AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1318460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1318460 MtrunA17_Chr8g0349091 97.668 343 7 1 1 342 1 343 0.0 672
Msa1318460 MtrunA17_Chr7g0247431 60.571 350 126 9 1 342 1 346 8.77e-114 333
Msa1318460 MtrunA17_Chr5g0397551 44.928 345 163 9 1 342 1 321 7.51e-76 236
Msa1318460 MtrunA17_Chr8g0386741 44.847 359 173 11 1 342 1 351 4.55e-69 219
Msa1318460 MtrunA17_Chr1g0179461 50.000 214 95 3 89 290 69 282 3.52e-59 194
Msa1318460 MtrunA17_Chr4g0056761 50.235 213 98 3 78 282 61 273 1.29e-51 174
Msa1318460 MtrunA17_Chr7g0245841 47.768 224 107 3 89 310 60 275 1.91e-51 173
Msa1318460 MtrunA17_Chr4g0054661 51.042 192 77 4 89 270 73 257 3.97e-51 173
Msa1318460 MtrunA17_Chr8g0351761 49.758 207 93 3 88 285 70 274 1.02e-47 164
Msa1318460 MtrunA17_Chr1g0188211 43.023 258 115 9 89 319 49 301 1.02e-45 159
Msa1318460 MtrunA17_Chr5g0398621 42.079 202 97 4 87 282 44 231 5.66e-43 149
Msa1318460 MtrunA17_Chr6g0476061 41.038 212 108 5 85 282 47 255 7.72e-36 132
Msa1318460 MtrunA17_Chr1g0165101 39.316 234 109 6 77 290 73 293 1.28e-33 127
Msa1318460 MtrunA17_Chr7g0274821 44.000 200 100 3 86 281 71 262 3.64e-31 120
Msa1318460 MtrunA17_Chr1g0190011 49.612 129 58 3 145 269 97 222 5.99e-30 116
Msa1318460 MtrunA17_Chr4g0027371 49.231 130 63 2 143 269 8 137 7.70e-29 111
Msa1318460 MtrunA17_Chr4g0027351 48.800 125 61 2 143 266 8 130 4.31e-28 106
Msa1318460 MtrunA17_Chr4g0027331 48.387 124 61 2 143 263 8 131 1.82e-27 105
Msa1318460 MtrunA17_Chr4g0027301 41.463 123 69 2 147 266 19 141 3.03e-21 88.6
Msa1318460 MtrunA17_Chr3g0133051 37.333 150 90 2 121 269 71 217 1.43e-20 90.1
Msa1318460 MtrunA17_Chr5g0417581 36.170 141 74 3 144 269 9 148 6.92e-20 86.3
Msa1318460 MtrunA17_Chr6g0476241 36.765 204 105 10 89 287 120 304 2.88e-19 87.0
Msa1318460 MtrunA17_Chr1g0168121 40.411 146 81 3 124 269 42 181 2.81e-17 80.9
Msa1318460 MtrunA17_Chr3g0086021 45.946 111 54 3 166 273 118 225 6.68e-17 80.1
Msa1318460 MtrunA17_Chr5g0400531 42.636 129 59 5 90 209 121 243 4.57e-16 77.0
Msa1318460 MtrunA17_Chr5g0427311 35.714 126 79 2 145 269 71 195 1.88e-15 74.7
Msa1318460 MtrunA17_Chr8g0351651 37.584 149 87 3 121 269 83 225 5.41e-15 74.7
Msa1318460 MtrunA17_Chr5g0398531 36.486 148 88 2 122 269 98 239 6.73e-15 74.7
Msa1318460 MtrunA17_Chr3g0112131 42.373 118 65 2 152 269 104 218 1.49e-14 73.6
Msa1318460 MtrunA17_Chr1g0190051 38.788 165 93 5 124 288 74 230 1.64e-14 73.2
Msa1318460 MtrunA17_Chr5g0443311 31.776 214 134 5 121 328 48 255 2.34e-14 72.0
Msa1318460 MtrunA17_Chr4g0054651 38.400 125 74 1 145 269 94 215 8.33e-12 65.1
Msa1318460 MtrunA17_Chr7g0250031 37.600 125 75 1 145 269 75 196 5.94e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1318460 AT2G45850.1 53.867 362 133 11 1 342 1 348 1.35e-99 298
Msa1318460 AT2G45850.2 53.867 362 133 11 1 342 1 348 1.35e-99 298
Msa1318460 AT3G61310.1 50.824 364 147 12 1 342 1 354 4.81e-85 261
Msa1318460 AT2G45850.3 55.208 288 99 8 1 269 1 277 9.45e-76 234
Msa1318460 AT4G12080.1 44.928 276 116 6 89 339 89 353 9.03e-67 214
Msa1318460 AT2G33620.1 50.787 254 94 10 75 318 82 314 2.20e-65 210
Msa1318460 AT2G33620.4 50.787 254 94 10 75 318 82 314 2.20e-65 210
Msa1318460 AT2G33620.2 50.787 254 94 10 75 318 82 314 2.20e-65 210
Msa1318460 AT2G33620.3 50.787 254 94 10 75 318 82 314 2.20e-65 210
Msa1318460 AT1G63470.1 46.545 275 125 6 89 342 105 378 8.20e-64 207
Msa1318460 AT1G63480.2 39.237 367 192 10 1 342 1 361 1.80e-62 203
Msa1318460 AT1G63480.1 39.237 367 192 10 1 342 1 361 1.80e-62 203
Msa1318460 AT1G63480.5 45.149 268 128 6 89 342 93 355 9.89e-62 201
Msa1318460 AT1G63480.7 45.149 268 128 6 89 342 93 355 9.89e-62 201
Msa1318460 AT1G63480.4 45.149 268 128 6 89 342 93 355 9.89e-62 201
Msa1318460 AT1G63480.3 45.149 268 128 6 89 342 93 355 9.89e-62 201
Msa1318460 AT1G63480.6 45.149 268 128 6 89 342 93 355 9.89e-62 201
Msa1318460 AT4G25320.1 48.571 210 93 3 83 277 80 289 1.12e-56 189
Msa1318460 AT4G22770.2 42.697 267 123 7 87 334 70 325 5.13e-53 178
Msa1318460 AT4G22770.1 42.697 267 123 7 87 334 70 325 5.13e-53 178
Msa1318460 AT4G17950.1 48.416 221 77 5 89 277 131 346 7.59e-53 180
Msa1318460 AT5G46640.1 52.404 208 76 3 88 277 101 303 7.49e-52 176
Msa1318460 AT5G51590.1 44.796 221 83 4 89 272 78 296 1.47e-48 169
Msa1318460 AT4G00200.2 50.732 205 77 4 77 270 48 239 2.61e-47 162
Msa1318460 AT4G00200.1 50.732 205 77 4 77 270 48 239 2.61e-47 162
Msa1318460 AT5G62260.1 42.731 227 108 5 77 282 63 288 3.15e-47 164
Msa1318460 AT5G62260.3 42.731 227 108 5 77 282 63 288 3.15e-47 164
Msa1318460 AT5G62260.2 43.256 215 100 5 77 270 63 276 7.87e-45 155
Msa1318460 AT3G04590.1 40.796 201 105 3 77 271 93 285 5.44e-37 135
Msa1318460 AT3G04590.2 41.206 199 103 3 77 269 93 283 3.43e-36 135
Msa1318460 AT2G36560.1 35.484 186 97 6 88 271 59 223 2.72e-22 98.2
Msa1318460 AT3G60870.1 35.359 181 106 4 89 269 27 196 3.09e-19 86.3
Msa1318460 AT4G14465.1 44.340 106 56 1 117 222 60 162 4.46e-19 86.3
Msa1318460 AT5G49700.1 31.844 179 113 4 121 295 53 226 1.98e-18 84.3
Msa1318460 AT1G76500.1 35.329 167 93 3 112 269 60 220 2.41e-17 81.6
Msa1318460 AT2G42940.1 40.000 150 84 3 121 270 50 193 1.64e-15 75.9
Msa1318460 AT2G45430.1 36.264 182 106 5 121 298 86 261 1.73e-15 76.6
Msa1318460 AT5G28590.1 37.313 134 58 2 148 281 24 131 6.08e-15 73.6
Msa1318460 AT1G14490.2 31.034 174 107 4 125 290 25 193 4.15e-14 71.2
Msa1318460 AT1G14490.1 31.034 174 107 4 125 290 6 174 7.29e-14 70.1
Msa1318460 AT3G04570.1 37.888 161 86 4 117 269 73 227 1.19e-13 71.2
Msa1318460 AT4G12050.1 41.333 150 81 5 121 269 115 258 1.91e-13 70.9
Msa1318460 AT3G55560.1 40.800 125 72 1 145 269 106 228 1.96e-13 70.5
Msa1318460 AT4G22810.1 38.816 152 84 4 121 269 102 247 6.47e-13 68.9
Msa1318460 AT2G35270.1 35.811 148 89 2 122 269 76 217 4.69e-12 66.2
Msa1318460 AT1G20900.1 38.065 155 81 3 124 269 86 234 8.78e-12 65.5

Find 154 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCATTCTTCTTGTTCT+TGG 0.101201 8_4:-20511517 None:intergenic
GGCGCCCTCGACCGCGTTTC+TGG 0.107198 8_4:-20507048 None:intergenic
ATCAATGTAGGTGCTCCTTC+TGG 0.171915 8_4:+20506896 Msa1318460:CDS
TAGAATTCTTTCTTGACTTT+TGG 0.210221 8_4:+20511830 Msa1318460:three_prime_UTR
TTTGGATTGCTGAATATTAA+AGG 0.220950 8_4:+20506609 Msa1318460:five_prime_UTR
CTTTGTCAGGCTTCGACATC+TGG 0.233098 8_4:+20510373 Msa1318460:CDS
CTCCAACATCTCTCAATTCT+TGG 0.272580 8_4:+20511634 Msa1318460:CDS
CGCGGTCGAGGGCGCCCTCC+AGG 0.273094 8_4:+20507055 Msa1318460:CDS
CGTGGAAGGCCTAGAAAATA+TGG 0.274820 8_4:+20506956 Msa1318460:CDS
TGGACTTGCGGTACGGTTCC+AGG 0.276043 8_4:-20507028 None:intergenic
CAGAGATAGGTGGTAAAGTT+TGG 0.303279 8_4:+20506591 Msa1318460:intron
GACTTAGGGCTTGAAGTTCT+TGG 0.315187 8_4:+20512037 Msa1318460:three_prime_UTR
TCAATGTAGGTGCTCCTTCT+GGG 0.321161 8_4:+20506897 Msa1318460:CDS
CCGATGGATTCTTCTGGAAT+TGG 0.331532 8_4:+20506863 Msa1318460:CDS
CGAGGGCGCCCTCCAGGGTC+CGG 0.339305 8_4:+20507061 Msa1318460:CDS
AAATGTTCAACGGTTTCATA+TGG 0.341273 8_4:-20505421 None:intergenic
CAGAGAGGATTACCTGGTTC+TGG 0.345081 8_4:+20506737 Msa1318460:CDS
AAACAACAGTTGGCTTCTTT+CGG 0.348817 8_4:+20507088 Msa1318460:CDS
GTATACATATTTAAGATTCA+TGG 0.349303 8_4:+20511752 Msa1318460:three_prime_UTR
TATTAGCATACACCAGTATT+GGG 0.349465 8_4:+20511730 Msa1318460:three_prime_UTR
CTATGGTTGATTGACTTTAG+AGG 0.353332 8_4:+20511870 Msa1318460:three_prime_UTR
AATGGAAATAATCTTGTTAG+AGG 0.356808 8_4:-20512068 None:intergenic
CTAACAAGATTATTTCCATT+AGG 0.361271 8_4:+20512071 Msa1318460:three_prime_UTR
CTCTACTGTGACACTTTGTC+AGG 0.364472 8_4:+20510360 Msa1318460:CDS
CATGACTATCAGGTGATAAT+CGG 0.364976 8_4:+20511468 Msa1318460:intron
ACGGTTCCAGGATGGCTTGC+TGG 0.370058 8_4:-20507016 None:intergenic
ACCTCTAGTTCAGCTGGAAA+TGG 0.376286 8_4:+20509477 Msa1318460:CDS
TTTGTCATTAGATTGTTTCA+TGG 0.378708 8_4:+20512107 Msa1318460:three_prime_UTR
AGGCCTTCCACGCTTCCTTT+TGG 0.379855 8_4:-20506945 None:intergenic
TCTTCGACATGTGGTGACTT+AGG 0.388356 8_4:+20512022 Msa1318460:three_prime_UTR
CATTGCTGCAAGTCCTGTTC+AGG 0.396488 8_4:+20510954 Msa1318460:CDS
GCATTAAATCAATGTCCATA+TGG 0.398657 8_4:-20511689 None:intergenic
TTGGATTGCTGAATATTAAA+GGG 0.401920 8_4:+20506610 Msa1318460:five_prime_UTR
CTTCGACATGTGGTGACTTA+GGG 0.404144 8_4:+20512023 Msa1318460:three_prime_UTR
GATGATTTATTTCTGAATCC+AGG 0.404267 8_4:+20512152 Msa1318460:three_prime_UTR
GACCAAATGGCGGCATTATC+CGG 0.406280 8_4:+20506695 Msa1318460:CDS
ACTTGATTGAAACGATGAAT+TGG 0.406986 8_4:-20506807 None:intergenic
GACATAACAAATATAGTTCT+AGG 0.411478 8_4:-20510322 None:intergenic
CATGTCATCTCCATTGCAAT+TGG 0.414837 8_4:+20509510 Msa1318460:CDS
ATAATAGCAGTTACCTGAAC+AGG 0.415577 8_4:-20510967 None:intergenic
GAAATGCTATTCATTGCAAC+TGG 0.419844 8_4:-20511594 None:intergenic
AGTCCTGATGGTCGTGTCAT+TGG 0.425886 8_4:+20510910 Msa1318460:CDS
TAAATATGTATACCCAATAC+TGG 0.429520 8_4:-20511742 None:intergenic
ATTGGTGGTGGTGGTACTAT+TGG 0.430130 8_4:+20506830 Msa1318460:CDS
AAGCCTGACAGGCTCTTACT+TGG 0.439341 8_4:+20510831 Msa1318460:CDS
TTTGAAACAAAACCCGGTCT+AGG 0.440307 8_4:-20512180 None:intergenic
TTATTAGCATACACCAGTAT+TGG 0.440856 8_4:+20511729 Msa1318460:three_prime_UTR
CCAGGATGGCTTGCTGGTGT+TGG 0.440973 8_4:-20507010 None:intergenic
TTTGTCAGGCTTCGACATCT+GGG 0.444025 8_4:+20510374 Msa1318460:CDS
AAAATCGCAAGATTTCCTAA+TGG 0.447477 8_4:-20512086 None:intergenic
CAACCAAGTAAGAGCCTGTC+AGG 0.452416 8_4:-20510834 None:intergenic
TCATCGTTTCAATCAAGTAT+TGG 0.453396 8_4:+20506812 Msa1318460:CDS
GTTGGAGTCAGACTTTGATT+TGG 0.457634 8_4:-20511618 None:intergenic
TTGGCCTGCATCGCGTCCAT+TGG 0.459716 8_4:+20511653 Msa1318460:CDS
AACCGGATAATGCCGCCATT+TGG 0.465036 8_4:-20506697 None:intergenic
CCAACACCAGCAAGCCATCC+TGG 0.467624 8_4:+20507010 Msa1318460:CDS
CATAAAGTATGATGCAGAAC+CGG 0.471132 8_4:-20506714 None:intergenic
GAGGGCGCCCTCCAGGGTCC+GGG 0.478636 8_4:+20507062 Msa1318460:CDS
GTATTCAGCGGACGAATACC+AGG 0.479562 8_4:-20506785 None:intergenic
ACGATGCCGATGGATTCTTC+TGG 0.481478 8_4:+20506857 Msa1318460:CDS
CAAGTCCAGAAACGCGGTCG+AGG 0.487055 8_4:+20507043 Msa1318460:CDS
GGTTTGACCTCTAGTTCAGC+TGG 0.490467 8_4:+20509471 Msa1318460:CDS
CATTAAATCAATGTCCATAT+GGG 0.490752 8_4:-20511688 None:intergenic
CAATCAAGTATTGGTGGTGG+TGG 0.492198 8_4:+20506821 Msa1318460:CDS
ATATCCAATGGACGCGATGC+AGG 0.493146 8_4:-20511657 None:intergenic
AATGTTCAACGGTTTCATAT+GGG 0.496185 8_4:-20505420 None:intergenic
ATGATTTATTTCTGAATCCA+GGG 0.496324 8_4:+20512153 Msa1318460:three_prime_UTR
CCACCAATGACACGACCATC+AGG 0.497274 8_4:-20510913 None:intergenic
GGCCAAGAATTGAGAGATGT+TGG 0.498691 8_4:-20511636 None:intergenic
GATGGCTCGCGTAATCGAAC+GGG 0.499725 8_4:+20510865 Msa1318460:CDS
GGGAATTATGCAATTCATGT+TGG 0.500890 8_4:-20506763 None:intergenic
TCATGTTGGTTTCCAGAACC+AGG 0.501139 8_4:-20506749 None:intergenic
GGGGAATTAAAGAGAGATGA+TGG 0.503265 8_4:-20505400 None:intergenic
CGTGTCATTGGTGGAGGCGT+CGG 0.504210 8_4:+20510922 Msa1318460:CDS
GTGGAAGGCCTAGAAAATAT+GGG 0.512348 8_4:+20506957 Msa1318460:CDS
GTTTCTCTTGCCAGTCCTGA+TGG 0.512425 8_4:+20510898 Msa1318460:CDS
GGATATGCGTAATTCCCATA+TGG 0.512750 8_4:+20511674 Msa1318460:CDS
GGATCTCAATGTATCAATGT+AGG 0.515058 8_4:+20506884 Msa1318460:CDS
TGATAATCGGGAGCTTTATG+TGG 0.516440 8_4:+20511481 Msa1318460:CDS
ATGACTATCAGGTGATAATC+GGG 0.516769 8_4:+20511469 Msa1318460:intron
CAATGTAGGTGCTCCTTCTG+GGG 0.519453 8_4:+20506898 Msa1318460:CDS
GGGGCTTGAATTTAAATGCA+TGG 0.521445 8_4:+20506664 Msa1318460:exon
ATCAACGAGATTAGCAGAAG+TGG 0.521490 8_4:+20511995 Msa1318460:three_prime_UTR
CACAGTAGAGACAGCACCAT+TGG 0.523000 8_4:-20510347 None:intergenic
CAACCGGTGAACCTGCCAAA+AGG 0.524135 8_4:+20506930 Msa1318460:CDS
GCGGTCGAGGGCGCCCTCCA+GGG 0.524809 8_4:+20507056 Msa1318460:CDS
CCTGATGGTCGTGTCATTGG+TGG 0.525149 8_4:+20510913 Msa1318460:CDS
CATGGATCGAGGGGACCAAA+TGG 0.527963 8_4:+20506682 Msa1318460:exon
TTCGAGATACTAAGCCTGAC+AGG 0.527978 8_4:+20510820 Msa1318460:CDS
AATTTAAATGCATGGATCGA+GGG 0.528702 8_4:+20506672 Msa1318460:exon
GATTCAGAAGATCAAGAAGT+TGG 0.530546 8_4:+20511537 Msa1318460:CDS
TTGTCAGGCTTCGACATCTG+GGG 0.533182 8_4:+20510375 Msa1318460:CDS
CTGCCAAAAGGAAGCGTGGA+AGG 0.533300 8_4:+20506942 Msa1318460:CDS
AATCCAGGGAAAACCTAGAC+CGG 0.535670 8_4:+20512167 Msa1318460:three_prime_UTR
CCTAGAAAATATGGGGCAGA+TGG 0.536022 8_4:+20506965 Msa1318460:CDS
TAGAACTATATTTGTTATGT+CGG 0.537936 8_4:+20510324 Msa1318460:CDS
AGATCAAGAAGTTGGTGTAG+AGG 0.538029 8_4:+20511545 Msa1318460:CDS
GTCATTGGTGGAGGCGTCGG+TGG 0.538671 8_4:+20510925 Msa1318460:CDS
GCGTTTCTGGACTTGCGGTA+CGG 0.541681 8_4:-20507035 None:intergenic
TTGTTGTCAAAGATTGTGAA+GGG 0.543171 8_4:+20506644 Msa1318460:five_prime_UTR
CAAGGGTATGTCGCGACTCG+TGG 0.544115 8_4:+20511954 Msa1318460:three_prime_UTR
TTTGTTGTCAAAGATTGTGA+AGG 0.545465 8_4:+20506643 Msa1318460:five_prime_UTR
ATCGGGAGCTTTATGTGGGG+TGG 0.551191 8_4:+20511486 Msa1318460:CDS
GAATTTAAATGCATGGATCG+AGG 0.552782 8_4:+20506671 Msa1318460:exon
ATGTTCAACGGTTTCATATG+GGG 0.554495 8_4:-20505419 None:intergenic
ATATTTGTTATGTCGGCCAA+TGG 0.560132 8_4:+20510331 Msa1318460:CDS
CATGAATTGCATAATTCCCC+TGG 0.566365 8_4:+20506767 Msa1318460:CDS
GATAATCGGGAGCTTTATGT+GGG 0.567733 8_4:+20511482 Msa1318460:CDS
TCGTTTCAATCAAGTATTGG+TGG 0.568199 8_4:+20506815 Msa1318460:CDS
AAGTCCAGAAACGCGGTCGA+GGG 0.568708 8_4:+20507044 Msa1318460:CDS
AGAGAGAATCAAAACTCAAG+AGG 0.569051 8_4:-20505528 None:intergenic
GTAGAGGAAAATCATCATCA+TGG 0.572777 8_4:+20511561 Msa1318460:CDS
GCATACTTCTCCAATTGCAA+TGG 0.581715 8_4:-20509520 None:intergenic
ACCATTTCCAGCTGAACTAG+AGG 0.582687 8_4:-20509478 None:intergenic
GATGGTCGTGTCATTGGTGG+AGG 0.582808 8_4:+20510916 Msa1318460:CDS
TGTCAGGCTTCGACATCTGG+GGG 0.583807 8_4:+20510376 Msa1318460:CDS
AATTTGATTAATGTCAGCTA+TGG 0.585484 8_4:+20511853 Msa1318460:three_prime_UTR
ATGGAAATAATCTTGTTAGA+GGG 0.585553 8_4:-20512067 None:intergenic
CTTGCGGTACGGTTCCAGGA+TGG 0.586783 8_4:-20507024 None:intergenic
AACAAATTTGAAACAAAACC+CGG 0.588179 8_4:-20512186 None:intergenic
AATGTAGGTGCTCCTTCTGG+GGG 0.588716 8_4:+20506899 Msa1318460:CDS
TATTGGATCCACGATGCCGA+TGG 0.589524 8_4:+20506847 Msa1318460:CDS
TTTCAATCAAGTATTGGTGG+TGG 0.596117 8_4:+20506818 Msa1318460:CDS
AGGGCTTGAAGTTCTTGGAG+AGG 0.596838 8_4:+20512042 Msa1318460:three_prime_UTR
TTTATGCAGAGAGGATTACC+TGG 0.598429 8_4:+20506731 Msa1318460:CDS
TATTCTTCACGAAGATGTGG+TGG 0.598478 8_4:-20505464 None:intergenic
GAATTGTGATTGTGATCAAG+TGG 0.598876 8_4:-20505491 None:intergenic
ATTTAAATGCATGGATCGAG+GGG 0.603640 8_4:+20506673 Msa1318460:exon
TCATATTCTTCACGAAGATG+TGG 0.604516 8_4:-20505467 None:intergenic
TGGGAATTACGCATATCCAA+TGG 0.604904 8_4:-20511669 None:intergenic
GAGAGAATCAAAACTCAAGA+GGG 0.605371 8_4:-20505527 None:intergenic
AATGACACGACCATCAGGAC+TGG 0.614331 8_4:-20510908 None:intergenic
GCATCATACTTTATGCAGAG+AGG 0.620965 8_4:+20506722 Msa1318460:CDS
AACGATGAATTGGTATTCAG+CGG 0.622414 8_4:-20506797 None:intergenic
ATGGACATTGATTTAATGCG+TGG 0.625354 8_4:+20511693 Msa1318460:CDS
CGACCGCGTTTCTGGACTTG+CGG 0.626523 8_4:-20507040 None:intergenic
AATTAAAGAGAGATGATGGT+GGG 0.628694 8_4:-20505396 None:intergenic
ATCCAGGGAAAACCTAGACC+GGG 0.634249 8_4:+20512168 Msa1318460:three_prime_UTR
GGATCGAGGGGACCAAATGG+CGG 0.637165 8_4:+20506685 Msa1318460:CDS
TGTTGTCAAAGATTGTGAAG+GGG 0.637737 8_4:+20506645 Msa1318460:five_prime_UTR
TGGACATTGATTTAATGCGT+GGG 0.639036 8_4:+20511694 Msa1318460:CDS
TACTTGGTTGCTGATAACGA+TGG 0.650007 8_4:+20510847 Msa1318460:CDS
CCAATTCCAGAAGAATCCAT+CGG 0.651481 8_4:-20506863 None:intergenic
GAACCTGCCAAAAGGAAGCG+TGG 0.653132 8_4:+20506938 Msa1318460:CDS
TGGAAGGCCTAGAAAATATG+GGG 0.659615 8_4:+20506958 Msa1318460:CDS
AGTGGCTAATCTTCGACATG+TGG 0.663359 8_4:+20512013 Msa1318460:three_prime_UTR
AGAAGAATCCATCGGCATCG+TGG 0.669599 8_4:-20506855 None:intergenic
GAATTAAAGAGAGATGATGG+TGG 0.672734 8_4:-20505397 None:intergenic
TTAAATGTGACAGAGATAGG+TGG 0.683753 8_4:+20506581 Msa1318460:intron
ATTGCAATGGAGATGACATG+AGG 0.685631 8_4:-20509507 None:intergenic
TATTCAGCGGACGAATACCA+GGG 0.688364 8_4:-20506784 None:intergenic
ATTCAGCGGACGAATACCAG+GGG 0.743678 8_4:-20506783 None:intergenic
GTACCGCAAGTCCAGAAACG+CGG 0.756258 8_4:+20507037 Msa1318460:CDS
ATAATCGGGAGCTTTATGTG+GGG 0.762572 8_4:+20511483 Msa1318460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATAATTTTTTTTTTATCTA+GGG - chr8_4:20505134-20505153 None:intergenic 10.0%
!!! ATGATTTAAATTTGTTAAAT+GGG - chr8_4:20508113-20508132 None:intergenic 10.0%
!!! AATGATTTAAATTTGTTAAA+TGG - chr8_4:20508114-20508133 None:intergenic 10.0%
!! ATTACTTATATTTATTCATA+CGG + chr8_4:20509014-20509033 Msa1318460:intron 10.0%
!! TAAAATTGAAACTAAAATAT+TGG - chr8_4:20509698-20509717 None:intergenic 10.0%
!!! GTGTAAATTTTATAAAATAA+GGG - chr8_4:20509789-20509808 None:intergenic 10.0%
!!! GCATAATTTTTTTTTTATCT+AGG - chr8_4:20505135-20505154 None:intergenic 15.0%
!!! ATGATTTTTTTCTTCTTTTA+TGG + chr8_4:20505783-20505802 Msa1318460:intron 15.0%
!!! TTAAAGATTTTGTTATTGTT+TGG + chr8_4:20505875-20505894 Msa1318460:intron 15.0%
!! ATTTAATCAGTAAAATCTTT+GGG - chr8_4:20507800-20507819 None:intergenic 15.0%
!! AATTTAATCAGTAAAATCTT+TGG - chr8_4:20507801-20507820 None:intergenic 15.0%
!! TTGTATTGAAACAAATATAA+AGG - chr8_4:20507991-20508010 None:intergenic 15.0%
!!! TGTGTATTAAAATTTAAAAC+AGG - chr8_4:20508511-20508530 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTGGGAT+TGG + chr8_4:20508550-20508569 Msa1318460:intron 15.0%
!!! TTTTTTTTTTTTTTGGGATT+GGG + chr8_4:20508551-20508570 Msa1318460:intron 15.0%
!!! GCTTTTCTTTTTTTAATTTA+CGG + chr8_4:20508736-20508755 Msa1318460:intron 15.0%
!! TATATATTACATAAAGACTT+AGG - chr8_4:20508888-20508907 None:intergenic 15.0%
!! TAAGTCTTTATGTAATATAT+AGG + chr8_4:20508887-20508906 Msa1318460:intron 15.0%
!! AATCATAAATAATAGATATG+TGG - chr8_4:20509757-20509776 None:intergenic 15.0%
!!! GGTGTAAATTTTATAAAATA+AGG - chr8_4:20509790-20509809 None:intergenic 15.0%
!! CTAGTAATAATTTGATAAAA+TGG - chr8_4:20509903-20509922 None:intergenic 15.0%
!!! TTGCTTATTTTATATCAATA+CGG + chr8_4:20509946-20509965 Msa1318460:intron 15.0%
!!! TTTTAAAATTTTCGGATTTT+TGG - chr8_4:20510014-20510033 None:intergenic 15.0%
!!! ATTCTTTTGTATATATGATT+AGG + chr8_4:20510754-20510773 Msa1318460:intron 15.0%
!! ACTACAGAATGTAAAAAAAA+GGG - chr8_4:20505284-20505303 None:intergenic 20.0%
!! AACTACAGAATGTAAAAAAA+AGG - chr8_4:20505285-20505304 None:intergenic 20.0%
!!! TTTCATGTTTCTATATAGTT+TGG + chr8_4:20505969-20505988 Msa1318460:intron 20.0%
!!! TTTATTTCGTTTTAACCATA+TGG - chr8_4:20506345-20506364 None:intergenic 20.0%
!!! GTTTTTATTTGTATGATTTG+TGG + chr8_4:20506420-20506439 Msa1318460:intron 20.0%
!!! GTTTTTTTATTTGTTCATAC+CGG + chr8_4:20507252-20507271 Msa1318460:intron 20.0%
!! TTGTTAATTCAGTTCATTAA+GGG - chr8_4:20507287-20507306 None:intergenic 20.0%
!!! ACTGTCTATTCAAAATTTTA+CGG + chr8_4:20507336-20507355 Msa1318460:intron 20.0%
!! TTTAATCAGTAAAATCTTTG+GGG - chr8_4:20507799-20507818 None:intergenic 20.0%
!! AAATATTATCTTAGTGACAA+AGG - chr8_4:20507957-20507976 None:intergenic 20.0%
!! AAAATATGCATCAATATTTC+TGG - chr8_4:20508029-20508048 None:intergenic 20.0%
!!! ATATTGATGCATATTTTTAC+TGG + chr8_4:20508032-20508051 Msa1318460:intron 20.0%
!!! TATTGATGCATATTTTTACT+GGG + chr8_4:20508033-20508052 Msa1318460:intron 20.0%
!! AATAAGCTTTCAACTATATT+AGG - chr8_4:20508156-20508175 None:intergenic 20.0%
!!! TGAAAGCTTATTTTTATAGT+TGG + chr8_4:20508164-20508183 Msa1318460:intron 20.0%
!! ATTGTCATCAAAAATATACT+TGG - chr8_4:20508220-20508239 None:intergenic 20.0%
!!! CAAATTTTGTTTTCTTACAT+AGG + chr8_4:20508313-20508332 Msa1318460:intron 20.0%
!!! TTTAAAATAAATCTTGACCT+AGG + chr8_4:20508344-20508363 Msa1318460:intron 20.0%
!!! ATTAAAATTTAAAACAGGAC+AGG - chr8_4:20508506-20508525 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGGGATTG+GGG + chr8_4:20508552-20508571 Msa1318460:intron 20.0%
!! TAAATAGGTCAAAATGTATA+TGG + chr8_4:20508928-20508947 Msa1318460:intron 20.0%
!!! GAGTTTAGTTTTTAATGAAA+TGG + chr8_4:20509244-20509263 Msa1318460:intron 20.0%
!! TTAACATAAATCAATCACTT+AGG - chr8_4:20509391-20509410 None:intergenic 20.0%
!!! GTGATTGATTTATGTTAATT+TGG + chr8_4:20509393-20509412 Msa1318460:intron 20.0%
!!! TTAATGTTTTGAGTTGTTAT+TGG + chr8_4:20509443-20509462 Msa1318460:intron 20.0%
!!! TAGCTTTTAAAAGCTTTAAT+TGG + chr8_4:20509663-20509682 Msa1318460:intron 20.0%
!!! AGCTTTTAAAAGCTTTAATT+GGG + chr8_4:20509664-20509683 Msa1318460:intron 20.0%
!! TTATAAAATTTACACCTATC+TGG + chr8_4:20509794-20509813 Msa1318460:intron 20.0%
!!! CCTGTAACTTTTAAAATTTT+CGG - chr8_4:20510022-20510041 None:intergenic 20.0%
!! TAAATGCTAAAACATATCTT+TGG - chr8_4:20510067-20510086 None:intergenic 20.0%
!!! TAGAACTATATTTGTTATGT+CGG + chr8_4:20510324-20510343 Msa1318460:CDS 20.0%
!!! AGAATTCAATCAGTTTTTAT+AGG + chr8_4:20510613-20510632 Msa1318460:intron 20.0%
!! ATCTAACTATTCTAATTCAT+TGG - chr8_4:20511295-20511314 None:intergenic 20.0%
!!! GTTTAATGTTGATAATATAC+TGG - chr8_4:20511401-20511420 None:intergenic 20.0%
!!! GTATACATATTTAAGATTCA+TGG + chr8_4:20511752-20511771 Msa1318460:three_prime_UTR 20.0%
!!! TTTTTAGATTTTGCTTTTTG+TGG + chr8_4:20511929-20511948 Msa1318460:three_prime_UTR 20.0%
!!! TTTTTTTTTATCTAGGGATG+AGG - chr8_4:20505128-20505147 None:intergenic 25.0%
! GAAAGTTGAAAAATGTTCAA+CGG - chr8_4:20505434-20505453 None:intergenic 25.0%
! ATGTGTTAGTATTCATTCAT+AGG + chr8_4:20505595-20505614 Msa1318460:intron 25.0%
! GCTTAAGAAAAAACACAAAA+AGG - chr8_4:20505698-20505717 None:intergenic 25.0%
!!! TTTTGTTTTAGTGTAGCATT+TGG + chr8_4:20505720-20505739 Msa1318460:intron 25.0%
! ATCAAAGGATAAGCTTAAAA+GGG + chr8_4:20505830-20505849 Msa1318460:intron 25.0%
!!! AAGATTTTGTTATTGTTTGG+TGG + chr8_4:20505878-20505897 Msa1318460:intron 25.0%
!!! TTGCTTTTCACATTTAGATA+TGG + chr8_4:20506141-20506160 Msa1318460:intron 25.0%
!!! ATTGGATTTCATTGATTTCA+TGG + chr8_4:20506521-20506540 Msa1318460:intron 25.0%
!! ATTTTAAATGTGACAGAGAT+AGG + chr8_4:20506578-20506597 Msa1318460:intron 25.0%
! TTTGGATTGCTGAATATTAA+AGG + chr8_4:20506609-20506628 Msa1318460:five_prime_UTR 25.0%
! TTGGATTGCTGAATATTAAA+GGG + chr8_4:20506610-20506629 Msa1318460:five_prime_UTR 25.0%
!!! CTATTCCACTTTTTATTTTG+TGG + chr8_4:20507118-20507137 Msa1318460:intron 25.0%
!!! TTTGAAGTTTTATTGAGTCA+AGG + chr8_4:20507230-20507249 Msa1318460:intron 25.0%
! GTTGTTAATTCAGTTCATTA+AGG - chr8_4:20507288-20507307 None:intergenic 25.0%
! GTTTGAAAAATGTGAAGTAA+CGG - chr8_4:20507500-20507519 None:intergenic 25.0%
! ATTGAAAACAAGTCAAGTAA+CGG - chr8_4:20507582-20507601 None:intergenic 25.0%
! ATGTAATTGCTGAAACAATA+GGG - chr8_4:20507768-20507787 None:intergenic 25.0%
! CTATATTAGGTAAATAGACT+AGG - chr8_4:20508143-20508162 None:intergenic 25.0%
!!! TTTTTTTTTTTTGGGATTGG+GGG + chr8_4:20508553-20508572 Msa1318460:intron 25.0%
! TCAAAATGTATATGGATTCA+AGG + chr8_4:20508936-20508955 Msa1318460:intron 25.0%
!!! GTCTGACTCTTTTATTTAAA+TGG + chr8_4:20509077-20509096 Msa1318460:intron 25.0%
!! TGGTATAAAGAAGTATAACT+TGG + chr8_4:20509340-20509359 Msa1318460:intron 25.0%
!! GGTATAAAGAAGTATAACTT+GGG + chr8_4:20509341-20509360 Msa1318460:intron 25.0%
!!! ATATGTCTGTCGTTTATTTT+TGG + chr8_4:20509586-20509605 Msa1318460:intron 25.0%
!! AGTACCTTTAATCAATGTTT+TGG + chr8_4:20509624-20509643 Msa1318460:intron 25.0%
!!! TTGAAGCTTTGAAAAGATAA+GGG - chr8_4:20509722-20509741 None:intergenic 25.0%
!!! CCGAAAATTTTAAAAGTTAC+AGG + chr8_4:20510019-20510038 Msa1318460:intron 25.0%
! AGGACCAAAGAAATAAAATA+AGG + chr8_4:20510039-20510058 Msa1318460:intron 25.0%
! GGACCAAAGAAATAAAATAA+GGG + chr8_4:20510040-20510059 Msa1318460:intron 25.0%
!!! GTTAACAGTGCTTTTTTTAA+TGG + chr8_4:20510092-20510111 Msa1318460:intron 25.0%
!!! ATGGAAGTACTTTTTTAGAA+AGG + chr8_4:20510111-20510130 Msa1318460:intron 25.0%
!!! TGGAAGTACTTTTTTAGAAA+GGG + chr8_4:20510112-20510131 Msa1318460:intron 25.0%
! ACATGAGACAAAAATTCAAA+TGG - chr8_4:20510197-20510216 None:intergenic 25.0%
! CTTACATATGATTACACAAA+TGG - chr8_4:20510224-20510243 None:intergenic 25.0%
! GACATAACAAATATAGTTCT+AGG - chr8_4:20510325-20510344 None:intergenic 25.0%
!! TTTTTATAGGCAAATGTTAG+TGG + chr8_4:20510626-20510645 Msa1318460:intron 25.0%
! TGATTATAAACTCCATAACA+TGG - chr8_4:20510673-20510692 None:intergenic 25.0%
!! TTATGAACTTTTGCTTCAAT+AGG + chr8_4:20510792-20510811 Msa1318460:intron 25.0%
!! TATGAACTTTTGCTTCAATA+GGG + chr8_4:20510793-20510812 Msa1318460:intron 25.0%
!! TTTCTAAGTTTCTGATTTTG+AGG - chr8_4:20511030-20511049 None:intergenic 25.0%
!! CTTATGTTTTCTGTTTGTAT+AGG + chr8_4:20511175-20511194 Msa1318460:intron 25.0%
! TAGCAATCCAAATAAAACTA+GGG - chr8_4:20511436-20511455 None:intergenic 25.0%
! TTAGCAATCCAAATAAAACT+AGG - chr8_4:20511437-20511456 None:intergenic 25.0%
! TTTGGATTGCTAAATTTGAT+TGG + chr8_4:20511444-20511463 Msa1318460:intron 25.0%
! CATTAAATCAATGTCCATAT+GGG - chr8_4:20511691-20511710 None:intergenic 25.0%
! TAAATATGTATACCCAATAC+TGG - chr8_4:20511745-20511764 None:intergenic 25.0%
!! TAGAATTCTTTCTTGACTTT+TGG + chr8_4:20511830-20511849 Msa1318460:three_prime_UTR 25.0%
! AATTTGATTAATGTCAGCTA+TGG + chr8_4:20511853-20511872 Msa1318460:three_prime_UTR 25.0%
! ATGGAAATAATCTTGTTAGA+GGG - chr8_4:20512070-20512089 None:intergenic 25.0%
! AATGGAAATAATCTTGTTAG+AGG - chr8_4:20512071-20512090 None:intergenic 25.0%
! CTAACAAGATTATTTCCATT+AGG + chr8_4:20512071-20512090 Msa1318460:three_prime_UTR 25.0%
! TTTGTCATTAGATTGTTTCA+TGG + chr8_4:20512107-20512126 Msa1318460:three_prime_UTR 25.0%
!!! ATGATTTATTTCTGAATCCA+GGG + chr8_4:20512153-20512172 Msa1318460:three_prime_UTR 25.0%
!! AACAAATTTGAAACAAAACC+CGG - chr8_4:20512189-20512208 None:intergenic 25.0%
! AATTAAAGAGAGATGATGGT+GGG - chr8_4:20505399-20505418 None:intergenic 30.0%
AATGTTCAACGGTTTCATAT+GGG - chr8_4:20505423-20505442 None:intergenic 30.0%
AAATGTTCAACGGTTTCATA+TGG - chr8_4:20505424-20505443 None:intergenic 30.0%
TATCTCTTTCTTATGCTTTG+AGG + chr8_4:20505625-20505644 Msa1318460:intron 30.0%
CATCAAAGGATAAGCTTAAA+AGG + chr8_4:20505829-20505848 Msa1318460:intron 30.0%
CTACAAATTCAATTAGAGTG+AGG - chr8_4:20506023-20506042 None:intergenic 30.0%
! GACAACTAAAAAGTACAACA+AGG - chr8_4:20506067-20506086 None:intergenic 30.0%
TAAATGTGAAAAGCAAGCAA+AGG - chr8_4:20506137-20506156 None:intergenic 30.0%
!! TGGTTGATGAGTTTAAGTTA+AGG + chr8_4:20506207-20506226 Msa1318460:intron 30.0%
! TGATGAGTTTAAGTTAAGGT+CGG + chr8_4:20506211-20506230 Msa1318460:intron 30.0%
ATATGGTTCTCAGAAAAAAG+GGG - chr8_4:20506328-20506347 None:intergenic 30.0%
CATATGGTTCTCAGAAAAAA+GGG - chr8_4:20506329-20506348 None:intergenic 30.0%
! AACTGCTGTCATTGATTATA+TGG + chr8_4:20506455-20506474 Msa1318460:intron 30.0%
ATCAATGAAATCCAATATGC+AGG - chr8_4:20506517-20506536 None:intergenic 30.0%
! TTTGTTGTCAAAGATTGTGA+AGG + chr8_4:20506643-20506662 Msa1318460:five_prime_UTR 30.0%
TTGTTGTCAAAGATTGTGAA+GGG + chr8_4:20506644-20506663 Msa1318460:five_prime_UTR 30.0%
AATTTAAATGCATGGATCGA+GGG + chr8_4:20506672-20506691 Msa1318460:exon 30.0%
ACTTGATTGAAACGATGAAT+TGG - chr8_4:20506810-20506829 None:intergenic 30.0%
TCATCGTTTCAATCAAGTAT+TGG + chr8_4:20506812-20506831 Msa1318460:CDS 30.0%
AAACGCCACAAAATAAAAAG+TGG - chr8_4:20507126-20507145 None:intergenic 30.0%
TTACGGAATACAAAGATAGA+TGG + chr8_4:20507353-20507372 Msa1318460:intron 30.0%
TACGGAATACAAAGATAGAT+GGG + chr8_4:20507354-20507373 Msa1318460:intron 30.0%
GTTGAAAAACAGCTAAGTAA+CGG - chr8_4:20507697-20507716 None:intergenic 30.0%
GATGTAATTGCTGAAACAAT+AGG - chr8_4:20507769-20507788 None:intergenic 30.0%
! CATCGAAACTTAGACTATTT+TGG + chr8_4:20507831-20507850 Msa1318460:intron 30.0%
!!! ACTTAGACTATTTTGGTCAT+TGG + chr8_4:20507838-20507857 Msa1318460:intron 30.0%
! AACAAATAATGTGGACTACT+AGG - chr8_4:20507934-20507953 None:intergenic 30.0%
TGACAAAGGAACAAATAATG+TGG - chr8_4:20507943-20507962 None:intergenic 30.0%
!! ATGCATCAATATTTCTGGTA+TGG - chr8_4:20508024-20508043 None:intergenic 30.0%
TACTGGGATTATAAGTGAAA+TGG + chr8_4:20508049-20508068 Msa1318460:intron 30.0%
ACTGGGATTATAAGTGAAAT+GGG + chr8_4:20508050-20508069 Msa1318460:intron 30.0%
! GCCTTATTATTAAATTGACC+TGG + chr8_4:20508087-20508106 Msa1318460:intron 30.0%
GCCAGGTCAATTTAATAATA+AGG - chr8_4:20508091-20508110 None:intergenic 30.0%
!! TTAAATTTGTTAAATGGGCC+AGG - chr8_4:20508108-20508127 None:intergenic 30.0%
ATTAGGTAAATAGACTAGGT+AGG - chr8_4:20508139-20508158 None:intergenic 30.0%
AATAAATCTTGACCTAGGTT+AGG + chr8_4:20508349-20508368 Msa1318460:intron 30.0%
!!! TTTTTTTTTTTGGGATTGGG+GGG + chr8_4:20508554-20508573 Msa1318460:intron 30.0%
! TTTTTATAGTGAGGCCTTTA+GGG + chr8_4:20508668-20508687 Msa1318460:intron 30.0%
TATGTAATATATAGGCCACT+AGG + chr8_4:20508895-20508914 Msa1318460:intron 30.0%
ATTTAAAGAGTTAGTCCTAG+TGG - chr8_4:20508913-20508932 None:intergenic 30.0%
CTAGGACTAACTCTTTAAAT+AGG + chr8_4:20508913-20508932 Msa1318460:intron 30.0%
GACTATAAGACATTTCAGAT+AGG + chr8_4:20509049-20509068 Msa1318460:intron 30.0%
TCTCTTAGAATGATCTTATG+CGG + chr8_4:20509282-20509301 Msa1318460:intron 30.0%
GATAAATTGTTGTGAATCTG+TGG + chr8_4:20509320-20509339 Msa1318460:intron 30.0%
! GGAACCAAAACATTGATTAA+AGG - chr8_4:20509631-20509650 None:intergenic 30.0%
!!! TCAATGTTTTGGTTCCAATT+CGG + chr8_4:20509635-20509654 Msa1318460:intron 30.0%
TAAAAGCTAATCTACCGAAT+TGG - chr8_4:20509652-20509671 None:intergenic 30.0%
!! GTTGAAGCTTTGAAAAGATA+AGG - chr8_4:20509723-20509742 None:intergenic 30.0%
! TATCTTTTCAAAGCTTCAAC+TGG + chr8_4:20509723-20509742 Msa1318460:intron 30.0%
! ATCTTTTCAAAGCTTCAACT+GGG + chr8_4:20509724-20509743 Msa1318460:intron 30.0%
TGCTAGTGTTACATAGAAAA+GGG - chr8_4:20509822-20509841 None:intergenic 30.0%
!!! GGTCCCTTATTTTATTTCTT+TGG - chr8_4:20510046-20510065 None:intergenic 30.0%
TCCACTAACATTTCCATATA+GGG - chr8_4:20510557-20510576 None:intergenic 30.0%
ATCCACTAACATTTCCATAT+AGG - chr8_4:20510558-20510577 None:intergenic 30.0%
! GTGTTAAAGAGACATTTTGA+AGG - chr8_4:20510721-20510740 None:intergenic 30.0%
! ATGAACTTTTGCTTCAATAG+GGG + chr8_4:20510794-20510813 Msa1318460:intron 30.0%
TCTGTTTGTATAGGAAATAG+TGG + chr8_4:20511184-20511203 Msa1318460:intron 30.0%
CTACTTAAGTTACACATGAT+TGG + chr8_4:20511342-20511361 Msa1318460:intron 30.0%
!!! TGCAAAACCCTAGTTTTATT+TGG + chr8_4:20511426-20511445 Msa1318460:intron 30.0%
!! TTCTTCTTGTTCTTGGTTTT+TGG - chr8_4:20511513-20511532 None:intergenic 30.0%
ATCTTCATTCTTCTTGTTCT+TGG - chr8_4:20511520-20511539 None:intergenic 30.0%
GCATTAAATCAATGTCCATA+TGG - chr8_4:20511692-20511711 None:intergenic 30.0%
TTATTAGCATACACCAGTAT+TGG + chr8_4:20511729-20511748 Msa1318460:three_prime_UTR 30.0%
TATTAGCATACACCAGTATT+GGG + chr8_4:20511730-20511749 Msa1318460:three_prime_UTR 30.0%
!!! ATTTTGCTTTTTGTGGTTCA+AGG + chr8_4:20511936-20511955 Msa1318460:three_prime_UTR 30.0%
!!! TTTTGCTTTTTGTGGTTCAA+GGG + chr8_4:20511937-20511956 Msa1318460:three_prime_UTR 30.0%
AAAATCGCAAGATTTCCTAA+TGG - chr8_4:20512089-20512108 None:intergenic 30.0%
!! GATGATTTATTTCTGAATCC+AGG + chr8_4:20512152-20512171 Msa1318460:three_prime_UTR 30.0%
! GAATTAAAGAGAGATGATGG+TGG - chr8_4:20505400-20505419 None:intergenic 35.0%
ATGTTCAACGGTTTCATATG+GGG - chr8_4:20505422-20505441 None:intergenic 35.0%
TCATATTCTTCACGAAGATG+TGG - chr8_4:20505470-20505489 None:intergenic 35.0%
GAATTGTGATTGTGATCAAG+TGG - chr8_4:20505494-20505513 None:intergenic 35.0%
GAGAGAATCAAAACTCAAGA+GGG - chr8_4:20505530-20505549 None:intergenic 35.0%
AGAGAGAATCAAAACTCAAG+AGG - chr8_4:20505531-20505550 None:intergenic 35.0%
ACACAAAAAGGCTACAACTT+TGG - chr8_4:20505686-20505705 None:intergenic 35.0%
TTTGTGAGTGTATGCATCAA+AGG + chr8_4:20505815-20505834 Msa1318460:intron 35.0%
TTAGTTGTCTTCTGCATGTT+TGG + chr8_4:20506078-20506097 Msa1318460:intron 35.0%
AAAAGGACCTTAAGACTCAA+AGG - chr8_4:20506108-20506127 None:intergenic 35.0%
GCAAGCAAAGGAAAAAGAAA+AGG - chr8_4:20506125-20506144 None:intergenic 35.0%
ACTTAAACTCATCAACCACT+TGG - chr8_4:20506205-20506224 None:intergenic 35.0%
TCCCTGACTTAAACAATCTT+TGG + chr8_4:20506259-20506278 Msa1318460:intron 35.0%
GCCAAAGATTGTTTAAGTCA+GGG - chr8_4:20506263-20506282 None:intergenic 35.0%
AGCCAAAGATTGTTTAAGTC+AGG - chr8_4:20506264-20506283 None:intergenic 35.0%
! GGTTCTGGTAATCCAAAATT+CGG - chr8_4:20506307-20506326 None:intergenic 35.0%
CCATATGGTTCTCAGAAAAA+AGG - chr8_4:20506330-20506349 None:intergenic 35.0%
!!! CCTTTTTTCTGAGAACCATA+TGG + chr8_4:20506327-20506346 Msa1318460:intron 35.0%
TTAAATGTGACAGAGATAGG+TGG + chr8_4:20506581-20506600 Msa1318460:intron 35.0%
TGTTGTCAAAGATTGTGAAG+GGG + chr8_4:20506645-20506664 Msa1318460:five_prime_UTR 35.0%
GAATTTAAATGCATGGATCG+AGG + chr8_4:20506671-20506690 Msa1318460:exon 35.0%
ATTTAAATGCATGGATCGAG+GGG + chr8_4:20506673-20506692 Msa1318460:exon 35.0%
CATAAAGTATGATGCAGAAC+CGG - chr8_4:20506717-20506736 None:intergenic 35.0%
GGGAATTATGCAATTCATGT+TGG - chr8_4:20506766-20506785 None:intergenic 35.0%
AACGATGAATTGGTATTCAG+CGG - chr8_4:20506800-20506819 None:intergenic 35.0%
!! TCGTTTCAATCAAGTATTGG+TGG + chr8_4:20506815-20506834 Msa1318460:CDS 35.0%
!! TTTCAATCAAGTATTGGTGG+TGG + chr8_4:20506818-20506837 Msa1318460:CDS 35.0%
GGATCTCAATGTATCAATGT+AGG + chr8_4:20506884-20506903 Msa1318460:CDS 35.0%
! AAACAACAGTTGGCTTCTTT+CGG + chr8_4:20507088-20507107 Msa1318460:CDS 35.0%
CTATACAATCGAACAACACA+TGG - chr8_4:20507208-20507227 None:intergenic 35.0%
TCATTAAGGGATTAGAATGC+CGG - chr8_4:20507274-20507293 None:intergenic 35.0%
ACGGAATACAAAGATAGATG+GGG + chr8_4:20507355-20507374 Msa1318460:intron 35.0%
! CTACTAGGAAACAAGTGTTT+TGG - chr8_4:20507919-20507938 None:intergenic 35.0%
TTTAATAATAAGGCCTAGCC+TGG - chr8_4:20508081-20508100 None:intergenic 35.0%
!! CTTTAAAGAGATAGCTCTAG+TGG - chr8_4:20508191-20508210 None:intergenic 35.0%
!!! CCTTAATTTTGAAACAGGAC+AGG - chr8_4:20508617-20508636 None:intergenic 35.0%
CCTGTCCTGTTTCAAAATTA+AGG + chr8_4:20508614-20508633 Msa1318460:intron 35.0%
!!! TTGGGCCTTAATTTTGAAAC+AGG - chr8_4:20508622-20508641 None:intergenic 35.0%
TCAAAATTAAGGCCCAAGTT+TGG + chr8_4:20508625-20508644 Msa1318460:intron 35.0%
CAGATAAACAGACCAAACTT+GGG - chr8_4:20508640-20508659 None:intergenic 35.0%
TCAGATAAACAGACCAAACT+TGG - chr8_4:20508641-20508660 None:intergenic 35.0%
AAGTTTGGTCTGTTTATCTG+AGG + chr8_4:20508640-20508659 Msa1318460:intron 35.0%
CTAAAGGCCTCACTATAAAA+AGG - chr8_4:20508669-20508688 None:intergenic 35.0%
! CTTTTTATAGTGAGGCCTTT+AGG + chr8_4:20508667-20508686 Msa1318460:intron 35.0%
TCATAGTGTCCGCAATTTAA+TGG + chr8_4:20508853-20508872 Msa1318460:intron 35.0%
CATAGTGTCCGCAATTTAAT+GGG + chr8_4:20508854-20508873 Msa1318460:intron 35.0%
CTTGTCCTTATGCATTTCAT+AGG - chr8_4:20509172-20509191 None:intergenic 35.0%
!!! TGTTTTGAGTTGTTATTGGC+AGG + chr8_4:20509447-20509466 Msa1318460:intron 35.0%
GCTAGTGTTACATAGAAAAG+GGG - chr8_4:20509821-20509840 None:intergenic 35.0%
GTGCTAGTGTTACATAGAAA+AGG - chr8_4:20509823-20509842 None:intergenic 35.0%
ATATAGCCACGTACACATAT+CGG - chr8_4:20509871-20509890 None:intergenic 35.0%
!! TGTCGACATGTCAGTTTTAT+TGG + chr8_4:20509923-20509942 Msa1318460:intron 35.0%
! TAAACCCTTTTCTTCTGTGT+AGG + chr8_4:20510261-20510280 Msa1318460:intron 35.0%
ATGTCCTACACAGAAGAAAA+GGG - chr8_4:20510268-20510287 None:intergenic 35.0%
AATGTCCTACACAGAAGAAA+AGG - chr8_4:20510269-20510288 None:intergenic 35.0%
GGACATTGCAACAAAAATTC+TGG + chr8_4:20510282-20510301 Msa1318460:intron 35.0%
!! ATATTTGTTATGTCGGCCAA+TGG + chr8_4:20510331-20510350 Msa1318460:CDS 35.0%
AATCACATAGCAACCCTATA+TGG + chr8_4:20510541-20510560 Msa1318460:intron 35.0%
ACCCTATATGGAAATGTTAG+TGG + chr8_4:20510553-20510572 Msa1318460:intron 35.0%
TGGATGCATTAGCAATTCTT+TGG + chr8_4:20510573-20510592 Msa1318460:intron 35.0%
CATAACATGGCGATCATATA+AGG - chr8_4:20510660-20510679 None:intergenic 35.0%
CTTATATGATCGCCATGTTA+TGG + chr8_4:20510658-20510677 Msa1318460:intron 35.0%
ATAATAGCAGTTACCTGAAC+AGG - chr8_4:20510970-20510989 None:intergenic 35.0%
ACTGCTATTATACTGCTGTT+AGG + chr8_4:20510979-20510998 Msa1318460:intron 35.0%
!!! TCTGATTTTGAGGTGAGAAA+GGG - chr8_4:20511020-20511039 None:intergenic 35.0%
!!! TTCTGATTTTGAGGTGAGAA+AGG - chr8_4:20511021-20511040 None:intergenic 35.0%
! ATAAAACTAGGGTTTTGCAG+CGG - chr8_4:20511425-20511444 None:intergenic 35.0%
! TTTGATTGGTCATGACTATC+AGG + chr8_4:20511458-20511477 Msa1318460:intron 35.0%
CATGACTATCAGGTGATAAT+CGG + chr8_4:20511468-20511487 Msa1318460:intron 35.0%
ATGACTATCAGGTGATAATC+GGG + chr8_4:20511469-20511488 Msa1318460:intron 35.0%
GATTCAGAAGATCAAGAAGT+TGG + chr8_4:20511537-20511556 Msa1318460:CDS 35.0%
GTAGAGGAAAATCATCATCA+TGG + chr8_4:20511561-20511580 Msa1318460:CDS 35.0%
GAAATGCTATTCATTGCAAC+TGG - chr8_4:20511597-20511616 None:intergenic 35.0%
!! ATGGACATTGATTTAATGCG+TGG + chr8_4:20511693-20511712 Msa1318460:CDS 35.0%
!! TGGACATTGATTTAATGCGT+GGG + chr8_4:20511694-20511713 Msa1318460:CDS 35.0%
! CTATGGTTGATTGACTTTAG+AGG + chr8_4:20511870-20511889 Msa1318460:three_prime_UTR 35.0%
!! CTCATATTTTTGTAGCTGTG+AGG + chr8_4:20511898-20511917 Msa1318460:three_prime_UTR 35.0%
GGGGAATTAAAGAGAGATGA+TGG - chr8_4:20505403-20505422 None:intergenic 40.0%
TATTCTTCACGAAGATGTGG+TGG - chr8_4:20505467-20505486 None:intergenic 40.0%
ACAACAAGGAGCTAGATCAA+TGG - chr8_4:20506053-20506072 None:intergenic 40.0%
! TGGTTTGCCTTTGAGTCTTA+AGG + chr8_4:20506098-20506117 Msa1318460:intron 40.0%
TTGAGTAGAGCATAACCAAG+TGG + chr8_4:20506187-20506206 Msa1318460:intron 40.0%
AAGTTAAGGTCGGATCAATG+AGG + chr8_4:20506221-20506240 Msa1318460:intron 40.0%
TAATCCAAAATTCGGCCAGA+AGG - chr8_4:20506299-20506318 None:intergenic 40.0%
TTCTCAGAAAAAAGGGGTTC+TGG - chr8_4:20506322-20506341 None:intergenic 40.0%
! TCTTGTTTGTGCCTGCATAT+TGG + chr8_4:20506503-20506522 Msa1318460:intron 40.0%
CAGAGATAGGTGGTAAAGTT+TGG + chr8_4:20506591-20506610 Msa1318460:intron 40.0%
GGGGCTTGAATTTAAATGCA+TGG + chr8_4:20506664-20506683 Msa1318460:exon 40.0%
GCATCATACTTTATGCAGAG+AGG + chr8_4:20506722-20506741 Msa1318460:CDS 40.0%
TTTATGCAGAGAGGATTACC+TGG + chr8_4:20506731-20506750 Msa1318460:CDS 40.0%
CATGAATTGCATAATTCCCC+TGG + chr8_4:20506767-20506786 Msa1318460:CDS 40.0%
CCAATTCCAGAAGAATCCAT+CGG - chr8_4:20506866-20506885 None:intergenic 40.0%
GTGGAAGGCCTAGAAAATAT+GGG + chr8_4:20506957-20506976 Msa1318460:CDS 40.0%
TGGAAGGCCTAGAAAATATG+GGG + chr8_4:20506958-20506977 Msa1318460:CDS 40.0%
!!! AGCCAACTGTTGTTTTTTCC+CGG - chr8_4:20507083-20507102 None:intergenic 40.0%
CGGAATACAAAGATAGATGG+GGG + chr8_4:20507356-20507375 Msa1318460:intron 40.0%
TTTCGACGCTGATAGTTTCA+TGG - chr8_4:20507454-20507473 None:intergenic 40.0%
GAAAAACAGCTAAGTAACGG+AGG - chr8_4:20507694-20507713 None:intergenic 40.0%
ATCTTGACCTAGGTTAGGTT+TGG + chr8_4:20508354-20508373 Msa1318460:intron 40.0%
TCTTGACCTAGGTTAGGTTT+GGG + chr8_4:20508355-20508374 Msa1318460:intron 40.0%
TCATGCCTGCATCCAAATTA+GGG - chr8_4:20508422-20508441 None:intergenic 40.0%
ATCATGCCTGCATCCAAATT+AGG - chr8_4:20508423-20508442 None:intergenic 40.0%
AAAACAGGACAGGTCTATCA+TGG - chr8_4:20508496-20508515 None:intergenic 40.0%
! GAAATGGGCTTTGCTAATCT+AGG + chr8_4:20508576-20508595 Msa1318460:intron 40.0%
AAACAGGACAGGTCTATCTA+CGG - chr8_4:20508606-20508625 None:intergenic 40.0%
TTTGGTCTGTTTATCTGAGG+TGG + chr8_4:20508643-20508662 Msa1318460:intron 40.0%
TCAATCCAAACACACCCTAA+AGG - chr8_4:20508685-20508704 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG + chr8_4:20508684-20508703 Msa1318460:intron 40.0%
TTAGGGTGTGTTTGGATTGA+GGG + chr8_4:20508685-20508704 Msa1318460:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr8_4:20508691-20508710 Msa1318460:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr8_4:20508695-20508714 Msa1318460:intron 40.0%
CCTGTCATCCCATTAAATTG+CGG - chr8_4:20508865-20508884 None:intergenic 40.0%
TGCCTCCTATGAAATGCATA+AGG + chr8_4:20509164-20509183 Msa1318460:intron 40.0%
GTCCTTATGCATTTCATAGG+AGG - chr8_4:20509169-20509188 None:intergenic 40.0%
TTCTCAAGAACGTAGAGTTG+AGG - chr8_4:20509212-20509231 None:intergenic 40.0%
!! TTTGAGTTGTTATTGGCAGG+TGG + chr8_4:20509450-20509469 Msa1318460:intron 40.0%
ATTGCAATGGAGATGACATG+AGG - chr8_4:20509510-20509529 None:intergenic 40.0%
CATGTCATCTCCATTGCAAT+TGG + chr8_4:20509510-20509529 Msa1318460:CDS 40.0%
GCATACTTCTCCAATTGCAA+TGG - chr8_4:20509523-20509542 None:intergenic 40.0%
TCAAAGCTTCAACTGGGATT+TGG + chr8_4:20509730-20509749 Msa1318460:intron 40.0%
CAAAGCTTCAACTGGGATTT+GGG + chr8_4:20509731-20509750 Msa1318460:intron 40.0%
TATAGCCACGTACACATATC+GGG - chr8_4:20509870-20509889 None:intergenic 40.0%
CGCTCAAATTGCATTCGAAA+AGG - chr8_4:20509973-20509992 None:intergenic 40.0%
CGAATGCAATTTGAGCGAAA+AGG + chr8_4:20509976-20509995 Msa1318460:intron 40.0%
!!! TCGGATTTTTGGTTTCAACG+TGG - chr8_4:20510003-20510022 None:intergenic 40.0%
! AATTCTGGCATTTTCTCAGC+AGG + chr8_4:20510297-20510316 Msa1318460:CDS 40.0%
! ATTCTGGCATTTTCTCAGCA+GGG + chr8_4:20510298-20510317 Msa1318460:CDS 40.0%
GTTCTGTCACATATGAGGTT+TGG + chr8_4:20510398-20510417 Msa1318460:intron 40.0%
! TACTTGGTTGCTGATAACGA+TGG + chr8_4:20510847-20510866 Msa1318460:CDS 40.0%
!!! CTGATTTTGAGGTGAGAAAG+GGG - chr8_4:20511019-20511038 None:intergenic 40.0%
! TGATAATCGGGAGCTTTATG+TGG + chr8_4:20511481-20511500 Msa1318460:CDS 40.0%
! GATAATCGGGAGCTTTATGT+GGG + chr8_4:20511482-20511501 Msa1318460:CDS 40.0%
! ATAATCGGGAGCTTTATGTG+GGG + chr8_4:20511483-20511502 Msa1318460:CDS 40.0%
!! AGATCAAGAAGTTGGTGTAG+AGG + chr8_4:20511545-20511564 Msa1318460:CDS 40.0%
GTTGGAGTCAGACTTTGATT+TGG - chr8_4:20511621-20511640 None:intergenic 40.0%
CTCCAACATCTCTCAATTCT+TGG + chr8_4:20511634-20511653 Msa1318460:CDS 40.0%
TGGGAATTACGCATATCCAA+TGG - chr8_4:20511672-20511691 None:intergenic 40.0%
GGATATGCGTAATTCCCATA+TGG + chr8_4:20511674-20511693 Msa1318460:CDS 40.0%
ATCAACGAGATTAGCAGAAG+TGG + chr8_4:20511995-20512014 Msa1318460:three_prime_UTR 40.0%
! TTTGAAACAAAACCCGGTCT+AGG - chr8_4:20512183-20512202 None:intergenic 40.0%
AAGACCAGCTGAACTGTAAC+AGG - chr8_4:20505922-20505941 None:intergenic 45.0%
GCTAGACTTTGCTTACCTTC+TGG + chr8_4:20506281-20506300 Msa1318460:intron 45.0%
! CTTACCTTCTGGCCGAATTT+TGG + chr8_4:20506292-20506311 Msa1318460:intron 45.0%
!! TCATGTTGGTTTCCAGAACC+AGG - chr8_4:20506752-20506771 None:intergenic 45.0%
TATTCAGCGGACGAATACCA+GGG - chr8_4:20506787-20506806 None:intergenic 45.0%
!! CAATCAAGTATTGGTGGTGG+TGG + chr8_4:20506821-20506840 Msa1318460:CDS 45.0%
!! ATTGGTGGTGGTGGTACTAT+TGG + chr8_4:20506830-20506849 Msa1318460:CDS 45.0%
!! CCGATGGATTCTTCTGGAAT+TGG + chr8_4:20506863-20506882 Msa1318460:CDS 45.0%
ATCAATGTAGGTGCTCCTTC+TGG + chr8_4:20506896-20506915 Msa1318460:CDS 45.0%
TCAATGTAGGTGCTCCTTCT+GGG + chr8_4:20506897-20506916 Msa1318460:CDS 45.0%
CGTGGAAGGCCTAGAAAATA+TGG + chr8_4:20506956-20506975 Msa1318460:CDS 45.0%
! CCATCTGCCCCATATTTTCT+AGG - chr8_4:20506968-20506987 None:intergenic 45.0%
CCTAGAAAATATGGGGCAGA+TGG + chr8_4:20506965-20506984 Msa1318460:CDS 45.0%
GTCCGGGAAAAAACAACAGT+TGG + chr8_4:20507078-20507097 Msa1318460:CDS 45.0%
GGTCGAGCTTTCAAAAGTCT+TGG + chr8_4:20507393-20507412 Msa1318460:intron 45.0%
AATAGGTCAAGAGGCCTCTT+CGG - chr8_4:20508394-20508413 None:intergenic 45.0%
ACCTATTCGCACCCCTAATT+TGG + chr8_4:20508407-20508426 Msa1318460:intron 45.0%
! TCCAAATTAGGGGTGCGAAT+AGG - chr8_4:20508411-20508430 None:intergenic 45.0%
CATGCCTGCATCCAAATTAG+GGG - chr8_4:20508421-20508440 None:intergenic 45.0%
TTGGATGCAGGCATGATAAG+TGG + chr8_4:20508426-20508445 Msa1318460:intron 45.0%
! GCAGGCATGATAAGTGGTTT+TGG + chr8_4:20508432-20508451 Msa1318460:intron 45.0%
!!! TTTTTGGGATTGGGGGGAAA+TGG + chr8_4:20508560-20508579 Msa1318460:intron 45.0%
!!! TTTTGGGATTGGGGGGAAAT+GGG + chr8_4:20508561-20508580 Msa1318460:intron 45.0%
! GAGGTGGCCTTTTTATAGTG+AGG + chr8_4:20508659-20508678 Msa1318460:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr8_4:20508694-20508713 Msa1318460:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr8_4:20508696-20508715 Msa1318460:intron 45.0%
CCGCAATTTAATGGGATGAC+AGG + chr8_4:20508862-20508881 Msa1318460:intron 45.0%
ACGTTCTTGAGAAACGTGAC+TGG + chr8_4:20509219-20509238 Msa1318460:intron 45.0%
TATGCGGCAAGTAGCAAAGA+TGG + chr8_4:20509298-20509317 Msa1318460:intron 45.0%
! ACCTCTAGTTCAGCTGGAAA+TGG + chr8_4:20509477-20509496 Msa1318460:CDS 45.0%
ACCATTTCCAGCTGAACTAG+AGG - chr8_4:20509481-20509500 None:intergenic 45.0%
CATAGAAAAGGGGTCCAGAT+AGG - chr8_4:20509811-20509830 None:intergenic 45.0%
CTCTACTGTGACACTTTGTC+AGG + chr8_4:20510360-20510379 Msa1318460:CDS 45.0%
TTTGTCAGGCTTCGACATCT+GGG + chr8_4:20510374-20510393 Msa1318460:CDS 45.0%
TTCGAGATACTAAGCCTGAC+AGG + chr8_4:20510820-20510839 Msa1318460:CDS 45.0%
GGCCAAGAATTGAGAGATGT+TGG - chr8_4:20511639-20511658 None:intergenic 45.0%
AGTGGCTAATCTTCGACATG+TGG + chr8_4:20512013-20512032 Msa1318460:three_prime_UTR 45.0%
TCTTCGACATGTGGTGACTT+AGG + chr8_4:20512022-20512041 Msa1318460:three_prime_UTR 45.0%
CTTCGACATGTGGTGACTTA+GGG + chr8_4:20512023-20512042 Msa1318460:three_prime_UTR 45.0%
GACTTAGGGCTTGAAGTTCT+TGG + chr8_4:20512037-20512056 Msa1318460:three_prime_UTR 45.0%
AATCCAGGGAAAACCTAGAC+CGG + chr8_4:20512167-20512186 Msa1318460:three_prime_UTR 45.0%
!!! TAACAATAAATTTTTTATTT+TGG + chr8_4:20508269-20508288 Msa1318460:intron 5.0%
!!! TGTTTTTTTTTTTTTTTTTT+TGG + chr8_4:20508544-20508563 Msa1318460:intron 5.0%
!!! GTTTTTTTTTTTTTTTTTTT+GGG + chr8_4:20508545-20508564 Msa1318460:intron 5.0%
TGGACCTGTTACAGTTCAGC+TGG + chr8_4:20505915-20505934 Msa1318460:intron 50.0%
GACCAAATGGCGGCATTATC+CGG + chr8_4:20506695-20506714 Msa1318460:CDS 50.0%
AACCGGATAATGCCGCCATT+TGG - chr8_4:20506700-20506719 None:intergenic 50.0%
CAGAGAGGATTACCTGGTTC+TGG + chr8_4:20506737-20506756 Msa1318460:CDS 50.0%
ATTCAGCGGACGAATACCAG+GGG - chr8_4:20506786-20506805 None:intergenic 50.0%
GTATTCAGCGGACGAATACC+AGG - chr8_4:20506788-20506807 None:intergenic 50.0%
TATTGGATCCACGATGCCGA+TGG + chr8_4:20506847-20506866 Msa1318460:CDS 50.0%
AGAAGAATCCATCGGCATCG+TGG - chr8_4:20506858-20506877 None:intergenic 50.0%
! ACGATGCCGATGGATTCTTC+TGG + chr8_4:20506857-20506876 Msa1318460:CDS 50.0%
CAATGTAGGTGCTCCTTCTG+GGG + chr8_4:20506898-20506917 Msa1318460:CDS 50.0%
AATGTAGGTGCTCCTTCTGG+GGG + chr8_4:20506899-20506918 Msa1318460:CDS 50.0%
! CTTCCTTTTGGCAGGTTCAC+CGG - chr8_4:20506936-20506955 None:intergenic 50.0%
!!! TGTTGTTTTTTCCCGGACCC+TGG - chr8_4:20507076-20507095 None:intergenic 50.0%
TAAGTGAAATGGGCCAGTCC+AGG + chr8_4:20508060-20508079 Msa1318460:intron 50.0%
TAATAAGGCCTAGCCTGGAC+TGG - chr8_4:20508076-20508095 None:intergenic 50.0%
ATAGGTCAAGAGGCCTCTTC+GGG - chr8_4:20508393-20508412 None:intergenic 50.0%
!! TGAGGCCTTTAGGGTGTGTT+TGG + chr8_4:20508677-20508696 Msa1318460:intron 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr8_4:20508700-20508719 Msa1318460:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr8_4:20508701-20508720 Msa1318460:intron 50.0%
! GGTTTGACCTCTAGTTCAGC+TGG + chr8_4:20509471-20509490 Msa1318460:CDS 50.0%
CACAGTAGAGACAGCACCAT+TGG - chr8_4:20510350-20510369 None:intergenic 50.0%
CTTTGTCAGGCTTCGACATC+TGG + chr8_4:20510373-20510392 Msa1318460:CDS 50.0%
TTGTCAGGCTTCGACATCTG+GGG + chr8_4:20510375-20510394 Msa1318460:CDS 50.0%
TGGGGGTTCTGTCACATATG+AGG + chr8_4:20510393-20510412 Msa1318460:CDS 50.0%
AAGCCTGACAGGCTCTTACT+TGG + chr8_4:20510831-20510850 Msa1318460:CDS 50.0%
CAACCAAGTAAGAGCCTGTC+AGG - chr8_4:20510837-20510856 None:intergenic 50.0%
GTTTCTCTTGCCAGTCCTGA+TGG + chr8_4:20510898-20510917 Msa1318460:CDS 50.0%
AATGACACGACCATCAGGAC+TGG - chr8_4:20510911-20510930 None:intergenic 50.0%
AGTCCTGATGGTCGTGTCAT+TGG + chr8_4:20510910-20510929 Msa1318460:CDS 50.0%
CATTGCTGCAAGTCCTGTTC+AGG + chr8_4:20510954-20510973 Msa1318460:CDS 50.0%
ATATCCAATGGACGCGATGC+AGG - chr8_4:20511660-20511679 None:intergenic 50.0%
AGGGCTTGAAGTTCTTGGAG+AGG + chr8_4:20512042-20512061 Msa1318460:three_prime_UTR 50.0%
ATCCAGGGAAAACCTAGACC+GGG + chr8_4:20512168-20512187 Msa1318460:three_prime_UTR 50.0%
! TGGTGGTGTGACTGTGAGAG+TGG + chr8_4:20505895-20505914 Msa1318460:intron 55.0%
CATGGATCGAGGGGACCAAA+TGG + chr8_4:20506682-20506701 Msa1318460:exon 55.0%
CAACCGGTGAACCTGCCAAA+AGG + chr8_4:20506930-20506949 Msa1318460:CDS 55.0%
GAACCTGCCAAAAGGAAGCG+TGG + chr8_4:20506938-20506957 Msa1318460:CDS 55.0%
! CTTCCACGCTTCCTTTTGGC+AGG - chr8_4:20506944-20506963 None:intergenic 55.0%
! CTGCCAAAAGGAAGCGTGGA+AGG + chr8_4:20506942-20506961 Msa1318460:CDS 55.0%
! AGGCCTTCCACGCTTCCTTT+TGG - chr8_4:20506948-20506967 None:intergenic 55.0%
! GCGTTTCTGGACTTGCGGTA+CGG - chr8_4:20507038-20507057 None:intergenic 55.0%
GTACCGCAAGTCCAGAAACG+CGG + chr8_4:20507037-20507056 Msa1318460:CDS 55.0%
AAGTCCAGAAACGCGGTCGA+GGG + chr8_4:20507044-20507063 Msa1318460:CDS 55.0%
!!! GTTTTTTCCCGGACCCTGGA+GGG - chr8_4:20507072-20507091 None:intergenic 55.0%
!!! TGTTTTTTCCCGGACCCTGG+AGG - chr8_4:20507073-20507092 None:intergenic 55.0%
GGCTGTCCCAAACCTAACCT+AGG - chr8_4:20508364-20508383 None:intergenic 55.0%
GACAGCCTATAAGCCCGAAG+AGG + chr8_4:20508377-20508396 Msa1318460:intron 55.0%
AGAGGCCTCTTCGGGCTTAT+AGG - chr8_4:20508385-20508404 None:intergenic 55.0%
! AGGGGTGCGAATAGGTCAAG+AGG - chr8_4:20508403-20508422 None:intergenic 55.0%
CGCACCCCTAATTTGGATGC+AGG + chr8_4:20508414-20508433 Msa1318460:intron 55.0%
CACGTACACATATCGGGCAC+TGG - chr8_4:20509864-20509883 None:intergenic 55.0%
CAGTGCCCGATATGTGTACG+TGG + chr8_4:20509862-20509881 Msa1318460:intron 55.0%
TGTCAGGCTTCGACATCTGG+GGG + chr8_4:20510376-20510395 Msa1318460:CDS 55.0%
CGATGGCTCGCGTAATCGAA+CGG + chr8_4:20510864-20510883 Msa1318460:CDS 55.0%
GATGGCTCGCGTAATCGAAC+GGG + chr8_4:20510865-20510884 Msa1318460:CDS 55.0%
CCACCAATGACACGACCATC+AGG - chr8_4:20510916-20510935 None:intergenic 55.0%
! CCTGATGGTCGTGTCATTGG+TGG + chr8_4:20510913-20510932 Msa1318460:CDS 55.0%
! GATGGTCGTGTCATTGGTGG+AGG + chr8_4:20510916-20510935 Msa1318460:CDS 55.0%
! ATCGGGAGCTTTATGTGGGG+TGG + chr8_4:20511486-20511505 Msa1318460:CDS 55.0%
! AACCCGGTCTAGGTTTTCCC+TGG - chr8_4:20512173-20512192 None:intergenic 55.0%
GGATCGAGGGGACCAAATGG+CGG + chr8_4:20506685-20506704 Msa1318460:CDS 60.0%
GTTGAAGCAGCACCCCCAGA+AGG - chr8_4:20506914-20506933 None:intergenic 60.0%
!! TCTGGGGGTGCTGCTTCAAC+CGG + chr8_4:20506914-20506933 Msa1318460:CDS 60.0%
!! CCAGGATGGCTTGCTGGTGT+TGG - chr8_4:20507013-20507032 None:intergenic 60.0%
CCAACACCAGCAAGCCATCC+TGG + chr8_4:20507010-20507029 Msa1318460:CDS 60.0%
! ACGGTTCCAGGATGGCTTGC+TGG - chr8_4:20507019-20507038 None:intergenic 60.0%
CTTGCGGTACGGTTCCAGGA+TGG - chr8_4:20507027-20507046 None:intergenic 60.0%
TGGACTTGCGGTACGGTTCC+AGG - chr8_4:20507031-20507050 None:intergenic 60.0%
! CGACCGCGTTTCTGGACTTG+CGG - chr8_4:20507043-20507062 None:intergenic 60.0%
CAAGTCCAGAAACGCGGTCG+AGG + chr8_4:20507043-20507062 Msa1318460:CDS 60.0%
ATGGGGGCTGTGCACAGAAG+TGG + chr8_4:20507372-20507391 Msa1318460:intron 60.0%
GAAATGGGCCAGTCCAGGCT+AGG + chr8_4:20508065-20508084 Msa1318460:intron 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr8_4:20508704-20508723 Msa1318460:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr8_4:20508705-20508724 Msa1318460:intron 60.0%
! CGTGTCATTGGTGGAGGCGT+CGG + chr8_4:20510922-20510941 Msa1318460:CDS 60.0%
TTGGCCTGCATCGCGTCCAT+TGG + chr8_4:20511653-20511672 Msa1318460:CDS 60.0%
! CAAGGGTATGTCGCGACTCG+TGG + chr8_4:20511954-20511973 Msa1318460:three_prime_UTR 60.0%
TAGGAGGGGAAGGGAGGGCA+AGG + chr8_4:20508710-20508729 Msa1318460:intron 65.0%
!! GTCATTGGTGGAGGCGTCGG+TGG + chr8_4:20510925-20510944 Msa1318460:CDS 65.0%
GGCGCCCTCGACCGCGTTTC+TGG - chr8_4:20507051-20507070 None:intergenic 75.0%
!!! GCGGTCGAGGGCGCCCTCCA+GGG + chr8_4:20507056-20507075 Msa1318460:CDS 80.0%
!!! CGAGGGCGCCCTCCAGGGTC+CGG + chr8_4:20507061-20507080 Msa1318460:CDS 80.0%
!!! GAGGGCGCCCTCCAGGGTCC+GGG + chr8_4:20507062-20507081 Msa1318460:CDS 80.0%
!!! CGCGGTCGAGGGCGCCCTCC+AGG + chr8_4:20507055-20507074 Msa1318460:CDS 85.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 20505125 20512226 20505125 ID=Msa1318460;Name=Msa1318460
chr8_4 mRNA 20505125 20512226 20505125 ID=Msa1318460-mRNA-1;Parent=Msa1318460;Name=Msa1318460-mRNA-1;_AED=0.05;_eAED=0.05;_QI=535|1|1|1|0.8|0.66|6|507|342
chr8_4 exon 20505125 20505570 20505125 ID=Msa1318460-mRNA-1:exon:7519;Parent=Msa1318460-mRNA-1
chr8_4 exon 20506594 20507109 20506594 ID=Msa1318460-mRNA-1:exon:7520;Parent=Msa1318460-mRNA-1
chr8_4 exon 20509469 20509536 20509469 ID=Msa1318460-mRNA-1:exon:7521;Parent=Msa1318460-mRNA-1
chr8_4 exon 20510283 20510414 20510283 ID=Msa1318460-mRNA-1:exon:7522;Parent=Msa1318460-mRNA-1
chr8_4 exon 20510814 20510975 20510814 ID=Msa1318460-mRNA-1:exon:7523;Parent=Msa1318460-mRNA-1
chr8_4 exon 20511480 20512226 20511480 ID=Msa1318460-mRNA-1:exon:7524;Parent=Msa1318460-mRNA-1
chr8_4 five_prime_UTR 20505125 20505570 20505125 ID=Msa1318460-mRNA-1:five_prime_utr;Parent=Msa1318460-mRNA-1
chr8_4 five_prime_UTR 20506594 20506682 20506594 ID=Msa1318460-mRNA-1:five_prime_utr;Parent=Msa1318460-mRNA-1
chr8_4 CDS 20506683 20507109 20506683 ID=Msa1318460-mRNA-1:cds;Parent=Msa1318460-mRNA-1
chr8_4 CDS 20509469 20509536 20509469 ID=Msa1318460-mRNA-1:cds;Parent=Msa1318460-mRNA-1
chr8_4 CDS 20510283 20510414 20510283 ID=Msa1318460-mRNA-1:cds;Parent=Msa1318460-mRNA-1
chr8_4 CDS 20510814 20510975 20510814 ID=Msa1318460-mRNA-1:cds;Parent=Msa1318460-mRNA-1
chr8_4 CDS 20511480 20511719 20511480 ID=Msa1318460-mRNA-1:cds;Parent=Msa1318460-mRNA-1
chr8_4 three_prime_UTR 20511720 20512226 20511720 ID=Msa1318460-mRNA-1:three_prime_utr;Parent=Msa1318460-mRNA-1
Gene Sequence

>Msa1318460

ATGGATCGAGGGGACCAAATGGCGGCATTATCCGGTTCTGCATCATACTTTATGCAGAGAGGATTACCTGGTTCTGGAAACCAACATGAATTGCATAATTCCCCTGGTATTCGTCCGCTGAATACCAATTCATCGTTTCAATCAAGTATTGGTGGTGGTGGTACTATTGGATCCACGATGCCGATGGATTCTTCTGGAATTGGATCTCAATGTATCAATGTAGGTGCTCCTTCTGGGGGTGCTGCTTCAACCGGTGAACCTGCCAAAAGGAAGCGTGGAAGGCCTAGAAAATATGGGGCAGATGGAAGTGTGTCGTTAGCATTGACTCCAACACCAGCAAGCCATCCTGGAACCGTACCGCAAGTCCAGAAACGCGGTCGAGGGCGCCCTCCAGGGTCCGGGAAAAAACAACAGTTGGCTTCTTTCGGTGGTTTGACCTCTAGTTCAGCTGGAAATGGTTTCACTCCTCATGTCATCTCCATTGCAATTGGAGAAGACATTGCAACAAAAATTCTGGCATTTTCTCAGCAGGGACCTAGAACTATATTTGTTATGTCGGCCAATGGTGCTGTCTCTACTGTGACACTTTGTCAGGCTTCGACATCTGGGGGTTCTGTCACATATGAGGGGCGTTTCGAGATACTAAGCCTGACAGGCTCTTACTTGGTTGCTGATAACGATGGCTCGCGTAATCGAACGGGTTCATTAAGTGTTTCTCTTGCCAGTCCTGATGGTCGTGTCATTGGTGGAGGCGTCGGTGGATTGCTCATTGCTGCAAGTCCTGTTCAGGTGATAATCGGGAGCTTTATGTGGGGTGGACCAAAAACCAAGAACAAGAAGAATGAAGATTCAGAAGATCAAGAAGTTGGTGTAGAGGAAAATCATCATCATGGAGTTCATAATCCAGTTGCAATGAATAGCATTTCACCAAATCAAAGTCTGACTCCAACATCTCTCAATTCTTGGCCTGCATCGCGTCCATTGGATATGCGTAATTCCCATATGGACATTGATTTAATGCGTGGGTGA
Protein sequence

>Msa1318460

MDRGDQMAALSGSASYFMQRGLPGSGNQHELHNSPGIRPLNTNSSFQSSIGGGGTIGSTMPMDSSGIGSQCINVGAPSGGAASTGEPAKRKRGRPRKYGADGSVSLALTPTPASHPGTVPQVQKRGRGRPPGSGKKQQLASFGGLTSSSAGNGFTPHVISIAIGEDIATKILAFSQQGPRTIFVMSANGAVSTVTLCQASTSGGSVTYEGRFEILSLTGSYLVADNDGSRNRTGSLSVSLASPDGRVIGGGVGGLLIAASPVQVIIGSFMWGGPKTKNKKNEDSEDQEVGVEENHHHGVHNPVAMNSISPNQSLTPTSLNSWPASRPLDMRNSHMDIDLMRG*