AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1436590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436590 MtrunA17_Chr4g0068161 98.377 924 15 0 1 924 1 924 0.0 1905
Msa1436590 MtrunA17_Chr2g0294711 71.227 921 252 3 1 920 1 909 0.0 1365
Msa1436590 MtrunA17_Chr2g0279141 31.176 1020 556 25 25 917 13 1013 4.70e-132 422
Msa1436590 MtrunA17_Chr8g0382191 32.857 630 388 13 310 910 432 1055 4.29e-91 312
Msa1436590 MtrunA17_Chr8g0382191 55.725 131 58 0 25 155 9 139 3.50e-41 164
Msa1436590 MtrunA17_Chr8g0377501 35.126 595 323 19 338 907 387 943 2.42e-84 291
Msa1436590 MtrunA17_Chr8g0377501 48.276 145 73 1 24 166 13 157 5.55e-39 157
Msa1436590 MtrunA17_Chr4g0050401 32.039 618 362 15 316 897 386 981 2.30e-79 278
Msa1436590 MtrunA17_Chr4g0050401 54.032 124 57 0 25 148 13 136 7.66e-37 150
Msa1436590 MtrunA17_Chr3g0122351 33.167 603 338 17 347 919 368 935 5.49e-78 273
Msa1436590 MtrunA17_Chr3g0122351 52.419 124 59 0 26 149 8 131 6.71e-38 153
Msa1436590 MtrunA17_Chr8g0382181 45.192 104 54 1 67 170 8 108 1.15e-22 102
Msa1436590 MtrunA17_Chr8g0382181 31.522 92 63 0 367 458 374 465 5.94e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436590 AT3G16940.1 55.827 901 327 8 9 907 7 838 0.0 983
Msa1436590 AT3G16940.3 55.227 880 323 8 30 907 1 811 0.0 944
Msa1436590 AT3G16940.2 54.523 796 296 7 9 802 7 738 0.0 840
Msa1436590 AT5G09410.1 31.038 944 559 16 25 897 16 938 1.45e-130 417
Msa1436590 AT5G09410.3 30.155 965 558 17 25 897 75 1015 2.59e-121 395
Msa1436590 AT2G22300.3 35.072 556 336 9 367 916 402 938 1.85e-89 306
Msa1436590 AT2G22300.3 69.231 78 24 0 71 148 1 78 7.92e-29 125
Msa1436590 AT2G22300.2 35.072 556 336 9 367 916 460 996 3.77e-89 306
Msa1436590 AT2G22300.2 57.778 135 57 0 14 148 2 136 1.62e-44 175
Msa1436590 AT2G22300.1 35.072 556 336 9 367 916 460 996 3.77e-89 306
Msa1436590 AT2G22300.1 57.778 135 57 0 14 148 2 136 1.62e-44 175
Msa1436590 AT5G09410.4 30.556 612 388 9 314 897 233 835 3.46e-80 279
Msa1436590 AT5G64220.1 31.046 612 378 11 314 897 403 998 1.09e-79 280
Msa1436590 AT5G64220.1 48.370 184 77 2 25 193 13 193 2.51e-44 174
Msa1436590 AT5G64220.2 31.046 612 378 11 314 897 403 998 1.09e-79 280
Msa1436590 AT5G64220.2 48.370 184 77 2 25 193 13 193 2.51e-44 174
Msa1436590 AT5G09410.2 30.556 612 388 9 314 897 354 956 1.76e-79 279
Msa1436590 AT5G09410.2 50.000 168 73 2 25 181 16 183 2.07e-40 162
Msa1436590 AT1G67310.1 33.059 608 345 16 350 919 415 998 1.95e-71 256
Msa1436590 AT1G67310.1 47.287 129 68 0 21 149 32 160 3.50e-36 148

Find 250 sgRNAs with CRISPR-Local

Find 639 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCCTCTGTTTGTAACTTTA+AGG -0.008543 tig0027944:-50422 None:intergenic
TAACATCTACGAACAAAATT+TGG 0.072421 tig0027944:-43299 None:intergenic
CATCCATTTGTGTGCAATTT+TGG 0.104350 tig0027944:+47084 Msa1436590:CDS
GTCATTGACCAAAGTGTTTA+AGG 0.109944 tig0027944:-45848 None:intergenic
GGAAATAAATGATGTCTTTA+AGG 0.133359 tig0027944:-46891 None:intergenic
CTAGATTTCCGGGATAAATT+TGG 0.178425 tig0027944:+47151 Msa1436590:CDS
TTACTACCTTTGCTTGATTA+AGG 0.188541 tig0027944:-51087 None:intergenic
ATCTCTAATGTTTGTTGTTA+TGG 0.193758 tig0027944:+51640 Msa1436590:three_prime_UTR
CAGGCTTATCGCTAGATTTC+CGG 0.196850 tig0027944:+47140 Msa1436590:CDS
ATACAATGCAGGCTGCTTTC+AGG 0.201311 tig0027944:+50783 Msa1436590:intron
GCATCTTTAGCTTGCGAAAA+TGG 0.246405 tig0027944:-46959 None:intergenic
AAAAGCTAAAAGCAGGAAAA+TGG 0.263388 tig0027944:+51674 Msa1436590:three_prime_UTR
GTAAGGTTCTCGGAATTTAC+TGG 0.269930 tig0027944:-50307 None:intergenic
CTTGAATCTTGATAGCTTGA+TGG 0.274270 tig0027944:-50609 None:intergenic
CCAAAGATAGTAGTAGTATA+TGG 0.285002 tig0027944:+51441 Msa1436590:three_prime_UTR
TTGTGTCTTCAGGGAGAAAA+TGG 0.285192 tig0027944:+50072 Msa1436590:intron
GCATGATCCAGTAGCTTCTA+TGG 0.288531 tig0027944:+46736 Msa1436590:CDS
AATCTCTACTTGAGCTTTGA+TGG 0.290115 tig0027944:+46662 Msa1436590:CDS
AGGATGGGGTCTACCGTTGC+TGG 0.297900 tig0027944:+46612 Msa1436590:CDS
TGTAGTAGAGTTTGAATTTA+CGG 0.298703 tig0027944:-44742 None:intergenic
GCTCGTGAAGCCTCAGTTCA+TGG 0.300887 tig0027944:-45298 None:intergenic
TCAGTTGATGATTCTGCTCT+TGG 0.301849 tig0027944:+45934 Msa1436590:CDS
TATTCTGTTTATTGAACTTT+GGG 0.313965 tig0027944:-51412 None:intergenic
CACAGTTGGACCTCGAAAAC+TGG 0.322732 tig0027944:+51493 Msa1436590:three_prime_UTR
GTAAGATTAAATACTTGTTC+TGG 0.324933 tig0027944:-46024 None:intergenic
CACACATTAGATTGGACTTT+GGG 0.329782 tig0027944:-46553 None:intergenic
CTATTCTGTTTATTGAACTT+TGG 0.336960 tig0027944:-51413 None:intergenic
TACTACCTTTGCTTGATTAA+GGG 0.341554 tig0027944:-51086 None:intergenic
TTTGAATTTACGGGAGTGAT+TGG 0.343053 tig0027944:-44732 None:intergenic
AGAAAGCGCAAGAAGATTAT+AGG 0.344611 tig0027944:+51050 Msa1436590:CDS
GTTGCAACTTTGCTGTCAGC+TGG 0.345081 tig0027944:+50094 Msa1436590:CDS
ACTTCTCTCGACACGTTCTT+CGG 0.345176 tig0027944:-50996 None:intergenic
CCTCGATGTTGCGAGCATTA+TGG 0.346860 tig0027944:+42519 Msa1436590:CDS
AAAGTAACAACTTGGCTGAT+AGG 0.349913 tig0027944:-46692 None:intergenic
AAGGGGAATCAGACATGATT+TGG 0.351252 tig0027944:-45909 None:intergenic
AACATCTACGAACAAAATTT+GGG 0.354515 tig0027944:-43298 None:intergenic
CATCATTTATTTCCAATACT+TGG 0.356488 tig0027944:+46900 Msa1436590:CDS
GTTTGTTGTTATGGTACATT+TGG 0.357374 tig0027944:+51649 Msa1436590:three_prime_UTR
CTTCTTTAATATCCTTTCAT+TGG 0.358819 tig0027944:+51368 Msa1436590:three_prime_UTR
AACCTCTGAAGATTATAATC+AGG 0.360208 tig0027944:-41898 None:intergenic
CTGTCAGAAGAAATAGATTC+AGG 0.364565 tig0027944:+44792 Msa1436590:CDS
TTGGATGGACGGCTCTTCAT+TGG 0.365957 tig0027944:+47170 Msa1436590:CDS
CACAGACCTCTTGTGTTTCA+CGG 0.368339 tig0027944:-43485 None:intergenic
CAAGCTAAAGATGCCCTGTT+TGG 0.370069 tig0027944:+46968 Msa1436590:CDS
AACAATATCGTAAAATCATT+TGG 0.371099 tig0027944:+50822 Msa1436590:CDS
CTTCATTGGGCAGCATATTA+CGG 0.371986 tig0027944:+47184 Msa1436590:CDS
CTGGGTACCACCGCATTCTC+CGG 0.372817 tig0027944:+46631 Msa1436590:CDS
GTAGTAGAGTTTGAATTTAC+GGG 0.373399 tig0027944:-44741 None:intergenic
AGGCTTATCGCTAGATTTCC+GGG 0.376462 tig0027944:+47141 Msa1436590:CDS
GCTTAATACCGAGGAAGAAT+CGG 0.378006 tig0027944:+50913 Msa1436590:CDS
ATTCATTGGCTTGACATTGA+TGG 0.378984 tig0027944:-42611 None:intergenic
GAACAAGGACGATGTGTTCC+AGG 0.379575 tig0027944:-43458 None:intergenic
AACTTACCGGGTCAACTTGT+TGG 0.380648 tig0027944:+41942 Msa1436590:CDS
CCATATACTACTACTATCTT+TGG 0.381257 tig0027944:-51441 None:intergenic
GATGATGGCAAATAACTTAC+CGG 0.382750 tig0027944:+41929 Msa1436590:CDS
TTAGAAAAGATGGGCACAAC+TGG 0.386039 tig0027944:+43055 Msa1436590:CDS
AATTTCTGCAGATGCATTGT+TGG 0.386177 tig0027944:-45677 None:intergenic
TTCCTTTGTGCAGCTGGAAC+GGG 0.387086 tig0027944:+51190 Msa1436590:intron
TCTGCTCTGTTCGGATTGAT+TGG 0.387618 tig0027944:-41745 None:intergenic
CATTAAGTATTGCCAAGTAT+TGG 0.389662 tig0027944:-46912 None:intergenic
ACGAGCTTAATACACTTGAA+TGG 0.394137 tig0027944:+45315 Msa1436590:CDS
GTTGGATCCGTGACCAAGTT+TGG 0.394480 tig0027944:-50124 None:intergenic
AAGATACACTGGCAGCTTAC+CGG 0.401008 tig0027944:+50350 Msa1436590:CDS
CTGCTGCATCGGCAGCTGTC+CGG 0.405371 tig0027944:-50369 None:intergenic
TGGCTTAGCAGCTTATCTTT+CGG 0.408505 tig0027944:+50204 Msa1436590:CDS
CTTCGGAACTTTAGAAAAGA+TGG 0.410510 tig0027944:+43045 Msa1436590:CDS
TATTGCTCACTGCAATTGGC+TGG 0.411882 tig0027944:-45720 None:intergenic
TTCAATGACATGAGCTTAGC+TGG 0.412581 tig0027944:+50247 Msa1436590:CDS
CAAAGATAGTAGTAGTATAT+GGG 0.415662 tig0027944:+51442 Msa1436590:three_prime_UTR
TGTTCCTGCAGAAATTGTTC+AGG 0.416056 tig0027944:+46592 Msa1436590:CDS
TTGCAAAGTCAGGACAGCTT+TGG 0.419514 tig0027944:+45874 Msa1436590:CDS
AAAGCTAAAAGCAGGAAAAT+GGG 0.422038 tig0027944:+51675 Msa1436590:three_prime_UTR
TTCTCTTCCATAGAAGCTAC+TGG 0.423128 tig0027944:-46743 None:intergenic
CTATGGAAGAGAAGAACAAC+TGG 0.423755 tig0027944:+46753 Msa1436590:CDS
GATAAGACAAAGACAATAGA+AGG 0.424496 tig0027944:+41646 None:intergenic
ATTCCAAAATTGCACACAAA+TGG 0.426542 tig0027944:-47087 None:intergenic
CGTAAAATCATTTGGTCAGT+TGG 0.427825 tig0027944:+50830 Msa1436590:CDS
CGAGCTTAATACACTTGAAT+GGG 0.429815 tig0027944:+45316 Msa1436590:CDS
AAGCATGGCATGAATCTCAT+TGG 0.433333 tig0027944:-42569 None:intergenic
GGGACCAAAACTGCATATGC+TGG 0.433437 tig0027944:+44813 Msa1436590:CDS
GTTAATTATTTAAGATATGC+TGG 0.434933 tig0027944:-51576 None:intergenic
GCTACTGGATCATGCAAAAC+AGG 0.435079 tig0027944:-46728 None:intergenic
CGCTGATCTTGCTTATACGA+GGG 0.436160 tig0027944:+50174 Msa1436590:CDS
TCCACTACCAGAGATGAATA+TGG 0.438348 tig0027944:-45982 None:intergenic
CAACTTGGCTGATAGGGTTA+TGG 0.443521 tig0027944:-46685 None:intergenic
ACACACATTAGATTGGACTT+TGG 0.444268 tig0027944:-46554 None:intergenic
TGGCTCATGATACAGTTTCA+GGG 0.447890 tig0027944:+44705 Msa1436590:intron
CTGCTCCTCGGTAAGGTTCT+CGG 0.448811 tig0027944:-50317 None:intergenic
ATACTATTGCTCACTGCAAT+TGG 0.451657 tig0027944:-45724 None:intergenic
GCGTTGGCGTTTAAAGAGAA+AGG 0.452827 tig0027944:+50874 Msa1436590:CDS
TCTCTATTTCCTTGCACAGT+TGG 0.459324 tig0027944:+51479 Msa1436590:three_prime_UTR
AAGTAACAACTTGGCTGATA+GGG 0.459430 tig0027944:-46691 None:intergenic
TGTTTGACCGCAAGATGCTT+CGG 0.463262 tig0027944:+43028 Msa1436590:CDS
CTTGTTGGATCAGAGATACA+TGG 0.467564 tig0027944:+41957 Msa1436590:CDS
ACCACATACACACATTAGAT+TGG 0.467840 tig0027944:-46561 None:intergenic
CTTAATACCGAGGAAGAATC+GGG 0.468527 tig0027944:+50914 Msa1436590:CDS
AGAGAAGGGTCTGCTCTGTT+CGG 0.470517 tig0027944:-41754 None:intergenic
AATATCCTTTCATTGGCGAT+TGG 0.471441 tig0027944:+51375 Msa1436590:three_prime_UTR
AACTTTGGGACGGCATATAG+AGG 0.471798 tig0027944:-51398 None:intergenic
CTTCAGACAATTAGCAATCA+AGG 0.472262 tig0027944:+45775 Msa1436590:CDS
ATTAAATACTTGTTCTGGAA+GGG 0.472785 tig0027944:-46019 None:intergenic
TTGCAACTTTGCTGTCAGCT+GGG 0.472793 tig0027944:+50095 Msa1436590:CDS
ATGCAGAGGAGGAATTCTTT+CGG 0.473903 tig0027944:+50957 Msa1436590:CDS
CTGCAGAAATTGTTCAGGAT+GGG 0.477098 tig0027944:+46597 Msa1436590:CDS
TGGATGGACGGCTCTTCATT+GGG 0.477645 tig0027944:+47171 Msa1436590:CDS
AGCTGGGGCAAAGCCAAACT+TGG 0.480001 tig0027944:+50111 Msa1436590:CDS
GACAGAATCCATGGTGCAGA+TGG 0.481590 tig0027944:-44774 None:intergenic
TGGAAATATCAGTGGCTCAC+TGG 0.481619 tig0027944:+50267 Msa1436590:CDS
TAATGAACCATATTCATCTC+TGG 0.490693 tig0027944:+45975 Msa1436590:CDS
CTGATCTCCCGATTCTTCCT+CGG 0.494626 tig0027944:-50921 None:intergenic
TACTGATGTGTCCCCTGCGT+GGG 0.495048 tig0027944:+46044 Msa1436590:CDS
GTCAGGACAGCTTTGGAATG+TGG 0.495726 tig0027944:+45881 Msa1436590:CDS
CACGCATACAAGAAGCATAT+AGG 0.496664 tig0027944:+50392 Msa1436590:CDS
TGGGTACCACCGCATTCTCC+GGG 0.502761 tig0027944:+46632 Msa1436590:CDS
CAATGAAAGGATATTAAAGA+AGG 0.503209 tig0027944:-51367 None:intergenic
ATTCCTTTGTGCAGCTGGAA+CGG 0.503915 tig0027944:+51189 Msa1436590:intron
TGTTGATTCCTTAAACACTT+TGG 0.504390 tig0027944:+45840 Msa1436590:CDS
AGAGGTTTATGCGATGATGA+TGG 0.505647 tig0027944:+41914 Msa1436590:exon
TACAACATAGATTCCGTACA+TGG 0.506906 tig0027944:+50557 Msa1436590:CDS
ACATGATTAGATTATAGAGA+AGG 0.509456 tig0027944:-41769 None:intergenic
CTTTGTCTCAAAATTGCGGA+AGG 0.510652 tig0027944:-50509 None:intergenic
CATAGAGCTGCTCCTCGGTA+AGG 0.512844 tig0027944:-50324 None:intergenic
GCTTATACGAGGGGTTATCA+TGG 0.514631 tig0027944:+50184 Msa1436590:CDS
CTTCTTGCGCTTTCTTAGAA+CGG 0.515603 tig0027944:-51042 None:intergenic
AGATGAATATGGTTCATTAA+CGG 0.515829 tig0027944:-45971 None:intergenic
CCGGGATAAATTTGGATGGA+CGG 0.516036 tig0027944:+47159 Msa1436590:CDS
AGCATGGCATGAATCTCATT+GGG 0.516702 tig0027944:-42568 None:intergenic
CATGATTAGATTATAGAGAA+GGG 0.516937 tig0027944:-41768 None:intergenic
CAATGACAGATTGCAAAGTC+AGG 0.517201 tig0027944:+45864 Msa1436590:CDS
ACCATATTCATCTCTGGTAG+TGG 0.517334 tig0027944:+45981 Msa1436590:CDS
GATTAAATACTTGTTCTGGA+AGG 0.517408 tig0027944:-46020 None:intergenic
CTTTCTTTGTCTCAAAATTG+CGG 0.517560 tig0027944:-50513 None:intergenic
GAAAGGGCTTCCGTGGGCTC+CGG 0.517612 tig0027944:+50891 Msa1436590:CDS
ATCCAACTCACCAAAACCCT+GGG 0.517945 tig0027944:+50140 Msa1436590:CDS
ACGAGTTTCAACTTCAAATG+AGG 0.518692 tig0027944:+46777 Msa1436590:CDS
ATCAGGTTGGTAATGAAGAA+AGG 0.520019 tig0027944:+43243 Msa1436590:intron
GAGAAGTGTAATACGAGTGC+AGG 0.521544 tig0027944:+51012 Msa1436590:CDS
CCTGCAGAAATTGTTCAGGA+TGG 0.524642 tig0027944:+46596 Msa1436590:CDS
CATGGATTCCACACATTGCA+AGG 0.525083 tig0027944:+41975 Msa1436590:CDS
TTGTATGCGTGCTGCTGCAT+CGG 0.525543 tig0027944:-50380 None:intergenic
AGATTATAGGAGGATGAAGT+TGG 0.526731 tig0027944:+51063 Msa1436590:CDS
TGCAACTTTGCTGTCAGCTG+GGG 0.527062 tig0027944:+50096 Msa1436590:CDS
CGTTGGCGTTTAAAGAGAAA+GGG 0.527109 tig0027944:+50875 Msa1436590:CDS
TGCAGAAATTGTTCAGGATG+GGG 0.527605 tig0027944:+46598 Msa1436590:CDS
GGACCAAAACTGCATATGCT+GGG 0.528427 tig0027944:+44814 Msa1436590:CDS
CCGCTGATCTTGCTTATACG+AGG 0.533890 tig0027944:+50173 Msa1436590:CDS
AAGTAGAGATTCACAAATCC+CGG 0.535140 tig0027944:-46650 None:intergenic
ACCTCTGAAGATTATAATCA+GGG 0.539021 tig0027944:-41897 None:intergenic
TCAGGACAGCTTTGGAATGT+GGG 0.540299 tig0027944:+45882 Msa1436590:CDS
ATTTCTTCTGACAGAATCCA+TGG 0.540689 tig0027944:-44783 None:intergenic
AGTATCACTTAGCAGACTAA+AGG 0.541579 tig0027944:+46853 Msa1436590:CDS
GGATGGGGTCTACCGTTGCT+GGG 0.542829 tig0027944:+46613 Msa1436590:CDS
AATCATTTGGTCAGTTGGCG+TGG 0.546844 tig0027944:+50835 Msa1436590:CDS
CTCTACGAATCTTCCATGTA+CGG 0.546988 tig0027944:-50570 None:intergenic
GAGGAGGAATTCTTTCGGAC+TGG 0.547668 tig0027944:+50962 Msa1436590:CDS
TGTCAGAAGAAATAGATTCA+GGG 0.548424 tig0027944:+44793 Msa1436590:CDS
ATTGGGCAGCATATTACGGC+AGG 0.549580 tig0027944:+47188 Msa1436590:CDS
TTTCGAGGTCCAACTGTGCA+AGG 0.550268 tig0027944:-51488 None:intergenic
TTAAAGAGAAAGGGCTTCCG+TGG 0.557276 tig0027944:+50884 Msa1436590:CDS
GACCATGTGCATAATATACA+TGG 0.559880 tig0027944:-43268 None:intergenic
ATTCTTCCTCGGTATTAAGC+CGG 0.562168 tig0027944:-50910 None:intergenic
CTGTTTATTGAACTTTGGGA+CGG 0.563442 tig0027944:-51408 None:intergenic
CCATCCTGAACAATTTCTGC+AGG 0.563606 tig0027944:-46596 None:intergenic
TCAACACCACTTGAAGAGAC+AGG 0.563737 tig0027944:-45823 None:intergenic
ATACTTGTGATTACAAAGCA+TGG 0.565098 tig0027944:-42584 None:intergenic
ATTTCCGGGATAAATTTGGA+TGG 0.565666 tig0027944:+47155 Msa1436590:CDS
AAGACAATAGAAGGACAGAA+AGG 0.565998 tig0027944:+41655 Msa1436590:five_prime_UTR
AACACCTCTGCTGTGCCTAA+CGG 0.566570 tig0027944:+45365 Msa1436590:CDS
AGGAATTCTTTCGGACTGGT+AGG 0.566668 tig0027944:+50966 Msa1436590:CDS
AAGCTAAAAGCAGGAAAATG+GGG 0.568330 tig0027944:+51676 Msa1436590:three_prime_UTR
ATTGCTCACTGCAATTGGCT+GGG 0.569273 tig0027944:-45719 None:intergenic
GAATCAGCAAAGTGATGCAG+AGG 0.570072 tig0027944:+50943 Msa1436590:CDS
TCAGCAAAGTGATGCAGAGG+AGG 0.570168 tig0027944:+50946 Msa1436590:CDS
GCAGAATCATCAACTGAACA+AGG 0.575288 tig0027944:-45928 None:intergenic
GATCCAACTCACCAAAACCC+TGG 0.576628 tig0027944:+50139 Msa1436590:CDS
TTCGTGCAGATCCTAGTGAC+TGG 0.577891 tig0027944:+46503 Msa1436590:intron
TATGAAAGAGTCCAGTCACT+AGG 0.581151 tig0027944:-46514 None:intergenic
AGAGGCCAATCGCCAATGAA+AGG 0.581872 tig0027944:-51380 None:intergenic
CTGTGGAAGACACCCACGCA+GGG 0.582346 tig0027944:-46056 None:intergenic
TTCGGAACTTTAGAAAAGAT+GGG 0.582890 tig0027944:+43046 Msa1436590:CDS
AACCATCCTGTCTCTTCAAG+TGG 0.583378 tig0027944:+45817 Msa1436590:CDS
TTAGCAGACTAAAGGAGGCA+AGG 0.584150 tig0027944:+46861 Msa1436590:CDS
AGCAGAATGTGAAGGCAGGT+TGG 0.584497 tig0027944:+51310 Msa1436590:three_prime_UTR
CCGTCCATCCAAATTTATCC+CGG 0.585048 tig0027944:-47159 None:intergenic
TAGCAGACTAAAGGAGGCAA+GGG 0.588948 tig0027944:+46862 Msa1436590:CDS
TTCCTTAAAGTTACAAACAG+AGG 0.589046 tig0027944:+50420 Msa1436590:CDS
AATGAAAGGATATTAAAGAA+GGG 0.590145 tig0027944:-51366 None:intergenic
TTGAGAAAGCAGTGTTGCGT+TGG 0.592228 tig0027944:+50858 Msa1436590:CDS
ACATTAGATTGGACTTTGGG+AGG 0.592424 tig0027944:-46550 None:intergenic
AATCACCATTTACCTCCGTT+AGG 0.593445 tig0027944:-45380 None:intergenic
ACCCTGATTATAATCTTCAG+AGG 0.596070 tig0027944:+41896 Msa1436590:five_prime_UTR
AAGCGCAAGAAGATTATAGG+AGG 0.598107 tig0027944:+51053 Msa1436590:CDS
GTGTTTCACGGTAATGAACA+AGG 0.598368 tig0027944:-43473 None:intergenic
ACTCAGCAGAATGTGAAGGC+AGG 0.600061 tig0027944:+51306 Msa1436590:three_prime_UTR
ATCACTTAGCAGACTAAAGG+AGG 0.601189 tig0027944:+46856 Msa1436590:CDS
CCATGGTGCAGATGGGTCAG+AGG 0.602933 tig0027944:-44766 None:intergenic
TTTCAATGCAATTCCAAACA+GGG 0.604567 tig0027944:-46981 None:intergenic
GACCAAAACTGCATATGCTG+GGG 0.606069 tig0027944:+44815 Msa1436590:CDS
GATACTCAAAAGTAACAACT+TGG 0.606670 tig0027944:-46700 None:intergenic
ACAGAATCCATGGTGCAGAT+GGG 0.607338 tig0027944:-44773 None:intergenic
TCCAATCTAATGTGTGTATG+TGG 0.609379 tig0027944:+46560 Msa1436590:CDS
TTCACAAATCCCGGAGAATG+CGG 0.610070 tig0027944:-46641 None:intergenic
GCTGATCTTGCTTATACGAG+GGG 0.612221 tig0027944:+50175 Msa1436590:CDS
GGCAAAGCCAAACTTGGTCA+CGG 0.614024 tig0027944:+50117 Msa1436590:CDS
AACTGGAGCTTTAAGCACCC+TGG 0.616292 tig0027944:+51510 Msa1436590:three_prime_UTR
AAAGATAGTAGTAGTATATG+GGG 0.616346 tig0027944:+51443 Msa1436590:three_prime_UTR
CCTCTGACCCATCTGCACCA+TGG 0.617433 tig0027944:+44766 Msa1436590:CDS
TAAAGTTCCGAAGCATCTTG+CGG 0.620816 tig0027944:-43035 None:intergenic
AGCTTAGCTGGAAATATCAG+TGG 0.624080 tig0027944:+50259 Msa1436590:CDS
TCATTACCGTGAAACACAAG+AGG 0.627907 tig0027944:+43479 Msa1436590:CDS
GAAGCTTACCTTGCAATGTG+TGG 0.628537 tig0027944:-41983 None:intergenic
AGAATCATCAACTGAACAAG+GGG 0.629791 tig0027944:-45926 None:intergenic
GCTCTATGTGAAAGATACAC+TGG 0.629798 tig0027944:+50339 Msa1436590:CDS
AAGTTGACATGAAAATGAAG+AGG 0.630398 tig0027944:+51237 Msa1436590:CDS
TGGAGGAAGCAAGAACGAGA+TGG 0.631278 tig0027944:+42539 Msa1436590:CDS
TTACTGATGTGTCCCCTGCG+TGG 0.631639 tig0027944:+46043 Msa1436590:CDS
ATAGTAGTAGTATATGGGGA+TGG 0.632478 tig0027944:+51447 Msa1436590:three_prime_UTR
GTCTTCCACAGAGAAATCAA+AGG 0.632840 tig0027944:+46068 Msa1436590:CDS
TAAAGAGAAAGGGCTTCCGT+GGG 0.635069 tig0027944:+50885 Msa1436590:CDS
ACCTCCGTTAGGCACAGCAG+AGG 0.636051 tig0027944:-45369 None:intergenic
CGATGTTGCGAGCATTATGG+AGG 0.637890 tig0027944:+42522 Msa1436590:CDS
AATGCGGTGGTACCCAGCAA+CGG 0.638258 tig0027944:-46625 None:intergenic
ATCCATGTATATTATGCACA+TGG 0.639136 tig0027944:+43266 Msa1436590:CDS
CAGAATCATCAACTGAACAA+GGG 0.639781 tig0027944:-45927 None:intergenic
GTTGGCCCTTAATCAAGCAA+AGG 0.646848 tig0027944:+51081 Msa1436590:CDS
TGGCTCACTGGAAACTAGCA+CGG 0.646998 tig0027944:+50279 Msa1436590:CDS
TAAGATCGTTTGCTACGACT+AGG 0.647975 tig0027944:-45343 None:intergenic
TTTCACATAGAGCTGCTCCT+CGG 0.648879 tig0027944:-50329 None:intergenic
AGCTAAAAGCAGGAAAATGG+GGG 0.651006 tig0027944:+51677 Msa1436590:three_prime_UTR
TCTGTGGAAGACACCCACGC+AGG 0.652477 tig0027944:-46057 None:intergenic
ATGATGGCAAATAACTTACC+GGG 0.653975 tig0027944:+41930 Msa1436590:CDS
GGAAACCTTTGATTTCTCTG+TGG 0.654481 tig0027944:-46073 None:intergenic
TTCATTAACGGATGAAACTG+AGG 0.656620 tig0027944:-45959 None:intergenic
GCACACTCAGCAGAATGTGA+AGG 0.657495 tig0027944:+51302 Msa1436590:three_prime_UTR
ACTACTGAATATGATGCGCA+AGG 0.659271 tig0027944:+47052 Msa1436590:CDS
CACCACTTGAAGAGACAGGA+TGG 0.667219 tig0027944:-45819 None:intergenic
TCTGATCCAACAAGTTGACC+CGG 0.667535 tig0027944:-41948 None:intergenic
AAGGATATCGAAATGAGCAG+AGG 0.668623 tig0027944:+45794 Msa1436590:CDS
ACCTCTGCTGTGCCTAACGG+AGG 0.674338 tig0027944:+45368 Msa1436590:CDS
CAGTCAAAAGCCATGAACTG+AGG 0.675587 tig0027944:+45288 Msa1436590:CDS
ACAAATCCCGGAGAATGCGG+TGG 0.677994 tig0027944:-46638 None:intergenic
ACCAAAACTGCATATGCTGG+GGG 0.678637 tig0027944:+44816 Msa1436590:CDS
TGGGCTCCGGCTTAATACCG+AGG 0.693204 tig0027944:+50904 Msa1436590:CDS
TGTGGAAGACACCCACGCAG+GGG 0.697131 tig0027944:-46055 None:intergenic
TATGGAAGAGAAGAACAACT+GGG 0.717360 tig0027944:+46754 Msa1436590:CDS
CCATAATGCTCGCAACATCG+AGG 0.721796 tig0027944:-42519 None:intergenic
TCCAACTCACCAAAACCCTG+GGG 0.739177 tig0027944:+50141 Msa1436590:CDS
CCTCGTATAAGCAAGATCAG+CGG 0.742504 tig0027944:-50173 None:intergenic
CCAACTCACCAAAACCCTGG+GGG 0.742962 tig0027944:+50142 Msa1436590:CDS
AAATTCCGAGAACCTTACCG+AGG 0.753280 tig0027944:+50312 Msa1436590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTAATTTTTTTTA+GGG + tig0027944:42271-42290 Msa1436590:intron 0.0%
!!! AAATTTTAATATATTATATA+TGG - tig0027944:48581-48600 None:intergenic 0.0%
!! AGAAAATTAAATTAAAGTAT+TGG + tig0027944:42314-42333 Msa1436590:intron 10.0%
!! TAAAATAAAAAATTCAAAAC+AGG - tig0027944:42488-42507 None:intergenic 10.0%
!! ATTCAAAATTATAATAACTA+TGG - tig0027944:45446-45465 None:intergenic 10.0%
!! AATAAAATTTAAATTCTTTC+CGG + tig0027944:47356-47375 Msa1436590:intron 10.0%
!! TATATAATATAAAAACCATT+CGG + tig0027944:47482-47501 Msa1436590:intron 10.0%
!!! GTTATTTTTTATAATAAAAG+TGG - tig0027944:47832-47851 None:intergenic 10.0%
!!! CTGTTTTTTTTTTAAAAATA+AGG - tig0027944:48076-48095 None:intergenic 10.0%
!!! TTTTAAATAAGTTGTTTTTT+TGG + tig0027944:49300-49319 Msa1436590:intron 10.0%
!!! GAACTTTTTTTTTTTTTTTA+AGG - tig0027944:49355-49374 None:intergenic 10.0%
!!! TTTTGATCCTTTTTTTTTTT+TGG + tig0027944:41864-41883 Msa1436590:intron 15.0%
!! ATATACATTAAAATTGAAAC+TGG - tig0027944:42038-42057 None:intergenic 15.0%
!! TTTCCATATGATTTAATTAT+TGG - tig0027944:42239-42258 None:intergenic 15.0%
!! TAAATTTATAGTATTCAACA+TGG + tig0027944:42359-42378 Msa1436590:intron 15.0%
!!! AAATCCATTGTTTTTAATAT+TGG + tig0027944:42398-42417 Msa1436590:intron 15.0%
!! CAAAAATATAGTTAAGTTAA+CGG - tig0027944:43353-43372 None:intergenic 15.0%
!!! TATAATTCTTTTATCTTTTC+AGG + tig0027944:43433-43452 Msa1436590:intron 15.0%
!!! TTTTATGTTTATAGAGAAAA+CGG - tig0027944:44501-44520 None:intergenic 15.0%
!!! ATAAACATAAAACATACTTT+TGG + tig0027944:44509-44528 Msa1436590:intron 15.0%
!!! AAATATAAGAGTTTCTTTTT+TGG + tig0027944:45092-45111 Msa1436590:intron 15.0%
!!! TTTTTTTTTTTTCCATTTTC+TGG + tig0027944:45595-45614 Msa1436590:intron 15.0%
!!! TAAATTTTATTAGACAAACA+TGG - tig0027944:47347-47366 None:intergenic 15.0%
!!! AAAAAATATTTGTTTTGGTT+CGG - tig0027944:47794-47813 None:intergenic 15.0%
!!! TGGATAAAAAATATTTGTTT+TGG - tig0027944:47799-47818 None:intergenic 15.0%
!!! ATAAGCTGTTTTTTAAAATA+AGG - tig0027944:48027-48046 None:intergenic 15.0%
!!! AATAAGCTGTTTTTAAAATA+AGG + tig0027944:49242-49261 Msa1436590:intron 15.0%
!! AAAAAAAAAAAAAGTTCAAG+TGG + tig0027944:49358-49377 Msa1436590:intron 15.0%
!! AAGAACTGTTAATAAATTAA+CGG + tig0027944:49434-49453 Msa1436590:intron 15.0%
!!! TTAATTTGATTATTATTCCT+AGG + tig0027944:51119-51138 Msa1436590:intron 15.0%
!!! TTAAAAATGTTGTTATTGTT+AGG + tig0027944:51277-51296 Msa1436590:three_prime_UTR 15.0%
!! AACATGATGAAATATGAAAA+GGG - tig0027944:41834-41853 None:intergenic 20.0%
!! AAACATGATGAAATATGAAA+AGG - tig0027944:41835-41854 None:intergenic 20.0%
!! TGATTTAATTATTGGATCAA+GGG - tig0027944:42231-42250 None:intergenic 20.0%
!! ATGATTTAATTATTGGATCA+AGG - tig0027944:42232-42251 None:intergenic 20.0%
!! GATCCAATAATTAAATCATA+TGG + tig0027944:42233-42252 Msa1436590:intron 20.0%
!!! AATTAAAGTATTGGAATATG+AGG + tig0027944:42323-42342 Msa1436590:intron 20.0%
!! GAATCCAATATTAAAAACAA+TGG - tig0027944:42405-42424 None:intergenic 20.0%
!!! TACTTTTTTTGTGTATAAAC+AGG + tig0027944:42991-43010 Msa1436590:intron 20.0%
!!! ATTTGTGTTATTGTTACTAT+TGG + tig0027944:43159-43178 Msa1436590:intron 20.0%
!! ATACAATAATTTGAGAAGTA+CGG - tig0027944:43398-43417 None:intergenic 20.0%
!! TCTCAAATTATTGTATCTAT+TGG + tig0027944:43402-43421 Msa1436590:intron 20.0%
!!! AAAATTCAGGTTTTTGATAA+TGG - tig0027944:44306-44325 None:intergenic 20.0%
!! TCTTGCTACAATATTAAAAA+AGG + tig0027944:44374-44393 Msa1436590:intron 20.0%
!! TTTACATCTGATTATAACTA+TGG - tig0027944:44604-44623 None:intergenic 20.0%
!!! CACTTTTTTTCATATAATCA+AGG - tig0027944:45157-45176 None:intergenic 20.0%
!!! TGATTTTGTTGATCAAAATA+GGG - tig0027944:45490-45509 None:intergenic 20.0%
!!! TTGATTTTGTTGATCAAAAT+AGG - tig0027944:45491-45510 None:intergenic 20.0%
!!! CAATTTTCTCAAATTATTAC+CGG - tig0027944:46303-46322 None:intergenic 20.0%
!! AGTGATAATTGTAAAATAAC+AGG - tig0027944:46462-46481 None:intergenic 20.0%
!!! CTTTCAGAAAAAATTGTTTT+AGG + tig0027944:47022-47041 Msa1436590:CDS 20.0%
!!! AACATTTTATTAGAAGAAAG+AGG - tig0027944:47382-47401 None:intergenic 20.0%
!!! AAATGTTAACTTTTAATCCA+AGG + tig0027944:47395-47414 Msa1436590:intron 20.0%
!!! TTAGTCCTTTTAAGTTATTT+TGG + tig0027944:47549-47568 Msa1436590:intron 20.0%
!! GTTATAAACCTCATATTTAA+AGG - tig0027944:47587-47606 None:intergenic 20.0%
!! ATATGAGGTTTATAACAAAT+TGG + tig0027944:47591-47610 Msa1436590:intron 20.0%
!!! ATAAAAGTGGTTTTATTCAT+TGG - tig0027944:47819-47838 None:intergenic 20.0%
!! GAAATTCATGATGTTATAAA+AGG - tig0027944:48904-48923 None:intergenic 20.0%
!!! ATGCAAAATAGCTTATTTTT+TGG - tig0027944:48975-48994 None:intergenic 20.0%
!!! TAAATAAGCTGTTTTGAATA+AGG + tig0027944:49074-49093 Msa1436590:intron 20.0%
!! TGACCAAAATAACTTAAATA+GGG - tig0027944:49549-49568 None:intergenic 20.0%
!!! ATTGATCCTTTAAGTTATTT+TGG - tig0027944:49751-49770 None:intergenic 20.0%
!! GTTACAAACATTAAACTTAA+AGG + tig0027944:49773-49792 Msa1436590:intron 20.0%
!! AATGTTTACATTAGAACTAA+TGG - tig0027944:49891-49910 None:intergenic 20.0%
!!! ATTAGTTCTAATGTAAACAT+TGG + tig0027944:49890-49909 Msa1436590:intron 20.0%
!! AGCATGAATTTAAGTAAAAT+AGG + tig0027944:50001-50020 Msa1436590:intron 20.0%
!! GCATGAATTTAAGTAAAATA+GGG + tig0027944:50002-50021 Msa1436590:intron 20.0%
!! AACAATATCGTAAAATCATT+TGG + tig0027944:50822-50841 Msa1436590:CDS 20.0%
!!! AACAACATTTTTAAGAAGTT+CGG - tig0027944:51271-51290 None:intergenic 20.0%
!! AATGAAAGGATATTAAAGAA+GGG - tig0027944:51369-51388 None:intergenic 20.0%
!! TATTCTGTTTATTGAACTTT+GGG - tig0027944:51415-51434 None:intergenic 20.0%
!!! GTTAATTATTTAAGATATGC+TGG - tig0027944:51579-51598 None:intergenic 20.0%
!!! TGTATAAAGACATTTTTACT+TGG + tig0027944:51602-51621 Msa1436590:three_prime_UTR 20.0%
! CATGATTAGATTATAGAGAA+GGG - tig0027944:41771-41790 None:intergenic 25.0%
! ACATGATTAGATTATAGAGA+AGG - tig0027944:41772-41791 None:intergenic 25.0%
! ATTTATAGTATTCAACATGG+TGG + tig0027944:42362-42381 Msa1436590:intron 25.0%
!!! TTACTTTTAGGCAAATTCAT+TGG - tig0027944:42628-42647 None:intergenic 25.0%
!!! AGCAACAGATAATTACTTTT+AGG - tig0027944:42640-42659 None:intergenic 25.0%
! TAATAAGATAGCATTGTCAT+TGG - tig0027944:42964-42983 None:intergenic 25.0%
!!! TTTTTTTGTGTATAAACAGG+TGG + tig0027944:42994-43013 Msa1436590:intron 25.0%
! AACATCTACGAACAAAATTT+GGG - tig0027944:43301-43320 None:intergenic 25.0%
! TAACATCTACGAACAAAATT+TGG - tig0027944:43302-43321 None:intergenic 25.0%
!! ATTTTGTTCGTAGATGTTAT+TGG + tig0027944:43303-43322 Msa1436590:CDS 25.0%
! AATATAGTTAAGTTAACGGT+TGG - tig0027944:43349-43368 None:intergenic 25.0%
!! AAATTATGATTTGTGTTGTG+AGG - tig0027944:43557-43576 None:intergenic 25.0%
!! TACATATATGGTCCTTATTT+CGG - tig0027944:43607-43626 None:intergenic 25.0%
!! TGGAATAACCATTCAATTTT+AGG + tig0027944:43956-43975 Msa1436590:intron 25.0%
! ACTTGAAACCTAAAATTGAA+TGG - tig0027944:43967-43986 None:intergenic 25.0%
! ATATGAATATGTCAAATGAG+AGG + tig0027944:44069-44088 Msa1436590:intron 25.0%
! TATGAATATGTCAAATGAGA+GGG + tig0027944:44070-44089 Msa1436590:intron 25.0%
!! GTTTTATATATAATAGCCTG+TGG - tig0027944:44136-44155 None:intergenic 25.0%
! TTAGCACTTCAAAAAAATTC+AGG - tig0027944:44319-44338 None:intergenic 25.0%
! AACATAATGAAACAATGAGT+GGG - tig0027944:44418-44437 None:intergenic 25.0%
! ATATGAGAATGAACAAAACA+TGG + tig0027944:44660-44679 Msa1436590:intron 25.0%
!!! TTATAACTTTCTTTGACTTG+TGG + tig0027944:44685-44704 Msa1436590:intron 25.0%
! TGTAGTAGAGTTTGAATTTA+CGG - tig0027944:44745-44764 None:intergenic 25.0%
! AGAAACTCTTATATTTCCTT+TGG - tig0027944:45088-45107 None:intergenic 25.0%
!!! GCCTGACTTTTTTAAAAATA+TGG + tig0027944:45183-45202 Msa1436590:intron 25.0%
!!! GCCATATTTTTAAAAAAGTC+AGG - tig0027944:45187-45206 None:intergenic 25.0%
! TAAAAATATGGCAACATAGT+TGG + tig0027944:45195-45214 Msa1436590:intron 25.0%
!! TATTTTCATCCGTTATGTTT+TGG + tig0027944:45237-45256 Msa1436590:intron 25.0%
!! ATTTTGAATTATCGTTTTGC+AGG + tig0027944:45457-45476 Msa1436590:intron 25.0%
! AAAAAGAAAAGAAGAAGCAA+AGG - tig0027944:45580-45599 None:intergenic 25.0%
!! ACACTTTCTGAAAAATTGTA+TGG - tig0027944:45751-45770 None:intergenic 25.0%
! AGATGAATATGGTTCATTAA+CGG - tig0027944:45974-45993 None:intergenic 25.0%
!!! ATTAAATACTTGTTCTGGAA+GGG - tig0027944:46022-46041 None:intergenic 25.0%
! GTAAGATTAAATACTTGTTC+TGG - tig0027944:46027-46046 None:intergenic 25.0%
! TTTACAACATTGGAATTCTA+TGG - tig0027944:46197-46216 None:intergenic 25.0%
! CAATTATCACTAAACTTTCT+AGG + tig0027944:46471-46490 Msa1436590:intron 25.0%
! GGAAATAAATGATGTCTTTA+AGG - tig0027944:46894-46913 None:intergenic 25.0%
! CATCATTTATTTCCAATACT+TGG + tig0027944:46900-46919 Msa1436590:CDS 25.0%
! TGCATTGAAAAACAGATTAA+AGG + tig0027944:46994-47013 Msa1436590:CDS 25.0%
! TGAAAAACAGATTAAAGGAA+TGG + tig0027944:46999-47018 Msa1436590:CDS 25.0%
!!! TGCAATTTTGGAATATACAT+GGG + tig0027944:47096-47115 Msa1436590:CDS 25.0%
!!! ATTACTTTATTTTCATGGTC+AGG + tig0027944:47121-47140 Msa1436590:CDS 25.0%
! TTACATAAACATACGCAATT+AGG - tig0027944:47283-47302 None:intergenic 25.0%
! GTTACAAACTACAAACTTAA+AGG - tig0027944:47526-47545 None:intergenic 25.0%
! TGTGACCAAAATAACTTAAA+AGG - tig0027944:47557-47576 None:intergenic 25.0%
! ACATAAGTCCTTTAAATATG+AGG + tig0027944:47576-47595 Msa1436590:intron 25.0%
!! AAATTGGTCCTTTAAGTTTA+GGG + tig0027944:47607-47626 Msa1436590:intron 25.0%
!!! ATAAGCTGTTTTGAATAAGT+TGG - tig0027944:49110-49129 None:intergenic 25.0%
!!! TAGTATTGGATAGGATTTTA+AGG - tig0027944:48353-48372 None:intergenic 25.0%
!! ATTCCAATCAACTTCATTTT+TGG + tig0027944:48449-48468 Msa1436590:intron 25.0%
! ACACCTTAACAGTTATTTAA+TGG + tig0027944:48601-48620 Msa1436590:intron 25.0%
! CACCTTAACAGTTATTTAAT+GGG + tig0027944:48602-48621 Msa1436590:intron 25.0%
! AACCCATTAAATAACTGTTA+AGG - tig0027944:48607-48626 None:intergenic 25.0%
! AAAAAAAAGTTCAAGTGGTT+TGG + tig0027944:49363-49382 Msa1436590:intron 25.0%
! CTGTTAATAAATTAACGGTT+CGG + tig0027944:49439-49458 Msa1436590:intron 25.0%
! AAAATAACTTAAATAGGGGT+GGG - tig0027944:49544-49563 None:intergenic 25.0%
! GACCAAAATAACTTAAATAG+GGG - tig0027944:49548-49567 None:intergenic 25.0%
! GTGACCAAAATAACTTAAAT+AGG - tig0027944:49550-49569 None:intergenic 25.0%
! GAAAACGTTTACAAACTTAA+AGG - tig0027944:49581-49600 None:intergenic 25.0%
!!! CATAGTTTTGGTTAACAAAA+GGG - tig0027944:49612-49631 None:intergenic 25.0%
!!! TCATAGTTTTGGTTAACAAA+AGG - tig0027944:49613-49632 None:intergenic 25.0%
!! GACAACTTTTACAAACTTAA+AGG + tig0027944:49653-49672 Msa1436590:intron 25.0%
! GTTACAAAACTCAAACTTAA+AGG + tig0027944:49713-49732 Msa1436590:intron 25.0%
! CATGTAAGAAATGTATTCTT+AGG - tig0027944:49916-49935 None:intergenic 25.0%
! CTAAGAATACATTTCTTACA+TGG + tig0027944:49914-49933 Msa1436590:intron 25.0%
! CTAGTTATCTATAAACAGAA+AGG - tig0027944:49956-49975 None:intergenic 25.0%
! AATTCATGCTACATTCATAT+AGG - tig0027944:49991-50010 None:intergenic 25.0%
! ATTTAAGTAAAATAGGGTCA+TGG + tig0027944:50008-50027 Msa1436590:intron 25.0%
! ATTAAAACATTGTGTCTTCA+GGG + tig0027944:50063-50082 Msa1436590:intron 25.0%
! AAAAATATCGGTAATGATGA+AGG - tig0027944:50653-50672 None:intergenic 25.0%
! TGATTATTATTCCTAGGAAT+TGG + tig0027944:51125-51144 Msa1436590:intron 25.0%
! CAATGAAAGGATATTAAAGA+AGG - tig0027944:51370-51389 None:intergenic 25.0%
! CTTCTTTAATATCCTTTCAT+TGG + tig0027944:51368-51387 Msa1436590:three_prime_UTR 25.0%
! CTATTCTGTTTATTGAACTT+TGG - tig0027944:51416-51435 None:intergenic 25.0%
! CAAAGATAGTAGTAGTATAT+GGG + tig0027944:51442-51461 Msa1436590:three_prime_UTR 25.0%
! AAAGATAGTAGTAGTATATG+GGG + tig0027944:51443-51462 Msa1436590:three_prime_UTR 25.0%
!!! ATCTCTAATGTTTGTTGTTA+TGG + tig0027944:51640-51659 Msa1436590:three_prime_UTR 25.0%
ATGATGAAATATGAAAAGGG+TGG - tig0027944:41831-41850 None:intergenic 30.0%
CGCTGTACCAAAAAAAAAAA+AGG - tig0027944:41874-41893 None:intergenic 30.0%
! ACCTCTGAAGATTATAATCA+GGG - tig0027944:41900-41919 None:intergenic 30.0%
! AACCTCTGAAGATTATAATC+AGG - tig0027944:41901-41920 None:intergenic 30.0%
! TTGTTGTTGACAAATCATTG+AGG + tig0027944:42141-42160 Msa1436590:intron 30.0%
TAGGGCATATGAATAGAAAA+CGG + tig0027944:42289-42308 Msa1436590:intron 30.0%
AACAGGTAAATAAGTAGTAC+AGG - tig0027944:42471-42490 None:intergenic 30.0%
ATACTTGTGATTACAAAGCA+TGG - tig0027944:42587-42606 None:intergenic 30.0%
!! TGTTTGTTGTGAAGAAGAAA+TGG + tig0027944:42676-42695 Msa1436590:intron 30.0%
ACAATCTACGAGAAAATGAA+TGG - tig0027944:42722-42741 None:intergenic 30.0%
GCTCTGATTCATAATTATCA+TGG - tig0027944:42834-42853 None:intergenic 30.0%
! TTCGGAACTTTAGAAAAGAT+GGG + tig0027944:43046-43065 Msa1436590:CDS 30.0%
AACTGGAAAAAGAAAAAGGA+TGG + tig0027944:43072-43091 Msa1436590:CDS 30.0%
!! AGTGAGGATTTTCATTTTTG+TGG + tig0027944:43128-43147 Msa1436590:intron 30.0%
!! GTTATTGTTACTATTGGTTC+TGG + tig0027944:43165-43184 Msa1436590:intron 30.0%
! CTTTCTTTTCTCTATCAATC+AGG + tig0027944:43226-43245 Msa1436590:intron 30.0%
ATCCATGTATATTATGCACA+TGG + tig0027944:43266-43285 Msa1436590:CDS 30.0%
! GCGAAATTAAGCTTTTTGTA+AGG - tig0027944:43535-43554 None:intergenic 30.0%
!!! GTATTGTTTTAGCCGAAATA+AGG + tig0027944:43592-43611 Msa1436590:intron 30.0%
! TTTGAAATTCACTGATCCTT+GGG + tig0027944:43643-43662 Msa1436590:intron 30.0%
AAACCTACATTATATACCCA+AGG - tig0027944:43662-43681 None:intergenic 30.0%
!!! ATTTTTTATGGAGTTGATCG+TGG - tig0027944:43711-43730 None:intergenic 30.0%
!!! TGCTGCAAGGAAATTTTTTA+TGG - tig0027944:43723-43742 None:intergenic 30.0%
! AGCAAAAATGTCTTTTCGAT+TGG + tig0027944:43739-43758 Msa1436590:intron 30.0%
TAAGCATCTCAATTTCTCAA+AGG - tig0027944:44096-44115 None:intergenic 30.0%
TTGTTCCTATAAGTTCTTCT+AGG + tig0027944:44179-44198 Msa1436590:intron 30.0%
TGTTCCTATAAGTTCTTCTA+GGG + tig0027944:44180-44199 Msa1436590:intron 30.0%
AATTCCCTAGAAGAACTTAT+AGG - tig0027944:44187-44206 None:intergenic 30.0%
TAATAACCGCAATGAACTAA+TGG - tig0027944:44244-44263 None:intergenic 30.0%
!! TAGCTCTTTTAAAGAAGTGA+AGG + tig0027944:44346-44365 Msa1436590:intron 30.0%
CAACATAATGAAACAATGAG+TGG - tig0027944:44419-44438 None:intergenic 30.0%
GTAGTAGAGTTTGAATTTAC+GGG - tig0027944:44744-44763 None:intergenic 30.0%
TGTCAGAAGAAATAGATTCA+GGG + tig0027944:44793-44812 Msa1436590:CDS 30.0%
TGTGCAATTATCTTACATAG+AGG - tig0027944:45028-45047 None:intergenic 30.0%
TGTCCATTTCCAAAACATAA+CGG - tig0027944:45249-45268 None:intergenic 30.0%
AATCAAGTATCTCCAGAAAA+TGG - tig0027944:45610-45629 None:intergenic 30.0%
!! TGTTGATTCCTTAAACACTT+TGG + tig0027944:45840-45859 Msa1436590:CDS 30.0%
TAATGAACCATATTCATCTC+TGG + tig0027944:45975-45994 Msa1436590:CDS 30.0%
! GATTAAATACTTGTTCTGGA+AGG - tig0027944:46023-46042 None:intergenic 30.0%
ACAAACAAAGGAAAAGGAAA+AGG - tig0027944:46097-46116 None:intergenic 30.0%
AGATACACAAACAAAGGAAA+AGG - tig0027944:46103-46122 None:intergenic 30.0%
CTAAGTAGATACACAAACAA+AGG - tig0027944:46109-46128 None:intergenic 30.0%
! GTTATGACTAGTTGATTTCT+TGG + tig0027944:46152-46171 Msa1436590:intron 30.0%
AATTCCAATGTTGTAAACTG+TGG + tig0027944:46200-46219 Msa1436590:intron 30.0%
TATTCCACAGTTTACAACAT+TGG - tig0027944:46207-46226 None:intergenic 30.0%
TAAGATGTGCATATTCTTCA+CGG - tig0027944:46236-46255 None:intergenic 30.0%
ACAGGTAGTAAGTAAATTGA+AGG - tig0027944:46444-46463 None:intergenic 30.0%
GATACTCAAAAGTAACAACT+TGG - tig0027944:46703-46722 None:intergenic 30.0%
! CATTAAGTATTGCCAAGTAT+TGG - tig0027944:46915-46934 None:intergenic 30.0%
TTTCAATGCAATTCCAAACA+GGG - tig0027944:46984-47003 None:intergenic 30.0%
! TTTTCAATGCAATTCCAAAC+AGG - tig0027944:46985-47004 None:intergenic 30.0%
ATTCCAAAATTGCACACAAA+TGG - tig0027944:47090-47109 None:intergenic 30.0%
!!! GTGCAATTTTGGAATATACA+TGG + tig0027944:47095-47114 Msa1436590:CDS 30.0%
!!! GGGCAATTACTTTATTTTCA+TGG + tig0027944:47116-47135 Msa1436590:CDS 30.0%
AACTAACATGTTTGAACAAG+CGG - tig0027944:47231-47250 None:intergenic 30.0%
GCGTATGTTTATGTAATAGT+AGG + tig0027944:47287-47306 Msa1436590:intron 30.0%
! TTTTATTAGAAGAAAGAGGC+CGG - tig0027944:47378-47397 None:intergenic 30.0%
! CAAATTGGTCCTTTAAGTTT+AGG + tig0027944:47606-47625 Msa1436590:intron 30.0%
! AATTGGTCCTTTAAGTTTAG+GGG + tig0027944:47608-47627 Msa1436590:intron 30.0%
ACCATTTCAAAATTTCGGTT+CGG - tig0027944:47671-47690 None:intergenic 30.0%
!!! ACCGAAATTTTGAAATGGTT+CGG + tig0027944:47672-47691 Msa1436590:intron 30.0%
ATGGTTAATAGGTAAGCAAA+TGG - tig0027944:47765-47784 None:intergenic 30.0%
!!! ATATTTGTTTTGGTTCGGTT+CGG - tig0027944:47789-47808 None:intergenic 30.0%
! GGTGTTTTGCATAAAATAAG+CGG - tig0027944:49095-49114 None:intergenic 30.0%
TAAATAACAGAGGGTAGTAT+TGG - tig0027944:48367-48386 None:intergenic 30.0%
CATCAGTGATAAATAACAGA+GGG - tig0027944:48376-48395 None:intergenic 30.0%
ACATCAGTGATAAATAACAG+AGG - tig0027944:48377-48396 None:intergenic 30.0%
ATTTATCACTGATGTGTACT+AGG + tig0027944:48382-48401 Msa1436590:intron 30.0%
! GATCCAAAAATGAAGTTGAT+TGG - tig0027944:48455-48474 None:intergenic 30.0%
!! ACAGTTATTTAATGGGTTTC+TGG + tig0027944:48609-48628 Msa1436590:intron 30.0%
TATCTGTGTGAAAAGAAATG+TGG + tig0027944:48642-48661 Msa1436590:intron 30.0%
TTAAGCTTCGTATGTACAAT+TGG + tig0027944:48670-48689 Msa1436590:intron 30.0%
!!! TTTTAGCTCTACGATTATTC+AGG + tig0027944:48727-48746 Msa1436590:intron 30.0%
GGAATAGTTAGTGAAATTAC+AGG - tig0027944:48883-48902 None:intergenic 30.0%
AAAATAACCGACCATTACAA+TGG - tig0027944:49473-49492 None:intergenic 30.0%
!! TTGTAATGGTCGGTTATTTT+TGG + tig0027944:49473-49492 Msa1436590:intron 30.0%
CAAAATAACTTAAATAGGGG+TGG - tig0027944:49545-49564 None:intergenic 30.0%
!! CACCCCTATTTAAGTTATTT+TGG + tig0027944:49543-49562 Msa1436590:intron 30.0%
! CTTATGACACATCATAGTTT+TGG - tig0027944:49624-49643 None:intergenic 30.0%
CAAAACTATGATGTGTCATA+AGG + tig0027944:49622-49641 Msa1436590:intron 30.0%
!! ATTGGTCCTTTGAGTTATTT+TGG - tig0027944:49691-49710 None:intergenic 30.0%
!! GTTTGAGTTTTGTAACAGAT+TGG - tig0027944:49709-49728 None:intergenic 30.0%
GTGCAACCAAAATAACTTAA+AGG + tig0027944:49742-49761 Msa1436590:intron 30.0%
GTTTGGTTAAATTAGATCAG+AGG - tig0027944:49800-49819 None:intergenic 30.0%
TCTATAAACAGAAAGGAACT+TGG - tig0027944:49949-49968 None:intergenic 30.0%
GATTAAAACATTGTGTCTTC+AGG + tig0027944:50062-50081 Msa1436590:intron 30.0%
TTCCTTAAAGTTACAAACAG+AGG + tig0027944:50420-50439 Msa1436590:CDS 30.0%
CTTTCTTTGTCTCAAAATTG+CGG - tig0027944:50516-50535 None:intergenic 30.0%
!!! TTTTGAGACAAAGAAAGTGA+TGG + tig0027944:50519-50538 Msa1436590:CDS 30.0%
AACGTCTCGCTAAAAAATAT+CGG - tig0027944:50665-50684 None:intergenic 30.0%
CAAATCAATTGATACAATGC+AGG + tig0027944:50772-50791 Msa1436590:intron 30.0%
TACTACCTTTGCTTGATTAA+GGG - tig0027944:51089-51108 None:intergenic 30.0%
TTACTACCTTTGCTTGATTA+AGG - tig0027944:51090-51109 None:intergenic 30.0%
TCTACAAGTAAGAACACATA+GGG - tig0027944:51167-51186 None:intergenic 30.0%
TTCTACAAGTAAGAACACAT+AGG - tig0027944:51168-51187 None:intergenic 30.0%
AAGTTGACATGAAAATGAAG+AGG + tig0027944:51237-51256 Msa1436590:CDS 30.0%
CCATATACTACTACTATCTT+TGG - tig0027944:51444-51463 None:intergenic 30.0%
CCAAAGATAGTAGTAGTATA+TGG + tig0027944:51441-51460 Msa1436590:three_prime_UTR 30.0%
!! TTTGATAATTTTCTCAGCCA+GGG - tig0027944:51530-51549 None:intergenic 30.0%
!! ATTTGATAATTTTCTCAGCC+AGG - tig0027944:51531-51550 None:intergenic 30.0%
!! GTTTGTTGTTATGGTACATT+TGG + tig0027944:51649-51668 Msa1436590:three_prime_UTR 30.0%
TTTGGAAAAAAGCTAAAAGC+AGG + tig0027944:51667-51686 Msa1436590:three_prime_UTR 30.0%
AAAAGCTAAAAGCAGGAAAA+TGG + tig0027944:51674-51693 Msa1436590:three_prime_UTR 30.0%
AAAGCTAAAAGCAGGAAAAT+GGG + tig0027944:51675-51694 Msa1436590:three_prime_UTR 30.0%
AAGACAATAGAAGGACAGAA+AGG + tig0027944:41655-41674 Msa1436590:five_prime_UTR 35.0%
ACCCTGATTATAATCTTCAG+AGG + tig0027944:41896-41915 Msa1436590:five_prime_UTR 35.0%
! GATGATGGCAAATAACTTAC+CGG + tig0027944:41929-41948 Msa1436590:CDS 35.0%
ATGATGGCAAATAACTTACC+GGG + tig0027944:41930-41949 Msa1436590:CDS 35.0%
ACAATGTCCCAACATTTAGT+GGG + tig0027944:42200-42219 Msa1436590:intron 35.0%
AGGGCATATGAATAGAAAAC+GGG + tig0027944:42290-42309 Msa1436590:intron 35.0%
! AGTATTGGAATATGAGGAAG+TGG + tig0027944:42329-42348 Msa1436590:intron 35.0%
TATTCAACATGGTGGTAGAA+TGG + tig0027944:42370-42389 Msa1436590:intron 35.0%
TGGATTCGAAGTATGTTGTT+CGG + tig0027944:42418-42437 Msa1436590:intron 35.0%
!! ATTCATTGGCTTGACATTGA+TGG - tig0027944:42614-42633 None:intergenic 35.0%
CTACGAGAAAATGAATGGTA+GGG - tig0027944:42717-42736 None:intergenic 35.0%
TCTACGAGAAAATGAATGGT+AGG - tig0027944:42718-42737 None:intergenic 35.0%
TCTGCAGATAAGATGCATTA+TGG - tig0027944:42797-42816 None:intergenic 35.0%
!!! TTCTGATTCGTAGCTTGTTT+TGG + tig0027944:42857-42876 Msa1436590:intron 35.0%
! CTTCGGAACTTTAGAAAAGA+TGG + tig0027944:43045-43064 Msa1436590:CDS 35.0%
GCACAACTGGAAAAAGAAAA+AGG + tig0027944:43068-43087 Msa1436590:CDS 35.0%
! CTTTTCTCTATCAATCAGGT+TGG + tig0027944:43230-43249 Msa1436590:intron 35.0%
!! ATCAGGTTGGTAATGAAGAA+AGG + tig0027944:43243-43262 Msa1436590:intron 35.0%
GACCATGTGCATAATATACA+TGG - tig0027944:43271-43290 None:intergenic 35.0%
GTGAATTTCAAACTGACCAA+TGG - tig0027944:43635-43654 None:intergenic 35.0%
! GTTTGAAATTCACTGATCCT+TGG + tig0027944:43642-43661 Msa1436590:intron 35.0%
GATCCTTGGGTATATAATGT+AGG + tig0027944:43656-43675 Msa1436590:intron 35.0%
! GAAAAGACATTTTTGCTGCA+AGG - tig0027944:43736-43755 None:intergenic 35.0%
!! AAATGTCTTTTCGATTGGTC+TGG + tig0027944:43744-43763 Msa1436590:intron 35.0%
!!! TGTGCAGTCTCTTTTGTTTT+TGG + tig0027944:43797-43816 Msa1436590:intron 35.0%
!!! GTGCAGTCTCTTTTGTTTTT+GGG + tig0027944:43798-43817 Msa1436590:intron 35.0%
CACATGCAAGTAATGGTAAA+TGG - tig0027944:43848-43867 None:intergenic 35.0%
TTACCATTACTTGCATGTGA+AGG + tig0027944:43849-43868 Msa1436590:intron 35.0%
TACAGATTCATTGTTGGACT+TGG - tig0027944:43881-43900 None:intergenic 35.0%
AAGTCCAACAATGAATCTGT+AGG + tig0027944:43880-43899 Msa1436590:intron 35.0%
TAAGCCTACAGATTCATTGT+TGG - tig0027944:43887-43906 None:intergenic 35.0%
CAGTTGAATAGTACTACAAG+TGG + tig0027944:43936-43955 Msa1436590:intron 35.0%
!! GCTAATTTTACTTTTGCCAC+AGG + tig0027944:44117-44136 Msa1436590:intron 35.0%
TCAAAGTTCCAAAAGAAGAC+TGG - tig0027944:44464-44483 None:intergenic 35.0%
AGATGTAAATCCATGCTTGA+AGG + tig0027944:44615-44634 Msa1436590:intron 35.0%
GATGTAAATCCATGCTTGAA+GGG + tig0027944:44616-44635 Msa1436590:intron 35.0%
TTTGAATTTACGGGAGTGAT+TGG - tig0027944:44735-44754 None:intergenic 35.0%
ATTTCTTCTGACAGAATCCA+TGG - tig0027944:44786-44805 None:intergenic 35.0%
CTGTCAGAAGAAATAGATTC+AGG + tig0027944:44792-44811 Msa1436590:CDS 35.0%
! ATCTTACATAGAGGCACATA+TGG - tig0027944:45019-45038 None:intergenic 35.0%
ATGAGCAGAACAAAATGAGT+TGG - tig0027944:45061-45080 None:intergenic 35.0%
TGTTCTGCTCATATTTCCAA+AGG + tig0027944:45069-45088 Msa1436590:intron 35.0%
!!! CATCCGTTATGTTTTGGAAA+TGG + tig0027944:45243-45262 Msa1436590:intron 35.0%
ACGAGCTTAATACACTTGAA+TGG + tig0027944:45315-45334 Msa1436590:CDS 35.0%
CGAGCTTAATACACTTGAAT+GGG + tig0027944:45316-45335 Msa1436590:CDS 35.0%
CTACATATGATTATCTCACC+AGG + tig0027944:45651-45670 Msa1436590:intron 35.0%
AATTTCTGCAGATGCATTGT+TGG - tig0027944:45680-45699 None:intergenic 35.0%
ATACTATTGCTCACTGCAAT+TGG - tig0027944:45727-45746 None:intergenic 35.0%
CTTCAGACAATTAGCAATCA+AGG + tig0027944:45775-45794 Msa1436590:CDS 35.0%
! GTCATTGACCAAAGTGTTTA+AGG - tig0027944:45851-45870 None:intergenic 35.0%
AGAATCATCAACTGAACAAG+GGG - tig0027944:45929-45948 None:intergenic 35.0%
CAGAATCATCAACTGAACAA+GGG - tig0027944:45930-45949 None:intergenic 35.0%
! TTCATTAACGGATGAAACTG+AGG - tig0027944:45962-45981 None:intergenic 35.0%
!! ATAACTTTGAAGCACTGACA+CGG + tig0027944:46262-46281 Msa1436590:intron 35.0%
! CTTCAAATTGAAGGCATATC+CGG - tig0027944:46374-46393 None:intergenic 35.0%
TTTATACACCTATCCAGCAT+TGG - tig0027944:46399-46418 None:intergenic 35.0%
CACACATTAGATTGGACTTT+GGG - tig0027944:46556-46575 None:intergenic 35.0%
ACACACATTAGATTGGACTT+TGG - tig0027944:46557-46576 None:intergenic 35.0%
TCCAATCTAATGTGTGTATG+TGG + tig0027944:46560-46579 Msa1436590:CDS 35.0%
ACCACATACACACATTAGAT+TGG - tig0027944:46564-46583 None:intergenic 35.0%
AAGTAGAGATTCACAAATCC+CGG - tig0027944:46653-46672 None:intergenic 35.0%
! AATCTCTACTTGAGCTTTGA+TGG + tig0027944:46662-46681 Msa1436590:CDS 35.0%
AAGTAACAACTTGGCTGATA+GGG - tig0027944:46694-46713 None:intergenic 35.0%
AAAGTAACAACTTGGCTGAT+AGG - tig0027944:46695-46714 None:intergenic 35.0%
TATGGAAGAGAAGAACAACT+GGG + tig0027944:46754-46773 Msa1436590:CDS 35.0%
ACGAGTTTCAACTTCAAATG+AGG + tig0027944:46777-46796 Msa1436590:CDS 35.0%
AGTATCACTTAGCAGACTAA+AGG + tig0027944:46853-46872 Msa1436590:CDS 35.0%
! CATCCATTTGTGTGCAATTT+TGG + tig0027944:47084-47103 Msa1436590:CDS 35.0%
CTAGATTTCCGGGATAAATT+TGG + tig0027944:47151-47170 Msa1436590:CDS 35.0%
ATTTCCGGGATAAATTTGGA+TGG + tig0027944:47155-47174 Msa1436590:CDS 35.0%
ACTAACATGTTTGAACAAGC+GGG - tig0027944:47230-47249 None:intergenic 35.0%
AAACATACGCAATTAGGCAA+AGG - tig0027944:47277-47296 None:intergenic 35.0%
ATTCATTTGGACTTGAAGCA+TGG - tig0027944:47441-47460 None:intergenic 35.0%
TCCAAATGAATCATGTGCAA+GGG + tig0027944:47450-47469 Msa1436590:intron 35.0%
ATTCGGCTAAACTATACCAT+GGG + tig0027944:47499-47518 Msa1436590:intron 35.0%
!! TTCAAAATTTCGGTTCGGTT+CGG - tig0027944:47666-47685 None:intergenic 35.0%
!! ACCGAACCGAAATTTTGAAA+TGG + tig0027944:47667-47686 Msa1436590:intron 35.0%
CCCGAACCATTTCAAAATTT+CGG - tig0027944:47676-47695 None:intergenic 35.0%
!!! CCGAAATTTTGAAATGGTTC+GGG + tig0027944:47673-47692 Msa1436590:intron 35.0%
! ACCATAACTTTGGTTCAGTT+CGG - tig0027944:47734-47753 None:intergenic 35.0%
ACTGAACCAAAGTTATGGTT+TGG + tig0027944:47735-47754 Msa1436590:intron 35.0%
GGTTAACCAAACCATAACTT+TGG - tig0027944:47744-47763 None:intergenic 35.0%
!!! AGGATTTTAAGGCTGTTCAA+AGG - tig0027944:48342-48361 None:intergenic 35.0%
GGATTTATCCACTATAAGCT+CGG + tig0027944:48691-48710 Msa1436590:intron 35.0%
AAACCACTTGAACTCTTTGT+TGG - tig0027944:49332-49351 None:intergenic 35.0%
!! AAAGTTCAAGTGGTTTGGTT+CGG + tig0027944:49368-49387 Msa1436590:intron 35.0%
!!! CGGTTATTTTTGGTTCAGTT+CGG + tig0027944:49483-49502 Msa1436590:intron 35.0%
GTGTGACCAAAATAACTCAA+AGG + tig0027944:49682-49701 Msa1436590:intron 35.0%
!! TTTTAAGCCTTTCGAGTAGT+TGG + tig0027944:49844-49863 Msa1436590:intron 35.0%
TACAACATAGATTCCGTACA+TGG + tig0027944:50557-50576 Msa1436590:CDS 35.0%
! CTTGAATCTTGATAGCTTGA+TGG - tig0027944:50612-50631 None:intergenic 35.0%
!! CTTTCAGGTGTTTTCAACAA+CGG + tig0027944:50798-50817 Msa1436590:CDS 35.0%
CGTAAAATCATTTGGTCAGT+TGG + tig0027944:50830-50849 Msa1436590:CDS 35.0%
! AGAAAGCGCAAGAAGATTAT+AGG + tig0027944:51050-51069 Msa1436590:CDS 35.0%
AGATTATAGGAGGATGAAGT+TGG + tig0027944:51063-51082 Msa1436590:CDS 35.0%
AAGCAAATTCTCCAATTCCT+AGG - tig0027944:51139-51158 None:intergenic 35.0%
AATATCCTTTCATTGGCGAT+TGG + tig0027944:51375-51394 Msa1436590:three_prime_UTR 35.0%
! CTGTTTATTGAACTTTGGGA+CGG - tig0027944:51411-51430 None:intergenic 35.0%
ATAGTAGTAGTATATGGGGA+TGG + tig0027944:51447-51466 Msa1436590:three_prime_UTR 35.0%
AATATGAAAAGGGTGGTGAC+TGG - tig0027944:41824-41843 None:intergenic 40.0%
AGAGGTTTATGCGATGATGA+TGG + tig0027944:41914-41933 Msa1436590:exon 40.0%
CTTGTTGGATCAGAGATACA+TGG + tig0027944:41957-41976 Msa1436590:CDS 40.0%
ATATGAAGCTGGAGTGAAGT+AGG - tig0027944:42008-42027 None:intergenic 40.0%
CTGGAAAAGACATATGAAGC+TGG - tig0027944:42019-42038 None:intergenic 40.0%
CACAATGTCCCAACATTTAG+TGG + tig0027944:42199-42218 Msa1436590:intron 40.0%
AGCATGGCATGAATCTCATT+GGG - tig0027944:42571-42590 None:intergenic 40.0%
AAGCATGGCATGAATCTCAT+TGG - tig0027944:42572-42591 None:intergenic 40.0%
! TAAAGTTCCGAAGCATCTTG+CGG - tig0027944:43038-43057 None:intergenic 40.0%
TTAGAAAAGATGGGCACAAC+TGG + tig0027944:43055-43074 Msa1436590:CDS 40.0%
CTCATGAGCACTTAAAAGTG+AGG + tig0027944:43112-43131 Msa1436590:intron 40.0%
!! CTTTTATCTTTTCAGGAGCC+TGG + tig0027944:43440-43459 Msa1436590:intron 40.0%
GTGTTTCACGGTAATGAACA+AGG - tig0027944:43476-43495 None:intergenic 40.0%
TCATTACCGTGAAACACAAG+AGG + tig0027944:43479-43498 Msa1436590:CDS 40.0%
CGGCTAAAACAATACACATG+TGG - tig0027944:43587-43606 None:intergenic 40.0%
CCAATGGCAGCATACATATA+TGG - tig0027944:43619-43638 None:intergenic 40.0%
CCATATATGTATGCTGCCAT+TGG + tig0027944:43616-43635 Msa1436590:intron 40.0%
GTAGTCGAGACATGTTCAAA+CGG - tig0027944:43687-43706 None:intergenic 40.0%
CTACCTTCACATGCAAGTAA+TGG - tig0027944:43855-43874 None:intergenic 40.0%
CAACCACCATTAGTTCATTG+CGG + tig0027944:44235-44254 Msa1436590:intron 40.0%
TAACCGCAATGAACTAATGG+TGG - tig0027944:44241-44260 None:intergenic 40.0%
AGAAGACTGGATGGTGAAAT+TGG - tig0027944:44451-44470 None:intergenic 40.0%
! TTCACCATCCAGTCTTCTTT+TGG + tig0027944:44453-44472 Msa1436590:intron 40.0%
AGTTCCAAAAGAAGACTGGA+TGG - tig0027944:44460-44479 None:intergenic 40.0%
CATAAATAGCCCTTCAAGCA+TGG - tig0027944:44628-44647 None:intergenic 40.0%
TGGCTCATGATACAGTTTCA+GGG + tig0027944:44705-44724 Msa1436590:intron 40.0%
CATACTACTCGAAGTAGAGA+TGG + tig0027944:44883-44902 Msa1436590:intron 40.0%
! GCAGAACAAAATGAGTTGGA+AGG - tig0027944:45057-45076 None:intergenic 40.0%
!!! AGTTTCTTTTTTGGCTCACG+TGG + tig0027944:45101-45120 Msa1436590:intron 40.0%
CACGTGGTGATATGCATATA+TGG + tig0027944:45117-45136 Msa1436590:intron 40.0%
GGCAACATAGTTGGATTTAC+TGG + tig0027944:45204-45223 Msa1436590:intron 40.0%
! TAAGATCGTTTGCTACGACT+AGG - tig0027944:45346-45365 None:intergenic 40.0%
AATCACCATTTACCTCCGTT+AGG - tig0027944:45383-45402 None:intergenic 40.0%
AACACTACCAGTTACATGTC+TGG + tig0027944:45414-45433 Msa1436590:intron 40.0%
AAGGATATCGAAATGAGCAG+AGG + tig0027944:45794-45813 Msa1436590:CDS 40.0%
CAATGACAGATTGCAAAGTC+AGG + tig0027944:45864-45883 Msa1436590:CDS 40.0%
AAGGGGAATCAGACATGATT+TGG - tig0027944:45912-45931 None:intergenic 40.0%
GCAGAATCATCAACTGAACA+AGG - tig0027944:45931-45950 None:intergenic 40.0%
!! TCAGTTGATGATTCTGCTCT+TGG + tig0027944:45934-45953 Msa1436590:CDS 40.0%
ACCATATTCATCTCTGGTAG+TGG + tig0027944:45981-46000 Msa1436590:CDS 40.0%
TCCACTACCAGAGATGAATA+TGG - tig0027944:45985-46004 None:intergenic 40.0%
GTCTTCCACAGAGAAATCAA+AGG + tig0027944:46068-46087 Msa1436590:CDS 40.0%
! GGAAACCTTTGATTTCTCTG+TGG - tig0027944:46076-46095 None:intergenic 40.0%
! ATTATTACCGGTGCTGAATG+TGG - tig0027944:46291-46310 None:intergenic 40.0%
ATCCGGTATTCAATATGCGT+CGG - tig0027944:46357-46376 None:intergenic 40.0%
! GCATTGGCACTTCAAATTGA+AGG - tig0027944:46383-46402 None:intergenic 40.0%
! TCAATTTGAAGTGCCAATGC+TGG + tig0027944:46383-46402 Msa1436590:intron 40.0%
TATGAAAGAGTCCAGTCACT+AGG - tig0027944:46517-46536 None:intergenic 40.0%
ACATTAGATTGGACTTTGGG+AGG - tig0027944:46553-46572 None:intergenic 40.0%
TGTTCCTGCAGAAATTGTTC+AGG + tig0027944:46592-46611 Msa1436590:CDS 40.0%
CTGCAGAAATTGTTCAGGAT+GGG + tig0027944:46597-46616 Msa1436590:CDS 40.0%
TGCAGAAATTGTTCAGGATG+GGG + tig0027944:46598-46617 Msa1436590:CDS 40.0%
TTCTCTTCCATAGAAGCTAC+TGG - tig0027944:46746-46765 None:intergenic 40.0%
CTATGGAAGAGAAGAACAAC+TGG + tig0027944:46753-46772 Msa1436590:CDS 40.0%
ATCACTTAGCAGACTAAAGG+AGG + tig0027944:46856-46875 Msa1436590:CDS 40.0%
!! GCATCTTTAGCTTGCGAAAA+TGG - tig0027944:46962-46981 None:intergenic 40.0%
ACTACTGAATATGATGCGCA+AGG + tig0027944:47052-47071 Msa1436590:CDS 40.0%
CTTCATTGGGCAGCATATTA+CGG + tig0027944:47184-47203 Msa1436590:CDS 40.0%
CTAACATGTTTGAACAAGCG+GGG - tig0027944:47229-47248 None:intergenic 40.0%
TAGACAAACATGGTCAGCAA+GGG - tig0027944:47337-47356 None:intergenic 40.0%
TTAGACAAACATGGTCAGCA+AGG - tig0027944:47338-47357 None:intergenic 40.0%
TTAATCCAAGGTAAGTGAGC+CGG + tig0027944:47407-47426 Msa1436590:intron 40.0%
GTCCAAATGAATCATGTGCA+AGG + tig0027944:47449-47468 Msa1436590:intron 40.0%
CCAAATGAATCATGTGCAAG+GGG + tig0027944:47451-47470 Msa1436590:intron 40.0%
CAAATGAATCATGTGCAAGG+GGG + tig0027944:47452-47471 Msa1436590:intron 40.0%
CATGGTATAGTTTAGCCGAA+TGG - tig0027944:47500-47519 None:intergenic 40.0%
CATTCGGCTAAACTATACCA+TGG + tig0027944:47498-47517 Msa1436590:intron 40.0%
CTACAAACTTAAAGGACCCA+TGG - tig0027944:47518-47537 None:intergenic 40.0%
ACCGAACTGAACCAAAGTTA+TGG + tig0027944:47730-47749 Msa1436590:intron 40.0%
!! TTCGGTTCGGTATGGTTAAT+AGG - tig0027944:47776-47795 None:intergenic 40.0%
! AACAGAGGGTAGTATTGGAT+AGG - tig0027944:48362-48381 None:intergenic 40.0%
ATTCAGGAAGCTCAAAAACG+AGG + tig0027944:48743-48762 Msa1436590:intron 40.0%
GATCCAACAAAGAGTTCAAG+TGG + tig0027944:49326-49345 Msa1436590:intron 40.0%
!! TTGGTTCGGTTCAAACAGTT+CGG + tig0027944:49382-49401 Msa1436590:intron 40.0%
TCGTGAACCATTGTAATGGT+CGG + tig0027944:49463-49482 Msa1436590:intron 40.0%
GCGTGAAGATATGAATGGTT+TGG - tig0027944:49817-49836 None:intergenic 40.0%
CCATTGCGTGAAGATATGAA+TGG - tig0027944:49822-49841 None:intergenic 40.0%
CCATTCATATCTTCACGCAA+TGG + tig0027944:49819-49838 Msa1436590:intron 40.0%
AAGTCAACCAACTACTCGAA+AGG - tig0027944:49854-49873 None:intergenic 40.0%
! TTTCGAGTAGTTGGTTGACT+TGG + tig0027944:49853-49872 Msa1436590:intron 40.0%
TTGTGTCTTCAGGGAGAAAA+TGG + tig0027944:50072-50091 Msa1436590:intron 40.0%
TGGCTTAGCAGCTTATCTTT+CGG + tig0027944:50204-50223 Msa1436590:CDS 40.0%
TTCAATGACATGAGCTTAGC+TGG + tig0027944:50247-50266 Msa1436590:CDS 40.0%
AGCTTAGCTGGAAATATCAG+TGG + tig0027944:50259-50278 Msa1436590:CDS 40.0%
GTAAGGTTCTCGGAATTTAC+TGG - tig0027944:50310-50329 None:intergenic 40.0%
GCTCTATGTGAAAGATACAC+TGG + tig0027944:50339-50358 Msa1436590:CDS 40.0%
! CACGCATACAAGAAGCATAT+AGG + tig0027944:50392-50411 Msa1436590:CDS 40.0%
CGCCTCTGTTTGTAACTTTA+AGG - tig0027944:50425-50444 None:intergenic 40.0%
CTTTGTCTCAAAATTGCGGA+AGG - tig0027944:50512-50531 None:intergenic 40.0%
CTCTACGAATCTTCCATGTA+CGG - tig0027944:50573-50592 None:intergenic 40.0%
GTTGCTGAACTGACGAATAA+AGG - tig0027944:50742-50761 None:intergenic 40.0%
CGTTGGCGTTTAAAGAGAAA+GGG + tig0027944:50875-50894 Msa1436590:CDS 40.0%
ATTCTTCCTCGGTATTAAGC+CGG - tig0027944:50913-50932 None:intergenic 40.0%
GCTTAATACCGAGGAAGAAT+CGG + tig0027944:50913-50932 Msa1436590:CDS 40.0%
CTTAATACCGAGGAAGAATC+GGG + tig0027944:50914-50933 Msa1436590:CDS 40.0%
ATGCAGAGGAGGAATTCTTT+CGG + tig0027944:50957-50976 Msa1436590:CDS 40.0%
CTTCTTGCGCTTTCTTAGAA+CGG - tig0027944:51045-51064 None:intergenic 40.0%
AAGCGCAAGAAGATTATAGG+AGG + tig0027944:51053-51072 Msa1436590:CDS 40.0%
AGAATATTCCTTTGTGCAGC+TGG + tig0027944:51184-51203 Msa1436590:intron 40.0%
TCTCTATTTCCTTGCACAGT+TGG + tig0027944:51479-51498 Msa1436590:three_prime_UTR 40.0%
TCTGCTCTGTTCGGATTGAT+TGG - tig0027944:41748-41767 None:intergenic 45.0%
AACTTACCGGGTCAACTTGT+TGG + tig0027944:41942-41961 Msa1436590:CDS 45.0%
! TCTGATCCAACAAGTTGACC+CGG - tig0027944:41951-41970 None:intergenic 45.0%
CATGGATTCCACACATTGCA+AGG + tig0027944:41975-41994 Msa1436590:CDS 45.0%
GAAGCTTACCTTGCAATGTG+TGG - tig0027944:41986-42005 None:intergenic 45.0%
! TGTCCCAACATTTAGTGGGT+TGG + tig0027944:42204-42223 Msa1436590:intron 45.0%
GGACCAACCCACTAAATGTT+GGG - tig0027944:42210-42229 None:intergenic 45.0%
AGTACAGGTAAGATGTGCAG+CGG - tig0027944:42456-42475 None:intergenic 45.0%
TGTTTGACCGCAAGATGCTT+CGG + tig0027944:43028-43047 Msa1436590:CDS 45.0%
CACAGACCTCTTGTGTTTCA+CGG - tig0027944:43488-43507 None:intergenic 45.0%
!!! GTCTTTTCGATTGGTCTGGT+TGG + tig0027944:43748-43767 Msa1436590:intron 45.0%
AAGAGACTGCACACTACACA+CGG - tig0027944:43790-43809 None:intergenic 45.0%
!! CTAGCACTGATGAGTTAGGT+AGG - tig0027944:44542-44561 None:intergenic 45.0%
CTACCTAACTCATCAGTGCT+AGG + tig0027944:44540-44559 Msa1436590:intron 45.0%
!! CATCCTAGCACTGATGAGTT+AGG - tig0027944:44546-44565 None:intergenic 45.0%
GTGGCTCATGATACAGTTTC+AGG + tig0027944:44704-44723 Msa1436590:intron 45.0%
ACAGAATCCATGGTGCAGAT+GGG - tig0027944:44776-44795 None:intergenic 45.0%
GGACCAAAACTGCATATGCT+GGG + tig0027944:44814-44833 Msa1436590:CDS 45.0%
GACCAAAACTGCATATGCTG+GGG + tig0027944:44815-44834 Msa1436590:CDS 45.0%
ACCAAAACTGCATATGCTGG+GGG + tig0027944:44816-44835 Msa1436590:CDS 45.0%
ACTCGAAGTAGAGATGGCAA+TGG + tig0027944:44889-44908 Msa1436590:intron 45.0%
CTCGAAGTAGAGATGGCAAT+GGG + tig0027944:44890-44909 Msa1436590:intron 45.0%
TCGAAGTAGAGATGGCAATG+GGG + tig0027944:44891-44910 Msa1436590:intron 45.0%
! GTACTGATAGAAGATCCCAC+AGG - tig0027944:44953-44972 None:intergenic 45.0%
CAGTCAAAAGCCATGAACTG+AGG + tig0027944:45288-45307 Msa1436590:CDS 45.0%
GTGCTTTCCAGACATGTAAC+TGG - tig0027944:45424-45443 None:intergenic 45.0%
ATTGCTCACTGCAATTGGCT+GGG - tig0027944:45722-45741 None:intergenic 45.0%
TATTGCTCACTGCAATTGGC+TGG - tig0027944:45723-45742 None:intergenic 45.0%
AACCATCCTGTCTCTTCAAG+TGG + tig0027944:45817-45836 Msa1436590:CDS 45.0%
TCAACACCACTTGAAGAGAC+AGG - tig0027944:45826-45845 None:intergenic 45.0%
TTGCAAAGTCAGGACAGCTT+TGG + tig0027944:45874-45893 Msa1436590:CDS 45.0%
!! TCAGGACAGCTTTGGAATGT+GGG + tig0027944:45882-45901 Msa1436590:CDS 45.0%
CACCGACGCATATTGAATAC+CGG + tig0027944:46352-46371 Msa1436590:intron 45.0%
! TTGAAGTGCCAATGCTGGAT+AGG + tig0027944:46388-46407 Msa1436590:intron 45.0%
CCATCCTGAACAATTTCTGC+AGG - tig0027944:46599-46618 None:intergenic 45.0%
CCTGCAGAAATTGTTCAGGA+TGG + tig0027944:46596-46615 Msa1436590:CDS 45.0%
TTCACAAATCCCGGAGAATG+CGG - tig0027944:46644-46663 None:intergenic 45.0%
CAACTTGGCTGATAGGGTTA+TGG - tig0027944:46688-46707 None:intergenic 45.0%
GCTACTGGATCATGCAAAAC+AGG - tig0027944:46731-46750 None:intergenic 45.0%
GCATGATCCAGTAGCTTCTA+TGG + tig0027944:46736-46755 Msa1436590:CDS 45.0%
TTAGCAGACTAAAGGAGGCA+AGG + tig0027944:46861-46880 Msa1436590:CDS 45.0%
TAGCAGACTAAAGGAGGCAA+GGG + tig0027944:46862-46881 Msa1436590:CDS 45.0%
CAAGCTAAAGATGCCCTGTT+TGG + tig0027944:46968-46987 Msa1436590:CDS 45.0%
CAGGCTTATCGCTAGATTTC+CGG + tig0027944:47140-47159 Msa1436590:CDS 45.0%
AGGCTTATCGCTAGATTTCC+GGG + tig0027944:47141-47160 Msa1436590:CDS 45.0%
CCGTCCATCCAAATTTATCC+CGG - tig0027944:47162-47181 None:intergenic 45.0%
CCGGGATAAATTTGGATGGA+CGG + tig0027944:47159-47178 Msa1436590:CDS 45.0%
TTGAAGCATGGACAATGCAC+CGG - tig0027944:47429-47448 None:intergenic 45.0%
CCCCTTGCACATGATTCATT+TGG - tig0027944:47454-47473 None:intergenic 45.0%
! TGGTCCTTTAAGTTTAGGGG+TGG + tig0027944:47611-47630 Msa1436590:intron 45.0%
! GGTCCTTTAAGTTTAGGGGT+GGG + tig0027944:47612-47631 Msa1436590:intron 45.0%
ATGCCCACCCCTAAACTTAA+AGG - tig0027944:47618-47637 None:intergenic 45.0%
! TTTAAGTTTAGGGGTGGGCA+TGG + tig0027944:47617-47636 Msa1436590:intron 45.0%
!!! TCGGTTCGGTTCGGTTTTTT+GGG - tig0027944:47652-47671 None:intergenic 45.0%
!!! TTCGGTTCGGTTCGGTTTTT+TGG - tig0027944:47653-47672 None:intergenic 45.0%
!! AATTTCGGTTCGGTTCGGTT+CGG - tig0027944:47661-47680 None:intergenic 45.0%
!!! TGTTTTGGTTCGGTTCGGTA+TGG - tig0027944:47784-47803 None:intergenic 45.0%
TCAGAGATCCGAGCTTATAG+TGG - tig0027944:48702-48721 None:intergenic 45.0%
TCGGTTCAAACAGTTCGGTT+CGG + tig0027944:49387-49406 Msa1436590:intron 45.0%
!! GGTTCAAGATGGTTCGGTTA+TGG + tig0027944:49408-49427 Msa1436590:intron 45.0%
CGGTTCGTGAACCATTGTAA+TGG + tig0027944:49459-49478 Msa1436590:intron 45.0%
! TTGCAACTTTGCTGTCAGCT+GGG + tig0027944:50095-50114 Msa1436590:CDS 45.0%
ATCCAACTCACCAAAACCCT+GGG + tig0027944:50140-50159 Msa1436590:CDS 45.0%
CCTCGTATAAGCAAGATCAG+CGG - tig0027944:50176-50195 None:intergenic 45.0%
CGCTGATCTTGCTTATACGA+GGG + tig0027944:50174-50193 Msa1436590:CDS 45.0%
GCTGATCTTGCTTATACGAG+GGG + tig0027944:50175-50194 Msa1436590:CDS 45.0%
GCTTATACGAGGGGTTATCA+TGG + tig0027944:50184-50203 Msa1436590:CDS 45.0%
TGGAAATATCAGTGGCTCAC+TGG + tig0027944:50267-50286 Msa1436590:CDS 45.0%
AAATTCCGAGAACCTTACCG+AGG + tig0027944:50312-50331 Msa1436590:CDS 45.0%
TTTCACATAGAGCTGCTCCT+CGG - tig0027944:50332-50351 None:intergenic 45.0%
AAGATACACTGGCAGCTTAC+CGG + tig0027944:50350-50369 Msa1436590:CDS 45.0%
! TTTTGCGTGCTTCAGCTTCT+GGG - tig0027944:50462-50481 None:intergenic 45.0%
! ATTTTGCGTGCTTCAGCTTC+TGG - tig0027944:50463-50482 None:intergenic 45.0%
! ATACAATGCAGGCTGCTTTC+AGG + tig0027944:50783-50802 Msa1436590:intron 45.0%
AATCATTTGGTCAGTTGGCG+TGG + tig0027944:50835-50854 Msa1436590:CDS 45.0%
TTGAGAAAGCAGTGTTGCGT+TGG + tig0027944:50858-50877 Msa1436590:CDS 45.0%
! GCGTTGGCGTTTAAAGAGAA+AGG + tig0027944:50874-50893 Msa1436590:CDS 45.0%
TTAAAGAGAAAGGGCTTCCG+TGG + tig0027944:50884-50903 Msa1436590:CDS 45.0%
TAAAGAGAAAGGGCTTCCGT+GGG + tig0027944:50885-50904 Msa1436590:CDS 45.0%
GAATCAGCAAAGTGATGCAG+AGG + tig0027944:50943-50962 Msa1436590:CDS 45.0%
!! AGGAATTCTTTCGGACTGGT+AGG + tig0027944:50966-50985 Msa1436590:CDS 45.0%
ACTTCTCTCGACACGTTCTT+CGG - tig0027944:50999-51018 None:intergenic 45.0%
! GAGAAGTGTAATACGAGTGC+AGG + tig0027944:51012-51031 Msa1436590:CDS 45.0%
GTTGGCCCTTAATCAAGCAA+AGG + tig0027944:51081-51100 Msa1436590:CDS 45.0%
ATTCCTTTGTGCAGCTGGAA+CGG + tig0027944:51189-51208 Msa1436590:intron 45.0%
!! AACTTTGGGACGGCATATAG+AGG - tig0027944:51401-51420 None:intergenic 45.0%
! GCTTAAAGCTCCAGTTTTCG+AGG - tig0027944:51506-51525 None:intergenic 45.0%
!!! CATTTATTTTAATTTTTTTT+AGG + tig0027944:42270-42289 Msa1436590:intron 5.0%
AGAGAAGGGTCTGCTCTGTT+CGG - tig0027944:41757-41776 None:intergenic 50.0%
GGGACCAACCCACTAAATGT+TGG - tig0027944:42211-42230 None:intergenic 50.0%
GTACAGGTAAGATGTGCAGC+GGG - tig0027944:42455-42474 None:intergenic 50.0%
CCATAATGCTCGCAACATCG+AGG - tig0027944:42522-42541 None:intergenic 50.0%
CCTCGATGTTGCGAGCATTA+TGG + tig0027944:42519-42538 Msa1436590:CDS 50.0%
CGATGTTGCGAGCATTATGG+AGG + tig0027944:42522-42541 Msa1436590:CDS 50.0%
TGGAGGAAGCAAGAACGAGA+TGG + tig0027944:42539-42558 Msa1436590:CDS 50.0%
GAACAAGGACGATGTGTTCC+AGG - tig0027944:43461-43480 None:intergenic 50.0%
GACAGAATCCATGGTGCAGA+TGG - tig0027944:44777-44796 None:intergenic 50.0%
GGGACCAAAACTGCATATGC+TGG + tig0027944:44813-44832 Msa1436590:CDS 50.0%
! ACCCCCAGCATATGCAGTTT+TGG - tig0027944:44820-44839 None:intergenic 50.0%
AAGTAGAGATGGCAATGGGG+TGG + tig0027944:44894-44913 Msa1436590:intron 50.0%
AGTAGAGATGGCAATGGGGT+GGG + tig0027944:44895-44914 Msa1436590:intron 50.0%
ATCCCACAGGACAGAGAGTA+GGG - tig0027944:44940-44959 None:intergenic 50.0%
AACACCTCTGCTGTGCCTAA+CGG + tig0027944:45365-45384 Msa1436590:CDS 50.0%
CTGTGCCTAACGGAGGTAAA+TGG + tig0027944:45375-45394 Msa1436590:intron 50.0%
! CAGATGCATTGTTGGCTACC+TGG - tig0027944:45672-45691 None:intergenic 50.0%
CACCACTTGAAGAGACAGGA+TGG - tig0027944:45822-45841 None:intergenic 50.0%
!! GTCAGGACAGCTTTGGAATG+TGG + tig0027944:45881-45900 Msa1436590:CDS 50.0%
TTCGTGCAGATCCTAGTGAC+TGG + tig0027944:46503-46522 Msa1436590:intron 50.0%
TTGGATGGACGGCTCTTCAT+TGG + tig0027944:47170-47189 Msa1436590:CDS 50.0%
TGGATGGACGGCTCTTCATT+GGG + tig0027944:47171-47190 Msa1436590:CDS 50.0%
ATTGGGCAGCATATTACGGC+AGG + tig0027944:47188-47207 Msa1436590:CDS 50.0%
AAACCGAACCGAACCGTTTC+AGG + tig0027944:47697-47716 Msa1436590:intron 50.0%
!! AAGCCTGAAACGGTTCGGTT+CGG - tig0027944:47703-47722 None:intergenic 50.0%
! GGTTAGCTCCAAGCCTGAAA+CGG - tig0027944:47713-47732 None:intergenic 50.0%
!! CAGTTCGGTTCGGTTCAAGA+TGG + tig0027944:49397-49416 Msa1436590:intron 50.0%
!! CGGTTCGGTTCAAGATGGTT+CGG + tig0027944:49402-49421 Msa1436590:intron 50.0%
! GTTGCAACTTTGCTGTCAGC+TGG + tig0027944:50094-50113 Msa1436590:CDS 50.0%
! TGCAACTTTGCTGTCAGCTG+GGG + tig0027944:50096-50115 Msa1436590:CDS 50.0%
GGCAAAGCCAAACTTGGTCA+CGG + tig0027944:50117-50136 Msa1436590:CDS 50.0%
GTTGGATCCGTGACCAAGTT+TGG - tig0027944:50127-50146 None:intergenic 50.0%
GATCCAACTCACCAAAACCC+TGG + tig0027944:50139-50158 Msa1436590:CDS 50.0%
TCCAACTCACCAAAACCCTG+GGG + tig0027944:50141-50160 Msa1436590:CDS 50.0%
CCGCTGATCTTGCTTATACG+AGG + tig0027944:50173-50192 Msa1436590:CDS 50.0%
TGGCTCACTGGAAACTAGCA+CGG + tig0027944:50279-50298 Msa1436590:CDS 50.0%
! TTGTATGCGTGCTGCTGCAT+CGG - tig0027944:50383-50402 None:intergenic 50.0%
CTGATCTCCCGATTCTTCCT+CGG - tig0027944:50924-50943 None:intergenic 50.0%
TCAGCAAAGTGATGCAGAGG+AGG + tig0027944:50946-50965 Msa1436590:CDS 50.0%
GAGGAGGAATTCTTTCGGAC+TGG + tig0027944:50962-50981 Msa1436590:CDS 50.0%
TTCCTTTGTGCAGCTGGAAC+GGG + tig0027944:51190-51209 Msa1436590:intron 50.0%
GCACACTCAGCAGAATGTGA+AGG + tig0027944:51302-51321 Msa1436590:three_prime_UTR 50.0%
ACTCAGCAGAATGTGAAGGC+AGG + tig0027944:51306-51325 Msa1436590:three_prime_UTR 50.0%
AGCAGAATGTGAAGGCAGGT+TGG + tig0027944:51310-51329 Msa1436590:three_prime_UTR 50.0%
AGAGGCCAATCGCCAATGAA+AGG - tig0027944:51383-51402 None:intergenic 50.0%
TTTCGAGGTCCAACTGTGCA+AGG - tig0027944:51491-51510 None:intergenic 50.0%
CACAGTTGGACCTCGAAAAC+TGG + tig0027944:51493-51512 Msa1436590:three_prime_UTR 50.0%
!! AACTGGAGCTTTAAGCACCC+TGG + tig0027944:51510-51529 Msa1436590:three_prime_UTR 50.0%
AGATGGCAATGGGGTGGGAT+GGG + tig0027944:44900-44919 Msa1436590:intron 55.0%
TTCCCCTACTCTCTGTCCTG+TGG + tig0027944:44934-44953 Msa1436590:intron 55.0%
TCCCCTACTCTCTGTCCTGT+GGG + tig0027944:44935-44954 Msa1436590:intron 55.0%
TCCCACAGGACAGAGAGTAG+GGG - tig0027944:44939-44958 None:intergenic 55.0%
GATCCCACAGGACAGAGAGT+AGG - tig0027944:44941-44960 None:intergenic 55.0%
GCTCGTGAAGCCTCAGTTCA+TGG - tig0027944:45301-45320 None:intergenic 55.0%
TTACTGATGTGTCCCCTGCG+TGG + tig0027944:46043-46062 Msa1436590:CDS 55.0%
TACTGATGTGTCCCCTGCGT+GGG + tig0027944:46044-46063 Msa1436590:CDS 55.0%
ACGGACACCACATTCAGCAC+CGG + tig0027944:46281-46300 Msa1436590:intron 55.0%
! CGTCGGTGTCTGACACATGT+GGG - tig0027944:46340-46359 None:intergenic 55.0%
AATGCGGTGGTACCCAGCAA+CGG - tig0027944:46628-46647 None:intergenic 55.0%
ACAAATCCCGGAGAATGCGG+TGG - tig0027944:46641-46660 None:intergenic 55.0%
!! ATGCACCGGCTCACTTACCT+TGG - tig0027944:47415-47434 None:intergenic 55.0%
GTTTAGGGGTGGGCATGGTT+CGG + tig0027944:47622-47641 Msa1436590:intron 55.0%
GAACCGAACCGTTTCAGGCT+TGG + tig0027944:47702-47721 Msa1436590:intron 55.0%
GCTCCAAGCCTGAAACGGTT+CGG - tig0027944:47708-47727 None:intergenic 55.0%
! TTGGTTCAGTTCGGTTCGCG+CGG + tig0027944:49492-49511 Msa1436590:intron 55.0%
AGCTGGGGCAAAGCCAAACT+TGG + tig0027944:50111-50130 Msa1436590:CDS 55.0%
CCAACTCACCAAAACCCTGG+GGG + tig0027944:50142-50161 Msa1436590:CDS 55.0%
! CAGTACATCCCCCAGGGTTT+TGG - tig0027944:50153-50172 None:intergenic 55.0%
CTGCTCCTCGGTAAGGTTCT+CGG - tig0027944:50320-50339 None:intergenic 55.0%
CATAGAGCTGCTCCTCGGTA+AGG - tig0027944:50327-50346 None:intergenic 55.0%
TTCCCGTTCCAGCTGCACAA+AGG - tig0027944:51195-51214 None:intergenic 55.0%
GCTCGCAACATCGAGGTCTG+AGG - tig0027944:42515-42534 None:intergenic 60.0%
CCATGGTGCAGATGGGTCAG+AGG - tig0027944:44769-44788 None:intergenic 60.0%
CCTCTGACCCATCTGCACCA+TGG + tig0027944:44766-44785 Msa1436590:CDS 60.0%
GAGATGGCAATGGGGTGGGA+TGG + tig0027944:44899-44918 Msa1436590:intron 60.0%
AATGGGGTGGGATGGGAGCT+GGG + tig0027944:44907-44926 Msa1436590:intron 60.0%
ACCTCTGCTGTGCCTAACGG+AGG + tig0027944:45368-45387 Msa1436590:CDS 60.0%
ACCTCCGTTAGGCACAGCAG+AGG - tig0027944:45372-45391 None:intergenic 60.0%
TGTGGAAGACACCCACGCAG+GGG - tig0027944:46058-46077 None:intergenic 60.0%
CTGTGGAAGACACCCACGCA+GGG - tig0027944:46059-46078 None:intergenic 60.0%
TCTGTGGAAGACACCCACGC+AGG - tig0027944:46060-46079 None:intergenic 60.0%
! GCGTCGGTGTCTGACACATG+TGG - tig0027944:46341-46360 None:intergenic 60.0%
AGGATGGGGTCTACCGTTGC+TGG + tig0027944:46612-46631 Msa1436590:CDS 60.0%
GGATGGGGTCTACCGTTGCT+GGG + tig0027944:46613-46632 Msa1436590:CDS 60.0%
CTGGGTACCACCGCATTCTC+CGG + tig0027944:46631-46650 Msa1436590:CDS 60.0%
TGGGTACCACCGCATTCTCC+GGG + tig0027944:46632-46651 Msa1436590:CDS 60.0%
! TCAGTTCGGTTCGCGCGGTT+CGG + tig0027944:49497-49516 Msa1436590:intron 60.0%
!! CCCCCAGGGTTTTGGTGAGT+TGG - tig0027944:50145-50164 None:intergenic 60.0%
CGGTATTAAGCCGGAGCCCA+CGG - tig0027944:50904-50923 None:intergenic 60.0%
TGGGCTCCGGCTTAATACCG+AGG + tig0027944:50904-50923 Msa1436590:CDS 60.0%
CAATGGGGTGGGATGGGAGC+TGG + tig0027944:44906-44925 Msa1436590:intron 65.0%
!! TCGGTTCGCGCGGTTCGGTT+CGG + tig0027944:49502-49521 Msa1436590:intron 65.0%
!! GCGCGGTTCGGTTCGGTTCA+TGG + tig0027944:49509-49528 Msa1436590:intron 65.0%
CAGCGGCAGTACATCCCCCA+GGG - tig0027944:50159-50178 None:intergenic 65.0%
TCAGCGGCAGTACATCCCCC+AGG - tig0027944:50160-50179 None:intergenic 65.0%
! CTGCTGCATCGGCAGCTGTC+CGG - tig0027944:50372-50391 None:intergenic 65.0%
GCGTGCTTCAGCTTCTGGGC+TGG - tig0027944:50458-50477 None:intergenic 65.0%
GAAAGGGCTTCCGTGGGCTC+CGG + tig0027944:50891-50910 Msa1436590:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0027944 gene 41654 51698 41654 ID=Msa1436590;Name=Msa1436590
tig0027944 mRNA 41654 51698 41654 ID=Msa1436590-mRNA-1;Parent=Msa1436590;Name=Msa1436590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=171|1|1|1|0.92|0.85|14|436|924
tig0027944 exon 41654 41789 41654 ID=Msa1436590-mRNA-1:exon:10267;Parent=Msa1436590-mRNA-1
tig0027944 exon 41892 41996 41892 ID=Msa1436590-mRNA-1:exon:10268;Parent=Msa1436590-mRNA-1
tig0027944 exon 42518 42643 42518 ID=Msa1436590-mRNA-1:exon:10269;Parent=Msa1436590-mRNA-1
tig0027944 exon 43013 43128 43013 ID=Msa1436590-mRNA-1:exon:10270;Parent=Msa1436590-mRNA-1
tig0027944 exon 43248 43336 43248 ID=Msa1436590-mRNA-1:exon:10271;Parent=Msa1436590-mRNA-1
tig0027944 exon 43455 43500 43455 ID=Msa1436590-mRNA-1:exon:10272;Parent=Msa1436590-mRNA-1
tig0027944 exon 44720 44837 44720 ID=Msa1436590-mRNA-1:exon:10273;Parent=Msa1436590-mRNA-1
tig0027944 exon 45270 45389 45270 ID=Msa1436590-mRNA-1:exon:10274;Parent=Msa1436590-mRNA-1
tig0027944 exon 45479 45537 45479 ID=Msa1436590-mRNA-1:exon:10275;Parent=Msa1436590-mRNA-1
tig0027944 exon 45673 46089 45673 ID=Msa1436590-mRNA-1:exon:10276;Parent=Msa1436590-mRNA-1
tig0027944 exon 46512 47209 46512 ID=Msa1436590-mRNA-1:exon:10277;Parent=Msa1436590-mRNA-1
tig0027944 exon 50084 50630 50084 ID=Msa1436590-mRNA-1:exon:10278;Parent=Msa1436590-mRNA-1
tig0027944 exon 50794 51102 50794 ID=Msa1436590-mRNA-1:exon:10279;Parent=Msa1436590-mRNA-1
tig0027944 exon 51203 51698 51203 ID=Msa1436590-mRNA-1:exon:10280;Parent=Msa1436590-mRNA-1
tig0027944 five_prime_UTR 41654 41789 41654 ID=Msa1436590-mRNA-1:five_prime_utr;Parent=Msa1436590-mRNA-1
tig0027944 five_prime_UTR 41892 41926 41892 ID=Msa1436590-mRNA-1:five_prime_utr;Parent=Msa1436590-mRNA-1
tig0027944 CDS 41927 41996 41927 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 42518 42643 42518 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 43013 43128 43013 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 43248 43336 43248 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 43455 43500 43455 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 44720 44837 44720 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 45270 45389 45270 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 45479 45537 45479 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 45673 46089 45673 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 46512 47209 46512 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 50084 50630 50084 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 50794 51102 50794 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 CDS 51203 51262 51203 ID=Msa1436590-mRNA-1:cds;Parent=Msa1436590-mRNA-1
tig0027944 three_prime_UTR 51263 51698 51263 ID=Msa1436590-mRNA-1:three_prime_utr;Parent=Msa1436590-mRNA-1
Gene Sequence

>Msa1436590

ATGATGATGGCAAATAACTTACCGGGTCAACTTGTTGGATCAGAGATACATGGATTCCACACATTGCAAGACCTCGATGTTGCGAGCATTATGGAGGAAGCAAGAACGAGATGGCTTCGTCCCAATGAGATTCATGCCATGCTTTGTAATCACAAGTATTTTACCATCAATGTCAAGCCAATGAATTTGCCTAAAAGTGGTACTATTGTATTGTTTGACCGCAAGATGCTTCGGAACTTTAGAAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGAAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATATTATGCACATGGTCTAGATAACCCAAATTTTGTTCGTAGATGTTATTGGCTGCTTGACAAGAGCCTGGAACACATCGTCCTTGTTCATTACCGTGAAACACAAGAGTTTCAGGGTTCTCCAATCACTCCCGTAAATTCAAACTCTACTACAGCCTCTGACCCATCTGCACCATGGATTCTGTCAGAAGAAATAGATTCAGGGACCAAAACTGCATATGCTGGGGAGATTAATGATAATATAACAGTCAAAAGCCATGAACTGAGGCTTCACGAGCTTAATACACTTGAATGGGATGACCTAGTCGTAGCAAACGATCTTAACACCTCTGCTGTGCCTAACGGAGGAAAAGTTCCCTATTTTGATCAACAAAATCAAATTTTACTGAATGACAGTTTTAGCAATGTAGCCAACAATGCATCTGCAGAAATTTGTACGTTCAATAATTTAACCCAGCCAATTGCAGTGAGCAATAGTATTCCATACAATTTTTCAGAAAGTGTTACTCTTCAGACAATTAGCAATCAAGGATATCGAAATGAGCAGAGGAACCATCCTGTCTCTTCAAGTGGTGTTGATTCCTTAAACACTTTGGTCAATGACAGATTGCAAAGTCAGGACAGCTTTGGAATGTGGGTGAACCAAATCATGTCTGATTCCCCTTGTTCAGTTGATGATTCTGCTCTTGGATCCTCAGTTTCATCCGTTAATGAACCATATTCATCTCTGGTAGTGGATAATCAGCAACTTTCCCTTCCAGAACAAGTATTTAATCTTACTGATGTGTCCCCTGCGTGGGTGTCTTCCACAGAGAAATCAAAGATCCTAGTGACTGGACTCTTTCATAAAGACTATCTGCACCTCCCAAAGTCCAATCTAATGTGTGTATGTGGTGATGCAAGTGTTCCTGCAGAAATTGTTCAGGATGGGGTCTACCGTTGCTGGGTACCACCGCATTCTCCGGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCATAACCCTATCAGCCAAGTTGTTACTTTTGAGTATCGTACTCCTGTTTTGCATGATCCAGTAGCTTCTATGGAAGAGAAGAACAACTGGGACGAGTTTCAACTTCAAATGAGGCTTTCTTATTTGCTCTTTGCTAAACAACAGAGTCTTGATGTCATCTCTAGTAAAGTATCACTTAGCAGACTAAAGGAGGCAAGGGAATTCTCCTTAAAGACATCATTTATTTCCAATACTTGGCAATACTTAATGAAGTCAACTTTAGACAACAAAATTCCATTTTCGCAAGCTAAAGATGCCCTGTTTGGAATTGCATTGAAAAACAGATTAAAGGAATGGCTTTCAGAAAAAATTGTTTTAGGATGCAAGACTACTGAATATGATGCGCAAGGACAAAGTGTCATCCATTTGTGTGCAATTTTGGAATATACATGGGCAATTACTTTATTTTCATGGTCAGGCTTATCGCTAGATTTCCGGGATAAATTTGGATGGACGGCTCTTCATTGGGCAGCATATTACGGCAGGGAGAAAATGGTTGCAACTTTGCTGTCAGCTGGGGCAAAGCCAAACTTGGTCACGGATCCAACTCACCAAAACCCTGGGGGATGTACTGCCGCTGATCTTGCTTATACGAGGGGTTATCATGGCTTAGCAGCTTATCTTTCGGAAAAGTCTCTAGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCACTGGAAACTAGCACGGATGATCCAGTAAATTCCGAGAACCTTACCGAGGAGCAGCTCTATGTGAAAGATACACTGGCAGCTTACCGGACAGCTGCCGATGCAGCAGCACGCATACAAGAAGCATATAGGCAGCATTCCTTAAAGTTACAAACAGAGGCGATTGAGTTTTCCAGCCCAGAAGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCATGCCTTCCGCAATTTTGAGACAAAGAAAGTGATGGTTGCTGCTGCTCGAATACAACATAGATTCCGTACATGGAAGATTCGTAGAGATTTTCTCAACATGCGCCATCAAGCTATCAAGATTCAAGCTGCTTTCAGGTGTTTTCAACAACGGAAACAATATCGTAAAATCATTTGGTCAGTTGGCGTGGTTGAGAAAGCAGTGTTGCGTTGGCGTTTAAAGAGAAAGGGCTTCCGTGGGCTCCGGCTTAATACCGAGGAAGAATCGGGAGATCAGAATCAGCAAAGTGATGCAGAGGAGGAATTCTTTCGGACTGGTAGGAAACAAGCCGAAGAACGTGTCGAGAGAAGTGTAATACGAGTGCAGGCTATGTTCCGTTCTAAGAAAGCGCAAGAAGATTATAGGAGGATGAAGTTGGCCCTTAATCAAGCAAAGCTGGAACGGGAATATGAAAAAATGCTTAGTAATGAAGTTGACATGAAAATGAAGAGGTAG
Protein sequence

>Msa1436590

MMMANNLPGQLVGSEIHGFHTLQDLDVASIMEEARTRWLRPNEIHAMLCNHKYFTINVKPMNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGLDNPNFVRRCYWLLDKSLEHIVLVHYRETQEFQGSPITPVNSNSTTASDPSAPWILSEEIDSGTKTAYAGEINDNITVKSHELRLHELNTLEWDDLVVANDLNTSAVPNGGKVPYFDQQNQILLNDSFSNVANNASAEICTFNNLTQPIAVSNSIPYNFSESVTLQTISNQGYRNEQRNHPVSSSGVDSLNTLVNDRLQSQDSFGMWVNQIMSDSPCSVDDSALGSSVSSVNEPYSSLVVDNQQLSLPEQVFNLTDVSPAWVSSTEKSKILVTGLFHKDYLHLPKSNLMCVCGDASVPAEIVQDGVYRCWVPPHSPGFVNLYLSFDGHNPISQVVTFEYRTPVLHDPVASMEEKNNWDEFQLQMRLSYLLFAKQQSLDVISSKVSLSRLKEAREFSLKTSFISNTWQYLMKSTLDNKIPFSQAKDALFGIALKNRLKEWLSEKIVLGCKTTEYDAQGQSVIHLCAILEYTWAITLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTHQNPGGCTAADLAYTRGYHGLAAYLSEKSLVEQFNDMSLAGNISGSLETSTDDPVNSENLTEEQLYVKDTLAAYRTAADAAARIQEAYRQHSLKLQTEAIEFSSPEAEARKIVAAMKIQHAFRNFETKKVMVAAARIQHRFRTWKIRRDFLNMRHQAIKIQAAFRCFQQRKQYRKIIWSVGVVEKAVLRWRLKRKGFRGLRLNTEEESGDQNQQSDAEEEFFRTGRKQAEERVERSVIRVQAMFRSKKAQEDYRRMKLALNQAKLEREYEKMLSNEVDMKMKR*