Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283810 | XP_024629611.1 | 77.419 | 1023 | 77 | 10 | 1 | 869 | 1 | 1023 | 0.0 | 1495 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283810 | sp|Q9M2L4|ACA11_ARATH | 48.206 | 1031 | 362 | 15 | 1 | 869 | 1 | 1021 | 0.0 | 893 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283810 | A0A396GLQ8 | 77.419 | 1023 | 77 | 10 | 1 | 869 | 1 | 1023 | 0.0 | 1495 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0102020 | Msa1283810 | 0.809471 | 1.861811e-50 | -8.615850e-47 |
Msa0681250 | Msa1283810 | 0.817135 | 3.857225e-52 | -8.615850e-47 |
Msa0681270 | Msa1283810 | 0.802774 | 4.783044e-49 | -8.615850e-47 |
Msa0806120 | Msa1283810 | 0.813662 | 2.285374e-51 | -8.615850e-47 |
Msa0142220 | Msa1283810 | 0.804789 | 1.825036e-49 | -8.615850e-47 |
Msa0149270 | Msa1283810 | 0.806510 | 7.943412e-50 | -8.615850e-47 |
Msa0200850 | Msa1283810 | 0.811488 | 6.827920e-51 | -8.615850e-47 |
Msa1283810 | Msa1322680 | 0.929176 | 1.011451e-92 | -8.615850e-47 |
Msa1283810 | Msa1322720 | 0.907692 | 3.849569e-81 | -8.615850e-47 |
Msa1283810 | Msa1342380 | 0.800532 | 1.378860e-48 | -8.615850e-47 |
Msa1283810 | Msa1436590 | 0.804812 | 1.805185e-49 | -8.615850e-47 |
Msa1283810 | Msa1440560 | 0.803015 | 4.265425e-49 | -8.615850e-47 |
Msa1283810 | Msa1458680 | 0.803548 | 3.307034e-49 | -8.615850e-47 |
Msa0989360 | Msa1283810 | 0.806526 | 7.882590e-50 | -8.615850e-47 |
Msa0999680 | Msa1283810 | 0.809338 | 1.988236e-50 | -8.615850e-47 |
Msa1001180 | Msa1283810 | 0.812632 | 3.845320e-51 | -8.615850e-47 |
Msa1026480 | Msa1283810 | 0.825973 | 3.499760e-54 | -8.615850e-47 |
Msa1037780 | Msa1283810 | 0.827999 | 1.146837e-54 | -8.615850e-47 |
Msa0281930 | Msa1283810 | 0.804266 | 2.345909e-49 | -8.615850e-47 |
Msa0287870 | Msa1283810 | 0.803380 | 3.584423e-49 | -8.615850e-47 |
Msa1218570 | Msa1283810 | 0.806255 | 8.989896e-50 | -8.615850e-47 |
Msa0600700 | Msa1283810 | 0.801281 | 9.694398e-49 | -8.615850e-47 |
Msa0880800 | Msa1283810 | 0.806260 | 8.967955e-50 | -8.615850e-47 |
Msa0898910 | Msa1283810 | 0.801891 | 7.269586e-49 | -8.615850e-47 |
Msa0899970 | Msa1283810 | 0.806481 | 8.054663e-50 | -8.615850e-47 |
Msa0965080 | Msa1283810 | 0.811411 | 7.095378e-51 | -8.615850e-47 |
Msa0965290 | Msa1283810 | 0.812730 | 3.660101e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283810 | MtrunA17_Chr8g0355421 | 77.419 | 1023 | 77 | 10 | 1 | 869 | 1 | 1023 | 0.0 | 1495 |
Msa1283810 | MtrunA17_Chr1g0173111 | 52.422 | 1032 | 326 | 12 | 1 | 869 | 1 | 1030 | 0.0 | 1006 |
Msa1283810 | MtrunA17_Chr8g0382071 | 52.321 | 1034 | 321 | 13 | 4 | 869 | 5 | 1034 | 0.0 | 975 |
Msa1283810 | MtrunA17_Chr5g0401211 | 43.559 | 1017 | 405 | 16 | 1 | 851 | 1 | 1014 | 0.0 | 749 |
Msa1283810 | MtrunA17_Chr3g0134771 | 42.731 | 1018 | 414 | 17 | 1 | 851 | 1 | 1016 | 0.0 | 713 |
Msa1283810 | MtrunA17_Chr4g0020551 | 46.860 | 860 | 322 | 15 | 78 | 805 | 15 | 871 | 0.0 | 700 |
Msa1283810 | MtrunA17_Chr4g0054021 | 42.583 | 937 | 380 | 12 | 72 | 851 | 2 | 937 | 0.0 | 679 |
Msa1283810 | MtrunA17_Chr2g0298871 | 34.947 | 1033 | 469 | 18 | 13 | 851 | 46 | 1069 | 2.24e-168 | 518 |
Msa1283810 | MtrunA17_Chr4g0002331 | 37.678 | 844 | 402 | 16 | 131 | 853 | 243 | 1083 | 2.55e-161 | 499 |
Msa1283810 | MtrunA17_Chr6g0456201 | 36.108 | 853 | 414 | 15 | 122 | 851 | 162 | 1006 | 8.73e-153 | 475 |
Msa1283810 | MtrunA17_Chr7g0260401 | 35.585 | 829 | 392 | 19 | 159 | 856 | 227 | 1044 | 3.84e-136 | 432 |
Msa1283810 | MtrunA17_Chr8g0340261 | 41.403 | 442 | 198 | 7 | 453 | 851 | 118 | 541 | 1.65e-100 | 323 |
Msa1283810 | MtrunA17_Chr7g0263361 | 28.822 | 628 | 324 | 17 | 237 | 744 | 231 | 855 | 2.01e-52 | 198 |
Msa1283810 | MtrunA17_Chr5g0447521 | 24.700 | 834 | 501 | 22 | 128 | 846 | 180 | 1001 | 3.77e-45 | 176 |
Msa1283810 | MtrunA17_Chr4g0005551 | 24.118 | 850 | 502 | 28 | 122 | 851 | 141 | 967 | 1.14e-43 | 171 |
Msa1283810 | MtrunA17_Chr2g0334231 | 30.388 | 464 | 246 | 10 | 11 | 398 | 54 | 516 | 5.87e-42 | 161 |
Msa1283810 | MtrunA17_Chr8g0346461 | 31.118 | 331 | 201 | 6 | 449 | 753 | 530 | 859 | 3.77e-40 | 160 |
Msa1283810 | MtrunA17_Chr8g0340271 | 36.331 | 278 | 145 | 10 | 139 | 386 | 177 | 452 | 3.65e-38 | 149 |
Msa1283810 | MtrunA17_Chr2g0334221 | 34.797 | 296 | 127 | 9 | 404 | 638 | 44 | 334 | 1.36e-36 | 141 |
Msa1283810 | MtrunA17_Chr3g0134951 | 31.250 | 320 | 206 | 8 | 449 | 757 | 508 | 824 | 4.73e-34 | 140 |
Msa1283810 | MtrunA17_Chr3g0134951 | 32.065 | 184 | 113 | 4 | 213 | 385 | 182 | 364 | 5.68e-11 | 66.6 |
Msa1283810 | MtrunA17_Chr2g0334201 | 39.759 | 166 | 66 | 1 | 722 | 853 | 1 | 166 | 3.11e-28 | 112 |
Msa1283810 | MtrunA17_Chr1g0147981 | 24.779 | 565 | 342 | 22 | 179 | 699 | 152 | 677 | 6.93e-26 | 114 |
Msa1283810 | MtrunA17_Chr4g0072131 | 23.608 | 521 | 311 | 17 | 222 | 699 | 187 | 663 | 1.57e-25 | 113 |
Msa1283810 | MtrunA17_Chr2g0298031 | 23.810 | 504 | 303 | 18 | 237 | 699 | 203 | 666 | 5.52e-25 | 112 |
Msa1283810 | MtrunA17_Chr8g0381711 | 23.379 | 586 | 389 | 17 | 203 | 743 | 167 | 737 | 9.19e-25 | 111 |
Msa1283810 | MtrunA17_Chr2g0333721 | 23.977 | 513 | 329 | 20 | 226 | 700 | 172 | 661 | 1.48e-24 | 110 |
Msa1283810 | MtrunA17_Chr8g0365021 | 24.479 | 576 | 330 | 20 | 179 | 699 | 205 | 730 | 2.05e-24 | 110 |
Msa1283810 | MtrunA17_Chr7g0276551 | 23.798 | 416 | 270 | 13 | 321 | 713 | 42 | 433 | 1.60e-23 | 106 |
Msa1283810 | MtrunA17_Chr1g0148031 | 23.896 | 498 | 309 | 19 | 237 | 699 | 198 | 660 | 3.56e-23 | 106 |
Msa1283810 | MtrunA17_Chr2g0304941 | 23.614 | 487 | 328 | 17 | 237 | 700 | 199 | 664 | 9.36e-23 | 104 |
Msa1283810 | MtrunA17_Chr3g0138931 | 23.800 | 500 | 307 | 19 | 237 | 699 | 198 | 660 | 6.49e-22 | 102 |
Msa1283810 | MtrunA17_Chr4g0059961 | 23.307 | 502 | 307 | 17 | 239 | 700 | 204 | 667 | 1.61e-21 | 100 |
Msa1283810 | MtrunA17_Chr8g0335291 | 23.140 | 484 | 333 | 14 | 237 | 700 | 206 | 670 | 2.44e-21 | 100 |
Msa1283810 | MtrunA17_Chr4g0020561 | 52.222 | 90 | 41 | 1 | 782 | 869 | 1 | 90 | 4.16e-21 | 88.6 |
Msa1283810 | MtrunA17_Chr4g0065481 | 23.364 | 642 | 399 | 26 | 179 | 774 | 136 | 730 | 4.24e-21 | 99.4 |
Msa1283810 | MtrunA17_Chr6g0452721 | 22.709 | 502 | 310 | 17 | 239 | 700 | 202 | 665 | 6.53e-20 | 95.5 |
Msa1283810 | MtrunA17_Chr4g0052521 | 24.131 | 518 | 326 | 18 | 204 | 697 | 465 | 939 | 1.27e-15 | 81.6 |
Msa1283810 | MtrunA17_Chr2g0297051 | 32.044 | 181 | 89 | 6 | 521 | 697 | 821 | 971 | 9.93e-15 | 79.0 |
Msa1283810 | MtrunA17_Chr2g0297871 | 27.083 | 240 | 128 | 11 | 520 | 751 | 356 | 556 | 1.62e-12 | 71.2 |
Msa1283810 | MtrunA17_Chr4g0020541 | 53.448 | 58 | 26 | 1 | 1 | 57 | 1 | 58 | 3.18e-12 | 62.8 |
Msa1283810 | MtrunA17_Chr8g0374331 | 31.098 | 164 | 81 | 4 | 521 | 681 | 42 | 176 | 5.71e-12 | 67.0 |
Msa1283810 | MtrunA17_Chr8g0374391 | 31.098 | 164 | 81 | 4 | 521 | 681 | 35 | 169 | 6.44e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283810 | AT3G57330.1 | 48.206 | 1031 | 362 | 15 | 1 | 869 | 1 | 1021 | 0.0 | 893 |
Msa1283810 | AT2G41560.1 | 48.206 | 1031 | 365 | 15 | 1 | 869 | 1 | 1024 | 0.0 | 887 |
Msa1283810 | AT3G57330.2 | 48.304 | 973 | 335 | 14 | 55 | 869 | 4 | 966 | 0.0 | 850 |
Msa1283810 | AT2G41560.2 | 51.469 | 851 | 303 | 11 | 123 | 869 | 78 | 922 | 0.0 | 812 |
Msa1283810 | AT2G41560.3 | 51.469 | 851 | 303 | 11 | 123 | 869 | 78 | 922 | 0.0 | 812 |
Msa1283810 | AT2G41560.4 | 51.469 | 851 | 303 | 11 | 123 | 869 | 78 | 922 | 0.0 | 812 |
Msa1283810 | AT4G37640.1 | 43.222 | 1018 | 407 | 15 | 1 | 851 | 1 | 1014 | 0.0 | 748 |
Msa1283810 | AT2G22950.1 | 42.647 | 1020 | 411 | 19 | 1 | 851 | 1 | 1015 | 0.0 | 710 |
Msa1283810 | AT1G27770.4 | 42.141 | 1018 | 421 | 17 | 1 | 851 | 1 | 1017 | 0.0 | 704 |
Msa1283810 | AT1G27770.1 | 42.141 | 1018 | 421 | 17 | 1 | 851 | 1 | 1017 | 0.0 | 704 |
Msa1283810 | AT1G27770.3 | 46.667 | 825 | 334 | 10 | 132 | 851 | 131 | 954 | 0.0 | 676 |
Msa1283810 | AT1G27770.2 | 39.877 | 973 | 433 | 18 | 1 | 851 | 1 | 943 | 0.0 | 595 |
Msa1283810 | AT4G29900.1 | 35.519 | 1022 | 467 | 21 | 13 | 851 | 37 | 1049 | 9.99e-172 | 526 |
Msa1283810 | AT4G29900.2 | 35.519 | 1022 | 467 | 21 | 13 | 851 | 37 | 1049 | 9.99e-172 | 526 |
Msa1283810 | AT5G57110.1 | 35.506 | 1028 | 467 | 20 | 8 | 851 | 32 | 1047 | 8.19e-169 | 519 |
Msa1283810 | AT5G57110.3 | 35.506 | 1028 | 467 | 20 | 8 | 851 | 32 | 1047 | 8.19e-169 | 519 |
Msa1283810 | AT5G57110.2 | 35.506 | 1028 | 467 | 20 | 8 | 851 | 32 | 1047 | 8.19e-169 | 519 |
Msa1283810 | AT3G21180.1 | 37.674 | 860 | 397 | 18 | 122 | 853 | 218 | 1066 | 1.78e-162 | 502 |
Msa1283810 | AT3G63380.1 | 35.155 | 933 | 425 | 21 | 89 | 853 | 88 | 1008 | 3.13e-151 | 471 |
Msa1283810 | AT3G22910.1 | 36.591 | 839 | 398 | 18 | 132 | 851 | 179 | 1002 | 1.35e-140 | 443 |
Msa1283810 | AT5G53010.1 | 30.238 | 840 | 422 | 23 | 128 | 841 | 234 | 1035 | 1.59e-86 | 298 |
Msa1283810 | AT5G53010.2 | 30.147 | 544 | 287 | 18 | 128 | 588 | 234 | 767 | 2.09e-51 | 194 |
Msa1283810 | AT1G07670.2 | 26.900 | 658 | 360 | 15 | 213 | 753 | 206 | 859 | 6.01e-51 | 194 |
Msa1283810 | AT1G07670.1 | 26.900 | 658 | 360 | 15 | 213 | 753 | 206 | 859 | 6.01e-51 | 194 |
Msa1283810 | AT1G07810.1 | 26.900 | 658 | 360 | 15 | 213 | 753 | 206 | 859 | 1.85e-50 | 193 |
Msa1283810 | AT1G10130.1 | 32.704 | 318 | 195 | 8 | 453 | 757 | 512 | 823 | 3.03e-40 | 160 |
Msa1283810 | AT1G10130.1 | 33.143 | 175 | 105 | 4 | 222 | 385 | 191 | 364 | 2.89e-12 | 71.2 |
Msa1283810 | AT4G00900.2 | 32.416 | 327 | 184 | 10 | 449 | 744 | 526 | 846 | 5.21e-40 | 160 |
Msa1283810 | AT4G00900.2 | 32.075 | 159 | 93 | 4 | 232 | 376 | 211 | 368 | 7.18e-13 | 73.2 |
Msa1283810 | AT4G00900.1 | 32.416 | 327 | 184 | 10 | 449 | 744 | 526 | 846 | 5.21e-40 | 160 |
Msa1283810 | AT4G00900.1 | 32.075 | 159 | 93 | 4 | 232 | 376 | 211 | 368 | 7.18e-13 | 73.2 |
Msa1283810 | AT1G17260.1 | 24.510 | 408 | 257 | 14 | 321 | 699 | 282 | 667 | 6.94e-24 | 108 |
Msa1283810 | AT4G30190.1 | 23.103 | 580 | 356 | 21 | 237 | 774 | 196 | 727 | 3.19e-23 | 106 |
Msa1283810 | AT1G80660.1 | 21.589 | 491 | 333 | 15 | 237 | 700 | 201 | 666 | 1.82e-22 | 104 |
Msa1283810 | AT1G80660.2 | 21.589 | 491 | 333 | 15 | 237 | 700 | 72 | 537 | 1.86e-22 | 103 |
Msa1283810 | AT1G80660.3 | 21.589 | 491 | 333 | 15 | 237 | 700 | 201 | 666 | 2.31e-22 | 103 |
Msa1283810 | AT1G80660.4 | 21.589 | 491 | 333 | 15 | 237 | 700 | 201 | 666 | 2.44e-22 | 103 |
Msa1283810 | AT2G24520.3 | 23.669 | 507 | 328 | 20 | 222 | 699 | 164 | 640 | 6.69e-22 | 102 |
Msa1283810 | AT2G24520.1 | 23.669 | 507 | 328 | 20 | 222 | 699 | 164 | 640 | 6.69e-22 | 102 |
Msa1283810 | AT2G18960.3 | 22.798 | 579 | 359 | 20 | 237 | 774 | 132 | 663 | 6.96e-22 | 102 |
Msa1283810 | AT2G18960.2 | 22.798 | 579 | 359 | 20 | 237 | 774 | 132 | 663 | 6.96e-22 | 102 |
Msa1283810 | AT2G18960.1 | 22.798 | 579 | 359 | 20 | 237 | 774 | 196 | 727 | 7.15e-22 | 102 |
Msa1283810 | AT2G24520.2 | 23.669 | 507 | 328 | 20 | 222 | 699 | 227 | 703 | 8.09e-22 | 102 |
Msa1283810 | AT5G57350.4 | 23.246 | 499 | 311 | 18 | 237 | 699 | 197 | 659 | 2.55e-21 | 100 |
Msa1283810 | AT5G57350.2 | 23.246 | 499 | 311 | 18 | 237 | 699 | 197 | 659 | 2.55e-21 | 100 |
Msa1283810 | AT5G57350.1 | 23.246 | 499 | 311 | 18 | 237 | 699 | 197 | 659 | 2.55e-21 | 100 |
Msa1283810 | AT5G62670.1 | 21.912 | 502 | 314 | 16 | 239 | 700 | 202 | 665 | 5.85e-21 | 99.4 |
Msa1283810 | AT2G24520.4 | 23.573 | 403 | 266 | 14 | 321 | 699 | 13 | 397 | 9.87e-21 | 98.2 |
Msa1283810 | AT3G47950.1 | 22.664 | 503 | 309 | 18 | 239 | 700 | 206 | 669 | 1.11e-20 | 98.6 |
Msa1283810 | AT3G47950.2 | 22.664 | 503 | 309 | 18 | 239 | 700 | 206 | 669 | 1.11e-20 | 98.6 |
Msa1283810 | AT3G60330.2 | 23.146 | 553 | 367 | 17 | 179 | 700 | 136 | 661 | 2.02e-20 | 97.8 |
Msa1283810 | AT3G60330.1 | 23.146 | 553 | 367 | 17 | 179 | 700 | 136 | 661 | 2.02e-20 | 97.8 |
Msa1283810 | AT2G07560.1 | 21.573 | 496 | 326 | 14 | 237 | 700 | 199 | 663 | 2.72e-20 | 97.4 |
Msa1283810 | AT5G57350.3 | 22.683 | 410 | 261 | 13 | 321 | 699 | 13 | 397 | 5.30e-20 | 95.9 |
Msa1283810 | AT3G60330.4 | 22.966 | 553 | 368 | 17 | 179 | 700 | 136 | 661 | 7.43e-20 | 95.9 |
Msa1283810 | AT3G60330.3 | 22.966 | 553 | 368 | 17 | 179 | 700 | 136 | 661 | 7.43e-20 | 95.9 |
Msa1283810 | AT3G42640.1 | 21.116 | 502 | 322 | 15 | 237 | 700 | 199 | 664 | 2.25e-18 | 90.9 |
Msa1283810 | AT5G44790.1 | 22.945 | 523 | 316 | 17 | 222 | 715 | 497 | 961 | 8.45e-15 | 79.7 |
Msa1283810 | AT4G30110.1 | 30.332 | 211 | 105 | 8 | 518 | 724 | 508 | 680 | 2.42e-13 | 74.7 |
Msa1283810 | AT4G30110.2 | 30.332 | 211 | 105 | 8 | 518 | 724 | 508 | 680 | 2.42e-13 | 74.7 |
Find 207 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATTTCGGAAGCATTATTT+TGG | 0.162724 | 8_3:-25509750 | None:intergenic |
GATTCAGCATTGTTGGAATT+TGG | 0.197819 | 8_3:+25509817 | Msa1283810:CDS |
GGTGAGGTTGTTGCGGTTAC+TGG | 0.202382 | 8_3:+25510558 | Msa1283810:CDS |
TTCAATGGTTAAACCATTAT+TGG | 0.219739 | 8_3:-25510331 | None:intergenic |
CTTTGATTCAAAGAGAAATT+TGG | 0.225414 | 8_3:+25513127 | Msa1283810:three_prime_UTR |
ATCAGTGTATAGCCATTATC+AGG | 0.254832 | 8_3:-25510162 | None:intergenic |
TCTGAAAGACTTCGAATTAG+AGG | 0.256876 | 8_3:+25507117 | Msa1283810:CDS |
ATATCAAGTTATTGTCCTTA+TGG | 0.257926 | 8_3:+25511909 | Msa1283810:CDS |
TTGGAATTTGGCTTGCTGTT+GGG | 0.262270 | 8_3:+25509829 | Msa1283810:CDS |
GCTTTGGGTCAACTTGATTA+TGG | 0.279614 | 8_3:+25511759 | Msa1283810:CDS |
CACACAATTCAGGAAGAATA+TGG | 0.295705 | 8_3:+25512706 | Msa1283810:three_prime_UTR |
CCACGTATCATATTCATCTT+TGG | 0.299363 | 8_3:+25512773 | Msa1283810:three_prime_UTR |
GACATTGTTCATTTGTCAAT+TGG | 0.314846 | 8_3:+25509010 | Msa1283810:CDS |
TAACAGCTGTGCAGTTGCTT+TGG | 0.320705 | 8_3:+25511743 | Msa1283810:CDS |
TTGCGAGATCCTCTGCATTT+CGG | 0.324738 | 8_3:-25507216 | None:intergenic |
AGTTTCCTTTCGCGGAATAT+TGG | 0.327255 | 8_3:+25512804 | Msa1283810:three_prime_UTR |
TTGTTTATCCTTAACCATTT+CGG | 0.327461 | 8_3:-25509764 | None:intergenic |
GTCAATAAACTATGGATATC+TGG | 0.329156 | 8_3:+25509634 | Msa1283810:CDS |
GAACTTGTCTACAATGGATA+TGG | 0.330173 | 8_3:+25510368 | Msa1283810:CDS |
AACAGCTGTGCAGTTGCTTT+GGG | 0.332787 | 8_3:+25511744 | Msa1283810:CDS |
CGAAAAGTTTAACAAATGAT+AGG | 0.337177 | 8_3:+25509515 | Msa1283810:CDS |
TGGAATTTGGCTTGCTGTTG+GGG | 0.340097 | 8_3:+25509830 | Msa1283810:CDS |
GGAGTTGCCATGGGATTATC+AGG | 0.341427 | 8_3:+25510624 | Msa1283810:CDS |
CCATTGAAGGACAACAATTT+CGG | 0.343261 | 8_3:+25510346 | Msa1283810:CDS |
GAAAACAACATCCCTGATAA+TGG | 0.343419 | 8_3:+25510150 | Msa1283810:CDS |
GGTGGAGGAAACGCCATTAC+AGG | 0.349939 | 8_3:+25509252 | Msa1283810:CDS |
CTGCATTTCGGAACCTTCTA+CGG | 0.354695 | 8_3:-25507204 | None:intergenic |
ACATTGTTCATTTGTCAATT+GGG | 0.356910 | 8_3:+25509011 | Msa1283810:CDS |
TTGTGGAGATGAAAGATAAT+AGG | 0.363721 | 8_3:+25509662 | Msa1283810:CDS |
TCCAACAGATTCAGCATTGT+TGG | 0.368984 | 8_3:+25509810 | Msa1283810:CDS |
CCGAAATTGTTGTCCTTCAA+TGG | 0.371993 | 8_3:-25510346 | None:intergenic |
TATACACTGATAGCCATTCT+AGG | 0.381451 | 8_3:+25510174 | Msa1283810:CDS |
CGCAGAACTTCAATGATTGA+TGG | 0.382720 | 8_3:-25508898 | None:intergenic |
TGTGGTATACTCACCAATAA+TGG | 0.385351 | 8_3:+25510318 | Msa1283810:CDS |
CCAAAATAATGCTTCCGAAA+TGG | 0.387368 | 8_3:+25509750 | Msa1283810:CDS |
ACAAGAGATGCAATTGAATC+TGG | 0.388276 | 8_3:-25508536 | None:intergenic |
GAACAAGAACATTTCAGTTA+AGG | 0.389176 | 8_3:+25508934 | Msa1283810:CDS |
AACAAATACAGGGAAAGCTT+CGG | 0.389858 | 8_3:+25508297 | Msa1283810:intron |
CTCCTTGAAGTTTCCTTTCG+CGG | 0.390720 | 8_3:+25512796 | Msa1283810:three_prime_UTR |
AACAGCCATTATTGTTGCTC+TGG | 0.393158 | 8_3:+25511607 | Msa1283810:CDS |
TTTATTGACCACCATGCAAT+TGG | 0.395223 | 8_3:-25509620 | None:intergenic |
CCATAGCTAGCACACAATTC+AGG | 0.395773 | 8_3:+25512696 | Msa1283810:exon |
AGTTGAAAGAAAAGTCAGTT+TGG | 0.396304 | 8_3:+25507052 | Msa1283810:five_prime_UTR |
GCATGGTGGTCAATAAACTA+TGG | 0.398688 | 8_3:+25509626 | Msa1283810:CDS |
TCGGGAACCAAAGTGATAGA+TGG | 0.398940 | 8_3:+25509151 | Msa1283810:CDS |
CCGTTCAGTTTCACCTGTAA+TGG | 0.400443 | 8_3:-25509265 | None:intergenic |
TAATGCTTCCGAAATGGTTA+AGG | 0.411681 | 8_3:+25509756 | Msa1283810:CDS |
CAATAACTTGATATATGCTT+TGG | 0.414253 | 8_3:-25511900 | None:intergenic |
TATGTTGAAGTGCATGTTGA+TGG | 0.415403 | 8_3:+25508500 | Msa1283810:CDS |
CATGAAGTCAACGCATCGTT+TGG | 0.416704 | 8_3:-25507004 | None:intergenic |
TTTATTTCTGCTTCTGTCAC+AGG | 0.417306 | 8_3:+25511638 | Msa1283810:CDS |
TTTCACGATATTGCTATTGC+TGG | 0.423171 | 8_3:+25508353 | Msa1283810:CDS |
AACGGAGTTGCTACTATTGT+TGG | 0.425293 | 8_3:+25509283 | Msa1283810:CDS |
GTTGGAATTTGGCTTGCTGT+TGG | 0.425604 | 8_3:+25509828 | Msa1283810:CDS |
ACGGCCAATGGTAAACCTTC+TGG | 0.425748 | 8_3:-25509469 | None:intergenic |
ACAAATACAGGGAAAGCTTC+GGG | 0.425941 | 8_3:+25508298 | Msa1283810:intron |
CTCTTTGAATCAAAGTTACA+AGG | 0.428178 | 8_3:-25513119 | None:intergenic |
TATTGTCAATATTATCAAAT+GGG | 0.430176 | 8_3:+25511538 | Msa1283810:CDS |
CTATTGTCAATATTATCAAA+TGG | 0.432147 | 8_3:+25511537 | Msa1283810:CDS |
ACATGCACTTCAACATAATC+AGG | 0.433146 | 8_3:-25508494 | None:intergenic |
TGCATTTCGGAACCTTCTAC+GGG | 0.442840 | 8_3:-25507203 | None:intergenic |
TATTCGCCGTGACGGTTACC+AGG | 0.442870 | 8_3:+25512659 | Msa1283810:CDS |
TTCATAAGTTCATCGTTAAG+TGG | 0.443590 | 8_3:-25511814 | None:intergenic |
AGACTTCGAATTAGAGGATA+AGG | 0.443794 | 8_3:+25507123 | Msa1283810:CDS |
GATCACCAGAGCAACAATAA+TGG | 0.446023 | 8_3:-25511612 | None:intergenic |
AATAATGGTTTAACCATTGA+AGG | 0.446573 | 8_3:+25510333 | Msa1283810:CDS |
TCTTCTTACATTAGCTGTGT+TGG | 0.454285 | 8_3:+25509327 | Msa1283810:intron |
AAAAGTATATGAAGGTTATG+TGG | 0.454735 | 8_3:-25513005 | None:intergenic |
TTGGTTCCCGAAAGTAGAAA+AGG | 0.455301 | 8_3:-25509139 | None:intergenic |
ATTGAGAGACTACACTGATC+TGG | 0.459351 | 8_3:+25507077 | Msa1283810:five_prime_UTR |
TTGGAGAAGCGCCGTCTCGC+TGG | 0.462145 | 8_3:+25507171 | Msa1283810:CDS |
GTAATCATTGTGCAGTTCCT+TGG | 0.465684 | 8_3:+25512516 | Msa1283810:CDS |
ATCATTGAAGTTCTGCGAAT+GGG | 0.468883 | 8_3:+25508904 | Msa1283810:CDS |
TGGTGAAGAATCCCCGTAGA+AGG | 0.469444 | 8_3:+25507191 | Msa1283810:CDS |
TCAACTTTCATTCAATGTCA+TGG | 0.471388 | 8_3:-25507035 | None:intergenic |
AGGATCATTGATTCCTAGAA+TGG | 0.472659 | 8_3:-25510187 | None:intergenic |
TCCAACAATGCTGAATCTGT+TGG | 0.477694 | 8_3:-25509811 | None:intergenic |
CCCCGACCCATCTATCACTT+TGG | 0.478611 | 8_3:-25509158 | None:intergenic |
CCTGAATTGTGTGCTAGCTA+TGG | 0.479391 | 8_3:-25512696 | None:intergenic |
TCAGTTAAGGTCACACGAGA+TGG | 0.480503 | 8_3:+25508947 | Msa1283810:CDS |
TTTGAATGACGTAGGGGTGG+AGG | 0.483232 | 8_3:+25509237 | Msa1283810:CDS |
CTGTACAGTGCCTCTGAACT+TGG | 0.485411 | 8_3:+25512548 | Msa1283810:CDS |
CATTGTTCATTTGTCAATTG+GGG | 0.486132 | 8_3:+25509012 | Msa1283810:CDS |
CTGTTGGCATGAGGACTGAA+TGG | 0.488590 | 8_3:+25509197 | Msa1283810:CDS |
GGCTCACTGACAAGAGCTAA+AGG | 0.491072 | 8_3:-25511793 | None:intergenic |
CTTTCTGCATGTGAAGCAAT+GGG | 0.493063 | 8_3:+25509553 | Msa1283810:CDS |
GTAACCATTGCCATGGTCAC+TGG | 0.494913 | 8_3:+25510258 | Msa1283810:CDS |
CTTCGTGTCTCAGTGGCAGC+TGG | 0.494916 | 8_3:+25508620 | Msa1283810:CDS |
AAAGTATATGAAGGTTATGT+GGG | 0.501423 | 8_3:-25513004 | None:intergenic |
GTGAAGAGTCGTTGATGCGT+TGG | 0.502714 | 8_3:+25507152 | Msa1283810:CDS |
ACCAAAGTGATAGATGGGTC+GGG | 0.504380 | 8_3:+25509157 | Msa1283810:CDS |
CACCGATCATGACATGATAC+AGG | 0.504920 | 8_3:-25512846 | None:intergenic |
TCTTTGACACCAAGGCGTAT+AGG | 0.504928 | 8_3:-25510207 | None:intergenic |
AGCAACTGCACAGCTGTTAG+CGG | 0.505639 | 8_3:-25511739 | None:intergenic |
GGAATTTGGCTTGCTGTTGG+GGG | 0.506773 | 8_3:+25509831 | Msa1283810:CDS |
TCTTTCTGCATGTGAAGCAA+TGG | 0.508859 | 8_3:+25509552 | Msa1283810:CDS |
GAATTTGGCTTGCTGTTGGG+GGG | 0.509071 | 8_3:+25509832 | Msa1283810:CDS |
TTTGATAGTATTCACGGTGA+TGG | 0.512121 | 8_3:+25513092 | Msa1283810:three_prime_UTR |
AGGTTAAGTGTCACGGCCAA+TGG | 0.512800 | 8_3:-25509481 | None:intergenic |
ATTGACCACCATGCAATTGG+AGG | 0.513485 | 8_3:-25509617 | None:intergenic |
GTTGTTGCGGTTACTGGTGA+TGG | 0.513631 | 8_3:+25510564 | Msa1283810:CDS |
GGTGGAAAATTTGCCACTGA+AGG | 0.513938 | 8_3:+25508794 | Msa1283810:intron |
ATGTGTGCCTCATGCAGTGC+AGG | 0.514389 | 8_3:-25510600 | None:intergenic |
ATCAATGATCCTATACGCCT+TGG | 0.518802 | 8_3:+25510198 | Msa1283810:CDS |
TTCCGCGAAAGGAAACTTCA+AGG | 0.518985 | 8_3:-25512798 | None:intergenic |
TGGTTCCCGAAAGTAGAAAA+GGG | 0.521833 | 8_3:-25509138 | None:intergenic |
AATTTCACAAGGGAGTTATG+TGG | 0.521978 | 8_3:+25512906 | Msa1283810:three_prime_UTR |
TGCCCTATTACAAGAAAAGC+AGG | 0.524477 | 8_3:+25507243 | Msa1283810:CDS |
GCTTATCTGAAGGATATGTT+TGG | 0.526629 | 8_3:+25510537 | Msa1283810:CDS |
TGTTGGCATGAGGACTGAAT+GGG | 0.530670 | 8_3:+25509198 | Msa1283810:CDS |
GCAACTGCACAGCTGTTAGC+GGG | 0.531543 | 8_3:-25511738 | None:intergenic |
CAAGTTCAGAGGCACTGTAC+AGG | 0.534169 | 8_3:-25512547 | None:intergenic |
GAGATGAAAGATAATAGGAA+TGG | 0.535453 | 8_3:+25509667 | Msa1283810:CDS |
GCTCACTGACAAGAGCTAAA+GGG | 0.535956 | 8_3:-25511792 | None:intergenic |
TGTTGGAGTTCCCAATATTG+TGG | 0.537381 | 8_3:-25509794 | None:intergenic |
TGCCTCTGAACTTGGAACTC+TGG | 0.541371 | 8_3:+25512556 | Msa1283810:CDS |
GGCACACATTGGAGTTGCCA+TGG | 0.542531 | 8_3:+25510614 | Msa1283810:CDS |
GTTCATAACTATGATAGCAA+TGG | 0.544053 | 8_3:+25508557 | Msa1283810:CDS |
ATGGATATCTGGAGAAGTTG+TGG | 0.545213 | 8_3:+25509645 | Msa1283810:CDS |
GGGGATCAAATACCTGCTGA+TGG | 0.545891 | 8_3:+25509031 | Msa1283810:CDS |
TGTTCCAGAAGGTTTACCAT+TGG | 0.546447 | 8_3:+25509465 | Msa1283810:CDS |
TACAAAACAAAAGTATATGA+AGG | 0.547654 | 8_3:-25513013 | None:intergenic |
TGTGCTAGCTATGGTTGTGC+AGG | 0.550993 | 8_3:-25512687 | None:intergenic |
AACCAAAGTGATAGATGGGT+CGG | 0.551546 | 8_3:+25509156 | Msa1283810:CDS |
TGAAGAGGCCTCCAGTTGGA+AGG | 0.551685 | 8_3:+25511833 | Msa1283810:CDS |
CAAGATCGACATTCTTCGCA+TGG | 0.552524 | 8_3:-25510053 | None:intergenic |
CAGTTAAGGTCACACGAGAT+GGG | 0.552624 | 8_3:+25508948 | Msa1283810:CDS |
GAAAAGTTTAACAAATGATA+GGG | 0.552935 | 8_3:+25509516 | Msa1283810:CDS |
GTTCAAACTTGTATAGCAGC+AGG | 0.552990 | 8_3:+25510234 | Msa1283810:CDS |
AGGAATGGAAATAAACTGAA+AGG | 0.555817 | 8_3:+25509682 | Msa1283810:CDS |
CTCCATTGTAGCTTATCTGA+AGG | 0.557183 | 8_3:+25510527 | Msa1283810:CDS |
ATAGTCATTGCTGTTCCAGA+AGG | 0.561808 | 8_3:+25509454 | Msa1283810:CDS |
GCACACATTGGAGTTGCCAT+GGG | 0.563678 | 8_3:+25510615 | Msa1283810:CDS |
GATGAGGTGGGTATTATACT+TGG | 0.565203 | 8_3:+25508836 | Msa1283810:CDS |
AATCATTGAAGTTCTGCGAA+TGG | 0.567295 | 8_3:+25508903 | Msa1283810:CDS |
GAAGAGGCCTCCAGTTGGAA+GGG | 0.567609 | 8_3:+25511834 | Msa1283810:CDS |
GTGGAAAATTTGCCACTGAA+GGG | 0.568868 | 8_3:+25508795 | Msa1283810:CDS |
CGGGAACCAAAGTGATAGAT+GGG | 0.569519 | 8_3:+25509152 | Msa1283810:CDS |
TCGATGCAAATCCCATCAGC+AGG | 0.570040 | 8_3:-25509043 | None:intergenic |
TGATGCCAATATTCCGCGAA+AGG | 0.572855 | 8_3:-25512809 | None:intergenic |
ATCGCCAGTGACCATGGCAA+TGG | 0.574928 | 8_3:-25510262 | None:intergenic |
ATTTCGGAACTTGTCTACAA+TGG | 0.575444 | 8_3:+25510362 | Msa1283810:CDS |
CTCTGTGCCTGATAATCCCA+TGG | 0.576412 | 8_3:-25510631 | None:intergenic |
AATAGTTCTCAAAGGTTCAG+AGG | 0.578252 | 8_3:-25510091 | None:intergenic |
AAGAGGCCTCCAGTTGGAAG+GGG | 0.580347 | 8_3:+25511835 | Msa1283810:CDS |
GCGATGATATGAATATAGCT+AGG | 0.580986 | 8_3:+25510280 | Msa1283810:CDS |
ATGGAGTTGAAGGCATTGCA+AGG | 0.582724 | 8_3:+25508594 | Msa1283810:CDS |
AGTAAATGTGTATGATGAGG+TGG | 0.583365 | 8_3:+25508823 | Msa1283810:CDS |
TGAATACTATCAAAATGTGG+AGG | 0.584575 | 8_3:-25513083 | None:intergenic |
ATGGTTGTGCAGGAAGTGCC+TGG | 0.586165 | 8_3:-25512677 | None:intergenic |
TTTCTTGATTTACATAAACT+GGG | 0.587025 | 8_3:-25509114 | None:intergenic |
CTTGTCTACAATGGATATGG+AGG | 0.588012 | 8_3:+25510371 | Msa1283810:CDS |
AGGACTATTGCTACAGAATG+TGG | 0.588492 | 8_3:+25510300 | Msa1283810:CDS |
TTAACGATGAACTTATGAAG+AGG | 0.591899 | 8_3:+25511818 | Msa1283810:CDS |
CATATCATCGCCAGTGACCA+TGG | 0.591987 | 8_3:-25510268 | None:intergenic |
CCAAAGTGATAGATGGGTCG+GGG | 0.592827 | 8_3:+25509158 | Msa1283810:CDS |
TCGAATTAGAGGATAAGGAT+CGG | 0.594719 | 8_3:+25507128 | Msa1283810:CDS |
GCTAAAGAAATAGTTCTCAA+AGG | 0.597281 | 8_3:-25510099 | None:intergenic |
GACAGTGACCTCCAATTGCA+TGG | 0.597486 | 8_3:+25509609 | Msa1283810:CDS |
TGGTTGACATGACTTAGAAG+TGG | 0.598065 | 8_3:-25506984 | None:intergenic |
GAATACTATCAAAATGTGGA+GGG | 0.599346 | 8_3:-25513082 | None:intergenic |
TACCTGTATCATGTCATGAT+CGG | 0.602775 | 8_3:+25512844 | Msa1283810:three_prime_UTR |
GGGATCAAATACCTGCTGAT+GGG | 0.603685 | 8_3:+25509032 | Msa1283810:CDS |
ATTTACTAGCAACCCTTCAG+TGG | 0.605264 | 8_3:-25508807 | None:intergenic |
ATCATGACATGATACAGGTA+AGG | 0.606248 | 8_3:-25512841 | None:intergenic |
ATCCTTCAGATAAGCTACAA+TGG | 0.609602 | 8_3:-25510529 | None:intergenic |
TCTCATGTTGTAATTTCACA+AGG | 0.609869 | 8_3:+25512895 | Msa1283810:three_prime_UTR |
TGATGCTCCTGCACTGCATG+AGG | 0.610642 | 8_3:+25510593 | Msa1283810:CDS |
GATGTAAGTATTCGCCGTGA+CGG | 0.610700 | 8_3:+25512651 | Msa1283810:CDS |
TGACAAGAGCTAAAGGGCAG+AGG | 0.610855 | 8_3:-25511786 | None:intergenic |
AGCAGGAGTAACCATTGCCA+TGG | 0.610945 | 8_3:+25510251 | Msa1283810:CDS |
AAATGTGGAGGGAACTTCTG+AGG | 0.611297 | 8_3:-25513071 | None:intergenic |
AACCAGAGTTCCAAGTTCAG+AGG | 0.612528 | 8_3:-25512558 | None:intergenic |
CTTATGAAGAGGCCTCCAGT+TGG | 0.613832 | 8_3:+25511829 | Msa1283810:CDS |
AAAAGCAAGGTTAAGTGTCA+CGG | 0.614563 | 8_3:-25509488 | None:intergenic |
GCACTGCATGAGGCACACAT+TGG | 0.614582 | 8_3:+25510603 | Msa1283810:CDS |
CCATTACAGGTGAAACTGAA+CGG | 0.619108 | 8_3:+25509265 | Msa1283810:CDS |
AAGATGCTAGTGGCAGCTGT+TGG | 0.620189 | 8_3:+25509181 | Msa1283810:CDS |
TATGTTTGGTGAGGTTGTTG+CGG | 0.630527 | 8_3:+25510551 | Msa1283810:CDS |
CCGTGAATACTATCAAAATG+TGG | 0.631125 | 8_3:-25513086 | None:intergenic |
TCTGAAGGATATGTTTGGTG+AGG | 0.638884 | 8_3:+25510542 | Msa1283810:CDS |
CTCATGTTGTAATTTCACAA+GGG | 0.639942 | 8_3:+25512896 | Msa1283810:three_prime_UTR |
GTAAATGTGTATGATGAGGT+GGG | 0.640086 | 8_3:+25508824 | Msa1283810:CDS |
ATTGTCAATATTATCAAATG+GGG | 0.641772 | 8_3:+25511539 | Msa1283810:CDS |
CTGTACAGGCAAAATTGCCA+AGG | 0.645627 | 8_3:-25512533 | None:intergenic |
GGGATTCTTCACCAGCGAGA+CGG | 0.646880 | 8_3:-25507182 | None:intergenic |
TATTATCAAATGGGGACGTG+CGG | 0.647774 | 8_3:+25511547 | Msa1283810:CDS |
TTATCACGAATGCCATGTGG+AGG | 0.649611 | 8_3:+25511866 | Msa1283810:CDS |
TGGAGTGTTTGTCATGTGGT+AGG | 0.650498 | 8_3:-25510509 | None:intergenic |
GCTAGTAAATGTGTATGATG+AGG | 0.652202 | 8_3:+25508820 | Msa1283810:CDS |
GAAGTGCCTGGTAACCGTCA+CGG | 0.653328 | 8_3:-25512665 | None:intergenic |
TCAGTGTATAGCCATTATCA+GGG | 0.658211 | 8_3:-25510161 | None:intergenic |
CCAAAGATGAATATGATACG+TGG | 0.658978 | 8_3:-25512773 | None:intergenic |
TAGTGGCAGCTGTTGGCATG+AGG | 0.660093 | 8_3:+25509188 | Msa1283810:CDS |
TAGAAGGTTCCGAAATGCAG+AGG | 0.662812 | 8_3:+25507207 | Msa1283810:CDS |
ACTTTCATTCAATGTCATGG+AGG | 0.670936 | 8_3:-25507032 | None:intergenic |
CATGGGATTATCAGGCACAG+AGG | 0.681497 | 8_3:+25510632 | Msa1283810:CDS |
CTTGTGTATAAAGCAACTCG+CGG | 0.683672 | 8_3:+25509361 | Msa1283810:CDS |
AAGGAAACTTCGTGTCTCAG+TGG | 0.687735 | 8_3:+25508613 | Msa1283810:CDS |
TGGGTCGGGGAAGATGCTAG+TGG | 0.690747 | 8_3:+25509171 | Msa1283810:CDS |
CAAATGATAGGGCACTCGTG+AGG | 0.700836 | 8_3:+25509527 | Msa1283810:CDS |
AATTTATCACGAATGCCATG+TGG | 0.704554 | 8_3:+25511863 | Msa1283810:CDS |
ACAATGGAGTGTTTGTCATG+TGG | 0.709053 | 8_3:-25510513 | None:intergenic |
GCATTTCGGAACCTTCTACG+GGG | 0.712804 | 8_3:-25507202 | None:intergenic |
GTTGGCATGAGGACTGAATG+GGG | 0.732375 | 8_3:+25509199 | Msa1283810:CDS |
GAAATGGTTAAGGATAAACA+AGG | 0.742289 | 8_3:+25509766 | Msa1283810:CDS |
AGTGACCTCCAATTGCATGG+TGG | 0.754752 | 8_3:+25509612 | Msa1283810:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATGTAAAAAATGCAA+AGG | + | chr8_3:25507622-25507641 | Msa1283810:intron | 15.0% |
!! | AAAAATGTAAAAAATGCAAA+GGG | + | chr8_3:25507623-25507642 | Msa1283810:intron | 15.0% |
!!! | GAAATTTTAAAATCAAATGA+TGG | - | chr8_3:25507870-25507889 | None:intergenic | 15.0% |
!! | AAAATTTCTTAGTTTAAATG+AGG | + | chr8_3:25507882-25507901 | Msa1283810:intron | 15.0% |
!!! | ATATTTATTTCTACTTGTTA+AGG | - | chr8_3:25508005-25508024 | None:intergenic | 15.0% |
!! | AACAAGTAGAAATAAATATA+AGG | + | chr8_3:25508006-25508025 | Msa1283810:intron | 15.0% |
!! | AAAAATATACAATTCGATTA+TGG | + | chr8_3:25508107-25508126 | Msa1283810:intron | 15.0% |
!! | AAAATATACAATTCGATTAT+GGG | + | chr8_3:25508108-25508127 | Msa1283810:intron | 15.0% |
!! | AATGGTTTCAAAAAAATTAA+TGG | + | chr8_3:25508575-25508594 | Msa1283810:CDS | 15.0% |
!! | TAAAAGTAAAAACTATAGTA+TGG | - | chr8_3:25511202-25511221 | None:intergenic | 15.0% |
!! | ATATGAATATAAACTAAATC+TGG | - | chr8_3:25511323-25511342 | None:intergenic | 15.0% |
!!! | AAATGCTGATATAATTTTAA+TGG | + | chr8_3:25511499-25511518 | Msa1283810:CDS | 15.0% |
!! | TATTGTCAATATTATCAAAT+GGG | + | chr8_3:25511538-25511557 | Msa1283810:CDS | 15.0% |
!! | GGACAAAAATAAAATCAAAT+GGG | - | chr8_3:25507416-25507435 | None:intergenic | 20.0% |
!! | TATTAATTAGGGATATGTTT+AGG | - | chr8_3:25507487-25507506 | None:intergenic | 20.0% |
!! | CAAGTTAGTAGTATTAATTA+GGG | - | chr8_3:25507498-25507517 | None:intergenic | 20.0% |
!! | ACAAGTTAGTAGTATTAATT+AGG | - | chr8_3:25507499-25507518 | None:intergenic | 20.0% |
!! | TTTAATACACATACAAACAA+AGG | + | chr8_3:25507540-25507559 | Msa1283810:intron | 20.0% |
!! | AAAATGTAAAAAATGCAAAG+GGG | + | chr8_3:25507624-25507643 | Msa1283810:intron | 20.0% |
!! | CATTAATCAAATGATCAAAT+TGG | - | chr8_3:25508263-25508282 | None:intergenic | 20.0% |
!! | AAAAAAATTAATGGAGTTGA+AGG | + | chr8_3:25508584-25508603 | Msa1283810:CDS | 20.0% |
!!! | AACCTTTTATTAAATTTGTG+TGG | + | chr8_3:25508714-25508733 | Msa1283810:intron | 20.0% |
!!! | ACCTTTTATTAAATTTGTGT+GGG | + | chr8_3:25508715-25508734 | Msa1283810:intron | 20.0% |
!! | TTTCTTGATTTACATAAACT+GGG | - | chr8_3:25509117-25509136 | None:intergenic | 20.0% |
!!! | TTTTCTTGATTTACATAAAC+TGG | - | chr8_3:25509118-25509137 | None:intergenic | 20.0% |
!! | GAAAAGTTTAACAAATGATA+GGG | + | chr8_3:25509516-25509535 | Msa1283810:CDS | 20.0% |
!! | TTTATCTAAGCAAATATAAC+TGG | - | chr8_3:25509584-25509603 | None:intergenic | 20.0% |
!! | TATATTTGCTTAGATAAAAC+AGG | + | chr8_3:25509586-25509605 | Msa1283810:intron | 20.0% |
!! | ATATTTGCTTAGATAAAACA+GGG | + | chr8_3:25509587-25509606 | Msa1283810:intron | 20.0% |
!!! | GTTTTTACTTTTATAGTTCA+CGG | + | chr8_3:25511209-25511228 | Msa1283810:intron | 20.0% |
!!! | TTTTTACTTTTATAGTTCAC+GGG | + | chr8_3:25511210-25511229 | Msa1283810:intron | 20.0% |
!! | ATATTCATATTCATATCCAA+TGG | + | chr8_3:25511333-25511352 | Msa1283810:intron | 20.0% |
!!! | AGCAGAAATGTTTTATTTAT+AGG | - | chr8_3:25511434-25511453 | None:intergenic | 20.0% |
!!! | AATTATATCAGCATTTTCTT+TGG | - | chr8_3:25511495-25511514 | None:intergenic | 20.0% |
!! | CTATTGTCAATATTATCAAA+TGG | + | chr8_3:25511537-25511556 | Msa1283810:CDS | 20.0% |
!! | ATTGTCAATATTATCAAATG+GGG | + | chr8_3:25511539-25511558 | Msa1283810:CDS | 20.0% |
!!! | TTATGGTTCTTAATTTTCAA+GGG | + | chr8_3:25511926-25511945 | Msa1283810:intron | 20.0% |
!! | TAAGCTAAAATCAAAATTCA+TGG | - | chr8_3:25512058-25512077 | None:intergenic | 20.0% |
!!! | TTTTTTACATTGTTGATGAA+TGG | - | chr8_3:25512112-25512131 | None:intergenic | 20.0% |
!!! | TGTAAAAAAGTTTTAACTAG+AGG | + | chr8_3:25512123-25512142 | Msa1283810:intron | 20.0% |
!!! | TGGTTAATTAGTGTTTTAAT+TGG | + | chr8_3:25512576-25512595 | Msa1283810:CDS | 20.0% |
!!! | TACTTACATCTTTTTCAATT+GGG | - | chr8_3:25512641-25512660 | None:intergenic | 20.0% |
!!! | ATACTTACATCTTTTTCAAT+TGG | - | chr8_3:25512642-25512661 | None:intergenic | 20.0% |
!! | AATCAAATAAAAAGAACAAG+CGG | - | chr8_3:25512946-25512965 | None:intergenic | 20.0% |
!!! | TACAAAACAAAAGTATATGA+AGG | - | chr8_3:25513016-25513035 | None:intergenic | 20.0% |
!! | TTAGAGATTAACTTGATCAA+AGG | - | chr8_3:25507334-25507353 | None:intergenic | 25.0% |
! | CAAAAATAAAATCAAATGGG+TGG | - | chr8_3:25507413-25507432 | None:intergenic | 25.0% |
! | GGGACAAAAATAAAATCAAA+TGG | - | chr8_3:25507417-25507436 | None:intergenic | 25.0% |
! | TGCATCTAGTAATTTGAAAA+GGG | - | chr8_3:25507450-25507469 | None:intergenic | 25.0% |
! | ATGCATCTAGTAATTTGAAA+AGG | - | chr8_3:25507451-25507470 | None:intergenic | 25.0% |
! | AAATGTAAAAAATGCAAAGG+GGG | + | chr8_3:25507625-25507644 | Msa1283810:intron | 25.0% |
! | ATGAGTGTAAAAATAGAGAA+TGG | - | chr8_3:25507954-25507973 | None:intergenic | 25.0% |
! | CCTCTATATTTCATTCATTT+GGG | - | chr8_3:25508039-25508058 | None:intergenic | 25.0% |
! | ACCTCTATATTTCATTCATT+TGG | - | chr8_3:25508040-25508059 | None:intergenic | 25.0% |
! | GTACCAATATTTGATCAATT+GGG | + | chr8_3:25508058-25508077 | Msa1283810:intron | 25.0% |
! | GATAATATTAGCATTGCATT+TGG | - | chr8_3:25508197-25508216 | None:intergenic | 25.0% |
! | CTTCCTTATAAACAAATACA+GGG | + | chr8_3:25508287-25508306 | Msa1283810:intron | 25.0% |
! | TTTCCCTGTATTTGTTTATA+AGG | - | chr8_3:25508293-25508312 | None:intergenic | 25.0% |
! | TCCCACACAAATTTAATAAA+AGG | - | chr8_3:25508719-25508738 | None:intergenic | 25.0% |
!!! | GTTTGTTCCATAGTTTTAAT+AGG | + | chr8_3:25508773-25508792 | Msa1283810:intron | 25.0% |
!! | TTTTCCACCTATTAAAACTA+TGG | - | chr8_3:25508783-25508802 | None:intergenic | 25.0% |
!!! | TATACTTGGTGTATTCTTTT+TGG | + | chr8_3:25508850-25508869 | Msa1283810:CDS | 25.0% |
! | ACATTGTTCATTTGTCAATT+GGG | + | chr8_3:25509011-25509030 | Msa1283810:CDS | 25.0% |
! | CGAAAAGTTTAACAAATGAT+AGG | + | chr8_3:25509515-25509534 | Msa1283810:CDS | 25.0% |
! | TTGTTTATCCTTAACCATTT+CGG | - | chr8_3:25509767-25509786 | None:intergenic | 25.0% |
! | TCTTAAGTTTCCTATACAAT+TGG | - | chr8_3:25509876-25509895 | None:intergenic | 25.0% |
! | ATCTTGTAAACAGGATTAAA+AGG | - | chr8_3:25509904-25509923 | None:intergenic | 25.0% |
! | TTCAATGGTTAAACCATTAT+TGG | - | chr8_3:25510334-25510353 | None:intergenic | 25.0% |
! | AATAATGGTTTAACCATTGA+AGG | + | chr8_3:25510333-25510352 | Msa1283810:CDS | 25.0% |
!! | GATATTAGAACCTGAATTTT+TGG | - | chr8_3:25510405-25510424 | None:intergenic | 25.0% |
! | GAAACAAACATTTCAAATAG+AGG | - | chr8_3:25510450-25510469 | None:intergenic | 25.0% |
! | AACTGAGGATTATTATACTT+TGG | - | chr8_3:25510706-25510725 | None:intergenic | 25.0% |
! | TATTGAACACAAATTTAGAG+AGG | + | chr8_3:25510795-25510814 | Msa1283810:intron | 25.0% |
! | AATAGTAGATCTGAATTTGT+AGG | + | chr8_3:25510883-25510902 | Msa1283810:intron | 25.0% |
!! | TTGGATAGTGGTTATAAAAA+AGG | + | chr8_3:25511087-25511106 | Msa1283810:intron | 25.0% |
!!! | AGGTTTGTTAGTATAACATT+TGG | + | chr8_3:25511658-25511677 | Msa1283810:intron | 25.0% |
! | ATTTGGTTATCATCTATTCA+AGG | + | chr8_3:25511675-25511694 | Msa1283810:intron | 25.0% |
! | TTTGGTTATCATCTATTCAA+GGG | + | chr8_3:25511676-25511695 | Msa1283810:intron | 25.0% |
! | CAATAACTTGATATATGCTT+TGG | - | chr8_3:25511903-25511922 | None:intergenic | 25.0% |
! | ATATCAAGTTATTGTCCTTA+TGG | + | chr8_3:25511909-25511928 | Msa1283810:CDS | 25.0% |
! | CTTGAAAATTAAGAACCATA+AGG | - | chr8_3:25511927-25511946 | None:intergenic | 25.0% |
!! | CTTATGGTTCTTAATTTTCA+AGG | + | chr8_3:25511925-25511944 | Msa1283810:intron | 25.0% |
! | AAGAATATACTTGGTATAAG+TGG | + | chr8_3:25511949-25511968 | Msa1283810:intron | 25.0% |
! | TGTAACAAAATGATACCATT+GGG | - | chr8_3:25512161-25512180 | None:intergenic | 25.0% |
! | ATGTAACAAAATGATACCAT+TGG | - | chr8_3:25512162-25512181 | None:intergenic | 25.0% |
! | ACAAAAGCAAAAAAAGTTCA+GGG | - | chr8_3:25512736-25512755 | None:intergenic | 25.0% |
! | TACAAAAGCAAAAAAAGTTC+AGG | - | chr8_3:25512737-25512756 | None:intergenic | 25.0% |
! | AAAGTATATGAAGGTTATGT+GGG | - | chr8_3:25513007-25513026 | None:intergenic | 25.0% |
!! | AAAAGTATATGAAGGTTATG+TGG | - | chr8_3:25513008-25513027 | None:intergenic | 25.0% |
! | CTTTGATTCAAAGAGAAATT+TGG | + | chr8_3:25513127-25513146 | Msa1283810:three_prime_UTR | 25.0% |
TCAACTTTCATTCAATGTCA+TGG | - | chr8_3:25507038-25507057 | None:intergenic | 30.0% | |
AGTTGAAAGAAAAGTCAGTT+TGG | + | chr8_3:25507052-25507071 | Msa1283810:five_prime_UTR | 30.0% | |
!! | AACCTGCTTTTCTTGTAATA+GGG | - | chr8_3:25507248-25507267 | None:intergenic | 30.0% |
!! | AAACCTGCTTTTCTTGTAAT+AGG | - | chr8_3:25507249-25507268 | None:intergenic | 30.0% |
GGAGTACATAGAAATTAGAT+TGG | - | chr8_3:25507372-25507391 | None:intergenic | 30.0% | |
GCATCTAGTAATTTGAAAAG+GGG | - | chr8_3:25507449-25507468 | None:intergenic | 30.0% | |
CATACAAACAAAGGACAATT+TGG | + | chr8_3:25507549-25507568 | Msa1283810:intron | 30.0% | |
!! | AGTGTTGCTTATAATAGTGA+CGG | - | chr8_3:25507724-25507743 | None:intergenic | 30.0% |
! | AATCAAATGATGGCTACTTT+AGG | - | chr8_3:25507860-25507879 | None:intergenic | 30.0% |
AATAGAGAATGGTAACTTCA+GGG | - | chr8_3:25507943-25507962 | None:intergenic | 30.0% | |
AAATAGAGAATGGTAACTTC+AGG | - | chr8_3:25507944-25507963 | None:intergenic | 30.0% | |
! | ATTTCTACTTGTTAAGGTTG+TGG | - | chr8_3:25507999-25508018 | None:intergenic | 30.0% |
CCCAAATGAATGAAATATAG+AGG | + | chr8_3:25508036-25508055 | Msa1283810:intron | 30.0% | |
GGTACCAATATTTGATCAAT+TGG | + | chr8_3:25508057-25508076 | Msa1283810:intron | 30.0% | |
ACACCCAATTGATCAAATAT+TGG | - | chr8_3:25508064-25508083 | None:intergenic | 30.0% | |
ATGGGAAAACAACATACTAT+AGG | + | chr8_3:25508126-25508145 | Msa1283810:intron | 30.0% | |
GAAAACAACATACTATAGGA+AGG | + | chr8_3:25508130-25508149 | Msa1283810:intron | 30.0% | |
ATTGCATTTGGAAATGTTAC+TGG | - | chr8_3:25508185-25508204 | None:intergenic | 30.0% | |
CCTGTATTTGTTTATAAGGA+AGG | - | chr8_3:25508289-25508308 | None:intergenic | 30.0% | |
CCTTCCTTATAAACAAATAC+AGG | + | chr8_3:25508286-25508305 | Msa1283810:intron | 30.0% | |
!!! | TTTTGAGTTCAACTGACTTT+TGG | + | chr8_3:25508463-25508482 | Msa1283810:intron | 30.0% |
GTTCATAACTATGATAGCAA+TGG | + | chr8_3:25508557-25508576 | Msa1283810:CDS | 30.0% | |
!! | CTCAACACTCATTTTTCTTA+TGG | + | chr8_3:25508751-25508770 | Msa1283810:intron | 30.0% |
!!! | TGTTCCATAGTTTTAATAGG+TGG | + | chr8_3:25508776-25508795 | Msa1283810:intron | 30.0% |
GAACAAGAACATTTCAGTTA+AGG | + | chr8_3:25508934-25508953 | Msa1283810:CDS | 30.0% | |
GACATTGTTCATTTGTCAAT+TGG | + | chr8_3:25509010-25509029 | Msa1283810:CDS | 30.0% | |
CATTGTTCATTTGTCAATTG+GGG | + | chr8_3:25509012-25509031 | Msa1283810:CDS | 30.0% | |
! | AGAAAACCCTTTTCTACTTT+CGG | + | chr8_3:25509132-25509151 | Msa1283810:CDS | 30.0% |
!!! | TAGAAGTTTTGAATGACGTA+GGG | + | chr8_3:25509230-25509249 | Msa1283810:CDS | 30.0% |
GTCAATAAACTATGGATATC+TGG | + | chr8_3:25509634-25509653 | Msa1283810:CDS | 30.0% | |
TTGTGGAGATGAAAGATAAT+AGG | + | chr8_3:25509662-25509681 | Msa1283810:CDS | 30.0% | |
GAGATGAAAGATAATAGGAA+TGG | + | chr8_3:25509667-25509686 | Msa1283810:CDS | 30.0% | |
AGGAATGGAAATAAACTGAA+AGG | + | chr8_3:25509682-25509701 | Msa1283810:CDS | 30.0% | |
GAAATGGTTAAGGATAAACA+AGG | + | chr8_3:25509766-25509785 | Msa1283810:CDS | 30.0% | |
ACAAGGAAAAACCACAATAT+TGG | + | chr8_3:25509783-25509802 | Msa1283810:CDS | 30.0% | |
CAAGGAAAAACCACAATATT+GGG | + | chr8_3:25509784-25509803 | Msa1283810:CDS | 30.0% | |
GCTAAAGAAATAGTTCTCAA+AGG | - | chr8_3:25510102-25510121 | None:intergenic | 30.0% | |
!!! | TAGAACCTGAATTTTTGGTA+TGG | - | chr8_3:25510400-25510419 | None:intergenic | 30.0% |
TACATGCTTAATATTGATGC+AGG | + | chr8_3:25510473-25510492 | Msa1283810:intron | 30.0% | |
!! | GAATAGTTAGCTTGCTTTAT+AGG | - | chr8_3:25510918-25510937 | None:intergenic | 30.0% |
TTATAACCACTATCCAATGT+TGG | - | chr8_3:25511084-25511103 | None:intergenic | 30.0% | |
!!! | CACATTAGTTTTTAGCATGA+AGG | - | chr8_3:25511409-25511428 | None:intergenic | 30.0% |
TTCATAAGTTCATCGTTAAG+TGG | - | chr8_3:25511817-25511836 | None:intergenic | 30.0% | |
TTAACGATGAACTTATGAAG+AGG | + | chr8_3:25511818-25511837 | Msa1283810:CDS | 30.0% | |
TTTCAAGGGAAGAATATACT+TGG | + | chr8_3:25511940-25511959 | Msa1283810:intron | 30.0% | |
!!! | ATCTTCAACTCCTTTTTTTC+AGG | + | chr8_3:25512003-25512022 | Msa1283810:intron | 30.0% |
ATTCACTGTACCTGAAAAAA+AGG | - | chr8_3:25512016-25512035 | None:intergenic | 30.0% | |
TTCCACAAATATCTACTACA+TGG | + | chr8_3:25512196-25512215 | Msa1283810:intron | 30.0% | |
AGTTTATCTCATTGAATACC+TGG | - | chr8_3:25512407-25512426 | None:intergenic | 30.0% | |
! | GAGAAGATAAACATTTTCAG+AGG | + | chr8_3:25512438-25512457 | Msa1283810:CDS | 30.0% |
TCTCATGTTGTAATTTCACA+AGG | + | chr8_3:25512895-25512914 | Msa1283810:three_prime_UTR | 30.0% | |
CTCATGTTGTAATTTCACAA+GGG | + | chr8_3:25512896-25512915 | Msa1283810:three_prime_UTR | 30.0% | |
GAATACTATCAAAATGTGGA+GGG | - | chr8_3:25513085-25513104 | None:intergenic | 30.0% | |
TGAATACTATCAAAATGTGG+AGG | - | chr8_3:25513086-25513105 | None:intergenic | 30.0% | |
!! | CCACATTTTGATAGTATTCA+CGG | + | chr8_3:25513086-25513105 | Msa1283810:three_prime_UTR | 30.0% |
CTCTTTGAATCAAAGTTACA+AGG | - | chr8_3:25513122-25513141 | None:intergenic | 30.0% | |
ACTTTCATTCAATGTCATGG+AGG | - | chr8_3:25507035-25507054 | None:intergenic | 35.0% | |
TACACTGATCTGGAAAAACA+TGG | + | chr8_3:25507087-25507106 | Msa1283810:exon | 35.0% | |
TCTGAAAGACTTCGAATTAG+AGG | + | chr8_3:25507117-25507136 | Msa1283810:CDS | 35.0% | |
AGACTTCGAATTAGAGGATA+AGG | + | chr8_3:25507123-25507142 | Msa1283810:CDS | 35.0% | |
TCGAATTAGAGGATAAGGAT+CGG | + | chr8_3:25507128-25507147 | Msa1283810:CDS | 35.0% | |
TTGAAAAGGGGTTACATTGA+GGG | - | chr8_3:25507437-25507456 | None:intergenic | 35.0% | |
TTTGAAAAGGGGTTACATTG+AGG | - | chr8_3:25507438-25507457 | None:intergenic | 35.0% | |
!! | GTGTTGCTTATAATAGTGAC+GGG | - | chr8_3:25507723-25507742 | None:intergenic | 35.0% |
! | AGTTTAAATGAGGTTGATCC+CGG | + | chr8_3:25507892-25507911 | Msa1283810:intron | 35.0% |
!! | AGTTTCCACCCATTTGATTT+TGG | + | chr8_3:25507916-25507935 | Msa1283810:intron | 35.0% |
TTCAGGGACCAAAATCAAAT+GGG | - | chr8_3:25507927-25507946 | None:intergenic | 35.0% | |
GTTAAGGTTGTGGTTTAAGA+AGG | - | chr8_3:25507989-25508008 | None:intergenic | 35.0% | |
TGGGTGTGAAAACAAAAAAG+AGG | + | chr8_3:25508077-25508096 | Msa1283810:intron | 35.0% | |
! | CTATCTTTGAAAGATTGTGC+AGG | - | chr8_3:25508219-25508238 | None:intergenic | 35.0% |
AACAAATACAGGGAAAGCTT+CGG | + | chr8_3:25508297-25508316 | Msa1283810:intron | 35.0% | |
! | TTTCACGATATTGCTATTGC+TGG | + | chr8_3:25508353-25508372 | Msa1283810:CDS | 35.0% |
ACATGCACTTCAACATAATC+AGG | - | chr8_3:25508497-25508516 | None:intergenic | 35.0% | |
TATGTTGAAGTGCATGTTGA+TGG | + | chr8_3:25508500-25508519 | Msa1283810:CDS | 35.0% | |
ACAAGAGATGCAATTGAATC+TGG | - | chr8_3:25508539-25508558 | None:intergenic | 35.0% | |
TAAACCCAAAATACTGTTGC+CGG | - | chr8_3:25508670-25508689 | None:intergenic | 35.0% | |
GCTAGTAAATGTGTATGATG+AGG | + | chr8_3:25508820-25508839 | Msa1283810:CDS | 35.0% | |
AGTAAATGTGTATGATGAGG+TGG | + | chr8_3:25508823-25508842 | Msa1283810:CDS | 35.0% | |
GTAAATGTGTATGATGAGGT+GGG | + | chr8_3:25508824-25508843 | Msa1283810:CDS | 35.0% | |
!! | CTTTTTGGTCGTCTTTACAT+CGG | + | chr8_3:25508865-25508884 | Msa1283810:CDS | 35.0% |
AATCATTGAAGTTCTGCGAA+TGG | + | chr8_3:25508903-25508922 | Msa1283810:CDS | 35.0% | |
ATCATTGAAGTTCTGCGAAT+GGG | + | chr8_3:25508904-25508923 | Msa1283810:CDS | 35.0% | |
TCGATTTATGATCTCGTAGT+AGG | + | chr8_3:25508986-25509005 | Msa1283810:intron | 35.0% | |
ATCGACGAATCAAGTTTAAC+TGG | + | chr8_3:25509082-25509101 | Msa1283810:intron | 35.0% | |
! | GAAAACCCTTTTCTACTTTC+GGG | + | chr8_3:25509133-25509152 | Msa1283810:CDS | 35.0% |
!!! | GTAGAAGTTTTGAATGACGT+AGG | + | chr8_3:25509229-25509248 | Msa1283810:CDS | 35.0% |
!!! | AGAAGTTTTGAATGACGTAG+GGG | + | chr8_3:25509231-25509250 | Msa1283810:CDS | 35.0% |
! | GCTACTATTGTTGGTAAGAT+TGG | + | chr8_3:25509292-25509311 | Msa1283810:intron | 35.0% |
TCTTCTTACATTAGCTGTGT+TGG | + | chr8_3:25509327-25509346 | Msa1283810:intron | 35.0% | |
AAAAGCAAGGTTAAGTGTCA+CGG | - | chr8_3:25509491-25509510 | None:intergenic | 35.0% | |
! | AACTTTTCGTTGCAAAAGCA+AGG | - | chr8_3:25509504-25509523 | None:intergenic | 35.0% |
TTTATTGACCACCATGCAAT+TGG | - | chr8_3:25509623-25509642 | None:intergenic | 35.0% | |
!!! | AGTTCTGAACATACTTTTGC+AGG | + | chr8_3:25509720-25509739 | Msa1283810:CDS | 35.0% |
!!! | CCATTTCGGAAGCATTATTT+TGG | - | chr8_3:25509753-25509772 | None:intergenic | 35.0% |
CCAAAATAATGCTTCCGAAA+TGG | + | chr8_3:25509750-25509769 | Msa1283810:CDS | 35.0% | |
TAATGCTTCCGAAATGGTTA+AGG | + | chr8_3:25509756-25509775 | Msa1283810:CDS | 35.0% | |
GATTCAGCATTGTTGGAATT+TGG | + | chr8_3:25509817-25509836 | Msa1283810:CDS | 35.0% | |
ATGTCCAATGCCAATTGTAT+AGG | + | chr8_3:25509863-25509882 | Msa1283810:intron | 35.0% | |
GTTTCCTATACAATTGGCAT+TGG | - | chr8_3:25509870-25509889 | None:intergenic | 35.0% | |
ACTGTCATCATCTTGTAAAC+AGG | - | chr8_3:25509913-25509932 | None:intergenic | 35.0% | |
! | GAAAAAATCATCGACTGCAA+TGG | + | chr8_3:25510006-25510025 | Msa1283810:CDS | 35.0% |
AATAGTTCTCAAAGGTTCAG+AGG | - | chr8_3:25510094-25510113 | None:intergenic | 35.0% | |
GAAAACAACATCCCTGATAA+TGG | + | chr8_3:25510150-25510169 | Msa1283810:CDS | 35.0% | |
TCAGTGTATAGCCATTATCA+GGG | - | chr8_3:25510164-25510183 | None:intergenic | 35.0% | |
ATCAGTGTATAGCCATTATC+AGG | - | chr8_3:25510165-25510184 | None:intergenic | 35.0% | |
TATACACTGATAGCCATTCT+AGG | + | chr8_3:25510174-25510193 | Msa1283810:CDS | 35.0% | |
!! | AGGATCATTGATTCCTAGAA+TGG | - | chr8_3:25510190-25510209 | None:intergenic | 35.0% |
GCGATGATATGAATATAGCT+AGG | + | chr8_3:25510280-25510299 | Msa1283810:CDS | 35.0% | |
TGTGGTATACTCACCAATAA+TGG | + | chr8_3:25510318-25510337 | Msa1283810:CDS | 35.0% | |
CCATTGAAGGACAACAATTT+CGG | + | chr8_3:25510346-25510365 | Msa1283810:CDS | 35.0% | |
ATTTCGGAACTTGTCTACAA+TGG | + | chr8_3:25510362-25510381 | Msa1283810:CDS | 35.0% | |
GAACTTGTCTACAATGGATA+TGG | + | chr8_3:25510368-25510387 | Msa1283810:CDS | 35.0% | |
GGTTACCATACCAAAAATTC+AGG | + | chr8_3:25510392-25510411 | Msa1283810:CDS | 35.0% | |
CTTAATATTGATGCAGGTGA+TGG | + | chr8_3:25510479-25510498 | Msa1283810:intron | 35.0% | |
ATCCTTCAGATAAGCTACAA+TGG | - | chr8_3:25510532-25510551 | None:intergenic | 35.0% | |
GCTTATCTGAAGGATATGTT+TGG | + | chr8_3:25510537-25510556 | Msa1283810:CDS | 35.0% | |
GAAGAAACAGAACAAAACTG+AGG | - | chr8_3:25510721-25510740 | None:intergenic | 35.0% | |
ATGGTTTGACTGCATATAGA+AGG | - | chr8_3:25511183-25511202 | None:intergenic | 35.0% | |
AACACGACGATCTTTAATCT+TGG | + | chr8_3:25511264-25511283 | Msa1283810:intron | 35.0% | |
AGAAGACTTAGTTATGTAGG+AGG | - | chr8_3:25511386-25511405 | None:intergenic | 35.0% | |
AGGAGAAGACTTAGTTATGT+AGG | - | chr8_3:25511389-25511408 | None:intergenic | 35.0% | |
!! | TCTGCTTGCTGAATGTTTTA+TGG | + | chr8_3:25511448-25511467 | Msa1283810:intron | 35.0% |
!! | TTTATTTCTGCTTCTGTCAC+AGG | + | chr8_3:25511638-25511657 | Msa1283810:CDS | 35.0% |
GAATAGCTTTCTTCACTTTC+AGG | + | chr8_3:25511709-25511728 | Msa1283810:intron | 35.0% | |
AATTTATCACGAATGCCATG+TGG | + | chr8_3:25511863-25511882 | Msa1283810:CDS | 35.0% | |
AGGTCAATCATATTTCCCAA+TGG | + | chr8_3:25512143-25512162 | Msa1283810:intron | 35.0% | |
CACCATGTAGTAGATATTTG+TGG | - | chr8_3:25512201-25512220 | None:intergenic | 35.0% | |
GAGGAGATCGTAAATAATTG+TGG | - | chr8_3:25512267-25512286 | None:intergenic | 35.0% | |
TTCATGACAGTTTCAGTATG+AGG | - | chr8_3:25512286-25512305 | None:intergenic | 35.0% | |
AATACCTGGCAGTAGAAATA+AGG | - | chr8_3:25512393-25512412 | None:intergenic | 35.0% | |
! | TTTAAACAGCTGGGCATTTT+CGG | + | chr8_3:25512464-25512483 | Msa1283810:CDS | 35.0% |
CACACAATTCAGGAAGAATA+TGG | + | chr8_3:25512706-25512725 | Msa1283810:three_prime_UTR | 35.0% | |
CCAAAGATGAATATGATACG+TGG | - | chr8_3:25512776-25512795 | None:intergenic | 35.0% | |
CCACGTATCATATTCATCTT+TGG | + | chr8_3:25512773-25512792 | Msa1283810:three_prime_UTR | 35.0% | |
ATCATGACATGATACAGGTA+AGG | - | chr8_3:25512844-25512863 | None:intergenic | 35.0% | |
TACCTGTATCATGTCATGAT+CGG | + | chr8_3:25512844-25512863 | Msa1283810:three_prime_UTR | 35.0% | |
AATTTCACAAGGGAGTTATG+TGG | + | chr8_3:25512906-25512925 | Msa1283810:three_prime_UTR | 35.0% | |
CCGTGAATACTATCAAAATG+TGG | - | chr8_3:25513089-25513108 | None:intergenic | 35.0% | |
! | TTTGATAGTATTCACGGTGA+TGG | + | chr8_3:25513092-25513111 | Msa1283810:three_prime_UTR | 35.0% |
TGGTTGACATGACTTAGAAG+TGG | - | chr8_3:25506987-25507006 | None:intergenic | 40.0% | |
ATTGAGAGACTACACTGATC+TGG | + | chr8_3:25507077-25507096 | Msa1283810:five_prime_UTR | 40.0% | |
ACTGATCTGGAAAAACATGG+AGG | + | chr8_3:25507090-25507109 | Msa1283810:exon | 40.0% | |
CTGATCTGGAAAAACATGGA+GGG | + | chr8_3:25507091-25507110 | Msa1283810:exon | 40.0% | |
TGCCCTATTACAAGAAAAGC+AGG | + | chr8_3:25507243-25507262 | Msa1283810:CDS | 40.0% | |
CAAATGGGTGGTTACATCAA+GGG | - | chr8_3:25507401-25507420 | None:intergenic | 40.0% | |
TCAAATGGGTGGTTACATCA+AGG | - | chr8_3:25507402-25507421 | None:intergenic | 40.0% | |
TGCAAAGGGGGTTACATTAA+AGG | + | chr8_3:25507637-25507656 | Msa1283810:intron | 40.0% | |
AAGGGGGTTACATTAAAGGA+CGG | + | chr8_3:25507641-25507660 | Msa1283810:intron | 40.0% | |
! | TGCTTATAATAGTGACGGGA+GGG | - | chr8_3:25507719-25507738 | None:intergenic | 40.0% |
! | TTGCTTATAATAGTGACGGG+AGG | - | chr8_3:25507720-25507739 | None:intergenic | 40.0% |
! | AATGATGGCTACTTTAGGAG+AGG | - | chr8_3:25507855-25507874 | None:intergenic | 40.0% |
ATCAAATGGGTGGAAACTTC+CGG | - | chr8_3:25507914-25507933 | None:intergenic | 40.0% | |
CTTCAGGGACCAAAATCAAA+TGG | - | chr8_3:25507928-25507947 | None:intergenic | 40.0% | |
ACAAATACAGGGAAAGCTTC+GGG | + | chr8_3:25508298-25508317 | Msa1283810:intron | 40.0% | |
! | CGATATTGCTATTGCTGGTA+CGG | + | chr8_3:25508358-25508377 | Msa1283810:intron | 40.0% |
GGGAAAATAGCCTAAATACC+CGG | + | chr8_3:25508648-25508667 | Msa1283810:intron | 40.0% | |
AATACTGTTGCCGGGTATTT+AGG | - | chr8_3:25508661-25508680 | None:intergenic | 40.0% | |
! | AATACCCGGCAACAGTATTT+TGG | + | chr8_3:25508662-25508681 | Msa1283810:intron | 40.0% |
! | ATACCCGGCAACAGTATTTT+GGG | + | chr8_3:25508663-25508682 | Msa1283810:intron | 40.0% |
AAACCCAAAATACTGTTGCC+GGG | - | chr8_3:25508669-25508688 | None:intergenic | 40.0% | |
! | TCGCATGTTTTTCTGCATAG+CGG | - | chr8_3:25508694-25508713 | None:intergenic | 40.0% |
GTGGAAAATTTGCCACTGAA+GGG | + | chr8_3:25508795-25508814 | Msa1283810:CDS | 40.0% | |
ATTTACTAGCAACCCTTCAG+TGG | - | chr8_3:25508810-25508829 | None:intergenic | 40.0% | |
GATGAGGTGGGTATTATACT+TGG | + | chr8_3:25508836-25508855 | Msa1283810:CDS | 40.0% | |
CGCAGAACTTCAATGATTGA+TGG | - | chr8_3:25508901-25508920 | None:intergenic | 40.0% | |
CGAATCAAGTTTAACTGGTC+AGG | + | chr8_3:25509087-25509106 | Msa1283810:intron | 40.0% | |
TGGTTCCCGAAAGTAGAAAA+GGG | - | chr8_3:25509141-25509160 | None:intergenic | 40.0% | |
TTGGTTCCCGAAAGTAGAAA+AGG | - | chr8_3:25509142-25509161 | None:intergenic | 40.0% | |
AACCAAAGTGATAGATGGGT+CGG | + | chr8_3:25509156-25509175 | Msa1283810:CDS | 40.0% | |
CCATTACAGGTGAAACTGAA+CGG | + | chr8_3:25509265-25509284 | Msa1283810:CDS | 40.0% | |
AACGGAGTTGCTACTATTGT+TGG | + | chr8_3:25509283-25509302 | Msa1283810:CDS | 40.0% | |
CTTGTGTATAAAGCAACTCG+CGG | + | chr8_3:25509361-25509380 | Msa1283810:CDS | 40.0% | |
! | CTCGCGGAGATTTTACTAAT+TGG | + | chr8_3:25509377-25509396 | Msa1283810:CDS | 40.0% |
! | CAGCTTCATAGCATCTTTTG+AGG | - | chr8_3:25509404-25509423 | None:intergenic | 40.0% |
! | ATAGTCATTGCTGTTCCAGA+AGG | + | chr8_3:25509454-25509473 | Msa1283810:CDS | 40.0% |
TGTTCCAGAAGGTTTACCAT+TGG | + | chr8_3:25509465-25509484 | Msa1283810:CDS | 40.0% | |
TCTTTCTGCATGTGAAGCAA+TGG | + | chr8_3:25509552-25509571 | Msa1283810:CDS | 40.0% | |
CTTTCTGCATGTGAAGCAAT+GGG | + | chr8_3:25509553-25509572 | Msa1283810:CDS | 40.0% | |
GCATGGTGGTCAATAAACTA+TGG | + | chr8_3:25509626-25509645 | Msa1283810:CDS | 40.0% | |
ATGGATATCTGGAGAAGTTG+TGG | + | chr8_3:25509645-25509664 | Msa1283810:CDS | 40.0% | |
TGTTGGAGTTCCCAATATTG+TGG | - | chr8_3:25509797-25509816 | None:intergenic | 40.0% | |
TCCAACAGATTCAGCATTGT+TGG | + | chr8_3:25509810-25509829 | Msa1283810:CDS | 40.0% | |
TCCAACAATGCTGAATCTGT+TGG | - | chr8_3:25509814-25509833 | None:intergenic | 40.0% | |
!! | TTGGAATTTGGCTTGCTGTT+GGG | + | chr8_3:25509829-25509848 | Msa1283810:CDS | 40.0% |
AAAACTCGTAGTCCACCATT+GGG | - | chr8_3:25509949-25509968 | None:intergenic | 40.0% | |
! | GGACTACGAGTTTTCTGTAA+AGG | + | chr8_3:25509955-25509974 | Msa1283810:intron | 40.0% |
! | CATTCTTCGCATGGTTTTCA+AGG | - | chr8_3:25510047-25510066 | None:intergenic | 40.0% |
!!! | CAGGGATGTTGTTTTCAGTA+GGG | - | chr8_3:25510146-25510165 | None:intergenic | 40.0% |
!!! | TCAGGGATGTTGTTTTCAGT+AGG | - | chr8_3:25510147-25510166 | None:intergenic | 40.0% |
ATCAATGATCCTATACGCCT+TGG | + | chr8_3:25510198-25510217 | Msa1283810:CDS | 40.0% | |
GTTCAAACTTGTATAGCAGC+AGG | + | chr8_3:25510234-25510253 | Msa1283810:CDS | 40.0% | |
AGGACTATTGCTACAGAATG+TGG | + | chr8_3:25510300-25510319 | Msa1283810:CDS | 40.0% | |
CCGAAATTGTTGTCCTTCAA+TGG | - | chr8_3:25510349-25510368 | None:intergenic | 40.0% | |
CTTGTCTACAATGGATATGG+AGG | + | chr8_3:25510371-25510390 | Msa1283810:CDS | 40.0% | |
! | ACAATGGAGTGTTTGTCATG+TGG | - | chr8_3:25510516-25510535 | None:intergenic | 40.0% |
CTCCATTGTAGCTTATCTGA+AGG | + | chr8_3:25510527-25510546 | Msa1283810:CDS | 40.0% | |
! | TCTGAAGGATATGTTTGGTG+AGG | + | chr8_3:25510542-25510561 | Msa1283810:CDS | 40.0% |
! | TATGTTTGGTGAGGTTGTTG+CGG | + | chr8_3:25510551-25510570 | Msa1283810:CDS | 40.0% |
TTCAAGAGATGCTACGAGTT+TGG | + | chr8_3:25510738-25510757 | Msa1283810:intron | 40.0% | |
GACATCCTTTACCTTAAAGC+CGG | + | chr8_3:25511109-25511128 | Msa1283810:intron | 40.0% | |
TTGACTGCATATAGAAGGAC+CGG | - | chr8_3:25511178-25511197 | None:intergenic | 40.0% | |
GATACTGAACTACCTTACGA+AGG | - | chr8_3:25511301-25511320 | None:intergenic | 40.0% | |
! | CCAATGGTAAAAGCCTTGTA+CGG | + | chr8_3:25511349-25511368 | Msa1283810:intron | 40.0% |
GACTTAGTTATGTAGGAGGT+AGG | - | chr8_3:25511382-25511401 | None:intergenic | 40.0% | |
TATTATCAAATGGGGACGTG+CGG | + | chr8_3:25511547-25511566 | Msa1283810:CDS | 40.0% | |
AACAGCCATTATTGTTGCTC+TGG | + | chr8_3:25511607-25511626 | Msa1283810:CDS | 40.0% | |
GATCACCAGAGCAACAATAA+TGG | - | chr8_3:25511615-25511634 | None:intergenic | 40.0% | |
! | GCTTTGGGTCAACTTGATTA+TGG | + | chr8_3:25511759-25511778 | Msa1283810:CDS | 40.0% |
! | AATTTTTCTCCCCTTCCAAC+TGG | - | chr8_3:25511847-25511866 | None:intergenic | 40.0% |
! | GCCATGTGGAGGAATATTTT+TGG | + | chr8_3:25511877-25511896 | Msa1283810:CDS | 40.0% |
GCCAAAAATATTCCTCCACA+TGG | - | chr8_3:25511881-25511900 | None:intergenic | 40.0% | |
GGCAGTAGAAATAAGGCAAA+TGG | - | chr8_3:25512386-25512405 | None:intergenic | 40.0% | |
!! | TTTGCCTTATTTCTACTGCC+AGG | + | chr8_3:25512386-25512405 | Msa1283810:intron | 40.0% |
!!! | TCAGAGGCATTTTAAACAGC+TGG | + | chr8_3:25512454-25512473 | Msa1283810:CDS | 40.0% |
!!! | CAGAGGCATTTTAAACAGCT+GGG | + | chr8_3:25512455-25512474 | Msa1283810:CDS | 40.0% |
GTAATCATTGTGCAGTTCCT+TGG | + | chr8_3:25512516-25512535 | Msa1283810:CDS | 40.0% | |
AGTTTCCTTTCGCGGAATAT+TGG | + | chr8_3:25512804-25512823 | Msa1283810:three_prime_UTR | 40.0% | |
CATGAAGTCAACGCATCGTT+TGG | - | chr8_3:25507007-25507026 | None:intergenic | 45.0% | |
TGCATTTCGGAACCTTCTAC+GGG | - | chr8_3:25507206-25507225 | None:intergenic | 45.0% | |
CTGCATTTCGGAACCTTCTA+CGG | - | chr8_3:25507207-25507226 | None:intergenic | 45.0% | |
TAGAAGGTTCCGAAATGCAG+AGG | + | chr8_3:25507207-25507226 | Msa1283810:CDS | 45.0% | |
TTGCGAGATCCTCTGCATTT+CGG | - | chr8_3:25507219-25507238 | None:intergenic | 45.0% | |
GGGTTACATTAAAGGACGGA+GGG | + | chr8_3:25507645-25507664 | Msa1283810:intron | 45.0% | |
TCAAATGGGTGGAAACTTCC+GGG | - | chr8_3:25507913-25507932 | None:intergenic | 45.0% | |
AGGGACCAAAATCAAATGGG+TGG | - | chr8_3:25507924-25507943 | None:intergenic | 45.0% | |
!! | ATGGAGTTGAAGGCATTGCA+AGG | + | chr8_3:25508594-25508613 | Msa1283810:CDS | 45.0% |
AAGGAAACTTCGTGTCTCAG+TGG | + | chr8_3:25508613-25508632 | Msa1283810:CDS | 45.0% | |
GGTGGAAAATTTGCCACTGA+AGG | + | chr8_3:25508794-25508813 | Msa1283810:intron | 45.0% | |
TCAGTTAAGGTCACACGAGA+TGG | + | chr8_3:25508947-25508966 | Msa1283810:CDS | 45.0% | |
CAGTTAAGGTCACACGAGAT+GGG | + | chr8_3:25508948-25508967 | Msa1283810:CDS | 45.0% | |
GGGATCAAATACCTGCTGAT+GGG | + | chr8_3:25509032-25509051 | Msa1283810:CDS | 45.0% | |
TCGGGAACCAAAGTGATAGA+TGG | + | chr8_3:25509151-25509170 | Msa1283810:CDS | 45.0% | |
CGGGAACCAAAGTGATAGAT+GGG | + | chr8_3:25509152-25509171 | Msa1283810:CDS | 45.0% | |
ACCAAAGTGATAGATGGGTC+GGG | + | chr8_3:25509157-25509176 | Msa1283810:CDS | 45.0% | |
TGTTGGCATGAGGACTGAAT+GGG | + | chr8_3:25509198-25509217 | Msa1283810:CDS | 45.0% | |
!!! | AGTTTTGAATGACGTAGGGG+TGG | + | chr8_3:25509234-25509253 | Msa1283810:CDS | 45.0% |
CCGTTCAGTTTCACCTGTAA+TGG | - | chr8_3:25509268-25509287 | None:intergenic | 45.0% | |
ATTGACCACCATGCAATTGG+AGG | - | chr8_3:25509620-25509639 | None:intergenic | 45.0% | |
!! | GTTGGAATTTGGCTTGCTGT+TGG | + | chr8_3:25509828-25509847 | Msa1283810:CDS | 45.0% |
!! | TGGAATTTGGCTTGCTGTTG+GGG | + | chr8_3:25509830-25509849 | Msa1283810:CDS | 45.0% |
!! | GTCCTTGTTAGTCTTCCCAA+TGG | + | chr8_3:25509931-25509950 | Msa1283810:intron | 45.0% |
CACCATTGGGAAGACTAACA+AGG | - | chr8_3:25509936-25509955 | None:intergenic | 45.0% | |
!! | CTTGTTAGTCTTCCCAATGG+TGG | + | chr8_3:25509934-25509953 | Msa1283810:intron | 45.0% |
GAAAACTCGTAGTCCACCAT+TGG | - | chr8_3:25509950-25509969 | None:intergenic | 45.0% | |
CAAGATCGACATTCTTCGCA+TGG | - | chr8_3:25510056-25510075 | None:intergenic | 45.0% | |
TCTTTGACACCAAGGCGTAT+AGG | - | chr8_3:25510210-25510229 | None:intergenic | 45.0% | |
! | TGGAGTGTTTGTCATGTGGT+AGG | - | chr8_3:25510512-25510531 | None:intergenic | 45.0% |
CTTCGCAGCTAAGTTCTTGT+TGG | - | chr8_3:25511049-25511068 | None:intergenic | 45.0% | |
! | GATTGTCGAGTTGCCAACAT+TGG | + | chr8_3:25511068-25511087 | Msa1283810:intron | 45.0% |
GAGTTGCCAACATTGGATAG+TGG | + | chr8_3:25511075-25511094 | Msa1283810:intron | 45.0% | |
!! | CACAACCGGCTTTAAGGTAA+AGG | - | chr8_3:25511117-25511136 | None:intergenic | 45.0% |
TTACCTTAAAGCCGGTTGTG+TGG | + | chr8_3:25511117-25511136 | Msa1283810:intron | 45.0% | |
ATATAGAAGGACCGGACATC+CGG | - | chr8_3:25511170-25511189 | None:intergenic | 45.0% | |
GCTCTTCAACATCCTTCGTA+AGG | + | chr8_3:25511286-25511305 | Msa1283810:intron | 45.0% | |
! | CCGTACAAGGCTTTTACCAT+TGG | - | chr8_3:25511352-25511371 | None:intergenic | 45.0% |
TAACAGCTGTGCAGTTGCTT+TGG | + | chr8_3:25511743-25511762 | Msa1283810:CDS | 45.0% | |
! | AACAGCTGTGCAGTTGCTTT+GGG | + | chr8_3:25511744-25511763 | Msa1283810:CDS | 45.0% |
GCTCACTGACAAGAGCTAAA+GGG | - | chr8_3:25511795-25511814 | None:intergenic | 45.0% | |
TTATCACGAATGCCATGTGG+AGG | + | chr8_3:25511866-25511885 | Msa1283810:CDS | 45.0% | |
CTGTACAGGCAAAATTGCCA+AGG | - | chr8_3:25512536-25512555 | None:intergenic | 45.0% | |
AACCAGAGTTCCAAGTTCAG+AGG | - | chr8_3:25512561-25512580 | None:intergenic | 45.0% | |
GATGTAAGTATTCGCCGTGA+CGG | + | chr8_3:25512651-25512670 | Msa1283810:CDS | 45.0% | |
CCTGAATTGTGTGCTAGCTA+TGG | - | chr8_3:25512699-25512718 | None:intergenic | 45.0% | |
CCATAGCTAGCACACAATTC+AGG | + | chr8_3:25512696-25512715 | Msa1283810:exon | 45.0% | |
CTCCTTGAAGTTTCCTTTCG+CGG | + | chr8_3:25512796-25512815 | Msa1283810:three_prime_UTR | 45.0% | |
TTCCGCGAAAGGAAACTTCA+AGG | - | chr8_3:25512801-25512820 | None:intergenic | 45.0% | |
TGATGCCAATATTCCGCGAA+AGG | - | chr8_3:25512812-25512831 | None:intergenic | 45.0% | |
CACCGATCATGACATGATAC+AGG | - | chr8_3:25512849-25512868 | None:intergenic | 45.0% | |
AAATGTGGAGGGAACTTCTG+AGG | - | chr8_3:25513074-25513093 | None:intergenic | 45.0% | |
GTGAAGAGTCGTTGATGCGT+TGG | + | chr8_3:25507152-25507171 | Msa1283810:CDS | 50.0% | |
TGGTGAAGAATCCCCGTAGA+AGG | + | chr8_3:25507191-25507210 | Msa1283810:CDS | 50.0% | |
GCATTTCGGAACCTTCTACG+GGG | - | chr8_3:25507205-25507224 | None:intergenic | 50.0% | |
TGGTTACATCAAGGGACGGA+GGG | - | chr8_3:25507393-25507412 | None:intergenic | 50.0% | |
TGGGTGGTTACATCAAGGGA+CGG | - | chr8_3:25507397-25507416 | None:intergenic | 50.0% | |
GGGGTTACATTAAAGGACGG+AGG | + | chr8_3:25507644-25507663 | Msa1283810:intron | 50.0% | |
! | ACGGGAGGGAGTATGTACTA+TGG | - | chr8_3:25507705-25507724 | None:intergenic | 50.0% |
GGGGATCAAATACCTGCTGA+TGG | + | chr8_3:25509031-25509050 | Msa1283810:CDS | 50.0% | |
TCGATGCAAATCCCATCAGC+AGG | - | chr8_3:25509046-25509065 | None:intergenic | 50.0% | |
CCAAAGTGATAGATGGGTCG+GGG | + | chr8_3:25509158-25509177 | Msa1283810:CDS | 50.0% | |
AAGATGCTAGTGGCAGCTGT+TGG | + | chr8_3:25509181-25509200 | Msa1283810:CDS | 50.0% | |
CTGTTGGCATGAGGACTGAA+TGG | + | chr8_3:25509197-25509216 | Msa1283810:CDS | 50.0% | |
GTTGGCATGAGGACTGAATG+GGG | + | chr8_3:25509199-25509218 | Msa1283810:CDS | 50.0% | |
TTTGAATGACGTAGGGGTGG+AGG | + | chr8_3:25509237-25509256 | Msa1283810:CDS | 50.0% | |
ACGGCCAATGGTAAACCTTC+TGG | - | chr8_3:25509472-25509491 | None:intergenic | 50.0% | |
AGGTTAAGTGTCACGGCCAA+TGG | - | chr8_3:25509484-25509503 | None:intergenic | 50.0% | |
! | CAAATGATAGGGCACTCGTG+AGG | + | chr8_3:25509527-25509546 | Msa1283810:CDS | 50.0% |
GACAGTGACCTCCAATTGCA+TGG | + | chr8_3:25509609-25509628 | Msa1283810:CDS | 50.0% | |
AGTGACCTCCAATTGCATGG+TGG | + | chr8_3:25509612-25509631 | Msa1283810:CDS | 50.0% | |
!! | GGAATTTGGCTTGCTGTTGG+GGG | + | chr8_3:25509831-25509850 | Msa1283810:CDS | 50.0% |
!! | GAATTTGGCTTGCTGTTGGG+GGG | + | chr8_3:25509832-25509851 | Msa1283810:CDS | 50.0% |
GAACGACGTCTTTGACACCA+AGG | - | chr8_3:25510218-25510237 | None:intergenic | 50.0% | |
AGCAGGAGTAACCATTGCCA+TGG | + | chr8_3:25510251-25510270 | Msa1283810:CDS | 50.0% | |
GTAACCATTGCCATGGTCAC+TGG | + | chr8_3:25510258-25510277 | Msa1283810:CDS | 50.0% | |
CATATCATCGCCAGTGACCA+TGG | - | chr8_3:25510271-25510290 | None:intergenic | 50.0% | |
GTTGTTGCGGTTACTGGTGA+TGG | + | chr8_3:25510564-25510583 | Msa1283810:CDS | 50.0% | |
GCACACATTGGAGTTGCCAT+GGG | + | chr8_3:25510615-25510634 | Msa1283810:CDS | 50.0% | |
GGAGTTGCCATGGGATTATC+AGG | + | chr8_3:25510624-25510643 | Msa1283810:CDS | 50.0% | |
CTCTGTGCCTGATAATCCCA+TGG | - | chr8_3:25510634-25510653 | None:intergenic | 50.0% | |
CATGGGATTATCAGGCACAG+AGG | + | chr8_3:25510632-25510651 | Msa1283810:CDS | 50.0% | |
AGCAACTGCACAGCTGTTAG+CGG | - | chr8_3:25511742-25511761 | None:intergenic | 50.0% | |
TGACAAGAGCTAAAGGGCAG+AGG | - | chr8_3:25511789-25511808 | None:intergenic | 50.0% | |
GGCTCACTGACAAGAGCTAA+AGG | - | chr8_3:25511796-25511815 | None:intergenic | 50.0% | |
CTTATGAAGAGGCCTCCAGT+TGG | + | chr8_3:25511829-25511848 | Msa1283810:CDS | 50.0% | |
! | TTTTCTCCCCTTCCAACTGG+AGG | - | chr8_3:25511844-25511863 | None:intergenic | 50.0% |
!! | CAAGTTCAGAGGCACTGTAC+AGG | - | chr8_3:25512550-25512569 | None:intergenic | 50.0% |
CTGTACAGTGCCTCTGAACT+TGG | + | chr8_3:25512548-25512567 | Msa1283810:CDS | 50.0% | |
TGCCTCTGAACTTGGAACTC+TGG | + | chr8_3:25512556-25512575 | Msa1283810:CDS | 50.0% | |
TGTGCTAGCTATGGTTGTGC+AGG | - | chr8_3:25512690-25512709 | None:intergenic | 50.0% | |
GGGATTCTTCACCAGCGAGA+CGG | - | chr8_3:25507185-25507204 | None:intergenic | 55.0% | |
GTGGTTACATCAAGGGACGG+AGG | - | chr8_3:25507394-25507413 | None:intergenic | 55.0% | |
TCTCAGTGGCAGCTGGTGTT+AGG | + | chr8_3:25508627-25508646 | Msa1283810:intron | 55.0% | |
! | CTCAGTGGCAGCTGGTGTTA+GGG | + | chr8_3:25508628-25508647 | Msa1283810:intron | 55.0% |
CCCCGACCCATCTATCACTT+TGG | - | chr8_3:25509161-25509180 | None:intergenic | 55.0% | |
TAGTGGCAGCTGTTGGCATG+AGG | + | chr8_3:25509188-25509207 | Msa1283810:CDS | 55.0% | |
GGTGGAGGAAACGCCATTAC+AGG | + | chr8_3:25509252-25509271 | Msa1283810:CDS | 55.0% | |
ATCGCCAGTGACCATGGCAA+TGG | - | chr8_3:25510265-25510284 | None:intergenic | 55.0% | |
GGTGAGGTTGTTGCGGTTAC+TGG | + | chr8_3:25510558-25510577 | Msa1283810:CDS | 55.0% | |
TGATGCTCCTGCACTGCATG+AGG | + | chr8_3:25510593-25510612 | Msa1283810:CDS | 55.0% | |
ATGTGTGCCTCATGCAGTGC+AGG | - | chr8_3:25510603-25510622 | None:intergenic | 55.0% | |
GCACTGCATGAGGCACACAT+TGG | + | chr8_3:25510603-25510622 | Msa1283810:CDS | 55.0% | |
GGCACACATTGGAGTTGCCA+TGG | + | chr8_3:25510614-25510633 | Msa1283810:CDS | 55.0% | |
! | TGGCCACACAACCGGCTTTA+AGG | - | chr8_3:25511123-25511142 | None:intergenic | 55.0% |
! | TAGCAGGTTGGCCACACAAC+CGG | - | chr8_3:25511131-25511150 | None:intergenic | 55.0% |
GTTGTGTGGCCAACCTGCTA+CGG | + | chr8_3:25511131-25511150 | Msa1283810:intron | 55.0% | |
TAAGTGGCTCCGTAGCAGGT+TGG | - | chr8_3:25511143-25511162 | None:intergenic | 55.0% | |
AGTGTAAGTGGCTCCGTAGC+AGG | - | chr8_3:25511147-25511166 | None:intergenic | 55.0% | |
CTACGGAGCCACTTACACTC+CGG | + | chr8_3:25511148-25511167 | Msa1283810:intron | 55.0% | |
CCACTTACACTCCGGATGTC+CGG | + | chr8_3:25511156-25511175 | Msa1283810:intron | 55.0% | |
! | GGTAGGCTGCTTTCCGTACA+AGG | - | chr8_3:25511365-25511384 | None:intergenic | 55.0% |
GCAACTGCACAGCTGTTAGC+GGG | - | chr8_3:25511741-25511760 | None:intergenic | 55.0% | |
TGAAGAGGCCTCCAGTTGGA+AGG | + | chr8_3:25511833-25511852 | Msa1283810:CDS | 55.0% | |
GAAGAGGCCTCCAGTTGGAA+GGG | + | chr8_3:25511834-25511853 | Msa1283810:CDS | 55.0% | |
AAGAGGCCTCCAGTTGGAAG+GGG | + | chr8_3:25511835-25511854 | Msa1283810:CDS | 55.0% | |
TATTCGCCGTGACGGTTACC+AGG | + | chr8_3:25512659-25512678 | Msa1283810:CDS | 55.0% | |
! | GAAGTGCCTGGTAACCGTCA+CGG | - | chr8_3:25512668-25512687 | None:intergenic | 55.0% |
!! | ATGGTTGTGCAGGAAGTGCC+TGG | - | chr8_3:25512680-25512699 | None:intergenic | 55.0% |
CTTCGTGTCTCAGTGGCAGC+TGG | + | chr8_3:25508620-25508639 | Msa1283810:CDS | 60.0% | |
TGGGTCGGGGAAGATGCTAG+TGG | + | chr8_3:25509171-25509190 | Msa1283810:CDS | 60.0% | |
CCGGACATCCGGAGTGTAAG+TGG | - | chr8_3:25511159-25511178 | None:intergenic | 60.0% | |
!! | TTGGAGAAGCGCCGTCTCGC+TGG | + | chr8_3:25507171-25507190 | Msa1283810:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 25506976 | 25513175 | 25506976 | ID=Msa1283810;Name=Msa1283810 |
chr8_3 | mRNA | 25506976 | 25513175 | 25506976 | ID=Msa1283810-mRNA-1;Parent=Msa1283810;Name=Msa1283810-mRNA-1;_AED=0.16;_eAED=0.16;_QI=130|0.38|0.35|1|0.38|0.28|14|474|869 |
chr8_3 | exon | 25506976 | 25507264 | 25506976 | ID=Msa1283810-mRNA-1:exon:9001;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25508308 | 25508374 | 25508308 | ID=Msa1283810-mRNA-1:exon:9002;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25508492 | 25508641 | 25508492 | ID=Msa1283810-mRNA-1:exon:9003;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25508795 | 25509003 | 25508795 | ID=Msa1283810-mRNA-1:exon:9004;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25509008 | 25509094 | 25509008 | ID=Msa1283810-mRNA-1:exon:9005;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25509109 | 25509304 | 25509109 | ID=Msa1283810-mRNA-1:exon:9006;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25509341 | 25509583 | 25509341 | ID=Msa1283810-mRNA-1:exon:9007;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25509608 | 25509853 | 25509608 | ID=Msa1283810-mRNA-1:exon:9008;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25509977 | 25510219 | 25509977 | ID=Msa1283810-mRNA-1:exon:9009;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25510229 | 25510413 | 25510229 | ID=Msa1283810-mRNA-1:exon:9010;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25510495 | 25510653 | 25510495 | ID=Msa1283810-mRNA-1:exon:9011;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25511488 | 25511659 | 25511488 | ID=Msa1283810-mRNA-1:exon:9012;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25511731 | 25511930 | 25511731 | ID=Msa1283810-mRNA-1:exon:9013;Parent=Msa1283810-mRNA-1 |
chr8_3 | exon | 25512408 | 25513175 | 25512408 | ID=Msa1283810-mRNA-1:exon:9014;Parent=Msa1283810-mRNA-1 |
chr8_3 | five_prime_UTR | 25506976 | 25507105 | 25506976 | ID=Msa1283810-mRNA-1:five_prime_utr;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25507106 | 25507264 | 25507106 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25508308 | 25508374 | 25508308 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25508492 | 25508641 | 25508492 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25508795 | 25509003 | 25508795 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25509008 | 25509094 | 25509008 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25509109 | 25509304 | 25509109 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25509341 | 25509583 | 25509341 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25509608 | 25509853 | 25509608 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25509977 | 25510219 | 25509977 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25510229 | 25510413 | 25510229 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25510495 | 25510653 | 25510495 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25511488 | 25511659 | 25511488 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25511731 | 25511930 | 25511731 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | CDS | 25512408 | 25512701 | 25512408 | ID=Msa1283810-mRNA-1:cds;Parent=Msa1283810-mRNA-1 |
chr8_3 | three_prime_UTR | 25512702 | 25513175 | 25512702 | ID=Msa1283810-mRNA-1:three_prime_utr;Parent=Msa1283810-mRNA-1 |
Gene Sequence |
Protein sequence |