CGG | 0.539975 | 8_4:+1478383 | Msa1306520:CDS |
| TTGCACTAAGGGTGGTGATG+TGG | 0.542476 | 8_4:+1479144 | Msa1306520:CDS |
| TCAAGAAGAATTTGATGGGG+AGG | 0.543104 | 8_4:+1479212 | Msa1306520:CDS |
| TGCTGCCGTGTGCGACGTGG+AGG | 0.546307 | 8_4:-1478409 | None:intergenic |
| CCGGAGCTAATGATTTCTCC+GGG | 0.550287 | 8_4:+1478534 | Msa1306520:CDS |
| GTCTGATCTGAAAACACCAC+CGG | 0.555052 | 8_4:-1478009 | None:intergenic |
| GACGTGGAGGGAACCGTAAG+GGG | 0.556034 | 8_4:-1478396 | None:intergenic |
| TCTGTCGATGAAAGGTGTGT+AGG | 0.558071 | 8_4:-1478144 | None:intergenic |
| TCAAAGGATTTGGCTTTGGA+AGG | 0.559147 | 8_4:-1478218 | None:intergenic |
| AGTTTGGCAGAGTTCTTCTA+GGG | 0.559490 | 8_4:+1479324 | Msa1306520:CDS |
| CGACGTGGAGGGAACCGTAA+GGG | 0.559572 | 8_4:-1478397 | None:intergenic |
| CTGTCGATGAAAGGTGTGTA+GGG | 0.561965 | 8_4:-1478143 | None:intergenic |
| CCGGCGAAGTGACCAATCAA+AGG | 0.568312 | 8_4:-1478441 | None:intergenic |
| GCGACGTGGAGGGAACCGTA+AGG | 0.579972 | 8_4:-1478398 | None:intergenic |
| TCAGGGTCTCTGTCGATGAA+AGG | 0.581587 | 8_4:-1478152 | None:intergenic |
| GAAATCATTAGCTCCGGCGG+CGG | 0.582033 | 8_4:-1478528 | None:intergenic |
| GGTTGCAAAATTGAAACACA+AGG | 0.582683 | 8_4:+1479109 | Msa1306520:CDS |
| TGAAGAACCAATCGCTTGAA+CGG | 0.585234 | 8_4:-1478633 | None:intergenic |
| CAAATCAAGAATCTGTAACC+CGG | 0.585490 | 8_4:-1478552 | None:intergenic |
| AACATAGTCACAATCGACGT+TGG | 0.585850 | 8_4:+1478035 | Msa1306520:CDS |
| GCTCCGGCGGCGGCTAACGA+CGG | 0.587441 | 8_4:-1478518 | None:intergenic |
| CCGGGATGAGAACCTGCAAA+GGG | 0.593697 | 8_4:-1477990 | None:intergenic |
| TTTGGAAAACGGTTACGTGA+AGG | 0.595270 | 8_4:+1478571 | Msa1306520:CDS |
| CGGTGCGGAGGAGAGAGAGG+AGG | 0.605383 | 8_4:-1478187 | None:intergenic |
| ATAGTCACAATCGACGTTGG+AGG | 0.605832 | 8_4:+1478038 | Msa1306520:CDS |
| GTTGCAAAATTGAAACACAA+GGG | 0.608708 | 8_4:+1479110 | Msa1306520:CDS |
| ACCGGGATGAGAACCTGCAA+AGG | 0.610342 | 8_4:-1477991 | None:intergenic |
| GCTGCCGTGTGCGACGTGGA+GGG | 0.616967 | 8_4:-1478408 | None:intergenic |
| TTCCGGCAACGAAACTGCAG+TGG | 0.624446 | 8_4:+1478792 | Msa1306520:CDS |
| GTAAGGGGTGGTTGCAACGG+TGG | 0.625552 | 8_4:-1478381 | None:intergenic |
| AACACCAGAAGGACCACTGT+GGG | 0.627063 | 8_4:-1478849 | None:intergenic |
| AAGGAAGATTACCGGTGCGG+AGG | 0.628049 | 8_4:-1478199 | None:intergenic |
| AGGGTGGTGATGTGGAGCTA+TGG | 0.628784 | 8_4:+1479152 | Msa1306520:CDS |
| GGAGAAATCATTAGCTCCGG+CGG | 0.638372 | 8_4:-1478531 | None:intergenic |
| TCTTGCTGCCGTGTGCGACG+TGG | 0.646818 | 8_4:-1478412 | None:intergenic |
| ATGGCTTCTGGGTCCCACAG+TGG | 0.650573 | 8_4:+1478836 | Msa1306520:CDS |
| GTGGAGGGAACCGTAAGGGG+TGG | 0.652569 | 8_4:-1478393 | None:intergenic |
| GGATGAGAACCTGCAAAGGG+TGG | 0.660246 | 8_4:-1477987 | None:intergenic |
| TGGAAGGAAGATTACCGGTG+CGG | 0.667763 | 8_4:-1478202 | None:intergenic |
| TTTGCAGGTTCTCATCCCGG+TGG | 0.693634 | 8_4:+1477993 | Msa1306520:CDS |
| ACATTACCAGAAACACCAGA+AGG | 0.701677 | 8_4:-1478860 | None:intergenic |
| GGGAGGGTGCAAGATATGGG+AGG | 0.711495 | 8_4:+1479229 | Msa1306520:CDS |
| TCTGATCTGAAAACACCACC+GGG | 0.715720 | 8_4:-1478008 | None:intergenic |
| AAACACCAGAAGGACCACTG+TGG | 0.737767 | 8_4:-1478850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATAAACAACAATAGAAT+TGG | - | chr8_4:1478702-1478721 | None:intergenic | 20.0% |
| !!! | ATTTTCAAGAAGAATTTGAT+GGG | + | chr8_4:1479208-1479227 | Msa1306520:CDS | 20.0% |
| !! | ATCATAAACAACAATAGAAT+TGG | - | chr8_4:1478702-1478721 | None:intergenic | 20.0% |
| !!! | ATTTTCAAGAAGAATTTGAT+GGG | + | chr8_4:1479208-1479227 | Msa1306520:CDS | 20.0% |
| !!! | GTTTTGTTGTTTGAAACAAT+TGG | - | chr8_4:1478064-1478083 | None:intergenic | 25.0% |
| ! | ATTCAATGATAAGATCTTGA+AGG | - | chr8_4:1478244-1478263 | None:intergenic | 25.0% |
| ! | ATCATTGAATCCAAATTCTA+CGG | + | chr8_4:1478254-1478273 | Msa1306520:CDS | 25.0% |
| !!! | ATAAGAGAAAGGTTTTGAAT+GGG | + | chr8_4:1479071-1479090 | Msa1306520:CDS | 25.0% |
| !! | TTTTGAATGGGAAAAAAGAA+GGG | + | chr8_4:1479083-1479102 | Msa1306520:CDS | 25.0% |
| !!! | AATCAAGTTTTTTGCACTAA+GGG | + | chr8_4:1479133-1479152 | Msa1306520:CDS | 25.0% |
| !!! | GATTTTCAAGAAGAATTTGA+TGG | + | chr8_4:1479207-1479226 | Msa1306520:CDS | 25.0% |
| !!! | TTTTCAAGAAGAATTTGATG+GGG | + | chr8_4:1479209-1479228 | Msa1306520:CDS | 25.0% |
| !!! | GTTTTGTTGTTTGAAACAAT+TGG | - | chr8_4:1478064-1478083 | None:intergenic | 25.0% |
| ! | ATTCAATGATAAGATCTTGA+AGG | - | chr8_4:1478244-1478263 | None:intergenic | 25.0% |
| ! | ATCATTGAATCCAAATTCTA+CGG | + | chr8_4:1478254-1478273 | Msa1306520:CDS | 25.0% |
| !!! | ATAAGAGAAAGGTTTTGAAT+GGG | + | chr8_4:1479071-1479090 | Msa1306520:CDS | 25.0% |
| !! | TTTTGAATGGGAAAAAAGAA+GGG | + | chr8_4:1479083-1479102 | Msa1306520:CDS | 25.0% |
| !!! | AATCAAGTTTTTTGCACTAA+GGG | + | chr8_4:1479133-1479152 | Msa1306520:CDS | 25.0% |
| !!! | GATTTTCAAGAAGAATTTGA+TGG | + | chr8_4:1479207-1479226 | Msa1306520:CDS | 25.0% |
| !!! | TTTTCAAGAAGAATTTGATG+GGG | + | chr8_4:1479209-1479228 | Msa1306520:CDS | 25.0% |
| ! | ATTGTTGAGAAGAAGGTTTT+TGG | - | chr8_4:1478107-1478126 | None:intergenic | 30.0% |
| TGAAAGGTTCAAATTGAGAA+GGG | - | chr8_4:1478313-1478332 | None:intergenic | 30.0% | |
| TTGAAAGGTTCAAATTGAGA+AGG | - | chr8_4:1478314-1478333 | None:intergenic | 30.0% | |
| !!! | AGTGAGTTTTGAAGATTGAA+AGG | - | chr8_4:1478329-1478348 | None:intergenic | 30.0% |
| TCACTTCAATTACCCTTAAA+CGG | + | chr8_4:1478344-1478363 | Msa1306520:CDS | 30.0% | |
| AACAATTCTAACGCACTTTA+CGG | + | chr8_4:1478469-1478488 | Msa1306520:CDS | 30.0% | |
| !! | CAGATTCTTGATTTGGAAAA+CGG | + | chr8_4:1478560-1478579 | Msa1306520:CDS | 30.0% |
| ACGTGAAGGATACATTAAAT+TGG | + | chr8_4:1478585-1478604 | Msa1306520:CDS | 30.0% | |
| CGTGAAGGATACATTAAATT+GGG | + | chr8_4:1478586-1478605 | Msa1306520:CDS | 30.0% | |
| ATTGCTCACAATGAAATCTA+TGG | + | chr8_4:1478749-1478768 | Msa1306520:CDS | 30.0% | |
| TGAAAGTCATAATCTGTTGA+TGG | + | chr8_4:1478817-1478836 | Msa1306520:CDS | 30.0% | |
| ! | TTTCTGGTAATGTTAGGTTA+TGG | + | chr8_4:1478870-1478889 | Msa1306520:CDS | 30.0% |
| ! | TTCTGGTAATGTTAGGTTAT+GGG | + | chr8_4:1478871-1478890 | Msa1306520:CDS | 30.0% |
| ! | TTGGATGCTATGTTTAAAGT+TGG | + | chr8_4:1478971-1478990 | Msa1306520:CDS | 30.0% |
| !! | TTTAAAGTTGGTGTGAATTC+TGG | + | chr8_4:1478983-1479002 | Msa1306520:CDS | 30.0% |
| ! | AAAAATGCATGGGTTTGTTT+AGG | + | chr8_4:1479046-1479065 | Msa1306520:CDS | 30.0% |
| TTGTTTAGGTGATAAGAGAA+AGG | + | chr8_4:1479060-1479079 | Msa1306520:CDS | 30.0% | |
| !!! | GATAAGAGAAAGGTTTTGAA+TGG | + | chr8_4:1479070-1479089 | Msa1306520:CDS | 30.0% |
| !! | GTTTTGAATGGGAAAAAAGA+AGG | + | chr8_4:1479082-1479101 | Msa1306520:CDS | 30.0% |
| GTTGCAAAATTGAAACACAA+GGG | + | chr8_4:1479110-1479129 | Msa1306520:CDS | 30.0% | |
| !!! | GAATCAAGTTTTTTGCACTA+AGG | + | chr8_4:1479132-1479151 | Msa1306520:CDS | 30.0% |
| CTATGGTCAGAGATTATAAT+GGG | + | chr8_4:1479169-1479188 | Msa1306520:CDS | 30.0% | |
| !! | TAATGGGTTCTTCTAATAAC+AGG | + | chr8_4:1479185-1479204 | Msa1306520:CDS | 30.0% |
| AAGATCACAAATTTGGCATT+TGG | + | chr8_4:1479256-1479275 | Msa1306520:CDS | 30.0% | |
| TAGGATGTTCTTAACTAGAA+AGG | + | chr8_4:1479285-1479304 | Msa1306520:CDS | 30.0% | |
| ATTTGCAATGTGTTGAAGTT+TGG | + | chr8_4:1479308-1479327 | Msa1306520:CDS | 30.0% | |
| ! | ATTGTTGAGAAGAAGGTTTT+TGG | - | chr8_4:1478107-1478126 | None:intergenic | 30.0% |
| TGAAAGGTTCAAATTGAGAA+GGG | - | chr8_4:1478313-1478332 | None:intergenic | 30.0% | |
| TTGAAAGGTTCAAATTGAGA+AGG | - | chr8_4:1478314-1478333 | None:intergenic | 30.0% | |
| !!! | AGTGAGTTTTGAAGATTGAA+AGG | - | chr8_4:1478329-1478348 | None:intergenic | 30.0% |
| TCACTTCAATTACCCTTAAA+CGG | + | chr8_4:1478344-1478363 | Msa1306520:CDS | 30.0% | |
| AACAATTCTAACGCACTTTA+CGG | + | chr8_4:1478469-1478488 | Msa1306520:CDS | 30.0% | |
| !! | CAGATTCTTGATTTGGAAAA+CGG | + | chr8_4:1478560-1478579 | Msa1306520:CDS | 30.0% |
| ACGTGAAGGATACATTAAAT+TGG | + | chr8_4:1478585-1478604 | Msa1306520:CDS | 30.0% | |
| CGTGAAGGATACATTAAATT+GGG | + | chr8_4:1478586-1478605 | Msa1306520:CDS | 30.0% | |
| ATTGCTCACAATGAAATCTA+TGG | + | chr8_4:1478749-1478768 | Msa1306520:CDS | 30.0% | |
| TGAAAGTCATAATCTGTTGA+TGG | + | chr8_4:1478817-1478836 | Msa1306520:CDS | 30.0% | |
| ! | TTTCTGGTAATGTTAGGTTA+TGG | + | chr8_4:1478870-1478889 | Msa1306520:CDS | 30.0% |
| ! | TTCTGGTAATGTTAGGTTAT+GGG | + | chr8_4:1478871-1478890 | Msa1306520:CDS | 30.0% |
| ! | TTGGATGCTATGTTTAAAGT+TGG | + | chr8_4:1478971-1478990 | Msa1306520:CDS | 30.0% |
| !! | TTTAAAGTTGGTGTGAATTC+TGG | + | chr8_4:1478983-1479002 | Msa1306520:CDS | 30.0% |
| ! | AAAAATGCATGGGTTTGTTT+AGG | + | chr8_4:1479046-1479065 | Msa1306520:CDS | 30.0% |
| TTGTTTAGGTGATAAGAGAA+AGG | + | chr8_4:1479060-1479079 | Msa1306520:CDS | 30.0% | |
| !!! | GATAAGAGAAAGGTTTTGAA+TGG | + | chr8_4:1479070-1479089 | Msa1306520:CDS | 30.0% |
| !! | GTTTTGAATGGGAAAAAAGA+AGG | + | chr8_4:1479082-1479101 | Msa1306520:CDS | 30.0% |
| GTTGCAAAATTGAAACACAA+GGG | + | chr8_4:1479110-1479129 | Msa1306520:CDS | 30.0% | |
| !!! | GAATCAAGTTTTTTGCACTA+AGG | + | chr8_4:1479132-1479151 | Msa1306520:CDS | 30.0% |
| CTATGGTCAGAGATTATAAT+GGG | + | chr8_4:1479169-1479188 | Msa1306520:CDS | 30.0% | |
| !! | TAATGGGTTCTTCTAATAAC+AGG | + | chr8_4:1479185-1479204 | Msa1306520:CDS | 30.0% |
| AAGATCACAAATTTGGCATT+TGG | + | chr8_4:1479256-1479275 | Msa1306520:CDS | 30.0% | |
| TAGGATGTTCTTAACTAGAA+AGG | + | chr8_4:1479285-1479304 | Msa1306520:CDS | 30.0% | |
| ATTTGCAATGTGTTGAAGTT+TGG | + | chr8_4:1479308-1479327 | Msa1306520:CDS | 30.0% | |
| TTGTGAGATTGTTGAGAAGA+AGG | - | chr8_4:1478114-1478133 | None:intergenic | 35.0% | |
| ATCTTGAAGGTCAAAGGATT+TGG | - | chr8_4:1478231-1478250 | None:intergenic | 35.0% | |
| GATAAGATCTTGAAGGTCAA+AGG | - | chr8_4:1478237-1478256 | None:intergenic | 35.0% | |
| ! | ATTTTCGATGCCGTAGAATT+TGG | - | chr8_4:1478267-1478286 | None:intergenic | 35.0% |
| GCAAGATTACAACCTTTGAT+TGG | + | chr8_4:1478429-1478448 | Msa1306520:CDS | 35.0% | |
| !! | GCGTTAGAATTGTTGATTTC+CGG | - | chr8_4:1478463-1478482 | None:intergenic | 35.0% |
| CAAATCAAGAATCTGTAACC+CGG | - | chr8_4:1478555-1478574 | None:intergenic | 35.0% | |
| AAGCTAACAAACATGTTCTC+AGG | - | chr8_4:1478659-1478678 | None:intergenic | 35.0% | |
| !! | ATAATCTGTTGATGGCTTCT+GGG | + | chr8_4:1478825-1478844 | Msa1306520:CDS | 35.0% |
| TGTAGCAGTTTCTGATTCTT+TGG | + | chr8_4:1478952-1478971 | Msa1306520:CDS | 35.0% | |
| !! | TTCTGGTGAAGCGTTTTATA+TGG | + | chr8_4:1479000-1479019 | Msa1306520:CDS | 35.0% |
| !! | TGAGTTCTGAGAAAAATGCA+TGG | + | chr8_4:1479035-1479054 | Msa1306520:CDS | 35.0% |
| !! | GAGTTCTGAGAAAAATGCAT+GGG | + | chr8_4:1479036-1479055 | Msa1306520:CDS | 35.0% |
| AATGGGAAAAAAGAAGGGTT+TGG | + | chr8_4:1479088-1479107 | Msa1306520:CDS | 35.0% | |
| GGTTGCAAAATTGAAACACA+AGG | + | chr8_4:1479109-1479128 | Msa1306520:CDS | 35.0% | |
| GCTATGGTCAGAGATTATAA+TGG | + | chr8_4:1479168-1479187 | Msa1306520:CDS | 35.0% | |
| AGGTGCTAAGATCACAAATT+TGG | + | chr8_4:1479249-1479268 | Msa1306520:CDS | 35.0% | |
| ATCACAAATTTGGCATTTGG+AGG | + | chr8_4:1479259-1479278 | Msa1306520:CDS | 35.0% | |
| TTGTGAGATTGTTGAGAAGA+AGG | - | chr8_4:1478114-1478133 | None:intergenic | 35.0% | |
| ATCTTGAAGGTCAAAGGATT+TGG | - | chr8_4:1478231-1478250 | None:intergenic | 35.0% | |
| GATAAGATCTTGAAGGTCAA+AGG | - | chr8_4:1478237-1478256 | None:intergenic | 35.0% | |
| ! | ATTTTCGATGCCGTAGAATT+TGG | - | chr8_4:1478267-1478286 | None:intergenic | 35.0% |
| GCAAGATTACAACCTTTGAT+TGG | + | chr8_4:1478429-1478448 | Msa1306520:CDS | 35.0% | |
| !! | GCGTTAGAATTGTTGATTTC+CGG | - | chr8_4:1478463-1478482 | None:intergenic | 35.0% |
| CAAATCAAGAATCTGTAACC+CGG | - | chr8_4:1478555-1478574 | None:intergenic | 35.0% | |
| AAGCTAACAAACATGTTCTC+AGG | - | chr8_4:1478659-1478678 | None:intergenic | 35.0% | |
| !! | ATAATCTGTTGATGGCTTCT+GGG | + | chr8_4:1478825-1478844 | Msa1306520:CDS | 35.0% |
| TGTAGCAGTTTCTGATTCTT+TGG | + | chr8_4:1478952-1478971 | Msa1306520:CDS | 35.0% | |
| !! | TTCTGGTGAAGCGTTTTATA+TGG | + | chr8_4:1479000-1479019 | Msa1306520:CDS | 35.0% |
| !! | TGAGTTCTGAGAAAAATGCA+TGG | + | chr8_4:1479035-1479054 | Msa1306520:CDS | 35.0% |
| !! | GAGTTCTGAGAAAAATGCAT+GGG | + | chr8_4:1479036-1479055 | Msa1306520:CDS | 35.0% |
| AATGGGAAAAAAGAAGGGTT+TGG | + | chr8_4:1479088-1479107 | Msa1306520:CDS | 35.0% | |
| GGTTGCAAAATTGAAACACA+AGG | + | chr8_4:1479109-1479128 | Msa1306520:CDS | 35.0% | |
| GCTATGGTCAGAGATTATAA+TGG | + | chr8_4:1479168-1479187 | Msa1306520:CDS | 35.0% | |
| AGGTGCTAAGATCACAAATT+TGG | + | chr8_4:1479249-1479268 | Msa1306520:CDS | 35.0% | |
| ATCACAAATTTGGCATTTGG+AGG | + | chr8_4:1479259-1479278 | Msa1306520:CDS | 35.0% | |
| AACATAGTCACAATCGACGT+TGG | + | chr8_4:1478035-1478054 | Msa1306520:CDS | 40.0% | |
| GGAGGAGAGAGAAAATTTCA+GGG | - | chr8_4:1478172-1478191 | None:intergenic | 40.0% | |
| AGGAGGAGAGAGAAAATTTC+AGG | - | chr8_4:1478173-1478192 | None:intergenic | 40.0% | |
| !! | TCAAAGGATTTGGCTTTGGA+AGG | - | chr8_4:1478221-1478240 | None:intergenic | 40.0% |
| ! | AAGGTCAAAGGATTTGGCTT+TGG | - | chr8_4:1478225-1478244 | None:intergenic | 40.0% |
| CGGGTTACAGATTCTTGATT+TGG | + | chr8_4:1478553-1478572 | Msa1306520:CDS | 40.0% | |
| TTTGGAAAACGGTTACGTGA+AGG | + | chr8_4:1478571-1478590 | Msa1306520:CDS | 40.0% | |
| TGGGAAAACGTAACGAAATC+TGG | + | chr8_4:1478605-1478624 | Msa1306520:CDS | 40.0% | |
| TGAAGAACCAATCGCTTGAA+CGG | - | chr8_4:1478636-1478655 | None:intergenic | 40.0% | |
| ! | GCATAGTTTGAGACCTGTTA+CGG | + | chr8_4:1478724-1478743 | Msa1306520:CDS | 40.0% |
| !! | CATAATCTGTTGATGGCTTC+TGG | + | chr8_4:1478824-1478843 | Msa1306520:CDS | 40.0% |
| ACATTACCAGAAACACCAGA+AGG | - | chr8_4:1478863-1478882 | None:intergenic | 40.0% | |
| !! | CTGGTGTTTCTGGTAATGTT+AGG | + | chr8_4:1478864-1478883 | Msa1306520:CDS | 40.0% |
| !!! | CAAGTTTTTTGCACTAAGGG+TGG | + | chr8_4:1479136-1479155 | Msa1306520:CDS | 40.0% |
| TCAAGAAGAATTTGATGGGG+AGG | + | chr8_4:1479212-1479231 | Msa1306520:CDS | 40.0% | |
| CAAGAAGAATTTGATGGGGA+GGG | + | chr8_4:1479213-1479232 | Msa1306520:CDS | 40.0% | |
| ATTTGGCATTTGGAGGAAGT+AGG | + | chr8_4:1479266-1479285 | Msa1306520:CDS | 40.0% | |
| AAGTTTGGCAGAGTTCTTCT+AGG | + | chr8_4:1479323-1479342 | Msa1306520:CDS | 40.0% | |
| AGTTTGGCAGAGTTCTTCTA+GGG | + | chr8_4:1479324-1479343 | Msa1306520:CDS | 40.0% | |
| AACATAGTCACAATCGACGT+TGG | + | chr8_4:1478035-1478054 | Msa1306520:CDS | 40.0% | |
| GGAGGAGAGAGAAAATTTCA+GGG | - | chr8_4:1478172-1478191 | None:intergenic | 40.0% | |
| AGGAGGAGAGAGAAAATTTC+AGG | - | chr8_4:1478173-1478192 | None:intergenic | 40.0% | |
| !! | TCAAAGGATTTGGCTTTGGA+AGG | - | chr8_4:1478221-1478240 | None:intergenic | 40.0% |
| ! | AAGGTCAAAGGATTTGGCTT+TGG | - | chr8_4:1478225-1478244 | None:intergenic | 40.0% |
| CGGGTTACAGATTCTTGATT+TGG | + | chr8_4:1478553-1478572 | Msa1306520:CDS | 40.0% | |
| TTTGGAAAACGGTTACGTGA+AGG | + | chr8_4:1478571-1478590 | Msa1306520:CDS | 40.0% | |
| TGGGAAAACGTAACGAAATC+TGG | + | chr8_4:1478605-1478624 | Msa1306520:CDS | 40.0% | |
| TGAAGAACCAATCGCTTGAA+CGG | - | chr8_4:1478636-1478655 | None:intergenic | 40.0% | |
| ! | GCATAGTTTGAGACCTGTTA+CGG | + | chr8_4:1478724-1478743 | Msa1306520:CDS | 40.0% |
| !! | CATAATCTGTTGATGGCTTC+TGG | + | chr8_4:1478824-1478843 | Msa1306520:CDS | 40.0% |
| ACATTACCAGAAACACCAGA+AGG | - | chr8_4:1478863-1478882 | None:intergenic | 40.0% | |
| !! | CTGGTGTTTCTGGTAATGTT+AGG | + | chr8_4:1478864-1478883 | Msa1306520:CDS | 40.0% |
| !!! | CAAGTTTTTTGCACTAAGGG+TGG | + | chr8_4:1479136-1479155 | Msa1306520:CDS | 40.0% |
| TCAAGAAGAATTTGATGGGG+AGG | + | chr8_4:1479212-1479231 | Msa1306520:CDS | 40.0% | |
| CAAGAAGAATTTGATGGGGA+GGG | + | chr8_4:1479213-1479232 | Msa1306520:CDS | 40.0% | |
| ATTTGGCATTTGGAGGAAGT+AGG | + | chr8_4:1479266-1479285 | Msa1306520:CDS | 40.0% | |
| AAGTTTGGCAGAGTTCTTCT+AGG | + | chr8_4:1479323-1479342 | Msa1306520:CDS | 40.0% | |
| AGTTTGGCAGAGTTCTTCTA+GGG | + | chr8_4:1479324-1479343 | Msa1306520:CDS | 40.0% | |
| TCTGATCTGAAAACACCACC+GGG | - | chr8_4:1478011-1478030 | None:intergenic | 45.0% | |
| GTCTGATCTGAAAACACCAC+CGG | - | chr8_4:1478012-1478031 | None:intergenic | 45.0% | |
| ATAGTCACAATCGACGTTGG+AGG | + | chr8_4:1478038-1478057 | Msa1306520:CDS | 45.0% | |
| AAACAAACCCTAACCTCAGC+TGG | + | chr8_4:1478080-1478099 | Msa1306520:CDS | 45.0% | |
| ! | TTTTGGTCCAGCTGAGGTTA+GGG | - | chr8_4:1478090-1478109 | None:intergenic | 45.0% |
| !! | TTTTTGGTCCAGCTGAGGTT+AGG | - | chr8_4:1478091-1478110 | None:intergenic | 45.0% |
| ! | CTGTCGATGAAAGGTGTGTA+GGG | - | chr8_4:1478146-1478165 | None:intergenic | 45.0% |
| ! | TCTGTCGATGAAAGGTGTGT+AGG | - | chr8_4:1478147-1478166 | None:intergenic | 45.0% |
| !! | GGCTTTGGAAGGAAGATTAC+CGG | - | chr8_4:1478210-1478229 | None:intergenic | 45.0% |
| GGAGAGTCTCTTCCGTTTAA+GGG | - | chr8_4:1478359-1478378 | None:intergenic | 45.0% | |
| AGGAGAGTCTCTTCCGTTTA+AGG | - | chr8_4:1478360-1478379 | None:intergenic | 45.0% | |
| TTGTGAGCAATCTCCGTAAC+AGG | - | chr8_4:1478740-1478759 | None:intergenic | 45.0% | |
| CGGAATCGCTGAATCGATAT+CGG | - | chr8_4:1478777-1478796 | None:intergenic | 45.0% | |
| !! | CGATATCGATTCAGCGATTC+CGG | + | chr8_4:1478775-1478794 | Msa1306520:CDS | 45.0% |
| TCTGATCTGAAAACACCACC+GGG | - | chr8_4:1478011-1478030 | None:intergenic | 45.0% | |
| GTCTGATCTGAAAACACCAC+CGG | - | chr8_4:1478012-1478031 | None:intergenic | 45.0% | |
| ATAGTCACAATCGACGTTGG+AGG | + | chr8_4:1478038-1478057 | Msa1306520:CDS | 45.0% | |
| AAACAAACCCTAACCTCAGC+TGG | + | chr8_4:1478080-1478099 | Msa1306520:CDS | 45.0% | |
| ! | TTTTGGTCCAGCTGAGGTTA+GGG | - | chr8_4:1478090-1478109 | None:intergenic | 45.0% |
| !! | TTTTTGGTCCAGCTGAGGTT+AGG | - | chr8_4:1478091-1478110 | None:intergenic | 45.0% |
| ! | CTGTCGATGAAAGGTGTGTA+GGG | - | chr8_4:1478146-1478165 | None:intergenic | 45.0% |
| ! | TCTGTCGATGAAAGGTGTGT+AGG | - | chr8_4:1478147-1478166 | None:intergenic | 45.0% |
| !! | GGCTTTGGAAGGAAGATTAC+CGG | - | chr8_4:1478210-1478229 | None:intergenic | 45.0% |
| GGAGAGTCTCTTCCGTTTAA+GGG | - | chr8_4:1478359-1478378 | None:intergenic | 45.0% | |
| AGGAGAGTCTCTTCCGTTTA+AGG | - | chr8_4:1478360-1478379 | None:intergenic | 45.0% | |
| TTGTGAGCAATCTCCGTAAC+AGG | - | chr8_4:1478740-1478759 | None:intergenic | 45.0% | |
| CGGAATCGCTGAATCGATAT+CGG | - | chr8_4:1478777-1478796 | None:intergenic | 45.0% | |
| !! | CGATATCGATTCAGCGATTC+CGG | + | chr8_4:1478775-1478794 | Msa1306520:CDS | 45.0% |
| !!! | GAAGGTTTTTGGTCCAGCTG+AGG | - | chr8_4:1478096-1478115 | None:intergenic | 50.0% |
| ! | GAAAGGTGTGTAGGGTGAAG+AGG | - | chr8_4:1478138-1478157 | None:intergenic | 50.0% |
| TCAGGGTCTCTGTCGATGAA+AGG | - | chr8_4:1478155-1478174 | None:intergenic | 50.0% | |
| TGGAAGGAAGATTACCGGTG+CGG | - | chr8_4:1478205-1478224 | None:intergenic | 50.0% | |
| ! | CCTTTGATTGGTCACTTCGC+CGG | + | chr8_4:1478441-1478460 | Msa1306520:CDS | 50.0% |
| GGAGAAATCATTAGCTCCGG+CGG | - | chr8_4:1478534-1478553 | None:intergenic | 50.0% | |
| GCCGGAGCTAATGATTTCTC+CGG | + | chr8_4:1478533-1478552 | Msa1306520:CDS | 50.0% | |
| CCCGGAGAAATCATTAGCTC+CGG | - | chr8_4:1478537-1478556 | None:intergenic | 50.0% | |
| CCGGAGCTAATGATTTCTCC+GGG | + | chr8_4:1478534-1478553 | Msa1306520:CDS | 50.0% | |
| GGTTCAACCGTTCAAGCGAT+TGG | + | chr8_4:1478626-1478645 | Msa1306520:CDS | 50.0% | |
| ATCCACTGCAGTTTCGTTGC+CGG | - | chr8_4:1478797-1478816 | None:intergenic | 50.0% | |
| AACACCAGAAGGACCACTGT+GGG | - | chr8_4:1478852-1478871 | None:intergenic | 50.0% | |
| AAACACCAGAAGGACCACTG+TGG | - | chr8_4:1478853-1478872 | None:intergenic | 50.0% | |
| AGTGGTCCTTCTGGTGTTTC+TGG | + | chr8_4:1478854-1478873 | Msa1306520:CDS | 50.0% | |
| AGGTTATGGGATGTTCGCTC+TGG | + | chr8_4:1478884-1478903 | Msa1306520:CDS | 50.0% | |
| TTCGCTCTGGCAACGTTGTT+TGG | + | chr8_4:1478897-1478916 | Msa1306520:CDS | 50.0% | |
| TCGCTCTGGCAACGTTGTTT+GGG | + | chr8_4:1478898-1478917 | Msa1306520:CDS | 50.0% | |
| ! | TTGCACTAAGGGTGGTGATG+TGG | + | chr8_4:1479144-1479163 | Msa1306520:CDS | 50.0% |
| ! | ATGGGGAGGGTGCAAGATAT+GGG | + | chr8_4:1479226-1479245 | Msa1306520:CDS | 50.0% |
| !!! | GAAGGTTTTTGGTCCAGCTG+AGG | - | chr8_4:1478096-1478115 | None:intergenic | 50.0% |
| ! | GAAAGGTGTGTAGGGTGAAG+AGG | - | chr8_4:1478138-1478157 | None:intergenic | 50.0% |
| TCAGGGTCTCTGTCGATGAA+AGG | - | chr8_4:1478155-1478174 | None:intergenic | 50.0% | |
| TGGAAGGAAGATTACCGGTG+CGG | - | chr8_4:1478205-1478224 | None:intergenic | 50.0% | |
| ! | CCTTTGATTGGTCACTTCGC+CGG | + | chr8_4:1478441-1478460 | Msa1306520:CDS | 50.0% |
| GGAGAAATCATTAGCTCCGG+CGG | - | chr8_4:1478534-1478553 | None:intergenic | 50.0% | |
| GCCGGAGCTAATGATTTCTC+CGG | + | chr8_4:1478533-1478552 | Msa1306520:CDS | 50.0% | |
| CCCGGAGAAATCATTAGCTC+CGG | - | chr8_4:1478537-1478556 | None:intergenic | 50.0% | |
| CCGGAGCTAATGATTTCTCC+GGG | + | chr8_4:1478534-1478553 | Msa1306520:CDS | 50.0% | |
| GGTTCAACCGTTCAAGCGAT+TGG | + | chr8_4:1478626-1478645 | Msa1306520:CDS | 50.0% | |
| ATCCACTGCAGTTTCGTTGC+CGG | - | chr8_4:1478797-1478816 | None:intergenic | 50.0% | |
| AACACCAGAAGGACCACTGT+GGG | - | chr8_4:1478852-1478871 | None:intergenic | 50.0% | |
| AAACACCAGAAGGACCACTG+TGG | - | chr8_4:1478853-1478872 | None:intergenic | 50.0% | |
| AGTGGTCCTTCTGGTGTTTC+TGG | + | chr8_4:1478854-1478873 | Msa1306520:CDS | 50.0% | |
| AGGTTATGGGATGTTCGCTC+TGG | + | chr8_4:1478884-1478903 | Msa1306520:CDS | 50.0% | |
| TTCGCTCTGGCAACGTTGTT+TGG | + | chr8_4:1478897-1478916 | Msa1306520:CDS | 50.0% | |
| TCGCTCTGGCAACGTTGTTT+GGG | + | chr8_4:1478898-1478917 | Msa1306520:CDS | 50.0% | |
| ! | TTGCACTAAGGGTGGTGATG+TGG | + | chr8_4:1479144-1479163 | Msa1306520:CDS | 50.0% |
| ! | ATGGGGAGGGTGCAAGATAT+GGG | + | chr8_4:1479226-1479245 | Msa1306520:CDS | 50.0% |
| GGATGAGAACCTGCAAAGGG+TGG | - | chr8_4:1477990-1478009 | None:intergenic | 55.0% | |
| CCGGGATGAGAACCTGCAAA+GGG | - | chr8_4:1477993-1478012 | None:intergenic | 55.0% | |
| CCCTTTGCAGGTTCTCATCC+CGG | + | chr8_4:1477990-1478009 | Msa1306520:CDS | 55.0% | |
| ACCGGGATGAGAACCTGCAA+AGG | - | chr8_4:1477994-1478013 | None:intergenic | 55.0% | |
| TTTGCAGGTTCTCATCCCGG+TGG | + | chr8_4:1477993-1478012 | Msa1306520:CDS | 55.0% | |
| AAGGAAGATTACCGGTGCGG+AGG | - | chr8_4:1478202-1478221 | None:intergenic | 55.0% | |
| ACCGTTGCAACCACCCCTTA+CGG | + | chr8_4:1478383-1478402 | Msa1306520:CDS | 55.0% | |
| ACCGTAAGGGGTGGTTGCAA+CGG | - | chr8_4:1478387-1478406 | None:intergenic | 55.0% | |
| CCGGCGAAGTGACCAATCAA+AGG | - | chr8_4:1478444-1478463 | None:intergenic | 55.0% | |
| GAAATCATTAGCTCCGGCGG+CGG | - | chr8_4:1478531-1478550 | None:intergenic | 55.0% | |
| TTCCGGCAACGAAACTGCAG+TGG | + | chr8_4:1478792-1478811 | Msa1306520:CDS | 55.0% | |
| ! | AGGGTGGTGATGTGGAGCTA+TGG | + | chr8_4:1479152-1479171 | Msa1306520:CDS | 55.0% |
| ! | GATGGGGAGGGTGCAAGATA+TGG | + | chr8_4:1479225-1479244 | Msa1306520:CDS | 55.0% |
| GGATGAGAACCTGCAAAGGG+TGG | - | chr8_4:1477990-1478009 | None:intergenic | 55.0% | |
| CCGGGATGAGAACCTGCAAA+GGG | - | chr8_4:1477993-1478012 | None:intergenic | 55.0% | |
| CCCTTTGCAGGTTCTCATCC+CGG | + | chr8_4:1477990-1478009 | Msa1306520:CDS | 55.0% | |
| ACCGGGATGAGAACCTGCAA+AGG | - | chr8_4:1477994-1478013 | None:intergenic | 55.0% | |
| TTTGCAGGTTCTCATCCCGG+TGG | + | chr8_4:1477993-1478012 | Msa1306520:CDS | 55.0% | |
| AAGGAAGATTACCGGTGCGG+AGG | - | chr8_4:1478202-1478221 | None:intergenic | 55.0% | |
| ACCGTTGCAACCACCCCTTA+CGG | + | chr8_4:1478383-1478402 | Msa1306520:CDS | 55.0% | |
| ACCGTAAGGGGTGGTTGCAA+CGG | - | chr8_4:1478387-1478406 | None:intergenic | 55.0% | |
| CCGGCGAAGTGACCAATCAA+AGG | - | chr8_4:1478444-1478463 | None:intergenic | 55.0% | |
| GAAATCATTAGCTCCGGCGG+CGG | - | chr8_4:1478531-1478550 | None:intergenic | 55.0% | |
| TTCCGGCAACGAAACTGCAG+TGG | + | chr8_4:1478792-1478811 | Msa1306520:CDS | 55.0% | |
| ! | AGGGTGGTGATGTGGAGCTA+TGG | + | chr8_4:1479152-1479171 | Msa1306520:CDS | 55.0% |
| ! | GATGGGGAGGGTGCAAGATA+TGG | + | chr8_4:1479225-1479244 | Msa1306520:CDS | 55.0% |
| GTAAGGGGTGGTTGCAACGG+TGG | - | chr8_4:1478384-1478403 | None:intergenic | 60.0% | |
| GACGTGGAGGGAACCGTAAG+GGG | - | chr8_4:1478399-1478418 | None:intergenic | 60.0% | |
| CGACGTGGAGGGAACCGTAA+GGG | - | chr8_4:1478400-1478419 | None:intergenic | 60.0% | |
| ATGGCTTCTGGGTCCCACAG+TGG | + | chr8_4:1478836-1478855 | Msa1306520:CDS | 60.0% | |
| ! | GGGAGGGTGCAAGATATGGG+AGG | + | chr8_4:1479229-1479248 | Msa1306520:CDS | 60.0% |
| GTAAGGGGTGGTTGCAACGG+TGG | - | chr8_4:1478384-1478403 | None:intergenic | 60.0% | |
| GACGTGGAGGGAACCGTAAG+GGG | - | chr8_4:1478399-1478418 | None:intergenic | 60.0% | |
| CGACGTGGAGGGAACCGTAA+GGG | - | chr8_4:1478400-1478419 | None:intergenic | 60.0% | |
| ATGGCTTCTGGGTCCCACAG+TGG | + | chr8_4:1478836-1478855 | Msa1306520:CDS | 60.0% | |
| ! | GGGAGGGTGCAAGATATGGG+AGG | + | chr8_4:1479229-1479248 | Msa1306520:CDS | 60.0% |
| CTCCTCTCTCTCCTCCGCAC+CGG | + | chr8_4:1478188-1478207 | Msa1306520:CDS | 65.0% | |
| TACCGGTGCGGAGGAGAGAG+AGG | - | chr8_4:1478193-1478212 | None:intergenic | 65.0% | |
| GGGGTGGTTGCAACGGTGGA+AGG | - | chr8_4:1478380-1478399 | None:intergenic | 65.0% | |
| GTGGAGGGAACCGTAAGGGG+TGG | - | chr8_4:1478396-1478415 | None:intergenic | 65.0% | |
| GCGACGTGGAGGGAACCGTA+AGG | - | chr8_4:1478401-1478420 | None:intergenic | 65.0% | |
| GGTTCCCTCCACGTCGCACA+CGG | + | chr8_4:1478404-1478423 | Msa1306520:CDS | 65.0% | |
| TCTTGCTGCCGTGTGCGACG+TGG | - | chr8_4:1478415-1478434 | None:intergenic | 65.0% | |
| GGGTCCCACAGTGGTCCTTC+TGG | + | chr8_4:1478845-1478864 | Msa1306520:CDS | 65.0% | |
| CTCCTCTCTCTCCTCCGCAC+CGG | + | chr8_4:1478188-1478207 | Msa1306520:CDS | 65.0% | |
| TACCGGTGCGGAGGAGAGAG+AGG | - | chr8_4:1478193-1478212 | None:intergenic | 65.0% | |
| GGGGTGGTTGCAACGGTGGA+AGG | - | chr8_4:1478380-1478399 | None:intergenic | 65.0% | |
| GTGGAGGGAACCGTAAGGGG+TGG | - | chr8_4:1478396-1478415 | None:intergenic | 65.0% | |
| GCGACGTGGAGGGAACCGTA+AGG | - | chr8_4:1478401-1478420 | None:intergenic | 65.0% | |
| GGTTCCCTCCACGTCGCACA+CGG | + | chr8_4:1478404-1478423 | Msa1306520:CDS | 65.0% | |
| TCTTGCTGCCGTGTGCGACG+TGG | - | chr8_4:1478415-1478434 | None:intergenic | 65.0% | |
| GGGTCCCACAGTGGTCCTTC+TGG | + | chr8_4:1478845-1478864 | Msa1306520:CDS | 65.0% | |
| CGGTGCGGAGGAGAGAGAGG+AGG | - | chr8_4:1478190-1478209 | None:intergenic | 70.0% | |
| GCTGCCGTGTGCGACGTGGA+GGG | - | chr8_4:1478411-1478430 | None:intergenic | 70.0% | |
| TGCTGCCGTGTGCGACGTGG+AGG | - | chr8_4:1478412-1478431 | None:intergenic | 70.0% | |
| CGGTGCGGAGGAGAGAGAGG+AGG | - | chr8_4:1478190-1478209 | None:intergenic | 70.0% | |
| GCTGCCGTGTGCGACGTGGA+GGG | - | chr8_4:1478411-1478430 | None:intergenic | 70.0% | |
| TGCTGCCGTGTGCGACGTGG+AGG | - | chr8_4:1478412-1478431 | None:intergenic | 70.0% | |
| TCGCCGTCGTTAGCCGCCGC+CGG | + | chr8_4:1478515-1478534 | Msa1306520:CDS | 75.0% | |
| GCTCCGGCGGCGGCTAACGA+CGG | - | chr8_4:1478521-1478540 | None:intergenic | 75.0% | |
| TCGCCGTCGTTAGCCGCCGC+CGG | + | chr8_4:1478515-1478534 | Msa1306520:CDS | 75.0% | |
| GCTCCGGCGGCGGCTAACGA+CGG | - | chr8_4:1478521-1478540 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 1477984 | 1479354 | 1477984 | ID=Msa1306520;Name=Msa1306520 |
| chr8_4 | mRNA | 1477984 | 1479354 | 1477984 | ID=Msa1306520-mRNA-1;Parent=Msa1306520;Name=Msa1306520-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|456 |
| chr8_4 | exon | 1477984 | 1479354 | 1477984 | ID=Msa1306520-mRNA-1:exon:299;Parent=Msa1306520-mRNA-1 |
| chr8_4 | CDS | 1477984 | 1479354 | 1477984 | ID=Msa1306520-mRNA-1:cds;Parent=Msa1306520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
