Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880800 | XP_003609751.2 | 98.377 | 924 | 15 | 0 | 1 | 924 | 1 | 924 | 0.0 | 1905 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880800 | sp|O23463|CMTA5_ARATH | 57.235 | 933 | 370 | 10 | 3 | 917 | 1 | 922 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880800 | G7JMT3 | 98.377 | 924 | 15 | 0 | 1 | 924 | 1 | 924 | 0.0 | 1905 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0880800 | TF | CAMTA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0082260 | Msa0880800 | 0.809372 | 1.954525e-50 | -8.615850e-47 |
| Msa0174790 | Msa0880800 | 0.810872 | 9.285231e-51 | -8.615850e-47 |
| Msa0430830 | Msa0880800 | 0.804316 | 2.290756e-49 | -8.615850e-47 |
| Msa0282780 | Msa0880800 | 0.825211 | 5.303652e-54 | -8.615850e-47 |
| Msa0880800 | Msa1175100 | 0.810129 | 1.343823e-50 | -8.615850e-47 |
| Msa0880800 | Msa1218570 | 0.998979 | 1.959056e-284 | -8.615850e-47 |
| Msa0880800 | Msa1234470 | 0.809474 | 1.858756e-50 | -8.615850e-47 |
| Msa0880800 | Msa1283810 | 0.806260 | 8.967955e-50 | -8.615850e-47 |
| Msa0880800 | Msa1306960 | 0.808646 | 2.795629e-50 | -8.615850e-47 |
| Msa0880800 | Msa1322680 | 0.812761 | 3.602724e-51 | -8.615850e-47 |
| Msa0880800 | Msa1322720 | 0.807291 | 5.429681e-50 | -8.615850e-47 |
| Msa0880800 | Msa1370840 | 0.810764 | 9.800099e-51 | -8.615850e-47 |
| Msa0880800 | Msa1436590 | 0.996628 | 4.957993e-230 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880800 | MtrunA17_Chr4g0068161 | 98.377 | 924 | 15 | 0 | 1 | 924 | 1 | 924 | 0.0 | 1905 |
| Msa0880800 | MtrunA17_Chr2g0294711 | 71.227 | 921 | 252 | 3 | 1 | 920 | 1 | 909 | 0.0 | 1365 |
| Msa0880800 | MtrunA17_Chr2g0279141 | 31.176 | 1020 | 556 | 25 | 25 | 917 | 13 | 1013 | 4.70e-132 | 422 |
| Msa0880800 | MtrunA17_Chr8g0382191 | 32.857 | 630 | 388 | 13 | 310 | 910 | 432 | 1055 | 4.29e-91 | 312 |
| Msa0880800 | MtrunA17_Chr8g0382191 | 55.725 | 131 | 58 | 0 | 25 | 155 | 9 | 139 | 3.50e-41 | 164 |
| Msa0880800 | MtrunA17_Chr8g0377501 | 35.126 | 595 | 323 | 19 | 338 | 907 | 387 | 943 | 2.42e-84 | 291 |
| Msa0880800 | MtrunA17_Chr8g0377501 | 48.276 | 145 | 73 | 1 | 24 | 166 | 13 | 157 | 5.55e-39 | 157 |
| Msa0880800 | MtrunA17_Chr4g0050401 | 32.039 | 618 | 362 | 15 | 316 | 897 | 386 | 981 | 2.30e-79 | 278 |
| Msa0880800 | MtrunA17_Chr4g0050401 | 54.032 | 124 | 57 | 0 | 25 | 148 | 13 | 136 | 7.66e-37 | 150 |
| Msa0880800 | MtrunA17_Chr3g0122351 | 33.167 | 603 | 338 | 17 | 347 | 919 | 368 | 935 | 5.49e-78 | 273 |
| Msa0880800 | MtrunA17_Chr3g0122351 | 52.419 | 124 | 59 | 0 | 26 | 149 | 8 | 131 | 6.71e-38 | 153 |
| Msa0880800 | MtrunA17_Chr8g0382181 | 45.192 | 104 | 54 | 1 | 67 | 170 | 8 | 108 | 1.15e-22 | 102 |
| Msa0880800 | MtrunA17_Chr8g0382181 | 31.522 | 92 | 63 | 0 | 367 | 458 | 374 | 465 | 5.94e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880800 | AT3G16940.1 | 55.827 | 901 | 327 | 8 | 9 | 907 | 7 | 838 | 0.0 | 983 |
| Msa0880800 | AT3G16940.3 | 55.227 | 880 | 323 | 8 | 30 | 907 | 1 | 811 | 0.0 | 944 |
| Msa0880800 | AT3G16940.2 | 54.523 | 796 | 296 | 7 | 9 | 802 | 7 | 738 | 0.0 | 840 |
| Msa0880800 | AT5G09410.1 | 31.038 | 944 | 559 | 16 | 25 | 897 | 16 | 938 | 1.45e-130 | 417 |
| Msa0880800 | AT5G09410.3 | 30.155 | 965 | 558 | 17 | 25 | 897 | 75 | 1015 | 2.59e-121 | 395 |
| Msa0880800 | AT2G22300.3 | 35.072 | 556 | 336 | 9 | 367 | 916 | 402 | 938 | 1.85e-89 | 306 |
| Msa0880800 | AT2G22300.3 | 69.231 | 78 | 24 | 0 | 71 | 148 | 1 | 78 | 7.92e-29 | 125 |
| Msa0880800 | AT2G22300.2 | 35.072 | 556 | 336 | 9 | 367 | 916 | 460 | 996 | 3.77e-89 | 306 |
| Msa0880800 | AT2G22300.2 | 57.778 | 135 | 57 | 0 | 14 | 148 | 2 | 136 | 1.62e-44 | 175 |
| Msa0880800 | AT2G22300.1 | 35.072 | 556 | 336 | 9 | 367 | 916 | 460 | 996 | 3.77e-89 | 306 |
| Msa0880800 | AT2G22300.1 | 57.778 | 135 | 57 | 0 | 14 | 148 | 2 | 136 | 1.62e-44 | 175 |
| Msa0880800 | AT5G09410.4 | 30.556 | 612 | 388 | 9 | 314 | 897 | 233 | 835 | 3.46e-80 | 279 |
| Msa0880800 | AT5G64220.1 | 31.046 | 612 | 378 | 11 | 314 | 897 | 403 | 998 | 1.09e-79 | 280 |
| Msa0880800 | AT5G64220.1 | 48.370 | 184 | 77 | 2 | 25 | 193 | 13 | 193 | 2.51e-44 | 174 |
| Msa0880800 | AT5G64220.2 | 31.046 | 612 | 378 | 11 | 314 | 897 | 403 | 998 | 1.09e-79 | 280 |
| Msa0880800 | AT5G64220.2 | 48.370 | 184 | 77 | 2 | 25 | 193 | 13 | 193 | 2.51e-44 | 174 |
| Msa0880800 | AT5G09410.2 | 30.556 | 612 | 388 | 9 | 314 | 897 | 354 | 956 | 1.76e-79 | 279 |
| Msa0880800 | AT5G09410.2 | 50.000 | 168 | 73 | 2 | 25 | 181 | 16 | 183 | 2.07e-40 | 162 |
| Msa0880800 | AT1G67310.1 | 33.059 | 608 | 345 | 16 | 350 | 919 | 415 | 998 | 1.95e-71 | 256 |
| Msa0880800 | AT1G67310.1 | 47.287 | 129 | 68 | 0 | 21 | 149 | 32 | 160 | 3.50e-36 | 148 |
Find 250 sgRNAs with CRISPR-Local
Find 639 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCTCTGTTTGTAACTTTA+AGG | -0.008543 | 6_1:-27654536 | None:intergenic |
| TAACATCTACGAACAAAATT+TGG | 0.072421 | 6_1:-27647413 | None:intergenic |
| CATCCATTTGTGTGCAATTT+TGG | 0.104350 | 6_1:+27651198 | Msa0880800:CDS |
| GTCATTGACCAAAGTGTTTA+AGG | 0.109944 | 6_1:-27649962 | None:intergenic |
| GGAAATAAATGATGTCTTTA+AGG | 0.133359 | 6_1:-27651005 | None:intergenic |
| CTAGATTTCCGGGATAAATT+TGG | 0.178425 | 6_1:+27651265 | Msa0880800:CDS |
| TTACTACCTTTGCTTGATTA+AGG | 0.188541 | 6_1:-27655201 | None:intergenic |
| ATCTCTAATGTTTGTTGTTA+TGG | 0.193758 | 6_1:+27655754 | Msa0880800:three_prime_UTR |
| CAGGCTTATCGCTAGATTTC+CGG | 0.196850 | 6_1:+27651254 | Msa0880800:CDS |
| ATACAATGCAGGCTGCTTTC+AGG | 0.201311 | 6_1:+27654897 | Msa0880800:intron |
| GCATCTTTAGCTTGCGAAAA+TGG | 0.246405 | 6_1:-27651073 | None:intergenic |
| AAAAGCTAAAAGCAGGAAAA+TGG | 0.263388 | 6_1:+27655788 | Msa0880800:three_prime_UTR |
| GTAAGGTTCTCGGAATTTAC+TGG | 0.269930 | 6_1:-27654421 | None:intergenic |
| CTTGAATCTTGATAGCTTGA+TGG | 0.274270 | 6_1:-27654723 | None:intergenic |
| CCAAAGATAGTAGTAGTATA+TGG | 0.285002 | 6_1:+27655555 | Msa0880800:three_prime_UTR |
| TTGTGTCTTCAGGGAGAAAA+TGG | 0.285192 | 6_1:+27654186 | Msa0880800:intron |
| GCATGATCCAGTAGCTTCTA+TGG | 0.288531 | 6_1:+27650850 | Msa0880800:CDS |
| AATCTCTACTTGAGCTTTGA+TGG | 0.290115 | 6_1:+27650776 | Msa0880800:CDS |
| AGGATGGGGTCTACCGTTGC+TGG | 0.297900 | 6_1:+27650726 | Msa0880800:CDS |
| TGTAGTAGAGTTTGAATTTA+CGG | 0.298703 | 6_1:-27648856 | None:intergenic |
| GCTCGTGAAGCCTCAGTTCA+TGG | 0.300887 | 6_1:-27649412 | None:intergenic |
| TCAGTTGATGATTCTGCTCT+TGG | 0.301849 | 6_1:+27650048 | Msa0880800:CDS |
| TATTCTGTTTATTGAACTTT+GGG | 0.313965 | 6_1:-27655526 | None:intergenic |
| CACAGTTGGACCTCGAAAAC+TGG | 0.322732 | 6_1:+27655607 | Msa0880800:three_prime_UTR |
| GTAAGATTAAATACTTGTTC+TGG | 0.324933 | 6_1:-27650138 | None:intergenic |
| CACACATTAGATTGGACTTT+GGG | 0.329782 | 6_1:-27650667 | None:intergenic |
| CTATTCTGTTTATTGAACTT+TGG | 0.336960 | 6_1:-27655527 | None:intergenic |
| TACTACCTTTGCTTGATTAA+GGG | 0.341554 | 6_1:-27655200 | None:intergenic |
| TTTGAATTTACGGGAGTGAT+TGG | 0.343053 | 6_1:-27648846 | None:intergenic |
| AGAAAGCGCAAGAAGATTAT+AGG | 0.344611 | 6_1:+27655164 | Msa0880800:CDS |
| GTTGCAACTTTGCTGTCAGC+TGG | 0.345081 | 6_1:+27654208 | Msa0880800:CDS |
| ACTTCTCTCGACACGTTCTT+CGG | 0.345176 | 6_1:-27655110 | None:intergenic |
| CCTCGATGTTGCGAGCATTA+TGG | 0.346860 | 6_1:+27646633 | Msa0880800:CDS |
| AAAGTAACAACTTGGCTGAT+AGG | 0.349913 | 6_1:-27650806 | None:intergenic |
| AAGGGGAATCAGACATGATT+TGG | 0.351252 | 6_1:-27650023 | None:intergenic |
| AACATCTACGAACAAAATTT+GGG | 0.354515 | 6_1:-27647412 | None:intergenic |
| CATCATTTATTTCCAATACT+TGG | 0.356488 | 6_1:+27651014 | Msa0880800:CDS |
| GTTTGTTGTTATGGTACATT+TGG | 0.357374 | 6_1:+27655763 | Msa0880800:three_prime_UTR |
| CTTCTTTAATATCCTTTCAT+TGG | 0.358819 | 6_1:+27655482 | Msa0880800:three_prime_UTR |
| AACCTCTGAAGATTATAATC+AGG | 0.360208 | 6_1:-27646012 | None:intergenic |
| CTGTCAGAAGAAATAGATTC+AGG | 0.364565 | 6_1:+27648906 | Msa0880800:CDS |
| TTGGATGGACGGCTCTTCAT+TGG | 0.365957 | 6_1:+27651284 | Msa0880800:CDS |
| CACAGACCTCTTGTGTTTCA+CGG | 0.368339 | 6_1:-27647599 | None:intergenic |
| CAAGCTAAAGATGCCCTGTT+TGG | 0.370069 | 6_1:+27651082 | Msa0880800:CDS |
| AACAATATCGTAAAATCATT+TGG | 0.371099 | 6_1:+27654936 | Msa0880800:CDS |
| CTTCATTGGGCAGCATATTA+CGG | 0.371986 | 6_1:+27651298 | Msa0880800:CDS |
| CTGGGTACCACCGCATTCTC+CGG | 0.372817 | 6_1:+27650745 | Msa0880800:CDS |
| GTAGTAGAGTTTGAATTTAC+GGG | 0.373399 | 6_1:-27648855 | None:intergenic |
| AGGCTTATCGCTAGATTTCC+GGG | 0.376462 | 6_1:+27651255 | Msa0880800:CDS |
| GCTTAATACCGAGGAAGAAT+CGG | 0.378006 | 6_1:+27655027 | Msa0880800:CDS |
| ATTCATTGGCTTGACATTGA+TGG | 0.378984 | 6_1:-27646725 | None:intergenic |
| GAACAAGGACGATGTGTTCC+AGG | 0.379575 | 6_1:-27647572 | None:intergenic |
| AACTTACCGGGTCAACTTGT+TGG | 0.380648 | 6_1:+27646056 | Msa0880800:CDS |
| CCATATACTACTACTATCTT+TGG | 0.381257 | 6_1:-27655555 | None:intergenic |
| GATGATGGCAAATAACTTAC+CGG | 0.382750 | 6_1:+27646043 | Msa0880800:CDS |
| TTAGAAAAGATGGGCACAAC+TGG | 0.386039 | 6_1:+27647169 | Msa0880800:CDS |
| AATTTCTGCAGATGCATTGT+TGG | 0.386177 | 6_1:-27649791 | None:intergenic |
| TTCCTTTGTGCAGCTGGAAC+GGG | 0.387086 | 6_1:+27655304 | Msa0880800:intron |
| TCTGCTCTGTTCGGATTGAT+TGG | 0.387618 | 6_1:-27645859 | None:intergenic |
| CATTAAGTATTGCCAAGTAT+TGG | 0.389662 | 6_1:-27651026 | None:intergenic |
| ACGAGCTTAATACACTTGAA+TGG | 0.394137 | 6_1:+27649429 | Msa0880800:CDS |
| GTTGGATCCGTGACCAAGTT+TGG | 0.394480 | 6_1:-27654238 | None:intergenic |
| AAGATACACTGGCAGCTTAC+CGG | 0.401008 | 6_1:+27654464 | Msa0880800:CDS |
| CTGCTGCATCGGCAGCTGTC+CGG | 0.405371 | 6_1:-27654483 | None:intergenic |
| TGGCTTAGCAGCTTATCTTT+CGG | 0.408505 | 6_1:+27654318 | Msa0880800:CDS |
| CTTCGGAACTTTAGAAAAGA+TGG | 0.410510 | 6_1:+27647159 | Msa0880800:CDS |
| TATTGCTCACTGCAATTGGC+TGG | 0.411882 | 6_1:-27649834 | None:intergenic |
| TTCAATGACATGAGCTTAGC+TGG | 0.412581 | 6_1:+27654361 | Msa0880800:CDS |
| CAAAGATAGTAGTAGTATAT+GGG | 0.415662 | 6_1:+27655556 | Msa0880800:three_prime_UTR |
| TGTTCCTGCAGAAATTGTTC+AGG | 0.416056 | 6_1:+27650706 | Msa0880800:CDS |
| TTGCAAAGTCAGGACAGCTT+TGG | 0.419514 | 6_1:+27649988 | Msa0880800:CDS |
| AAAGCTAAAAGCAGGAAAAT+GGG | 0.422038 | 6_1:+27655789 | Msa0880800:three_prime_UTR |
| TTCTCTTCCATAGAAGCTAC+TGG | 0.423128 | 6_1:-27650857 | None:intergenic |
| CTATGGAAGAGAAGAACAAC+TGG | 0.423755 | 6_1:+27650867 | Msa0880800:CDS |
| GATAAGACAAAGACAATAGA+AGG | 0.424496 | 6_1:+27645760 | None:intergenic |
| ATTCCAAAATTGCACACAAA+TGG | 0.426542 | 6_1:-27651201 | None:intergenic |
| CGTAAAATCATTTGGTCAGT+TGG | 0.427825 | 6_1:+27654944 | Msa0880800:CDS |
| CGAGCTTAATACACTTGAAT+GGG | 0.429815 | 6_1:+27649430 | Msa0880800:CDS |
| AAGCATGGCATGAATCTCAT+TGG | 0.433333 | 6_1:-27646683 | None:intergenic |
| GGGACCAAAACTGCATATGC+TGG | 0.433437 | 6_1:+27648927 | Msa0880800:CDS |
| GTTAATTATTTAAGATATGC+TGG | 0.434933 | 6_1:-27655690 | None:intergenic |
| GCTACTGGATCATGCAAAAC+AGG | 0.435079 | 6_1:-27650842 | None:intergenic |
| CGCTGATCTTGCTTATACGA+GGG | 0.436160 | 6_1:+27654288 | Msa0880800:CDS |
| TCCACTACCAGAGATGAATA+TGG | 0.438348 | 6_1:-27650096 | None:intergenic |
| CAACTTGGCTGATAGGGTTA+TGG | 0.443521 | 6_1:-27650799 | None:intergenic |
| ACACACATTAGATTGGACTT+TGG | 0.444268 | 6_1:-27650668 | None:intergenic |
| TGGCTCATGATACAGTTTCA+GGG | 0.447890 | 6_1:+27648819 | Msa0880800:intron |
| CTGCTCCTCGGTAAGGTTCT+CGG | 0.448811 | 6_1:-27654431 | None:intergenic |
| ATACTATTGCTCACTGCAAT+TGG | 0.451657 | 6_1:-27649838 | None:intergenic |
| GCGTTGGCGTTTAAAGAGAA+AGG | 0.452827 | 6_1:+27654988 | Msa0880800:CDS |
| TCTCTATTTCCTTGCACAGT+TGG | 0.459324 | 6_1:+27655593 | Msa0880800:three_prime_UTR |
| AAGTAACAACTTGGCTGATA+GGG | 0.459430 | 6_1:-27650805 | None:intergenic |
| TGTTTGACCGCAAGATGCTT+CGG | 0.463262 | 6_1:+27647142 | Msa0880800:CDS |
| CTTGTTGGATCAGAGATACA+TGG | 0.467564 | 6_1:+27646071 | Msa0880800:CDS |
| ACCACATACACACATTAGAT+TGG | 0.467840 | 6_1:-27650675 | None:intergenic |
| CTTAATACCGAGGAAGAATC+GGG | 0.468527 | 6_1:+27655028 | Msa0880800:CDS |
| AGAGAAGGGTCTGCTCTGTT+CGG | 0.470517 | 6_1:-27645868 | None:intergenic |
| AATATCCTTTCATTGGCGAT+TGG | 0.471441 | 6_1:+27655489 | Msa0880800:three_prime_UTR |
| AACTTTGGGACGGCATATAG+AGG | 0.471798 | 6_1:-27655512 | None:intergenic |
| CTTCAGACAATTAGCAATCA+AGG | 0.472262 | 6_1:+27649889 | Msa0880800:CDS |
| ATTAAATACTTGTTCTGGAA+GGG | 0.472785 | 6_1:-27650133 | None:intergenic |
| TTGCAACTTTGCTGTCAGCT+GGG | 0.472793 | 6_1:+27654209 | Msa0880800:CDS |
| ATGCAGAGGAGGAATTCTTT+CGG | 0.473903 | 6_1:+27655071 | Msa0880800:CDS |
| CTGCAGAAATTGTTCAGGAT+GGG | 0.477098 | 6_1:+27650711 | Msa0880800:CDS |
| TGGATGGACGGCTCTTCATT+GGG | 0.477645 | 6_1:+27651285 | Msa0880800:CDS |
| AGCTGGGGCAAAGCCAAACT+TGG | 0.480001 | 6_1:+27654225 | Msa0880800:CDS |
| GACAGAATCCATGGTGCAGA+TGG | 0.481590 | 6_1:-27648888 | None:intergenic |
| TGGAAATATCAGTGGCTCAC+TGG | 0.481619 | 6_1:+27654381 | Msa0880800:CDS |
| TAATGAACCATATTCATCTC+TGG | 0.490693 | 6_1:+27650089 | Msa0880800:CDS |
| CTGATCTCCCGATTCTTCCT+CGG | 0.494626 | 6_1:-27655035 | None:intergenic |
| TACTGATGTGTCCCCTGCGT+GGG | 0.495048 | 6_1:+27650158 | Msa0880800:CDS |
| GTCAGGACAGCTTTGGAATG+TGG | 0.495726 | 6_1:+27649995 | Msa0880800:CDS |
| CACGCATACAAGAAGCATAT+AGG | 0.496664 | 6_1:+27654506 | Msa0880800:CDS |
| TGGGTACCACCGCATTCTCC+GGG | 0.502761 | 6_1:+27650746 | Msa0880800:CDS |
| CAATGAAAGGATATTAAAGA+AGG | 0.503209 | 6_1:-27655481 | None:intergenic |
| ATTCCTTTGTGCAGCTGGAA+CGG | 0.503915 | 6_1:+27655303 | Msa0880800:intron |
| TGTTGATTCCTTAAACACTT+TGG | 0.504390 | 6_1:+27649954 | Msa0880800:CDS |
| AGAGGTTTATGCGATGATGA+TGG | 0.505647 | 6_1:+27646028 | Msa0880800:exon |
| TACAACATAGATTCCGTACA+TGG | 0.506906 | 6_1:+27654671 | Msa0880800:CDS |
| ACATGATTAGATTATAGAGA+AGG | 0.509456 | 6_1:-27645883 | None:intergenic |
| CTTTGTCTCAAAATTGCGGA+AGG | 0.510652 | 6_1:-27654623 | None:intergenic |
| CATAGAGCTGCTCCTCGGTA+AGG | 0.512844 | 6_1:-27654438 | None:intergenic |
| GCTTATACGAGGGGTTATCA+TGG | 0.514631 | 6_1:+27654298 | Msa0880800:CDS |
| CTTCTTGCGCTTTCTTAGAA+CGG | 0.515603 | 6_1:-27655156 | None:intergenic |
| AGATGAATATGGTTCATTAA+CGG | 0.515829 | 6_1:-27650085 | None:intergenic |
| CCGGGATAAATTTGGATGGA+CGG | 0.516036 | 6_1:+27651273 | Msa0880800:CDS |
| AGCATGGCATGAATCTCATT+GGG | 0.516702 | 6_1:-27646682 | None:intergenic |
| CATGATTAGATTATAGAGAA+GGG | 0.516937 | 6_1:-27645882 | None:intergenic |
| CAATGACAGATTGCAAAGTC+AGG | 0.517201 | 6_1:+27649978 | Msa0880800:CDS |
| ACCATATTCATCTCTGGTAG+TGG | 0.517334 | 6_1:+27650095 | Msa0880800:CDS |
| GATTAAATACTTGTTCTGGA+AGG | 0.517408 | 6_1:-27650134 | None:intergenic |
| CTTTCTTTGTCTCAAAATTG+CGG | 0.517560 | 6_1:-27654627 | None:intergenic |
| GAAAGGGCTTCCGTGGGCTC+CGG | 0.517612 | 6_1:+27655005 | Msa0880800:CDS |
| ATCCAACTCACCAAAACCCT+GGG | 0.517945 | 6_1:+27654254 | Msa0880800:CDS |
| ACGAGTTTCAACTTCAAATG+AGG | 0.518692 | 6_1:+27650891 | Msa0880800:CDS |
| ATCAGGTTGGTAATGAAGAA+AGG | 0.520019 | 6_1:+27647357 | Msa0880800:intron |
| GAGAAGTGTAATACGAGTGC+AGG | 0.521544 | 6_1:+27655126 | Msa0880800:CDS |
| CCTGCAGAAATTGTTCAGGA+TGG | 0.524642 | 6_1:+27650710 | Msa0880800:CDS |
| CATGGATTCCACACATTGCA+AGG | 0.525083 | 6_1:+27646089 | Msa0880800:CDS |
| TTGTATGCGTGCTGCTGCAT+CGG | 0.525543 | 6_1:-27654494 | None:intergenic |
| AGATTATAGGAGGATGAAGT+TGG | 0.526731 | 6_1:+27655177 | Msa0880800:CDS |
| TGCAACTTTGCTGTCAGCTG+GGG | 0.527062 | 6_1:+27654210 | Msa0880800:CDS |
| CGTTGGCGTTTAAAGAGAAA+GGG | 0.527109 | 6_1:+27654989 | Msa0880800:CDS |
| TGCAGAAATTGTTCAGGATG+GGG | 0.527605 | 6_1:+27650712 | Msa0880800:CDS |
| GGACCAAAACTGCATATGCT+GGG | 0.528427 | 6_1:+27648928 | Msa0880800:CDS |
| CCGCTGATCTTGCTTATACG+AGG | 0.533890 | 6_1:+27654287 | Msa0880800:CDS |
| AAGTAGAGATTCACAAATCC+CGG | 0.535140 | 6_1:-27650764 | None:intergenic |
| ACCTCTGAAGATTATAATCA+GGG | 0.539021 | 6_1:-27646011 | None:intergenic |
| TCAGGACAGCTTTGGAATGT+GGG | 0.540299 | 6_1:+27649996 | Msa0880800:CDS |
| ATTTCTTCTGACAGAATCCA+TGG | 0.540689 | 6_1:-27648897 | None:intergenic |
| AGTATCACTTAGCAGACTAA+AGG | 0.541579 | 6_1:+27650967 | Msa0880800:CDS |
| GGATGGGGTCTACCGTTGCT+GGG | 0.542829 | 6_1:+27650727 | Msa0880800:CDS |
| AATCATTTGGTCAGTTGGCG+TGG | 0.546844 | 6_1:+27654949 | Msa0880800:CDS |
| CTCTACGAATCTTCCATGTA+CGG | 0.546988 | 6_1:-27654684 | None:intergenic |
| GAGGAGGAATTCTTTCGGAC+TGG | 0.547668 | 6_1:+27655076 | Msa0880800:CDS |
| TGTCAGAAGAAATAGATTCA+GGG | 0.548424 | 6_1:+27648907 | Msa0880800:CDS |
| ATTGGGCAGCATATTACGGC+AGG | 0.549580 | 6_1:+27651302 | Msa0880800:CDS |
| TTTCGAGGTCCAACTGTGCA+AGG | 0.550268 | 6_1:-27655602 | None:intergenic |
| TTAAAGAGAAAGGGCTTCCG+TGG | 0.557276 | 6_1:+27654998 | Msa0880800:CDS |
| GACCATGTGCATAATATACA+TGG | 0.559880 | 6_1:-27647382 | None:intergenic |
| ATTCTTCCTCGGTATTAAGC+CGG | 0.562168 | 6_1:-27655024 | None:intergenic |
| CTGTTTATTGAACTTTGGGA+CGG | 0.563442 | 6_1:-27655522 | None:intergenic |
| CCATCCTGAACAATTTCTGC+AGG | 0.563606 | 6_1:-27650710 | None:intergenic |
| TCAACACCACTTGAAGAGAC+AGG | 0.563737 | 6_1:-27649937 | None:intergenic |
| ATACTTGTGATTACAAAGCA+TGG | 0.565098 | 6_1:-27646698 | None:intergenic |
| ATTTCCGGGATAAATTTGGA+TGG | 0.565666 | 6_1:+27651269 | Msa0880800:CDS |
| AAGACAATAGAAGGACAGAA+AGG | 0.565998 | 6_1:+27645769 | Msa0880800:five_prime_UTR |
| AACACCTCTGCTGTGCCTAA+CGG | 0.566570 | 6_1:+27649479 | Msa0880800:CDS |
| AGGAATTCTTTCGGACTGGT+AGG | 0.566668 | 6_1:+27655080 | Msa0880800:CDS |
| AAGCTAAAAGCAGGAAAATG+GGG | 0.568330 | 6_1:+27655790 | Msa0880800:three_prime_UTR |
| ATTGCTCACTGCAATTGGCT+GGG | 0.569273 | 6_1:-27649833 | None:intergenic |
| GAATCAGCAAAGTGATGCAG+AGG | 0.570072 | 6_1:+27655057 | Msa0880800:CDS |
| TCAGCAAAGTGATGCAGAGG+AGG | 0.570168 | 6_1:+27655060 | Msa0880800:CDS |
| GCAGAATCATCAACTGAACA+AGG | 0.575288 | 6_1:-27650042 | None:intergenic |
| GATCCAACTCACCAAAACCC+TGG | 0.576628 | 6_1:+27654253 | Msa0880800:CDS |
| TTCGTGCAGATCCTAGTGAC+TGG | 0.577891 | 6_1:+27650617 | Msa0880800:intron |
| TATGAAAGAGTCCAGTCACT+AGG | 0.581151 | 6_1:-27650628 | None:intergenic |
| AGAGGCCAATCGCCAATGAA+AGG | 0.581872 | 6_1:-27655494 | None:intergenic |
| CTGTGGAAGACACCCACGCA+GGG | 0.582346 | 6_1:-27650170 | None:intergenic |
| TTCGGAACTTTAGAAAAGAT+GGG | 0.582890 | 6_1:+27647160 | Msa0880800:CDS |
| AACCATCCTGTCTCTTCAAG+TGG | 0.583378 | 6_1:+27649931 | Msa0880800:CDS |
| TTAGCAGACTAAAGGAGGCA+AGG | 0.584150 | 6_1:+27650975 | Msa0880800:CDS |
| AGCAGAATGTGAAGGCAGGT+TGG | 0.584497 | 6_1:+27655424 | Msa0880800:three_prime_UTR |
| CCGTCCATCCAAATTTATCC+CGG | 0.585048 | 6_1:-27651273 | None:intergenic |
| TAGCAGACTAAAGGAGGCAA+GGG | 0.588948 | 6_1:+27650976 | Msa0880800:CDS |
| TTCCTTAAAGTTACAAACAG+AGG | 0.589046 | 6_1:+27654534 | Msa0880800:CDS |
| AATGAAAGGATATTAAAGAA+GGG | 0.590145 | 6_1:-27655480 | None:intergenic |
| TTGAGAAAGCAGTGTTGCGT+TGG | 0.592228 | 6_1:+27654972 | Msa0880800:CDS |
| ACATTAGATTGGACTTTGGG+AGG | 0.592424 | 6_1:-27650664 | None:intergenic |
| AATCACCATTTACCTCCGTT+AGG | 0.593445 | 6_1:-27649494 | None:intergenic |
| ACCCTGATTATAATCTTCAG+AGG | 0.596070 | 6_1:+27646010 | Msa0880800:five_prime_UTR |
| AAGCGCAAGAAGATTATAGG+AGG | 0.598107 | 6_1:+27655167 | Msa0880800:CDS |
| GTGTTTCACGGTAATGAACA+AGG | 0.598368 | 6_1:-27647587 | None:intergenic |
| ACTCAGCAGAATGTGAAGGC+AGG | 0.600061 | 6_1:+27655420 | Msa0880800:three_prime_UTR |
| ATCACTTAGCAGACTAAAGG+AGG | 0.601189 | 6_1:+27650970 | Msa0880800:CDS |
| CCATGGTGCAGATGGGTCAG+AGG | 0.602933 | 6_1:-27648880 | None:intergenic |
| TTTCAATGCAATTCCAAACA+GGG | 0.604567 | 6_1:-27651095 | None:intergenic |
| GACCAAAACTGCATATGCTG+GGG | 0.606069 | 6_1:+27648929 | Msa0880800:CDS |
| GATACTCAAAAGTAACAACT+TGG | 0.606670 | 6_1:-27650814 | None:intergenic |
| ACAGAATCCATGGTGCAGAT+GGG | 0.607338 | 6_1:-27648887 | None:intergenic |
| TCCAATCTAATGTGTGTATG+TGG | 0.609379 | 6_1:+27650674 | Msa0880800:CDS |
| TTCACAAATCCCGGAGAATG+CGG | 0.610070 | 6_1:-27650755 | None:intergenic |
| GCTGATCTTGCTTATACGAG+GGG | 0.612221 | 6_1:+27654289 | Msa0880800:CDS |
| GGCAAAGCCAAACTTGGTCA+CGG | 0.614024 | 6_1:+27654231 | Msa0880800:CDS |
| AACTGGAGCTTTAAGCACCC+TGG | 0.616292 | 6_1:+27655624 | Msa0880800:three_prime_UTR |
| AAAGATAGTAGTAGTATATG+GGG | 0.616346 | 6_1:+27655557 | Msa0880800:three_prime_UTR |
| CCTCTGACCCATCTGCACCA+TGG | 0.617433 | 6_1:+27648880 | Msa0880800:CDS |
| TAAAGTTCCGAAGCATCTTG+CGG | 0.620816 | 6_1:-27647149 | None:intergenic |
| AGCTTAGCTGGAAATATCAG+TGG | 0.624080 | 6_1:+27654373 | Msa0880800:CDS |
| TCATTACCGTGAAACACAAG+AGG | 0.627907 | 6_1:+27647593 | Msa0880800:CDS |
| GAAGCTTACCTTGCAATGTG+TGG | 0.628537 | 6_1:-27646097 | None:intergenic |
| AGAATCATCAACTGAACAAG+GGG | 0.629791 | 6_1:-27650040 | None:intergenic |
| GCTCTATGTGAAAGATACAC+TGG | 0.629798 | 6_1:+27654453 | Msa0880800:CDS |
| AAGTTGACATGAAAATGAAG+AGG | 0.630398 | 6_1:+27655351 | Msa0880800:CDS |
| TGGAGGAAGCAAGAACGAGA+TGG | 0.631278 | 6_1:+27646653 | Msa0880800:CDS |
| TTACTGATGTGTCCCCTGCG+TGG | 0.631639 | 6_1:+27650157 | Msa0880800:CDS |
| ATAGTAGTAGTATATGGGGA+TGG | 0.632478 | 6_1:+27655561 | Msa0880800:three_prime_UTR |
| GTCTTCCACAGAGAAATCAA+AGG | 0.632840 | 6_1:+27650182 | Msa0880800:CDS |
| TAAAGAGAAAGGGCTTCCGT+GGG | 0.635069 | 6_1:+27654999 | Msa0880800:CDS |
| ACCTCCGTTAGGCACAGCAG+AGG | 0.636051 | 6_1:-27649483 | None:intergenic |
| CGATGTTGCGAGCATTATGG+AGG | 0.637890 | 6_1:+27646636 | Msa0880800:CDS |
| AATGCGGTGGTACCCAGCAA+CGG | 0.638258 | 6_1:-27650739 | None:intergenic |
| ATCCATGTATATTATGCACA+TGG | 0.639136 | 6_1:+27647380 | Msa0880800:CDS |
| CAGAATCATCAACTGAACAA+GGG | 0.639781 | 6_1:-27650041 | None:intergenic |
| GTTGGCCCTTAATCAAGCAA+AGG | 0.646848 | 6_1:+27655195 | Msa0880800:CDS |
| TGGCTCACTGGAAACTAGCA+CGG | 0.646998 | 6_1:+27654393 | Msa0880800:CDS |
| TAAGATCGTTTGCTACGACT+AGG | 0.647975 | 6_1:-27649457 | None:intergenic |
| TTTCACATAGAGCTGCTCCT+CGG | 0.648879 | 6_1:-27654443 | None:intergenic |
| AGCTAAAAGCAGGAAAATGG+GGG | 0.651006 | 6_1:+27655791 | Msa0880800:three_prime_UTR |
| TCTGTGGAAGACACCCACGC+AGG | 0.652477 | 6_1:-27650171 | None:intergenic |
| ATGATGGCAAATAACTTACC+GGG | 0.653975 | 6_1:+27646044 | Msa0880800:CDS |
| GGAAACCTTTGATTTCTCTG+TGG | 0.654481 | 6_1:-27650187 | None:intergenic |
| TTCATTAACGGATGAAACTG+AGG | 0.656620 | 6_1:-27650073 | None:intergenic |
| GCACACTCAGCAGAATGTGA+AGG | 0.657495 | 6_1:+27655416 | Msa0880800:three_prime_UTR |
| ACTACTGAATATGATGCGCA+AGG | 0.659271 | 6_1:+27651166 | Msa0880800:CDS |
| CACCACTTGAAGAGACAGGA+TGG | 0.667219 | 6_1:-27649933 | None:intergenic |
| TCTGATCCAACAAGTTGACC+CGG | 0.667535 | 6_1:-27646062 | None:intergenic |
| AAGGATATCGAAATGAGCAG+AGG | 0.668623 | 6_1:+27649908 | Msa0880800:CDS |
| ACCTCTGCTGTGCCTAACGG+AGG | 0.674338 | 6_1:+27649482 | Msa0880800:CDS |
| CAGTCAAAAGCCATGAACTG+AGG | 0.675587 | 6_1:+27649402 | Msa0880800:CDS |
| ACAAATCCCGGAGAATGCGG+TGG | 0.677994 | 6_1:-27650752 | None:intergenic |
| ACCAAAACTGCATATGCTGG+GGG | 0.678637 | 6_1:+27648930 | Msa0880800:CDS |
| TGGGCTCCGGCTTAATACCG+AGG | 0.693204 | 6_1:+27655018 | Msa0880800:CDS |
| TGTGGAAGACACCCACGCAG+GGG | 0.697131 | 6_1:-27650169 | None:intergenic |
| TATGGAAGAGAAGAACAACT+GGG | 0.717360 | 6_1:+27650868 | Msa0880800:CDS |
| CCATAATGCTCGCAACATCG+AGG | 0.721796 | 6_1:-27646633 | None:intergenic |
| TCCAACTCACCAAAACCCTG+GGG | 0.739177 | 6_1:+27654255 | Msa0880800:CDS |
| CCTCGTATAAGCAAGATCAG+CGG | 0.742504 | 6_1:-27654287 | None:intergenic |
| CCAACTCACCAAAACCCTGG+GGG | 0.742962 | 6_1:+27654256 | Msa0880800:CDS |
| AAATTCCGAGAACCTTACCG+AGG | 0.753280 | 6_1:+27654426 | Msa0880800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTAATTTTTTTTA+GGG | + | chr6_1:27646385-27646404 | Msa0880800:intron | 0.0% |
| !!! | AAATTTTAATATATTATATA+TGG | - | chr6_1:27652695-27652714 | None:intergenic | 0.0% |
| !! | AGAAAATTAAATTAAAGTAT+TGG | + | chr6_1:27646428-27646447 | Msa0880800:intron | 10.0% |
| !! | TAAAATAAAAAATTCAAAAC+AGG | - | chr6_1:27646602-27646621 | None:intergenic | 10.0% |
| !! | ATTCAAAATTATAATAACTA+TGG | - | chr6_1:27649560-27649579 | None:intergenic | 10.0% |
| !! | AATAAAATTTAAATTCTTTC+CGG | + | chr6_1:27651470-27651489 | Msa0880800:intron | 10.0% |
| !! | TATATAATATAAAAACCATT+CGG | + | chr6_1:27651596-27651615 | Msa0880800:intron | 10.0% |
| !!! | GTTATTTTTTATAATAAAAG+TGG | - | chr6_1:27651946-27651965 | None:intergenic | 10.0% |
| !!! | CTGTTTTTTTTTTAAAAATA+AGG | - | chr6_1:27652190-27652209 | None:intergenic | 10.0% |
| !!! | TTTTAAATAAGTTGTTTTTT+TGG | + | chr6_1:27653414-27653433 | Msa0880800:intron | 10.0% |
| !!! | GAACTTTTTTTTTTTTTTTA+AGG | - | chr6_1:27653469-27653488 | None:intergenic | 10.0% |
| !!! | TTTTGATCCTTTTTTTTTTT+TGG | + | chr6_1:27645978-27645997 | Msa0880800:intron | 15.0% |
| !! | ATATACATTAAAATTGAAAC+TGG | - | chr6_1:27646152-27646171 | None:intergenic | 15.0% |
| !! | TTTCCATATGATTTAATTAT+TGG | - | chr6_1:27646353-27646372 | None:intergenic | 15.0% |
| !! | TAAATTTATAGTATTCAACA+TGG | + | chr6_1:27646473-27646492 | Msa0880800:intron | 15.0% |
| !!! | AAATCCATTGTTTTTAATAT+TGG | + | chr6_1:27646512-27646531 | Msa0880800:intron | 15.0% |
| !! | CAAAAATATAGTTAAGTTAA+CGG | - | chr6_1:27647467-27647486 | None:intergenic | 15.0% |
| !!! | TATAATTCTTTTATCTTTTC+AGG | + | chr6_1:27647547-27647566 | Msa0880800:intron | 15.0% |
| !!! | TTTTATGTTTATAGAGAAAA+CGG | - | chr6_1:27648615-27648634 | None:intergenic | 15.0% |
| !!! | ATAAACATAAAACATACTTT+TGG | + | chr6_1:27648623-27648642 | Msa0880800:intron | 15.0% |
| !!! | AAATATAAGAGTTTCTTTTT+TGG | + | chr6_1:27649206-27649225 | Msa0880800:intron | 15.0% |
| !!! | TTTTTTTTTTTTCCATTTTC+TGG | + | chr6_1:27649709-27649728 | Msa0880800:intron | 15.0% |
| !!! | TAAATTTTATTAGACAAACA+TGG | - | chr6_1:27651461-27651480 | None:intergenic | 15.0% |
| !!! | AAAAAATATTTGTTTTGGTT+CGG | - | chr6_1:27651908-27651927 | None:intergenic | 15.0% |
| !!! | TGGATAAAAAATATTTGTTT+TGG | - | chr6_1:27651913-27651932 | None:intergenic | 15.0% |
| !!! | ATAAGCTGTTTTTTAAAATA+AGG | - | chr6_1:27652141-27652160 | None:intergenic | 15.0% |
| !!! | AATAAGCTGTTTTTAAAATA+AGG | + | chr6_1:27653356-27653375 | Msa0880800:intron | 15.0% |
| !! | AAAAAAAAAAAAAGTTCAAG+TGG | + | chr6_1:27653472-27653491 | Msa0880800:intron | 15.0% |
| !! | AAGAACTGTTAATAAATTAA+CGG | + | chr6_1:27653548-27653567 | Msa0880800:intron | 15.0% |
| !!! | TTAATTTGATTATTATTCCT+AGG | + | chr6_1:27655233-27655252 | Msa0880800:intron | 15.0% |
| !!! | TTAAAAATGTTGTTATTGTT+AGG | + | chr6_1:27655391-27655410 | Msa0880800:three_prime_UTR | 15.0% |
| !! | AACATGATGAAATATGAAAA+GGG | - | chr6_1:27645948-27645967 | None:intergenic | 20.0% |
| !! | AAACATGATGAAATATGAAA+AGG | - | chr6_1:27645949-27645968 | None:intergenic | 20.0% |
| !! | TGATTTAATTATTGGATCAA+GGG | - | chr6_1:27646345-27646364 | None:intergenic | 20.0% |
| !! | ATGATTTAATTATTGGATCA+AGG | - | chr6_1:27646346-27646365 | None:intergenic | 20.0% |
| !! | GATCCAATAATTAAATCATA+TGG | + | chr6_1:27646347-27646366 | Msa0880800:intron | 20.0% |
| !!! | AATTAAAGTATTGGAATATG+AGG | + | chr6_1:27646437-27646456 | Msa0880800:intron | 20.0% |
| !! | GAATCCAATATTAAAAACAA+TGG | - | chr6_1:27646519-27646538 | None:intergenic | 20.0% |
| !!! | TACTTTTTTTGTGTATAAAC+AGG | + | chr6_1:27647105-27647124 | Msa0880800:intron | 20.0% |
| !!! | ATTTGTGTTATTGTTACTAT+TGG | + | chr6_1:27647273-27647292 | Msa0880800:intron | 20.0% |
| !! | ATACAATAATTTGAGAAGTA+CGG | - | chr6_1:27647512-27647531 | None:intergenic | 20.0% |
| !! | TCTCAAATTATTGTATCTAT+TGG | + | chr6_1:27647516-27647535 | Msa0880800:intron | 20.0% |
| !!! | AAAATTCAGGTTTTTGATAA+TGG | - | chr6_1:27648420-27648439 | None:intergenic | 20.0% |
| !! | TCTTGCTACAATATTAAAAA+AGG | + | chr6_1:27648488-27648507 | Msa0880800:intron | 20.0% |
| !! | TTTACATCTGATTATAACTA+TGG | - | chr6_1:27648718-27648737 | None:intergenic | 20.0% |
| !!! | CACTTTTTTTCATATAATCA+AGG | - | chr6_1:27649271-27649290 | None:intergenic | 20.0% |
| !!! | TGATTTTGTTGATCAAAATA+GGG | - | chr6_1:27649604-27649623 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTTGATCAAAAT+AGG | - | chr6_1:27649605-27649624 | None:intergenic | 20.0% |
| !!! | CAATTTTCTCAAATTATTAC+CGG | - | chr6_1:27650417-27650436 | None:intergenic | 20.0% |
| !! | AGTGATAATTGTAAAATAAC+AGG | - | chr6_1:27650576-27650595 | None:intergenic | 20.0% |
| !!! | CTTTCAGAAAAAATTGTTTT+AGG | + | chr6_1:27651136-27651155 | Msa0880800:CDS | 20.0% |
| !!! | AACATTTTATTAGAAGAAAG+AGG | - | chr6_1:27651496-27651515 | None:intergenic | 20.0% |
| !!! | AAATGTTAACTTTTAATCCA+AGG | + | chr6_1:27651509-27651528 | Msa0880800:intron | 20.0% |
| !!! | TTAGTCCTTTTAAGTTATTT+TGG | + | chr6_1:27651663-27651682 | Msa0880800:intron | 20.0% |
| !! | GTTATAAACCTCATATTTAA+AGG | - | chr6_1:27651701-27651720 | None:intergenic | 20.0% |
| !! | ATATGAGGTTTATAACAAAT+TGG | + | chr6_1:27651705-27651724 | Msa0880800:intron | 20.0% |
| !!! | ATAAAAGTGGTTTTATTCAT+TGG | - | chr6_1:27651933-27651952 | None:intergenic | 20.0% |
| !! | GAAATTCATGATGTTATAAA+AGG | - | chr6_1:27653018-27653037 | None:intergenic | 20.0% |
| !!! | ATGCAAAATAGCTTATTTTT+TGG | - | chr6_1:27653089-27653108 | None:intergenic | 20.0% |
| !!! | TAAATAAGCTGTTTTGAATA+AGG | + | chr6_1:27653188-27653207 | Msa0880800:intron | 20.0% |
| !! | TGACCAAAATAACTTAAATA+GGG | - | chr6_1:27653663-27653682 | None:intergenic | 20.0% |
| !!! | ATTGATCCTTTAAGTTATTT+TGG | - | chr6_1:27653865-27653884 | None:intergenic | 20.0% |
| !! | GTTACAAACATTAAACTTAA+AGG | + | chr6_1:27653887-27653906 | Msa0880800:intron | 20.0% |
| !! | AATGTTTACATTAGAACTAA+TGG | - | chr6_1:27654005-27654024 | None:intergenic | 20.0% |
| !!! | ATTAGTTCTAATGTAAACAT+TGG | + | chr6_1:27654004-27654023 | Msa0880800:intron | 20.0% |
| !! | AGCATGAATTTAAGTAAAAT+AGG | + | chr6_1:27654115-27654134 | Msa0880800:intron | 20.0% |
| !! | GCATGAATTTAAGTAAAATA+GGG | + | chr6_1:27654116-27654135 | Msa0880800:intron | 20.0% |
| !! | AACAATATCGTAAAATCATT+TGG | + | chr6_1:27654936-27654955 | Msa0880800:CDS | 20.0% |
| !!! | AACAACATTTTTAAGAAGTT+CGG | - | chr6_1:27655385-27655404 | None:intergenic | 20.0% |
| !! | AATGAAAGGATATTAAAGAA+GGG | - | chr6_1:27655483-27655502 | None:intergenic | 20.0% |
| !! | TATTCTGTTTATTGAACTTT+GGG | - | chr6_1:27655529-27655548 | None:intergenic | 20.0% |
| !!! | GTTAATTATTTAAGATATGC+TGG | - | chr6_1:27655693-27655712 | None:intergenic | 20.0% |
| !!! | TGTATAAAGACATTTTTACT+TGG | + | chr6_1:27655716-27655735 | Msa0880800:three_prime_UTR | 20.0% |
| ! | CATGATTAGATTATAGAGAA+GGG | - | chr6_1:27645885-27645904 | None:intergenic | 25.0% |
| ! | ACATGATTAGATTATAGAGA+AGG | - | chr6_1:27645886-27645905 | None:intergenic | 25.0% |
| ! | ATTTATAGTATTCAACATGG+TGG | + | chr6_1:27646476-27646495 | Msa0880800:intron | 25.0% |
| !!! | TTACTTTTAGGCAAATTCAT+TGG | - | chr6_1:27646742-27646761 | None:intergenic | 25.0% |
| !!! | AGCAACAGATAATTACTTTT+AGG | - | chr6_1:27646754-27646773 | None:intergenic | 25.0% |
| ! | TAATAAGATAGCATTGTCAT+TGG | - | chr6_1:27647078-27647097 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTGTATAAACAGG+TGG | + | chr6_1:27647108-27647127 | Msa0880800:intron | 25.0% |
| ! | AACATCTACGAACAAAATTT+GGG | - | chr6_1:27647415-27647434 | None:intergenic | 25.0% |
| ! | TAACATCTACGAACAAAATT+TGG | - | chr6_1:27647416-27647435 | None:intergenic | 25.0% |
| !! | ATTTTGTTCGTAGATGTTAT+TGG | + | chr6_1:27647417-27647436 | Msa0880800:CDS | 25.0% |
| ! | AATATAGTTAAGTTAACGGT+TGG | - | chr6_1:27647463-27647482 | None:intergenic | 25.0% |
| !! | AAATTATGATTTGTGTTGTG+AGG | - | chr6_1:27647671-27647690 | None:intergenic | 25.0% |
| !! | TACATATATGGTCCTTATTT+CGG | - | chr6_1:27647721-27647740 | None:intergenic | 25.0% |
| !! | TGGAATAACCATTCAATTTT+AGG | + | chr6_1:27648070-27648089 | Msa0880800:intron | 25.0% |
| ! | ACTTGAAACCTAAAATTGAA+TGG | - | chr6_1:27648081-27648100 | None:intergenic | 25.0% |
| ! | ATATGAATATGTCAAATGAG+AGG | + | chr6_1:27648183-27648202 | Msa0880800:intron | 25.0% |
| ! | TATGAATATGTCAAATGAGA+GGG | + | chr6_1:27648184-27648203 | Msa0880800:intron | 25.0% |
| !! | GTTTTATATATAATAGCCTG+TGG | - | chr6_1:27648250-27648269 | None:intergenic | 25.0% |
| ! | TTAGCACTTCAAAAAAATTC+AGG | - | chr6_1:27648433-27648452 | None:intergenic | 25.0% |
| ! | AACATAATGAAACAATGAGT+GGG | - | chr6_1:27648532-27648551 | None:intergenic | 25.0% |
| ! | ATATGAGAATGAACAAAACA+TGG | + | chr6_1:27648774-27648793 | Msa0880800:intron | 25.0% |
| !!! | TTATAACTTTCTTTGACTTG+TGG | + | chr6_1:27648799-27648818 | Msa0880800:intron | 25.0% |
| ! | TGTAGTAGAGTTTGAATTTA+CGG | - | chr6_1:27648859-27648878 | None:intergenic | 25.0% |
| ! | AGAAACTCTTATATTTCCTT+TGG | - | chr6_1:27649202-27649221 | None:intergenic | 25.0% |
| !!! | GCCTGACTTTTTTAAAAATA+TGG | + | chr6_1:27649297-27649316 | Msa0880800:intron | 25.0% |
| !!! | GCCATATTTTTAAAAAAGTC+AGG | - | chr6_1:27649301-27649320 | None:intergenic | 25.0% |
| ! | TAAAAATATGGCAACATAGT+TGG | + | chr6_1:27649309-27649328 | Msa0880800:intron | 25.0% |
| !! | TATTTTCATCCGTTATGTTT+TGG | + | chr6_1:27649351-27649370 | Msa0880800:intron | 25.0% |
| !! | ATTTTGAATTATCGTTTTGC+AGG | + | chr6_1:27649571-27649590 | Msa0880800:intron | 25.0% |
| ! | AAAAAGAAAAGAAGAAGCAA+AGG | - | chr6_1:27649694-27649713 | None:intergenic | 25.0% |
| !! | ACACTTTCTGAAAAATTGTA+TGG | - | chr6_1:27649865-27649884 | None:intergenic | 25.0% |
| ! | AGATGAATATGGTTCATTAA+CGG | - | chr6_1:27650088-27650107 | None:intergenic | 25.0% |
| !!! | ATTAAATACTTGTTCTGGAA+GGG | - | chr6_1:27650136-27650155 | None:intergenic | 25.0% |
| ! | GTAAGATTAAATACTTGTTC+TGG | - | chr6_1:27650141-27650160 | None:intergenic | 25.0% |
| ! | TTTACAACATTGGAATTCTA+TGG | - | chr6_1:27650311-27650330 | None:intergenic | 25.0% |
| ! | CAATTATCACTAAACTTTCT+AGG | + | chr6_1:27650585-27650604 | Msa0880800:intron | 25.0% |
| ! | GGAAATAAATGATGTCTTTA+AGG | - | chr6_1:27651008-27651027 | None:intergenic | 25.0% |
| ! | CATCATTTATTTCCAATACT+TGG | + | chr6_1:27651014-27651033 | Msa0880800:CDS | 25.0% |
| ! | TGCATTGAAAAACAGATTAA+AGG | + | chr6_1:27651108-27651127 | Msa0880800:CDS | 25.0% |
| ! | TGAAAAACAGATTAAAGGAA+TGG | + | chr6_1:27651113-27651132 | Msa0880800:CDS | 25.0% |
| !!! | TGCAATTTTGGAATATACAT+GGG | + | chr6_1:27651210-27651229 | Msa0880800:CDS | 25.0% |
| !!! | ATTACTTTATTTTCATGGTC+AGG | + | chr6_1:27651235-27651254 | Msa0880800:CDS | 25.0% |
| ! | TTACATAAACATACGCAATT+AGG | - | chr6_1:27651397-27651416 | None:intergenic | 25.0% |
| ! | GTTACAAACTACAAACTTAA+AGG | - | chr6_1:27651640-27651659 | None:intergenic | 25.0% |
| ! | TGTGACCAAAATAACTTAAA+AGG | - | chr6_1:27651671-27651690 | None:intergenic | 25.0% |
| ! | ACATAAGTCCTTTAAATATG+AGG | + | chr6_1:27651690-27651709 | Msa0880800:intron | 25.0% |
| !! | AAATTGGTCCTTTAAGTTTA+GGG | + | chr6_1:27651721-27651740 | Msa0880800:intron | 25.0% |
| !!! | ATAAGCTGTTTTGAATAAGT+TGG | - | chr6_1:27653224-27653243 | None:intergenic | 25.0% |
| !!! | TAGTATTGGATAGGATTTTA+AGG | - | chr6_1:27652467-27652486 | None:intergenic | 25.0% |
| !! | ATTCCAATCAACTTCATTTT+TGG | + | chr6_1:27652563-27652582 | Msa0880800:intron | 25.0% |
| ! | ACACCTTAACAGTTATTTAA+TGG | + | chr6_1:27652715-27652734 | Msa0880800:intron | 25.0% |
| ! | CACCTTAACAGTTATTTAAT+GGG | + | chr6_1:27652716-27652735 | Msa0880800:intron | 25.0% |
| ! | AACCCATTAAATAACTGTTA+AGG | - | chr6_1:27652721-27652740 | None:intergenic | 25.0% |
| ! | AAAAAAAAGTTCAAGTGGTT+TGG | + | chr6_1:27653477-27653496 | Msa0880800:intron | 25.0% |
| ! | CTGTTAATAAATTAACGGTT+CGG | + | chr6_1:27653553-27653572 | Msa0880800:intron | 25.0% |
| ! | AAAATAACTTAAATAGGGGT+GGG | - | chr6_1:27653658-27653677 | None:intergenic | 25.0% |
| ! | GACCAAAATAACTTAAATAG+GGG | - | chr6_1:27653662-27653681 | None:intergenic | 25.0% |
| ! | GTGACCAAAATAACTTAAAT+AGG | - | chr6_1:27653664-27653683 | None:intergenic | 25.0% |
| ! | GAAAACGTTTACAAACTTAA+AGG | - | chr6_1:27653695-27653714 | None:intergenic | 25.0% |
| !!! | CATAGTTTTGGTTAACAAAA+GGG | - | chr6_1:27653726-27653745 | None:intergenic | 25.0% |
| !!! | TCATAGTTTTGGTTAACAAA+AGG | - | chr6_1:27653727-27653746 | None:intergenic | 25.0% |
| !! | GACAACTTTTACAAACTTAA+AGG | + | chr6_1:27653767-27653786 | Msa0880800:intron | 25.0% |
| ! | GTTACAAAACTCAAACTTAA+AGG | + | chr6_1:27653827-27653846 | Msa0880800:intron | 25.0% |
| ! | CATGTAAGAAATGTATTCTT+AGG | - | chr6_1:27654030-27654049 | None:intergenic | 25.0% |
| ! | CTAAGAATACATTTCTTACA+TGG | + | chr6_1:27654028-27654047 | Msa0880800:intron | 25.0% |
| ! | CTAGTTATCTATAAACAGAA+AGG | - | chr6_1:27654070-27654089 | None:intergenic | 25.0% |
| ! | AATTCATGCTACATTCATAT+AGG | - | chr6_1:27654105-27654124 | None:intergenic | 25.0% |
| ! | ATTTAAGTAAAATAGGGTCA+TGG | + | chr6_1:27654122-27654141 | Msa0880800:intron | 25.0% |
| ! | ATTAAAACATTGTGTCTTCA+GGG | + | chr6_1:27654177-27654196 | Msa0880800:intron | 25.0% |
| ! | AAAAATATCGGTAATGATGA+AGG | - | chr6_1:27654767-27654786 | None:intergenic | 25.0% |
| ! | TGATTATTATTCCTAGGAAT+TGG | + | chr6_1:27655239-27655258 | Msa0880800:intron | 25.0% |
| ! | CAATGAAAGGATATTAAAGA+AGG | - | chr6_1:27655484-27655503 | None:intergenic | 25.0% |
| ! | CTTCTTTAATATCCTTTCAT+TGG | + | chr6_1:27655482-27655501 | Msa0880800:three_prime_UTR | 25.0% |
| ! | CTATTCTGTTTATTGAACTT+TGG | - | chr6_1:27655530-27655549 | None:intergenic | 25.0% |
| ! | CAAAGATAGTAGTAGTATAT+GGG | + | chr6_1:27655556-27655575 | Msa0880800:three_prime_UTR | 25.0% |
| ! | AAAGATAGTAGTAGTATATG+GGG | + | chr6_1:27655557-27655576 | Msa0880800:three_prime_UTR | 25.0% |
| !!! | ATCTCTAATGTTTGTTGTTA+TGG | + | chr6_1:27655754-27655773 | Msa0880800:three_prime_UTR | 25.0% |
| ATGATGAAATATGAAAAGGG+TGG | - | chr6_1:27645945-27645964 | None:intergenic | 30.0% | |
| CGCTGTACCAAAAAAAAAAA+AGG | - | chr6_1:27645988-27646007 | None:intergenic | 30.0% | |
| ! | ACCTCTGAAGATTATAATCA+GGG | - | chr6_1:27646014-27646033 | None:intergenic | 30.0% |
| ! | AACCTCTGAAGATTATAATC+AGG | - | chr6_1:27646015-27646034 | None:intergenic | 30.0% |
| ! | TTGTTGTTGACAAATCATTG+AGG | + | chr6_1:27646255-27646274 | Msa0880800:intron | 30.0% |
| TAGGGCATATGAATAGAAAA+CGG | + | chr6_1:27646403-27646422 | Msa0880800:intron | 30.0% | |
| AACAGGTAAATAAGTAGTAC+AGG | - | chr6_1:27646585-27646604 | None:intergenic | 30.0% | |
| ATACTTGTGATTACAAAGCA+TGG | - | chr6_1:27646701-27646720 | None:intergenic | 30.0% | |
| !! | TGTTTGTTGTGAAGAAGAAA+TGG | + | chr6_1:27646790-27646809 | Msa0880800:intron | 30.0% |
| ACAATCTACGAGAAAATGAA+TGG | - | chr6_1:27646836-27646855 | None:intergenic | 30.0% | |
| GCTCTGATTCATAATTATCA+TGG | - | chr6_1:27646948-27646967 | None:intergenic | 30.0% | |
| ! | TTCGGAACTTTAGAAAAGAT+GGG | + | chr6_1:27647160-27647179 | Msa0880800:CDS | 30.0% |
| AACTGGAAAAAGAAAAAGGA+TGG | + | chr6_1:27647186-27647205 | Msa0880800:CDS | 30.0% | |
| !! | AGTGAGGATTTTCATTTTTG+TGG | + | chr6_1:27647242-27647261 | Msa0880800:intron | 30.0% |
| !! | GTTATTGTTACTATTGGTTC+TGG | + | chr6_1:27647279-27647298 | Msa0880800:intron | 30.0% |
| ! | CTTTCTTTTCTCTATCAATC+AGG | + | chr6_1:27647340-27647359 | Msa0880800:intron | 30.0% |
| ATCCATGTATATTATGCACA+TGG | + | chr6_1:27647380-27647399 | Msa0880800:CDS | 30.0% | |
| ! | GCGAAATTAAGCTTTTTGTA+AGG | - | chr6_1:27647649-27647668 | None:intergenic | 30.0% |
| !!! | GTATTGTTTTAGCCGAAATA+AGG | + | chr6_1:27647706-27647725 | Msa0880800:intron | 30.0% |
| ! | TTTGAAATTCACTGATCCTT+GGG | + | chr6_1:27647757-27647776 | Msa0880800:intron | 30.0% |
| AAACCTACATTATATACCCA+AGG | - | chr6_1:27647776-27647795 | None:intergenic | 30.0% | |
| !!! | ATTTTTTATGGAGTTGATCG+TGG | - | chr6_1:27647825-27647844 | None:intergenic | 30.0% |
| !!! | TGCTGCAAGGAAATTTTTTA+TGG | - | chr6_1:27647837-27647856 | None:intergenic | 30.0% |
| ! | AGCAAAAATGTCTTTTCGAT+TGG | + | chr6_1:27647853-27647872 | Msa0880800:intron | 30.0% |
| TAAGCATCTCAATTTCTCAA+AGG | - | chr6_1:27648210-27648229 | None:intergenic | 30.0% | |
| TTGTTCCTATAAGTTCTTCT+AGG | + | chr6_1:27648293-27648312 | Msa0880800:intron | 30.0% | |
| TGTTCCTATAAGTTCTTCTA+GGG | + | chr6_1:27648294-27648313 | Msa0880800:intron | 30.0% | |
| AATTCCCTAGAAGAACTTAT+AGG | - | chr6_1:27648301-27648320 | None:intergenic | 30.0% | |
| TAATAACCGCAATGAACTAA+TGG | - | chr6_1:27648358-27648377 | None:intergenic | 30.0% | |
| !! | TAGCTCTTTTAAAGAAGTGA+AGG | + | chr6_1:27648460-27648479 | Msa0880800:intron | 30.0% |
| CAACATAATGAAACAATGAG+TGG | - | chr6_1:27648533-27648552 | None:intergenic | 30.0% | |
| GTAGTAGAGTTTGAATTTAC+GGG | - | chr6_1:27648858-27648877 | None:intergenic | 30.0% | |
| TGTCAGAAGAAATAGATTCA+GGG | + | chr6_1:27648907-27648926 | Msa0880800:CDS | 30.0% | |
| TGTGCAATTATCTTACATAG+AGG | - | chr6_1:27649142-27649161 | None:intergenic | 30.0% | |
| TGTCCATTTCCAAAACATAA+CGG | - | chr6_1:27649363-27649382 | None:intergenic | 30.0% | |
| AATCAAGTATCTCCAGAAAA+TGG | - | chr6_1:27649724-27649743 | None:intergenic | 30.0% | |
| !! | TGTTGATTCCTTAAACACTT+TGG | + | chr6_1:27649954-27649973 | Msa0880800:CDS | 30.0% |
| TAATGAACCATATTCATCTC+TGG | + | chr6_1:27650089-27650108 | Msa0880800:CDS | 30.0% | |
| ! | GATTAAATACTTGTTCTGGA+AGG | - | chr6_1:27650137-27650156 | None:intergenic | 30.0% |
| ACAAACAAAGGAAAAGGAAA+AGG | - | chr6_1:27650211-27650230 | None:intergenic | 30.0% | |
| AGATACACAAACAAAGGAAA+AGG | - | chr6_1:27650217-27650236 | None:intergenic | 30.0% | |
| CTAAGTAGATACACAAACAA+AGG | - | chr6_1:27650223-27650242 | None:intergenic | 30.0% | |
| ! | GTTATGACTAGTTGATTTCT+TGG | + | chr6_1:27650266-27650285 | Msa0880800:intron | 30.0% |
| AATTCCAATGTTGTAAACTG+TGG | + | chr6_1:27650314-27650333 | Msa0880800:intron | 30.0% | |
| TATTCCACAGTTTACAACAT+TGG | - | chr6_1:27650321-27650340 | None:intergenic | 30.0% | |
| TAAGATGTGCATATTCTTCA+CGG | - | chr6_1:27650350-27650369 | None:intergenic | 30.0% | |
| ACAGGTAGTAAGTAAATTGA+AGG | - | chr6_1:27650558-27650577 | None:intergenic | 30.0% | |
| GATACTCAAAAGTAACAACT+TGG | - | chr6_1:27650817-27650836 | None:intergenic | 30.0% | |
| ! | CATTAAGTATTGCCAAGTAT+TGG | - | chr6_1:27651029-27651048 | None:intergenic | 30.0% |
| TTTCAATGCAATTCCAAACA+GGG | - | chr6_1:27651098-27651117 | None:intergenic | 30.0% | |
| ! | TTTTCAATGCAATTCCAAAC+AGG | - | chr6_1:27651099-27651118 | None:intergenic | 30.0% |
| ATTCCAAAATTGCACACAAA+TGG | - | chr6_1:27651204-27651223 | None:intergenic | 30.0% | |
| !!! | GTGCAATTTTGGAATATACA+TGG | + | chr6_1:27651209-27651228 | Msa0880800:CDS | 30.0% |
| !!! | GGGCAATTACTTTATTTTCA+TGG | + | chr6_1:27651230-27651249 | Msa0880800:CDS | 30.0% |
| AACTAACATGTTTGAACAAG+CGG | - | chr6_1:27651345-27651364 | None:intergenic | 30.0% | |
| GCGTATGTTTATGTAATAGT+AGG | + | chr6_1:27651401-27651420 | Msa0880800:intron | 30.0% | |
| ! | TTTTATTAGAAGAAAGAGGC+CGG | - | chr6_1:27651492-27651511 | None:intergenic | 30.0% |
| ! | CAAATTGGTCCTTTAAGTTT+AGG | + | chr6_1:27651720-27651739 | Msa0880800:intron | 30.0% |
| ! | AATTGGTCCTTTAAGTTTAG+GGG | + | chr6_1:27651722-27651741 | Msa0880800:intron | 30.0% |
| ACCATTTCAAAATTTCGGTT+CGG | - | chr6_1:27651785-27651804 | None:intergenic | 30.0% | |
| !!! | ACCGAAATTTTGAAATGGTT+CGG | + | chr6_1:27651786-27651805 | Msa0880800:intron | 30.0% |
| ATGGTTAATAGGTAAGCAAA+TGG | - | chr6_1:27651879-27651898 | None:intergenic | 30.0% | |
| !!! | ATATTTGTTTTGGTTCGGTT+CGG | - | chr6_1:27651903-27651922 | None:intergenic | 30.0% |
| ! | GGTGTTTTGCATAAAATAAG+CGG | - | chr6_1:27653209-27653228 | None:intergenic | 30.0% |
| TAAATAACAGAGGGTAGTAT+TGG | - | chr6_1:27652481-27652500 | None:intergenic | 30.0% | |
| CATCAGTGATAAATAACAGA+GGG | - | chr6_1:27652490-27652509 | None:intergenic | 30.0% | |
| ACATCAGTGATAAATAACAG+AGG | - | chr6_1:27652491-27652510 | None:intergenic | 30.0% | |
| ATTTATCACTGATGTGTACT+AGG | + | chr6_1:27652496-27652515 | Msa0880800:intron | 30.0% | |
| ! | GATCCAAAAATGAAGTTGAT+TGG | - | chr6_1:27652569-27652588 | None:intergenic | 30.0% |
| !! | ACAGTTATTTAATGGGTTTC+TGG | + | chr6_1:27652723-27652742 | Msa0880800:intron | 30.0% |
| TATCTGTGTGAAAAGAAATG+TGG | + | chr6_1:27652756-27652775 | Msa0880800:intron | 30.0% | |
| TTAAGCTTCGTATGTACAAT+TGG | + | chr6_1:27652784-27652803 | Msa0880800:intron | 30.0% | |
| !!! | TTTTAGCTCTACGATTATTC+AGG | + | chr6_1:27652841-27652860 | Msa0880800:intron | 30.0% |
| GGAATAGTTAGTGAAATTAC+AGG | - | chr6_1:27652997-27653016 | None:intergenic | 30.0% | |
| AAAATAACCGACCATTACAA+TGG | - | chr6_1:27653587-27653606 | None:intergenic | 30.0% | |
| !! | TTGTAATGGTCGGTTATTTT+TGG | + | chr6_1:27653587-27653606 | Msa0880800:intron | 30.0% |
| CAAAATAACTTAAATAGGGG+TGG | - | chr6_1:27653659-27653678 | None:intergenic | 30.0% | |
| !! | CACCCCTATTTAAGTTATTT+TGG | + | chr6_1:27653657-27653676 | Msa0880800:intron | 30.0% |
| ! | CTTATGACACATCATAGTTT+TGG | - | chr6_1:27653738-27653757 | None:intergenic | 30.0% |
| CAAAACTATGATGTGTCATA+AGG | + | chr6_1:27653736-27653755 | Msa0880800:intron | 30.0% | |
| !! | ATTGGTCCTTTGAGTTATTT+TGG | - | chr6_1:27653805-27653824 | None:intergenic | 30.0% |
| !! | GTTTGAGTTTTGTAACAGAT+TGG | - | chr6_1:27653823-27653842 | None:intergenic | 30.0% |
| GTGCAACCAAAATAACTTAA+AGG | + | chr6_1:27653856-27653875 | Msa0880800:intron | 30.0% | |
| GTTTGGTTAAATTAGATCAG+AGG | - | chr6_1:27653914-27653933 | None:intergenic | 30.0% | |
| TCTATAAACAGAAAGGAACT+TGG | - | chr6_1:27654063-27654082 | None:intergenic | 30.0% | |
| GATTAAAACATTGTGTCTTC+AGG | + | chr6_1:27654176-27654195 | Msa0880800:intron | 30.0% | |
| TTCCTTAAAGTTACAAACAG+AGG | + | chr6_1:27654534-27654553 | Msa0880800:CDS | 30.0% | |
| CTTTCTTTGTCTCAAAATTG+CGG | - | chr6_1:27654630-27654649 | None:intergenic | 30.0% | |
| !!! | TTTTGAGACAAAGAAAGTGA+TGG | + | chr6_1:27654633-27654652 | Msa0880800:CDS | 30.0% |
| AACGTCTCGCTAAAAAATAT+CGG | - | chr6_1:27654779-27654798 | None:intergenic | 30.0% | |
| CAAATCAATTGATACAATGC+AGG | + | chr6_1:27654886-27654905 | Msa0880800:intron | 30.0% | |
| TACTACCTTTGCTTGATTAA+GGG | - | chr6_1:27655203-27655222 | None:intergenic | 30.0% | |
| TTACTACCTTTGCTTGATTA+AGG | - | chr6_1:27655204-27655223 | None:intergenic | 30.0% | |
| TCTACAAGTAAGAACACATA+GGG | - | chr6_1:27655281-27655300 | None:intergenic | 30.0% | |
| TTCTACAAGTAAGAACACAT+AGG | - | chr6_1:27655282-27655301 | None:intergenic | 30.0% | |
| AAGTTGACATGAAAATGAAG+AGG | + | chr6_1:27655351-27655370 | Msa0880800:CDS | 30.0% | |
| CCATATACTACTACTATCTT+TGG | - | chr6_1:27655558-27655577 | None:intergenic | 30.0% | |
| CCAAAGATAGTAGTAGTATA+TGG | + | chr6_1:27655555-27655574 | Msa0880800:three_prime_UTR | 30.0% | |
| !! | TTTGATAATTTTCTCAGCCA+GGG | - | chr6_1:27655644-27655663 | None:intergenic | 30.0% |
| !! | ATTTGATAATTTTCTCAGCC+AGG | - | chr6_1:27655645-27655664 | None:intergenic | 30.0% |
| !! | GTTTGTTGTTATGGTACATT+TGG | + | chr6_1:27655763-27655782 | Msa0880800:three_prime_UTR | 30.0% |
| TTTGGAAAAAAGCTAAAAGC+AGG | + | chr6_1:27655781-27655800 | Msa0880800:three_prime_UTR | 30.0% | |
| AAAAGCTAAAAGCAGGAAAA+TGG | + | chr6_1:27655788-27655807 | Msa0880800:three_prime_UTR | 30.0% | |
| AAAGCTAAAAGCAGGAAAAT+GGG | + | chr6_1:27655789-27655808 | Msa0880800:three_prime_UTR | 30.0% | |
| AAGACAATAGAAGGACAGAA+AGG | + | chr6_1:27645769-27645788 | Msa0880800:five_prime_UTR | 35.0% | |
| ACCCTGATTATAATCTTCAG+AGG | + | chr6_1:27646010-27646029 | Msa0880800:five_prime_UTR | 35.0% | |
| ! | GATGATGGCAAATAACTTAC+CGG | + | chr6_1:27646043-27646062 | Msa0880800:CDS | 35.0% |
| ATGATGGCAAATAACTTACC+GGG | + | chr6_1:27646044-27646063 | Msa0880800:CDS | 35.0% | |
| ACAATGTCCCAACATTTAGT+GGG | + | chr6_1:27646314-27646333 | Msa0880800:intron | 35.0% | |
| AGGGCATATGAATAGAAAAC+GGG | + | chr6_1:27646404-27646423 | Msa0880800:intron | 35.0% | |
| ! | AGTATTGGAATATGAGGAAG+TGG | + | chr6_1:27646443-27646462 | Msa0880800:intron | 35.0% |
| TATTCAACATGGTGGTAGAA+TGG | + | chr6_1:27646484-27646503 | Msa0880800:intron | 35.0% | |
| TGGATTCGAAGTATGTTGTT+CGG | + | chr6_1:27646532-27646551 | Msa0880800:intron | 35.0% | |
| !! | ATTCATTGGCTTGACATTGA+TGG | - | chr6_1:27646728-27646747 | None:intergenic | 35.0% |
| CTACGAGAAAATGAATGGTA+GGG | - | chr6_1:27646831-27646850 | None:intergenic | 35.0% | |
| TCTACGAGAAAATGAATGGT+AGG | - | chr6_1:27646832-27646851 | None:intergenic | 35.0% | |
| TCTGCAGATAAGATGCATTA+TGG | - | chr6_1:27646911-27646930 | None:intergenic | 35.0% | |
| !!! | TTCTGATTCGTAGCTTGTTT+TGG | + | chr6_1:27646971-27646990 | Msa0880800:intron | 35.0% |
| ! | CTTCGGAACTTTAGAAAAGA+TGG | + | chr6_1:27647159-27647178 | Msa0880800:CDS | 35.0% |
| GCACAACTGGAAAAAGAAAA+AGG | + | chr6_1:27647182-27647201 | Msa0880800:CDS | 35.0% | |
| ! | CTTTTCTCTATCAATCAGGT+TGG | + | chr6_1:27647344-27647363 | Msa0880800:intron | 35.0% |
| !! | ATCAGGTTGGTAATGAAGAA+AGG | + | chr6_1:27647357-27647376 | Msa0880800:intron | 35.0% |
| GACCATGTGCATAATATACA+TGG | - | chr6_1:27647385-27647404 | None:intergenic | 35.0% | |
| GTGAATTTCAAACTGACCAA+TGG | - | chr6_1:27647749-27647768 | None:intergenic | 35.0% | |
| ! | GTTTGAAATTCACTGATCCT+TGG | + | chr6_1:27647756-27647775 | Msa0880800:intron | 35.0% |
| GATCCTTGGGTATATAATGT+AGG | + | chr6_1:27647770-27647789 | Msa0880800:intron | 35.0% | |
| ! | GAAAAGACATTTTTGCTGCA+AGG | - | chr6_1:27647850-27647869 | None:intergenic | 35.0% |
| !! | AAATGTCTTTTCGATTGGTC+TGG | + | chr6_1:27647858-27647877 | Msa0880800:intron | 35.0% |
| !!! | TGTGCAGTCTCTTTTGTTTT+TGG | + | chr6_1:27647911-27647930 | Msa0880800:intron | 35.0% |
| !!! | GTGCAGTCTCTTTTGTTTTT+GGG | + | chr6_1:27647912-27647931 | Msa0880800:intron | 35.0% |
| CACATGCAAGTAATGGTAAA+TGG | - | chr6_1:27647962-27647981 | None:intergenic | 35.0% | |
| TTACCATTACTTGCATGTGA+AGG | + | chr6_1:27647963-27647982 | Msa0880800:intron | 35.0% | |
| TACAGATTCATTGTTGGACT+TGG | - | chr6_1:27647995-27648014 | None:intergenic | 35.0% | |
| AAGTCCAACAATGAATCTGT+AGG | + | chr6_1:27647994-27648013 | Msa0880800:intron | 35.0% | |
| TAAGCCTACAGATTCATTGT+TGG | - | chr6_1:27648001-27648020 | None:intergenic | 35.0% | |
| CAGTTGAATAGTACTACAAG+TGG | + | chr6_1:27648050-27648069 | Msa0880800:intron | 35.0% | |
| !! | GCTAATTTTACTTTTGCCAC+AGG | + | chr6_1:27648231-27648250 | Msa0880800:intron | 35.0% |
| TCAAAGTTCCAAAAGAAGAC+TGG | - | chr6_1:27648578-27648597 | None:intergenic | 35.0% | |
| AGATGTAAATCCATGCTTGA+AGG | + | chr6_1:27648729-27648748 | Msa0880800:intron | 35.0% | |
| GATGTAAATCCATGCTTGAA+GGG | + | chr6_1:27648730-27648749 | Msa0880800:intron | 35.0% | |
| TTTGAATTTACGGGAGTGAT+TGG | - | chr6_1:27648849-27648868 | None:intergenic | 35.0% | |
| ATTTCTTCTGACAGAATCCA+TGG | - | chr6_1:27648900-27648919 | None:intergenic | 35.0% | |
| CTGTCAGAAGAAATAGATTC+AGG | + | chr6_1:27648906-27648925 | Msa0880800:CDS | 35.0% | |
| ! | ATCTTACATAGAGGCACATA+TGG | - | chr6_1:27649133-27649152 | None:intergenic | 35.0% |
| ATGAGCAGAACAAAATGAGT+TGG | - | chr6_1:27649175-27649194 | None:intergenic | 35.0% | |
| TGTTCTGCTCATATTTCCAA+AGG | + | chr6_1:27649183-27649202 | Msa0880800:intron | 35.0% | |
| !!! | CATCCGTTATGTTTTGGAAA+TGG | + | chr6_1:27649357-27649376 | Msa0880800:intron | 35.0% |
| ACGAGCTTAATACACTTGAA+TGG | + | chr6_1:27649429-27649448 | Msa0880800:CDS | 35.0% | |
| CGAGCTTAATACACTTGAAT+GGG | + | chr6_1:27649430-27649449 | Msa0880800:CDS | 35.0% | |
| CTACATATGATTATCTCACC+AGG | + | chr6_1:27649765-27649784 | Msa0880800:intron | 35.0% | |
| AATTTCTGCAGATGCATTGT+TGG | - | chr6_1:27649794-27649813 | None:intergenic | 35.0% | |
| ATACTATTGCTCACTGCAAT+TGG | - | chr6_1:27649841-27649860 | None:intergenic | 35.0% | |
| CTTCAGACAATTAGCAATCA+AGG | + | chr6_1:27649889-27649908 | Msa0880800:CDS | 35.0% | |
| ! | GTCATTGACCAAAGTGTTTA+AGG | - | chr6_1:27649965-27649984 | None:intergenic | 35.0% |
| AGAATCATCAACTGAACAAG+GGG | - | chr6_1:27650043-27650062 | None:intergenic | 35.0% | |
| CAGAATCATCAACTGAACAA+GGG | - | chr6_1:27650044-27650063 | None:intergenic | 35.0% | |
| ! | TTCATTAACGGATGAAACTG+AGG | - | chr6_1:27650076-27650095 | None:intergenic | 35.0% |
| !! | ATAACTTTGAAGCACTGACA+CGG | + | chr6_1:27650376-27650395 | Msa0880800:intron | 35.0% |
| ! | CTTCAAATTGAAGGCATATC+CGG | - | chr6_1:27650488-27650507 | None:intergenic | 35.0% |
| TTTATACACCTATCCAGCAT+TGG | - | chr6_1:27650513-27650532 | None:intergenic | 35.0% | |
| CACACATTAGATTGGACTTT+GGG | - | chr6_1:27650670-27650689 | None:intergenic | 35.0% | |
| ACACACATTAGATTGGACTT+TGG | - | chr6_1:27650671-27650690 | None:intergenic | 35.0% | |
| TCCAATCTAATGTGTGTATG+TGG | + | chr6_1:27650674-27650693 | Msa0880800:CDS | 35.0% | |
| ACCACATACACACATTAGAT+TGG | - | chr6_1:27650678-27650697 | None:intergenic | 35.0% | |
| AAGTAGAGATTCACAAATCC+CGG | - | chr6_1:27650767-27650786 | None:intergenic | 35.0% | |
| ! | AATCTCTACTTGAGCTTTGA+TGG | + | chr6_1:27650776-27650795 | Msa0880800:CDS | 35.0% |
| AAGTAACAACTTGGCTGATA+GGG | - | chr6_1:27650808-27650827 | None:intergenic | 35.0% | |
| AAAGTAACAACTTGGCTGAT+AGG | - | chr6_1:27650809-27650828 | None:intergenic | 35.0% | |
| TATGGAAGAGAAGAACAACT+GGG | + | chr6_1:27650868-27650887 | Msa0880800:CDS | 35.0% | |
| ACGAGTTTCAACTTCAAATG+AGG | + | chr6_1:27650891-27650910 | Msa0880800:CDS | 35.0% | |
| AGTATCACTTAGCAGACTAA+AGG | + | chr6_1:27650967-27650986 | Msa0880800:CDS | 35.0% | |
| ! | CATCCATTTGTGTGCAATTT+TGG | + | chr6_1:27651198-27651217 | Msa0880800:CDS | 35.0% |
| CTAGATTTCCGGGATAAATT+TGG | + | chr6_1:27651265-27651284 | Msa0880800:CDS | 35.0% | |
| ATTTCCGGGATAAATTTGGA+TGG | + | chr6_1:27651269-27651288 | Msa0880800:CDS | 35.0% | |
| ACTAACATGTTTGAACAAGC+GGG | - | chr6_1:27651344-27651363 | None:intergenic | 35.0% | |
| AAACATACGCAATTAGGCAA+AGG | - | chr6_1:27651391-27651410 | None:intergenic | 35.0% | |
| ATTCATTTGGACTTGAAGCA+TGG | - | chr6_1:27651555-27651574 | None:intergenic | 35.0% | |
| TCCAAATGAATCATGTGCAA+GGG | + | chr6_1:27651564-27651583 | Msa0880800:intron | 35.0% | |
| ATTCGGCTAAACTATACCAT+GGG | + | chr6_1:27651613-27651632 | Msa0880800:intron | 35.0% | |
| !! | TTCAAAATTTCGGTTCGGTT+CGG | - | chr6_1:27651780-27651799 | None:intergenic | 35.0% |
| !! | ACCGAACCGAAATTTTGAAA+TGG | + | chr6_1:27651781-27651800 | Msa0880800:intron | 35.0% |
| CCCGAACCATTTCAAAATTT+CGG | - | chr6_1:27651790-27651809 | None:intergenic | 35.0% | |
| !!! | CCGAAATTTTGAAATGGTTC+GGG | + | chr6_1:27651787-27651806 | Msa0880800:intron | 35.0% |
| ! | ACCATAACTTTGGTTCAGTT+CGG | - | chr6_1:27651848-27651867 | None:intergenic | 35.0% |
| ACTGAACCAAAGTTATGGTT+TGG | + | chr6_1:27651849-27651868 | Msa0880800:intron | 35.0% | |
| GGTTAACCAAACCATAACTT+TGG | - | chr6_1:27651858-27651877 | None:intergenic | 35.0% | |
| !!! | AGGATTTTAAGGCTGTTCAA+AGG | - | chr6_1:27652456-27652475 | None:intergenic | 35.0% |
| GGATTTATCCACTATAAGCT+CGG | + | chr6_1:27652805-27652824 | Msa0880800:intron | 35.0% | |
| AAACCACTTGAACTCTTTGT+TGG | - | chr6_1:27653446-27653465 | None:intergenic | 35.0% | |
| !! | AAAGTTCAAGTGGTTTGGTT+CGG | + | chr6_1:27653482-27653501 | Msa0880800:intron | 35.0% |
| !!! | CGGTTATTTTTGGTTCAGTT+CGG | + | chr6_1:27653597-27653616 | Msa0880800:intron | 35.0% |
| GTGTGACCAAAATAACTCAA+AGG | + | chr6_1:27653796-27653815 | Msa0880800:intron | 35.0% | |
| !! | TTTTAAGCCTTTCGAGTAGT+TGG | + | chr6_1:27653958-27653977 | Msa0880800:intron | 35.0% |
| TACAACATAGATTCCGTACA+TGG | + | chr6_1:27654671-27654690 | Msa0880800:CDS | 35.0% | |
| ! | CTTGAATCTTGATAGCTTGA+TGG | - | chr6_1:27654726-27654745 | None:intergenic | 35.0% |
| !! | CTTTCAGGTGTTTTCAACAA+CGG | + | chr6_1:27654912-27654931 | Msa0880800:CDS | 35.0% |
| CGTAAAATCATTTGGTCAGT+TGG | + | chr6_1:27654944-27654963 | Msa0880800:CDS | 35.0% | |
| ! | AGAAAGCGCAAGAAGATTAT+AGG | + | chr6_1:27655164-27655183 | Msa0880800:CDS | 35.0% |
| AGATTATAGGAGGATGAAGT+TGG | + | chr6_1:27655177-27655196 | Msa0880800:CDS | 35.0% | |
| AAGCAAATTCTCCAATTCCT+AGG | - | chr6_1:27655253-27655272 | None:intergenic | 35.0% | |
| AATATCCTTTCATTGGCGAT+TGG | + | chr6_1:27655489-27655508 | Msa0880800:three_prime_UTR | 35.0% | |
| ! | CTGTTTATTGAACTTTGGGA+CGG | - | chr6_1:27655525-27655544 | None:intergenic | 35.0% |
| ATAGTAGTAGTATATGGGGA+TGG | + | chr6_1:27655561-27655580 | Msa0880800:three_prime_UTR | 35.0% | |
| AATATGAAAAGGGTGGTGAC+TGG | - | chr6_1:27645938-27645957 | None:intergenic | 40.0% | |
| AGAGGTTTATGCGATGATGA+TGG | + | chr6_1:27646028-27646047 | Msa0880800:exon | 40.0% | |
| CTTGTTGGATCAGAGATACA+TGG | + | chr6_1:27646071-27646090 | Msa0880800:CDS | 40.0% | |
| ATATGAAGCTGGAGTGAAGT+AGG | - | chr6_1:27646122-27646141 | None:intergenic | 40.0% | |
| CTGGAAAAGACATATGAAGC+TGG | - | chr6_1:27646133-27646152 | None:intergenic | 40.0% | |
| CACAATGTCCCAACATTTAG+TGG | + | chr6_1:27646313-27646332 | Msa0880800:intron | 40.0% | |
| AGCATGGCATGAATCTCATT+GGG | - | chr6_1:27646685-27646704 | None:intergenic | 40.0% | |
| AAGCATGGCATGAATCTCAT+TGG | - | chr6_1:27646686-27646705 | None:intergenic | 40.0% | |
| ! | TAAAGTTCCGAAGCATCTTG+CGG | - | chr6_1:27647152-27647171 | None:intergenic | 40.0% |
| TTAGAAAAGATGGGCACAAC+TGG | + | chr6_1:27647169-27647188 | Msa0880800:CDS | 40.0% | |
| CTCATGAGCACTTAAAAGTG+AGG | + | chr6_1:27647226-27647245 | Msa0880800:intron | 40.0% | |
| !! | CTTTTATCTTTTCAGGAGCC+TGG | + | chr6_1:27647554-27647573 | Msa0880800:intron | 40.0% |
| GTGTTTCACGGTAATGAACA+AGG | - | chr6_1:27647590-27647609 | None:intergenic | 40.0% | |
| TCATTACCGTGAAACACAAG+AGG | + | chr6_1:27647593-27647612 | Msa0880800:CDS | 40.0% | |
| CGGCTAAAACAATACACATG+TGG | - | chr6_1:27647701-27647720 | None:intergenic | 40.0% | |
| CCAATGGCAGCATACATATA+TGG | - | chr6_1:27647733-27647752 | None:intergenic | 40.0% | |
| CCATATATGTATGCTGCCAT+TGG | + | chr6_1:27647730-27647749 | Msa0880800:intron | 40.0% | |
| GTAGTCGAGACATGTTCAAA+CGG | - | chr6_1:27647801-27647820 | None:intergenic | 40.0% | |
| CTACCTTCACATGCAAGTAA+TGG | - | chr6_1:27647969-27647988 | None:intergenic | 40.0% | |
| CAACCACCATTAGTTCATTG+CGG | + | chr6_1:27648349-27648368 | Msa0880800:intron | 40.0% | |
| TAACCGCAATGAACTAATGG+TGG | - | chr6_1:27648355-27648374 | None:intergenic | 40.0% | |
| AGAAGACTGGATGGTGAAAT+TGG | - | chr6_1:27648565-27648584 | None:intergenic | 40.0% | |
| ! | TTCACCATCCAGTCTTCTTT+TGG | + | chr6_1:27648567-27648586 | Msa0880800:intron | 40.0% |
| AGTTCCAAAAGAAGACTGGA+TGG | - | chr6_1:27648574-27648593 | None:intergenic | 40.0% | |
| CATAAATAGCCCTTCAAGCA+TGG | - | chr6_1:27648742-27648761 | None:intergenic | 40.0% | |
| TGGCTCATGATACAGTTTCA+GGG | + | chr6_1:27648819-27648838 | Msa0880800:intron | 40.0% | |
| CATACTACTCGAAGTAGAGA+TGG | + | chr6_1:27648997-27649016 | Msa0880800:intron | 40.0% | |
| ! | GCAGAACAAAATGAGTTGGA+AGG | - | chr6_1:27649171-27649190 | None:intergenic | 40.0% |
| !!! | AGTTTCTTTTTTGGCTCACG+TGG | + | chr6_1:27649215-27649234 | Msa0880800:intron | 40.0% |
| CACGTGGTGATATGCATATA+TGG | + | chr6_1:27649231-27649250 | Msa0880800:intron | 40.0% | |
| GGCAACATAGTTGGATTTAC+TGG | + | chr6_1:27649318-27649337 | Msa0880800:intron | 40.0% | |
| ! | TAAGATCGTTTGCTACGACT+AGG | - | chr6_1:27649460-27649479 | None:intergenic | 40.0% |
| AATCACCATTTACCTCCGTT+AGG | - | chr6_1:27649497-27649516 | None:intergenic | 40.0% | |
| AACACTACCAGTTACATGTC+TGG | + | chr6_1:27649528-27649547 | Msa0880800:intron | 40.0% | |
| AAGGATATCGAAATGAGCAG+AGG | + | chr6_1:27649908-27649927 | Msa0880800:CDS | 40.0% | |
| CAATGACAGATTGCAAAGTC+AGG | + | chr6_1:27649978-27649997 | Msa0880800:CDS | 40.0% | |
| AAGGGGAATCAGACATGATT+TGG | - | chr6_1:27650026-27650045 | None:intergenic | 40.0% | |
| GCAGAATCATCAACTGAACA+AGG | - | chr6_1:27650045-27650064 | None:intergenic | 40.0% | |
| !! | TCAGTTGATGATTCTGCTCT+TGG | + | chr6_1:27650048-27650067 | Msa0880800:CDS | 40.0% |
| ACCATATTCATCTCTGGTAG+TGG | + | chr6_1:27650095-27650114 | Msa0880800:CDS | 40.0% | |
| TCCACTACCAGAGATGAATA+TGG | - | chr6_1:27650099-27650118 | None:intergenic | 40.0% | |
| GTCTTCCACAGAGAAATCAA+AGG | + | chr6_1:27650182-27650201 | Msa0880800:CDS | 40.0% | |
| ! | GGAAACCTTTGATTTCTCTG+TGG | - | chr6_1:27650190-27650209 | None:intergenic | 40.0% |
| ! | ATTATTACCGGTGCTGAATG+TGG | - | chr6_1:27650405-27650424 | None:intergenic | 40.0% |
| ATCCGGTATTCAATATGCGT+CGG | - | chr6_1:27650471-27650490 | None:intergenic | 40.0% | |
| ! | GCATTGGCACTTCAAATTGA+AGG | - | chr6_1:27650497-27650516 | None:intergenic | 40.0% |
| ! | TCAATTTGAAGTGCCAATGC+TGG | + | chr6_1:27650497-27650516 | Msa0880800:intron | 40.0% |
| TATGAAAGAGTCCAGTCACT+AGG | - | chr6_1:27650631-27650650 | None:intergenic | 40.0% | |
| ACATTAGATTGGACTTTGGG+AGG | - | chr6_1:27650667-27650686 | None:intergenic | 40.0% | |
| TGTTCCTGCAGAAATTGTTC+AGG | + | chr6_1:27650706-27650725 | Msa0880800:CDS | 40.0% | |
| CTGCAGAAATTGTTCAGGAT+GGG | + | chr6_1:27650711-27650730 | Msa0880800:CDS | 40.0% | |
| TGCAGAAATTGTTCAGGATG+GGG | + | chr6_1:27650712-27650731 | Msa0880800:CDS | 40.0% | |
| TTCTCTTCCATAGAAGCTAC+TGG | - | chr6_1:27650860-27650879 | None:intergenic | 40.0% | |
| CTATGGAAGAGAAGAACAAC+TGG | + | chr6_1:27650867-27650886 | Msa0880800:CDS | 40.0% | |
| ATCACTTAGCAGACTAAAGG+AGG | + | chr6_1:27650970-27650989 | Msa0880800:CDS | 40.0% | |
| !! | GCATCTTTAGCTTGCGAAAA+TGG | - | chr6_1:27651076-27651095 | None:intergenic | 40.0% |
| ACTACTGAATATGATGCGCA+AGG | + | chr6_1:27651166-27651185 | Msa0880800:CDS | 40.0% | |
| CTTCATTGGGCAGCATATTA+CGG | + | chr6_1:27651298-27651317 | Msa0880800:CDS | 40.0% | |
| CTAACATGTTTGAACAAGCG+GGG | - | chr6_1:27651343-27651362 | None:intergenic | 40.0% | |
| TAGACAAACATGGTCAGCAA+GGG | - | chr6_1:27651451-27651470 | None:intergenic | 40.0% | |
| TTAGACAAACATGGTCAGCA+AGG | - | chr6_1:27651452-27651471 | None:intergenic | 40.0% | |
| TTAATCCAAGGTAAGTGAGC+CGG | + | chr6_1:27651521-27651540 | Msa0880800:intron | 40.0% | |
| GTCCAAATGAATCATGTGCA+AGG | + | chr6_1:27651563-27651582 | Msa0880800:intron | 40.0% | |
| CCAAATGAATCATGTGCAAG+GGG | + | chr6_1:27651565-27651584 | Msa0880800:intron | 40.0% | |
| CAAATGAATCATGTGCAAGG+GGG | + | chr6_1:27651566-27651585 | Msa0880800:intron | 40.0% | |
| CATGGTATAGTTTAGCCGAA+TGG | - | chr6_1:27651614-27651633 | None:intergenic | 40.0% | |
| CATTCGGCTAAACTATACCA+TGG | + | chr6_1:27651612-27651631 | Msa0880800:intron | 40.0% | |
| CTACAAACTTAAAGGACCCA+TGG | - | chr6_1:27651632-27651651 | None:intergenic | 40.0% | |
| ACCGAACTGAACCAAAGTTA+TGG | + | chr6_1:27651844-27651863 | Msa0880800:intron | 40.0% | |
| !! | TTCGGTTCGGTATGGTTAAT+AGG | - | chr6_1:27651890-27651909 | None:intergenic | 40.0% |
| ! | AACAGAGGGTAGTATTGGAT+AGG | - | chr6_1:27652476-27652495 | None:intergenic | 40.0% |
| ATTCAGGAAGCTCAAAAACG+AGG | + | chr6_1:27652857-27652876 | Msa0880800:intron | 40.0% | |
| GATCCAACAAAGAGTTCAAG+TGG | + | chr6_1:27653440-27653459 | Msa0880800:intron | 40.0% | |
| !! | TTGGTTCGGTTCAAACAGTT+CGG | + | chr6_1:27653496-27653515 | Msa0880800:intron | 40.0% |
| TCGTGAACCATTGTAATGGT+CGG | + | chr6_1:27653577-27653596 | Msa0880800:intron | 40.0% | |
| GCGTGAAGATATGAATGGTT+TGG | - | chr6_1:27653931-27653950 | None:intergenic | 40.0% | |
| CCATTGCGTGAAGATATGAA+TGG | - | chr6_1:27653936-27653955 | None:intergenic | 40.0% | |
| CCATTCATATCTTCACGCAA+TGG | + | chr6_1:27653933-27653952 | Msa0880800:intron | 40.0% | |
| AAGTCAACCAACTACTCGAA+AGG | - | chr6_1:27653968-27653987 | None:intergenic | 40.0% | |
| ! | TTTCGAGTAGTTGGTTGACT+TGG | + | chr6_1:27653967-27653986 | Msa0880800:intron | 40.0% |
| TTGTGTCTTCAGGGAGAAAA+TGG | + | chr6_1:27654186-27654205 | Msa0880800:intron | 40.0% | |
| TGGCTTAGCAGCTTATCTTT+CGG | + | chr6_1:27654318-27654337 | Msa0880800:CDS | 40.0% | |
| TTCAATGACATGAGCTTAGC+TGG | + | chr6_1:27654361-27654380 | Msa0880800:CDS | 40.0% | |
| AGCTTAGCTGGAAATATCAG+TGG | + | chr6_1:27654373-27654392 | Msa0880800:CDS | 40.0% | |
| GTAAGGTTCTCGGAATTTAC+TGG | - | chr6_1:27654424-27654443 | None:intergenic | 40.0% | |
| GCTCTATGTGAAAGATACAC+TGG | + | chr6_1:27654453-27654472 | Msa0880800:CDS | 40.0% | |
| ! | CACGCATACAAGAAGCATAT+AGG | + | chr6_1:27654506-27654525 | Msa0880800:CDS | 40.0% |
| CGCCTCTGTTTGTAACTTTA+AGG | - | chr6_1:27654539-27654558 | None:intergenic | 40.0% | |
| CTTTGTCTCAAAATTGCGGA+AGG | - | chr6_1:27654626-27654645 | None:intergenic | 40.0% | |
| CTCTACGAATCTTCCATGTA+CGG | - | chr6_1:27654687-27654706 | None:intergenic | 40.0% | |
| GTTGCTGAACTGACGAATAA+AGG | - | chr6_1:27654856-27654875 | None:intergenic | 40.0% | |
| CGTTGGCGTTTAAAGAGAAA+GGG | + | chr6_1:27654989-27655008 | Msa0880800:CDS | 40.0% | |
| ATTCTTCCTCGGTATTAAGC+CGG | - | chr6_1:27655027-27655046 | None:intergenic | 40.0% | |
| GCTTAATACCGAGGAAGAAT+CGG | + | chr6_1:27655027-27655046 | Msa0880800:CDS | 40.0% | |
| CTTAATACCGAGGAAGAATC+GGG | + | chr6_1:27655028-27655047 | Msa0880800:CDS | 40.0% | |
| ATGCAGAGGAGGAATTCTTT+CGG | + | chr6_1:27655071-27655090 | Msa0880800:CDS | 40.0% | |
| CTTCTTGCGCTTTCTTAGAA+CGG | - | chr6_1:27655159-27655178 | None:intergenic | 40.0% | |
| AAGCGCAAGAAGATTATAGG+AGG | + | chr6_1:27655167-27655186 | Msa0880800:CDS | 40.0% | |
| AGAATATTCCTTTGTGCAGC+TGG | + | chr6_1:27655298-27655317 | Msa0880800:intron | 40.0% | |
| TCTCTATTTCCTTGCACAGT+TGG | + | chr6_1:27655593-27655612 | Msa0880800:three_prime_UTR | 40.0% | |
| TCTGCTCTGTTCGGATTGAT+TGG | - | chr6_1:27645862-27645881 | None:intergenic | 45.0% | |
| AACTTACCGGGTCAACTTGT+TGG | + | chr6_1:27646056-27646075 | Msa0880800:CDS | 45.0% | |
| ! | TCTGATCCAACAAGTTGACC+CGG | - | chr6_1:27646065-27646084 | None:intergenic | 45.0% |
| CATGGATTCCACACATTGCA+AGG | + | chr6_1:27646089-27646108 | Msa0880800:CDS | 45.0% | |
| GAAGCTTACCTTGCAATGTG+TGG | - | chr6_1:27646100-27646119 | None:intergenic | 45.0% | |
| ! | TGTCCCAACATTTAGTGGGT+TGG | + | chr6_1:27646318-27646337 | Msa0880800:intron | 45.0% |
| GGACCAACCCACTAAATGTT+GGG | - | chr6_1:27646324-27646343 | None:intergenic | 45.0% | |
| AGTACAGGTAAGATGTGCAG+CGG | - | chr6_1:27646570-27646589 | None:intergenic | 45.0% | |
| TGTTTGACCGCAAGATGCTT+CGG | + | chr6_1:27647142-27647161 | Msa0880800:CDS | 45.0% | |
| CACAGACCTCTTGTGTTTCA+CGG | - | chr6_1:27647602-27647621 | None:intergenic | 45.0% | |
| !!! | GTCTTTTCGATTGGTCTGGT+TGG | + | chr6_1:27647862-27647881 | Msa0880800:intron | 45.0% |
| AAGAGACTGCACACTACACA+CGG | - | chr6_1:27647904-27647923 | None:intergenic | 45.0% | |
| !! | CTAGCACTGATGAGTTAGGT+AGG | - | chr6_1:27648656-27648675 | None:intergenic | 45.0% |
| CTACCTAACTCATCAGTGCT+AGG | + | chr6_1:27648654-27648673 | Msa0880800:intron | 45.0% | |
| !! | CATCCTAGCACTGATGAGTT+AGG | - | chr6_1:27648660-27648679 | None:intergenic | 45.0% |
| GTGGCTCATGATACAGTTTC+AGG | + | chr6_1:27648818-27648837 | Msa0880800:intron | 45.0% | |
| ACAGAATCCATGGTGCAGAT+GGG | - | chr6_1:27648890-27648909 | None:intergenic | 45.0% | |
| GGACCAAAACTGCATATGCT+GGG | + | chr6_1:27648928-27648947 | Msa0880800:CDS | 45.0% | |
| GACCAAAACTGCATATGCTG+GGG | + | chr6_1:27648929-27648948 | Msa0880800:CDS | 45.0% | |
| ACCAAAACTGCATATGCTGG+GGG | + | chr6_1:27648930-27648949 | Msa0880800:CDS | 45.0% | |
| ACTCGAAGTAGAGATGGCAA+TGG | + | chr6_1:27649003-27649022 | Msa0880800:intron | 45.0% | |
| CTCGAAGTAGAGATGGCAAT+GGG | + | chr6_1:27649004-27649023 | Msa0880800:intron | 45.0% | |
| TCGAAGTAGAGATGGCAATG+GGG | + | chr6_1:27649005-27649024 | Msa0880800:intron | 45.0% | |
| ! | GTACTGATAGAAGATCCCAC+AGG | - | chr6_1:27649067-27649086 | None:intergenic | 45.0% |
| CAGTCAAAAGCCATGAACTG+AGG | + | chr6_1:27649402-27649421 | Msa0880800:CDS | 45.0% | |
| GTGCTTTCCAGACATGTAAC+TGG | - | chr6_1:27649538-27649557 | None:intergenic | 45.0% | |
| ATTGCTCACTGCAATTGGCT+GGG | - | chr6_1:27649836-27649855 | None:intergenic | 45.0% | |
| TATTGCTCACTGCAATTGGC+TGG | - | chr6_1:27649837-27649856 | None:intergenic | 45.0% | |
| AACCATCCTGTCTCTTCAAG+TGG | + | chr6_1:27649931-27649950 | Msa0880800:CDS | 45.0% | |
| TCAACACCACTTGAAGAGAC+AGG | - | chr6_1:27649940-27649959 | None:intergenic | 45.0% | |
| TTGCAAAGTCAGGACAGCTT+TGG | + | chr6_1:27649988-27650007 | Msa0880800:CDS | 45.0% | |
| !! | TCAGGACAGCTTTGGAATGT+GGG | + | chr6_1:27649996-27650015 | Msa0880800:CDS | 45.0% |
| CACCGACGCATATTGAATAC+CGG | + | chr6_1:27650466-27650485 | Msa0880800:intron | 45.0% | |
| ! | TTGAAGTGCCAATGCTGGAT+AGG | + | chr6_1:27650502-27650521 | Msa0880800:intron | 45.0% |
| CCATCCTGAACAATTTCTGC+AGG | - | chr6_1:27650713-27650732 | None:intergenic | 45.0% | |
| CCTGCAGAAATTGTTCAGGA+TGG | + | chr6_1:27650710-27650729 | Msa0880800:CDS | 45.0% | |
| TTCACAAATCCCGGAGAATG+CGG | - | chr6_1:27650758-27650777 | None:intergenic | 45.0% | |
| CAACTTGGCTGATAGGGTTA+TGG | - | chr6_1:27650802-27650821 | None:intergenic | 45.0% | |
| GCTACTGGATCATGCAAAAC+AGG | - | chr6_1:27650845-27650864 | None:intergenic | 45.0% | |
| GCATGATCCAGTAGCTTCTA+TGG | + | chr6_1:27650850-27650869 | Msa0880800:CDS | 45.0% | |
| TTAGCAGACTAAAGGAGGCA+AGG | + | chr6_1:27650975-27650994 | Msa0880800:CDS | 45.0% | |
| TAGCAGACTAAAGGAGGCAA+GGG | + | chr6_1:27650976-27650995 | Msa0880800:CDS | 45.0% | |
| CAAGCTAAAGATGCCCTGTT+TGG | + | chr6_1:27651082-27651101 | Msa0880800:CDS | 45.0% | |
| CAGGCTTATCGCTAGATTTC+CGG | + | chr6_1:27651254-27651273 | Msa0880800:CDS | 45.0% | |
| AGGCTTATCGCTAGATTTCC+GGG | + | chr6_1:27651255-27651274 | Msa0880800:CDS | 45.0% | |
| CCGTCCATCCAAATTTATCC+CGG | - | chr6_1:27651276-27651295 | None:intergenic | 45.0% | |
| CCGGGATAAATTTGGATGGA+CGG | + | chr6_1:27651273-27651292 | Msa0880800:CDS | 45.0% | |
| TTGAAGCATGGACAATGCAC+CGG | - | chr6_1:27651543-27651562 | None:intergenic | 45.0% | |
| CCCCTTGCACATGATTCATT+TGG | - | chr6_1:27651568-27651587 | None:intergenic | 45.0% | |
| ! | TGGTCCTTTAAGTTTAGGGG+TGG | + | chr6_1:27651725-27651744 | Msa0880800:intron | 45.0% |
| ! | GGTCCTTTAAGTTTAGGGGT+GGG | + | chr6_1:27651726-27651745 | Msa0880800:intron | 45.0% |
| ATGCCCACCCCTAAACTTAA+AGG | - | chr6_1:27651732-27651751 | None:intergenic | 45.0% | |
| ! | TTTAAGTTTAGGGGTGGGCA+TGG | + | chr6_1:27651731-27651750 | Msa0880800:intron | 45.0% |
| !!! | TCGGTTCGGTTCGGTTTTTT+GGG | - | chr6_1:27651766-27651785 | None:intergenic | 45.0% |
| !!! | TTCGGTTCGGTTCGGTTTTT+TGG | - | chr6_1:27651767-27651786 | None:intergenic | 45.0% |
| !! | AATTTCGGTTCGGTTCGGTT+CGG | - | chr6_1:27651775-27651794 | None:intergenic | 45.0% |
| !!! | TGTTTTGGTTCGGTTCGGTA+TGG | - | chr6_1:27651898-27651917 | None:intergenic | 45.0% |
| TCAGAGATCCGAGCTTATAG+TGG | - | chr6_1:27652816-27652835 | None:intergenic | 45.0% | |
| TCGGTTCAAACAGTTCGGTT+CGG | + | chr6_1:27653501-27653520 | Msa0880800:intron | 45.0% | |
| !! | GGTTCAAGATGGTTCGGTTA+TGG | + | chr6_1:27653522-27653541 | Msa0880800:intron | 45.0% |
| CGGTTCGTGAACCATTGTAA+TGG | + | chr6_1:27653573-27653592 | Msa0880800:intron | 45.0% | |
| ! | TTGCAACTTTGCTGTCAGCT+GGG | + | chr6_1:27654209-27654228 | Msa0880800:CDS | 45.0% |
| ATCCAACTCACCAAAACCCT+GGG | + | chr6_1:27654254-27654273 | Msa0880800:CDS | 45.0% | |
| CCTCGTATAAGCAAGATCAG+CGG | - | chr6_1:27654290-27654309 | None:intergenic | 45.0% | |
| CGCTGATCTTGCTTATACGA+GGG | + | chr6_1:27654288-27654307 | Msa0880800:CDS | 45.0% | |
| GCTGATCTTGCTTATACGAG+GGG | + | chr6_1:27654289-27654308 | Msa0880800:CDS | 45.0% | |
| GCTTATACGAGGGGTTATCA+TGG | + | chr6_1:27654298-27654317 | Msa0880800:CDS | 45.0% | |
| TGGAAATATCAGTGGCTCAC+TGG | + | chr6_1:27654381-27654400 | Msa0880800:CDS | 45.0% | |
| AAATTCCGAGAACCTTACCG+AGG | + | chr6_1:27654426-27654445 | Msa0880800:CDS | 45.0% | |
| TTTCACATAGAGCTGCTCCT+CGG | - | chr6_1:27654446-27654465 | None:intergenic | 45.0% | |
| AAGATACACTGGCAGCTTAC+CGG | + | chr6_1:27654464-27654483 | Msa0880800:CDS | 45.0% | |
| ! | TTTTGCGTGCTTCAGCTTCT+GGG | - | chr6_1:27654576-27654595 | None:intergenic | 45.0% |
| ! | ATTTTGCGTGCTTCAGCTTC+TGG | - | chr6_1:27654577-27654596 | None:intergenic | 45.0% |
| ! | ATACAATGCAGGCTGCTTTC+AGG | + | chr6_1:27654897-27654916 | Msa0880800:intron | 45.0% |
| AATCATTTGGTCAGTTGGCG+TGG | + | chr6_1:27654949-27654968 | Msa0880800:CDS | 45.0% | |
| TTGAGAAAGCAGTGTTGCGT+TGG | + | chr6_1:27654972-27654991 | Msa0880800:CDS | 45.0% | |
| ! | GCGTTGGCGTTTAAAGAGAA+AGG | + | chr6_1:27654988-27655007 | Msa0880800:CDS | 45.0% |
| TTAAAGAGAAAGGGCTTCCG+TGG | + | chr6_1:27654998-27655017 | Msa0880800:CDS | 45.0% | |
| TAAAGAGAAAGGGCTTCCGT+GGG | + | chr6_1:27654999-27655018 | Msa0880800:CDS | 45.0% | |
| GAATCAGCAAAGTGATGCAG+AGG | + | chr6_1:27655057-27655076 | Msa0880800:CDS | 45.0% | |
| !! | AGGAATTCTTTCGGACTGGT+AGG | + | chr6_1:27655080-27655099 | Msa0880800:CDS | 45.0% |
| ACTTCTCTCGACACGTTCTT+CGG | - | chr6_1:27655113-27655132 | None:intergenic | 45.0% | |
| ! | GAGAAGTGTAATACGAGTGC+AGG | + | chr6_1:27655126-27655145 | Msa0880800:CDS | 45.0% |
| GTTGGCCCTTAATCAAGCAA+AGG | + | chr6_1:27655195-27655214 | Msa0880800:CDS | 45.0% | |
| ATTCCTTTGTGCAGCTGGAA+CGG | + | chr6_1:27655303-27655322 | Msa0880800:intron | 45.0% | |
| !! | AACTTTGGGACGGCATATAG+AGG | - | chr6_1:27655515-27655534 | None:intergenic | 45.0% |
| ! | GCTTAAAGCTCCAGTTTTCG+AGG | - | chr6_1:27655620-27655639 | None:intergenic | 45.0% |
| !!! | CATTTATTTTAATTTTTTTT+AGG | + | chr6_1:27646384-27646403 | Msa0880800:intron | 5.0% |
| AGAGAAGGGTCTGCTCTGTT+CGG | - | chr6_1:27645871-27645890 | None:intergenic | 50.0% | |
| GGGACCAACCCACTAAATGT+TGG | - | chr6_1:27646325-27646344 | None:intergenic | 50.0% | |
| GTACAGGTAAGATGTGCAGC+GGG | - | chr6_1:27646569-27646588 | None:intergenic | 50.0% | |
| CCATAATGCTCGCAACATCG+AGG | - | chr6_1:27646636-27646655 | None:intergenic | 50.0% | |
| CCTCGATGTTGCGAGCATTA+TGG | + | chr6_1:27646633-27646652 | Msa0880800:CDS | 50.0% | |
| CGATGTTGCGAGCATTATGG+AGG | + | chr6_1:27646636-27646655 | Msa0880800:CDS | 50.0% | |
| TGGAGGAAGCAAGAACGAGA+TGG | + | chr6_1:27646653-27646672 | Msa0880800:CDS | 50.0% | |
| GAACAAGGACGATGTGTTCC+AGG | - | chr6_1:27647575-27647594 | None:intergenic | 50.0% | |
| GACAGAATCCATGGTGCAGA+TGG | - | chr6_1:27648891-27648910 | None:intergenic | 50.0% | |
| GGGACCAAAACTGCATATGC+TGG | + | chr6_1:27648927-27648946 | Msa0880800:CDS | 50.0% | |
| ! | ACCCCCAGCATATGCAGTTT+TGG | - | chr6_1:27648934-27648953 | None:intergenic | 50.0% |
| AAGTAGAGATGGCAATGGGG+TGG | + | chr6_1:27649008-27649027 | Msa0880800:intron | 50.0% | |
| AGTAGAGATGGCAATGGGGT+GGG | + | chr6_1:27649009-27649028 | Msa0880800:intron | 50.0% | |
| ATCCCACAGGACAGAGAGTA+GGG | - | chr6_1:27649054-27649073 | None:intergenic | 50.0% | |
| AACACCTCTGCTGTGCCTAA+CGG | + | chr6_1:27649479-27649498 | Msa0880800:CDS | 50.0% | |
| CTGTGCCTAACGGAGGTAAA+TGG | + | chr6_1:27649489-27649508 | Msa0880800:intron | 50.0% | |
| ! | CAGATGCATTGTTGGCTACC+TGG | - | chr6_1:27649786-27649805 | None:intergenic | 50.0% |
| CACCACTTGAAGAGACAGGA+TGG | - | chr6_1:27649936-27649955 | None:intergenic | 50.0% | |
| !! | GTCAGGACAGCTTTGGAATG+TGG | + | chr6_1:27649995-27650014 | Msa0880800:CDS | 50.0% |
| TTCGTGCAGATCCTAGTGAC+TGG | + | chr6_1:27650617-27650636 | Msa0880800:intron | 50.0% | |
| TTGGATGGACGGCTCTTCAT+TGG | + | chr6_1:27651284-27651303 | Msa0880800:CDS | 50.0% | |
| TGGATGGACGGCTCTTCATT+GGG | + | chr6_1:27651285-27651304 | Msa0880800:CDS | 50.0% | |
| ATTGGGCAGCATATTACGGC+AGG | + | chr6_1:27651302-27651321 | Msa0880800:CDS | 50.0% | |
| AAACCGAACCGAACCGTTTC+AGG | + | chr6_1:27651811-27651830 | Msa0880800:intron | 50.0% | |
| !! | AAGCCTGAAACGGTTCGGTT+CGG | - | chr6_1:27651817-27651836 | None:intergenic | 50.0% |
| ! | GGTTAGCTCCAAGCCTGAAA+CGG | - | chr6_1:27651827-27651846 | None:intergenic | 50.0% |
| !! | CAGTTCGGTTCGGTTCAAGA+TGG | + | chr6_1:27653511-27653530 | Msa0880800:intron | 50.0% |
| !! | CGGTTCGGTTCAAGATGGTT+CGG | + | chr6_1:27653516-27653535 | Msa0880800:intron | 50.0% |
| ! | GTTGCAACTTTGCTGTCAGC+TGG | + | chr6_1:27654208-27654227 | Msa0880800:CDS | 50.0% |
| ! | TGCAACTTTGCTGTCAGCTG+GGG | + | chr6_1:27654210-27654229 | Msa0880800:CDS | 50.0% |
| GGCAAAGCCAAACTTGGTCA+CGG | + | chr6_1:27654231-27654250 | Msa0880800:CDS | 50.0% | |
| GTTGGATCCGTGACCAAGTT+TGG | - | chr6_1:27654241-27654260 | None:intergenic | 50.0% | |
| GATCCAACTCACCAAAACCC+TGG | + | chr6_1:27654253-27654272 | Msa0880800:CDS | 50.0% | |
| TCCAACTCACCAAAACCCTG+GGG | + | chr6_1:27654255-27654274 | Msa0880800:CDS | 50.0% | |
| CCGCTGATCTTGCTTATACG+AGG | + | chr6_1:27654287-27654306 | Msa0880800:CDS | 50.0% | |
| TGGCTCACTGGAAACTAGCA+CGG | + | chr6_1:27654393-27654412 | Msa0880800:CDS | 50.0% | |
| ! | TTGTATGCGTGCTGCTGCAT+CGG | - | chr6_1:27654497-27654516 | None:intergenic | 50.0% |
| CTGATCTCCCGATTCTTCCT+CGG | - | chr6_1:27655038-27655057 | None:intergenic | 50.0% | |
| TCAGCAAAGTGATGCAGAGG+AGG | + | chr6_1:27655060-27655079 | Msa0880800:CDS | 50.0% | |
| GAGGAGGAATTCTTTCGGAC+TGG | + | chr6_1:27655076-27655095 | Msa0880800:CDS | 50.0% | |
| TTCCTTTGTGCAGCTGGAAC+GGG | + | chr6_1:27655304-27655323 | Msa0880800:intron | 50.0% | |
| GCACACTCAGCAGAATGTGA+AGG | + | chr6_1:27655416-27655435 | Msa0880800:three_prime_UTR | 50.0% | |
| ACTCAGCAGAATGTGAAGGC+AGG | + | chr6_1:27655420-27655439 | Msa0880800:three_prime_UTR | 50.0% | |
| AGCAGAATGTGAAGGCAGGT+TGG | + | chr6_1:27655424-27655443 | Msa0880800:three_prime_UTR | 50.0% | |
| AGAGGCCAATCGCCAATGAA+AGG | - | chr6_1:27655497-27655516 | None:intergenic | 50.0% | |
| TTTCGAGGTCCAACTGTGCA+AGG | - | chr6_1:27655605-27655624 | None:intergenic | 50.0% | |
| CACAGTTGGACCTCGAAAAC+TGG | + | chr6_1:27655607-27655626 | Msa0880800:three_prime_UTR | 50.0% | |
| !! | AACTGGAGCTTTAAGCACCC+TGG | + | chr6_1:27655624-27655643 | Msa0880800:three_prime_UTR | 50.0% |
| AGATGGCAATGGGGTGGGAT+GGG | + | chr6_1:27649014-27649033 | Msa0880800:intron | 55.0% | |
| TTCCCCTACTCTCTGTCCTG+TGG | + | chr6_1:27649048-27649067 | Msa0880800:intron | 55.0% | |
| TCCCCTACTCTCTGTCCTGT+GGG | + | chr6_1:27649049-27649068 | Msa0880800:intron | 55.0% | |
| TCCCACAGGACAGAGAGTAG+GGG | - | chr6_1:27649053-27649072 | None:intergenic | 55.0% | |
| GATCCCACAGGACAGAGAGT+AGG | - | chr6_1:27649055-27649074 | None:intergenic | 55.0% | |
| GCTCGTGAAGCCTCAGTTCA+TGG | - | chr6_1:27649415-27649434 | None:intergenic | 55.0% | |
| TTACTGATGTGTCCCCTGCG+TGG | + | chr6_1:27650157-27650176 | Msa0880800:CDS | 55.0% | |
| TACTGATGTGTCCCCTGCGT+GGG | + | chr6_1:27650158-27650177 | Msa0880800:CDS | 55.0% | |
| ACGGACACCACATTCAGCAC+CGG | + | chr6_1:27650395-27650414 | Msa0880800:intron | 55.0% | |
| ! | CGTCGGTGTCTGACACATGT+GGG | - | chr6_1:27650454-27650473 | None:intergenic | 55.0% |
| AATGCGGTGGTACCCAGCAA+CGG | - | chr6_1:27650742-27650761 | None:intergenic | 55.0% | |
| ACAAATCCCGGAGAATGCGG+TGG | - | chr6_1:27650755-27650774 | None:intergenic | 55.0% | |
| !! | ATGCACCGGCTCACTTACCT+TGG | - | chr6_1:27651529-27651548 | None:intergenic | 55.0% |
| GTTTAGGGGTGGGCATGGTT+CGG | + | chr6_1:27651736-27651755 | Msa0880800:intron | 55.0% | |
| GAACCGAACCGTTTCAGGCT+TGG | + | chr6_1:27651816-27651835 | Msa0880800:intron | 55.0% | |
| GCTCCAAGCCTGAAACGGTT+CGG | - | chr6_1:27651822-27651841 | None:intergenic | 55.0% | |
| ! | TTGGTTCAGTTCGGTTCGCG+CGG | + | chr6_1:27653606-27653625 | Msa0880800:intron | 55.0% |
| AGCTGGGGCAAAGCCAAACT+TGG | + | chr6_1:27654225-27654244 | Msa0880800:CDS | 55.0% | |
| CCAACTCACCAAAACCCTGG+GGG | + | chr6_1:27654256-27654275 | Msa0880800:CDS | 55.0% | |
| ! | CAGTACATCCCCCAGGGTTT+TGG | - | chr6_1:27654267-27654286 | None:intergenic | 55.0% |
| CTGCTCCTCGGTAAGGTTCT+CGG | - | chr6_1:27654434-27654453 | None:intergenic | 55.0% | |
| CATAGAGCTGCTCCTCGGTA+AGG | - | chr6_1:27654441-27654460 | None:intergenic | 55.0% | |
| TTCCCGTTCCAGCTGCACAA+AGG | - | chr6_1:27655309-27655328 | None:intergenic | 55.0% | |
| GCTCGCAACATCGAGGTCTG+AGG | - | chr6_1:27646629-27646648 | None:intergenic | 60.0% | |
| CCATGGTGCAGATGGGTCAG+AGG | - | chr6_1:27648883-27648902 | None:intergenic | 60.0% | |
| CCTCTGACCCATCTGCACCA+TGG | + | chr6_1:27648880-27648899 | Msa0880800:CDS | 60.0% | |
| GAGATGGCAATGGGGTGGGA+TGG | + | chr6_1:27649013-27649032 | Msa0880800:intron | 60.0% | |
| AATGGGGTGGGATGGGAGCT+GGG | + | chr6_1:27649021-27649040 | Msa0880800:intron | 60.0% | |
| ACCTCTGCTGTGCCTAACGG+AGG | + | chr6_1:27649482-27649501 | Msa0880800:CDS | 60.0% | |
| ACCTCCGTTAGGCACAGCAG+AGG | - | chr6_1:27649486-27649505 | None:intergenic | 60.0% | |
| TGTGGAAGACACCCACGCAG+GGG | - | chr6_1:27650172-27650191 | None:intergenic | 60.0% | |
| CTGTGGAAGACACCCACGCA+GGG | - | chr6_1:27650173-27650192 | None:intergenic | 60.0% | |
| TCTGTGGAAGACACCCACGC+AGG | - | chr6_1:27650174-27650193 | None:intergenic | 60.0% | |
| ! | GCGTCGGTGTCTGACACATG+TGG | - | chr6_1:27650455-27650474 | None:intergenic | 60.0% |
| AGGATGGGGTCTACCGTTGC+TGG | + | chr6_1:27650726-27650745 | Msa0880800:CDS | 60.0% | |
| GGATGGGGTCTACCGTTGCT+GGG | + | chr6_1:27650727-27650746 | Msa0880800:CDS | 60.0% | |
| CTGGGTACCACCGCATTCTC+CGG | + | chr6_1:27650745-27650764 | Msa0880800:CDS | 60.0% | |
| TGGGTACCACCGCATTCTCC+GGG | + | chr6_1:27650746-27650765 | Msa0880800:CDS | 60.0% | |
| ! | TCAGTTCGGTTCGCGCGGTT+CGG | + | chr6_1:27653611-27653630 | Msa0880800:intron | 60.0% |
| !! | CCCCCAGGGTTTTGGTGAGT+TGG | - | chr6_1:27654259-27654278 | None:intergenic | 60.0% |
| CGGTATTAAGCCGGAGCCCA+CGG | - | chr6_1:27655018-27655037 | None:intergenic | 60.0% | |
| TGGGCTCCGGCTTAATACCG+AGG | + | chr6_1:27655018-27655037 | Msa0880800:CDS | 60.0% | |
| CAATGGGGTGGGATGGGAGC+TGG | + | chr6_1:27649020-27649039 | Msa0880800:intron | 65.0% | |
| !! | TCGGTTCGCGCGGTTCGGTT+CGG | + | chr6_1:27653616-27653635 | Msa0880800:intron | 65.0% |
| !! | GCGCGGTTCGGTTCGGTTCA+TGG | + | chr6_1:27653623-27653642 | Msa0880800:intron | 65.0% |
| CAGCGGCAGTACATCCCCCA+GGG | - | chr6_1:27654273-27654292 | None:intergenic | 65.0% | |
| TCAGCGGCAGTACATCCCCC+AGG | - | chr6_1:27654274-27654293 | None:intergenic | 65.0% | |
| ! | CTGCTGCATCGGCAGCTGTC+CGG | - | chr6_1:27654486-27654505 | None:intergenic | 65.0% |
| GCGTGCTTCAGCTTCTGGGC+TGG | - | chr6_1:27654572-27654591 | None:intergenic | 65.0% | |
| GAAAGGGCTTCCGTGGGCTC+CGG | + | chr6_1:27655005-27655024 | Msa0880800:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 27645768 | 27655812 | 27645768 | ID=Msa0880800;Name=Msa0880800 |
| chr6_1 | mRNA | 27645768 | 27655812 | 27645768 | ID=Msa0880800-mRNA-1;Parent=Msa0880800;Name=Msa0880800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=171|1|1|1|0.92|0.85|14|436|924 |
| chr6_1 | exon | 27645768 | 27645903 | 27645768 | ID=Msa0880800-mRNA-1:exon:6775;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27646006 | 27646110 | 27646006 | ID=Msa0880800-mRNA-1:exon:6776;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27646632 | 27646757 | 27646632 | ID=Msa0880800-mRNA-1:exon:6777;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27647127 | 27647242 | 27647127 | ID=Msa0880800-mRNA-1:exon:6778;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27647362 | 27647450 | 27647362 | ID=Msa0880800-mRNA-1:exon:6779;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27647569 | 27647614 | 27647569 | ID=Msa0880800-mRNA-1:exon:6780;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27648834 | 27648951 | 27648834 | ID=Msa0880800-mRNA-1:exon:6781;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27649384 | 27649503 | 27649384 | ID=Msa0880800-mRNA-1:exon:6782;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27649593 | 27649651 | 27649593 | ID=Msa0880800-mRNA-1:exon:6783;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27649787 | 27650203 | 27649787 | ID=Msa0880800-mRNA-1:exon:6784;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27650626 | 27651323 | 27650626 | ID=Msa0880800-mRNA-1:exon:6785;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27654198 | 27654744 | 27654198 | ID=Msa0880800-mRNA-1:exon:6786;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27654908 | 27655216 | 27654908 | ID=Msa0880800-mRNA-1:exon:6787;Parent=Msa0880800-mRNA-1 |
| chr6_1 | exon | 27655317 | 27655812 | 27655317 | ID=Msa0880800-mRNA-1:exon:6788;Parent=Msa0880800-mRNA-1 |
| chr6_1 | five_prime_UTR | 27645768 | 27645903 | 27645768 | ID=Msa0880800-mRNA-1:five_prime_utr;Parent=Msa0880800-mRNA-1 |
| chr6_1 | five_prime_UTR | 27646006 | 27646040 | 27646006 | ID=Msa0880800-mRNA-1:five_prime_utr;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27646041 | 27646110 | 27646041 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27646632 | 27646757 | 27646632 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27647127 | 27647242 | 27647127 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27647362 | 27647450 | 27647362 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27647569 | 27647614 | 27647569 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27648834 | 27648951 | 27648834 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27649384 | 27649503 | 27649384 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27649593 | 27649651 | 27649593 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27649787 | 27650203 | 27649787 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27650626 | 27651323 | 27650626 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27654198 | 27654744 | 27654198 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27654908 | 27655216 | 27654908 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | CDS | 27655317 | 27655376 | 27655317 | ID=Msa0880800-mRNA-1:cds;Parent=Msa0880800-mRNA-1 |
| chr6_1 | three_prime_UTR | 27655377 | 27655812 | 27655377 | ID=Msa0880800-mRNA-1:three_prime_utr;Parent=Msa0880800-mRNA-1 |
| Gene Sequence |
| Protein sequence |