AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1330370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330370 MtrunA17_Chr4g0058591 98.633 512 4 3 1 511 1 510 0.0 1020
Msa1330370 MtrunA17_Chr2g0330401 73.510 453 117 1 153 605 46 495 0.0 703
Msa1330370 MtrunA17_Chr6g0449911 57.109 422 176 4 184 604 146 563 6.49e-159 473
Msa1330370 MtrunA17_Chr2g0293631 55.556 414 179 4 184 595 477 887 1.11e-146 454
Msa1330370 MtrunA17_Chr7g0270131 46.201 487 225 5 161 619 190 667 2.37e-136 417
Msa1330370 MtrunA17_Chr2g0277821 45.778 450 238 3 158 604 459 905 7.63e-131 411
Msa1330370 MtrunA17_Chr5g0409981 46.617 399 199 5 200 592 101 491 2.84e-117 359
Msa1330370 MtrunA17_Chr3g0121351 44.124 451 233 7 155 587 95 544 1.59e-114 355
Msa1330370 MtrunA17_Chr4g0063551 43.172 454 235 7 181 613 116 567 4.24e-113 353
Msa1330370 MtrunA17_Chr3g0107851 43.781 402 208 5 182 569 94 491 2.44e-107 335
Msa1330370 MtrunA17_Chr1g0176041 41.379 493 242 13 134 609 105 567 3.10e-106 333
Msa1330370 MtrunA17_Chr1g0200181 39.150 447 258 6 173 609 115 557 6.64e-94 301
Msa1330370 MtrunA17_Chr4g0076491 39.202 426 237 5 173 578 257 680 1.97e-93 303
Msa1330370 MtrunA17_Chr1g0157691 40.191 418 237 5 173 580 117 531 2.06e-92 297
Msa1330370 MtrunA17_Chr6g0449741 39.614 414 226 6 173 566 219 628 5.71e-90 293
Msa1330370 MtrunA17_Chr5g0442191 37.677 353 211 5 214 562 92 439 3.26e-73 246
Msa1330370 MtrunA17_Chr4g0058601 97.458 118 0 1 512 629 9 123 5.34e-72 228
Msa1330370 MtrunA17_Chr1g0193491 35.443 395 237 8 193 575 100 488 1.98e-68 234
Msa1330370 MtrunA17_Chr2g0297261 35.013 377 239 2 186 562 17 387 5.05e-68 227
Msa1330370 MtrunA17_Chr6g0483491 36.314 369 229 4 199 566 6 369 1.02e-67 227
Msa1330370 MtrunA17_Chr7g0271121 37.190 363 211 5 209 562 112 466 3.30e-67 233
Msa1330370 MtrunA17_Chr2g0300291 38.378 370 213 7 203 566 141 501 4.01e-67 233
Msa1330370 MtrunA17_Chr3g0098121 37.602 367 219 5 203 566 152 511 3.44e-66 231
Msa1330370 MtrunA17_Chr7g0236841 35.772 369 231 4 199 566 6 369 3.60e-66 223
Msa1330370 MtrunA17_Chr6g0461751 32.824 393 255 7 180 567 118 506 1.73e-65 224
Msa1330370 MtrunA17_Chr3g0095031 36.464 362 218 6 213 570 100 453 3.36e-65 224
Msa1330370 MtrunA17_Chr7g0263771 33.088 408 249 9 184 580 110 504 6.87e-65 224
Msa1330370 MtrunA17_Chr4g0040761 35.632 348 218 5 217 562 33 376 9.27e-61 216
Msa1330370 MtrunA17_Chr6g0475251 36.158 354 207 7 227 570 127 471 2.23e-58 208
Msa1330370 MtrunA17_Chr1g0204391 35.613 351 195 6 227 551 68 413 4.00e-58 205
Msa1330370 MtrunA17_Chr2g0329931 35.345 348 219 3 217 564 55 396 1.12e-57 199
Msa1330370 MtrunA17_Chr8g0342861 35.057 348 220 3 217 564 55 396 9.64e-57 197
Msa1330370 MtrunA17_Chr4g0070981 34.195 348 223 2 217 564 55 396 2.51e-56 196
Msa1330370 MtrunA17_Chr2g0299681 34.195 348 223 2 217 564 55 396 3.24e-56 196
Msa1330370 MtrunA17_Chr7g0247181 31.714 350 224 5 209 552 141 481 4.17e-54 192
Msa1330370 MtrunA17_Chr7g0247221 31.250 368 235 6 209 570 144 499 4.25e-54 192
Msa1330370 MtrunA17_Chr2g0310581 31.565 377 247 5 203 574 53 423 5.16e-54 192
Msa1330370 MtrunA17_Chr7g0247191 31.429 350 225 5 209 552 151 491 4.55e-53 190
Msa1330370 MtrunA17_Chr2g0301281 29.977 427 221 11 213 564 52 475 9.15e-51 185
Msa1330370 MtrunA17_Chr6g0466611 31.868 364 232 6 211 559 150 512 1.13e-50 187
Msa1330370 MtrunA17_Chr4g0029191 29.742 427 222 11 213 564 55 478 1.34e-50 185
Msa1330370 MtrunA17_Chr4g0062301 33.983 359 215 10 217 562 111 460 1.87e-50 184
Msa1330370 MtrunA17_Chr2g0307471 36.188 362 202 12 217 562 105 453 1.04e-49 181
Msa1330370 MtrunA17_Chr4g0003441 29.917 361 235 7 204 554 104 456 2.26e-49 179
Msa1330370 MtrunA17_Chr8g0347161 30.905 453 279 12 117 545 15 457 2.10e-47 175
Msa1330370 MtrunA17_Chr3g0114081 32.041 387 220 11 201 562 27 395 1.82e-46 173
Msa1330370 MtrunA17_Chr5g0443991 33.433 335 216 6 222 551 95 427 3.40e-44 168
Msa1330370 MtrunA17_Chr8g0347171 33.427 356 222 9 204 545 161 515 4.63e-44 167
Msa1330370 MtrunA17_Chr7g0236831 30.374 428 225 10 203 559 163 588 1.22e-43 167
Msa1330370 MtrunA17_Chr8g0347151 33.989 356 220 9 204 545 202 556 2.34e-43 165
Msa1330370 MtrunA17_Chr1g0149251 28.972 321 213 7 241 555 2 313 1.71e-42 156
Msa1330370 MtrunA17_Chr8g0386451 32.865 356 224 7 204 545 289 643 5.23e-42 162
Msa1330370 MtrunA17_Chr4g0034411 32.659 346 225 7 222 562 95 437 1.94e-41 160
Msa1330370 MtrunA17_Chr3g0145781 28.715 397 244 13 201 564 130 520 1.11e-37 147
Msa1330370 MtrunA17_Chr2g0309551 26.292 445 271 8 176 567 86 526 6.75e-37 145
Msa1330370 MtrunA17_Chr1g0179761 29.365 378 230 11 203 551 80 449 1.54e-35 140
Msa1330370 MtrunA17_Chr1g0192021 28.000 400 235 8 202 553 25 419 2.12e-35 141
Msa1330370 MtrunA17_Chr5g0429221 28.814 354 240 8 201 550 1 346 3.05e-33 132
Msa1330370 MtrunA17_Chr4g0074521 29.948 384 223 11 191 540 70 441 3.81e-30 124
Msa1330370 MtrunA17_Chr1g0169331 27.247 356 211 7 244 564 39 381 5.36e-28 116
Msa1330370 MtrunA17_Chr4g0004301 24.880 418 235 10 217 563 43 452 1.57e-26 113
Msa1330370 MtrunA17_Chr5g0434301 24.402 418 237 9 217 563 43 452 1.00e-25 111
Msa1330370 MtrunA17_Chr4g0039471 37.158 183 107 2 219 398 239 416 1.42e-25 109
Msa1330370 MtrunA17_Chr4g0039471 28.718 195 96 3 203 397 2 153 3.25e-16 81.3
Msa1330370 MtrunA17_Chr8g0342851 27.273 330 202 6 239 565 9 303 1.71e-25 107
Msa1330370 MtrunA17_Chr4g0062321 32.093 215 128 7 309 513 24 230 7.02e-23 98.2
Msa1330370 MtrunA17_Chr8g0354761 26.050 357 219 13 226 558 31 366 3.50e-22 100
Msa1330370 MtrunA17_Chr8g0349951 33.121 157 100 2 199 354 6 158 4.23e-22 93.2
Msa1330370 MtrunA17_Chr3g0137901 35.484 124 80 0 432 555 26 149 9.42e-22 93.2
Msa1330370 MtrunA17_Chr0c30g0494091 31.858 226 132 6 191 404 70 285 4.28e-20 92.8
Msa1330370 MtrunA17_Chr1g0155201 29.787 235 143 8 328 558 14 230 7.69e-17 82.4
Msa1330370 MtrunA17_Chr4g0025141 28.804 184 114 4 382 550 15 196 1.68e-16 79.3
Msa1330370 MtrunA17_Chr8g0364251 29.677 155 104 2 449 603 437 586 7.92e-16 80.9
Msa1330370 MtrunA17_Chr8g0364251 28.718 195 116 5 217 394 105 293 1.91e-14 76.6
Msa1330370 MtrunA17_Chr3g0137891 30.357 168 107 5 241 404 2 163 1.91e-15 76.3
Msa1330370 MtrunA17_Chr2g0300871 24.773 331 232 10 228 551 46 366 3.14e-15 79.3
Msa1330370 MtrunA17_Chr4g0025131 31.288 163 104 3 203 362 56 213 1.08e-13 72.0
Msa1330370 MtrunA17_Chr3g0108851 24.865 370 220 13 220 562 12 350 3.23e-13 73.2
Msa1330370 MtrunA17_Chr1g0171481 21.667 360 263 10 238 586 175 526 2.97e-12 69.3
Msa1330370 MtrunA17_Chr8g0377041 24.189 339 218 12 229 551 281 596 2.52e-11 67.0
Msa1330370 MtrunA17_Chr2g0277541 22.191 356 240 11 227 565 411 746 3.79e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330370 AT5G63120.2 76.230 488 114 1 141 626 104 591 0.0 749
Msa1330370 AT1G55150.1 71.800 461 122 1 143 595 40 500 0.0 707
Msa1330370 AT1G55150.2 71.800 461 122 1 143 595 65 525 0.0 705
Msa1330370 AT5G63120.1 79.784 371 75 0 141 511 104 474 0.0 624
Msa1330370 AT5G63120.3 79.784 371 75 0 141 511 104 474 0.0 623
Msa1330370 AT5G63120.4 79.784 371 75 0 141 511 104 474 0.0 623
Msa1330370 AT5G63120.5 79.784 371 75 0 141 511 104 474 0.0 623
Msa1330370 AT5G14610.5 55.448 413 175 4 184 592 151 558 6.67e-155 461
Msa1330370 AT5G14610.2 55.448 413 175 4 184 592 143 550 7.04e-155 461
Msa1330370 AT5G14610.6 55.448 413 175 4 184 592 143 550 7.05e-155 461
Msa1330370 AT3G01540.1 56.511 407 174 3 184 589 140 544 7.13e-154 457
Msa1330370 AT3G01540.4 56.511 407 174 3 184 589 140 544 7.20e-154 457
Msa1330370 AT3G01540.2 56.511 407 174 3 184 589 140 544 7.20e-154 457
Msa1330370 AT3G01540.3 56.511 407 174 3 184 589 140 544 7.20e-154 457
Msa1330370 AT5G14610.7 57.218 381 154 4 216 592 44 419 1.34e-147 437
Msa1330370 AT5G14610.3 57.218 381 154 4 216 592 44 419 1.34e-147 437
Msa1330370 AT3G06480.1 52.667 450 192 8 167 605 402 841 2.72e-147 454
Msa1330370 AT5G14610.1 55.198 404 167 5 198 592 220 618 2.66e-146 441
Msa1330370 AT1G20920.2 45.536 448 238 3 161 605 150 594 1.96e-135 416
Msa1330370 AT1G20920.4 45.536 448 238 3 161 605 488 932 1.34e-132 417
Msa1330370 AT1G20920.6 45.536 448 238 3 161 605 488 932 1.34e-132 417
Msa1330370 AT1G20920.3 45.536 448 238 3 161 605 488 932 1.34e-132 417
Msa1330370 AT1G20920.7 45.536 448 238 3 161 605 488 932 1.34e-132 417
Msa1330370 AT1G20920.5 45.536 448 238 3 161 605 488 932 1.34e-132 417
Msa1330370 AT1G20920.1 45.536 448 238 3 161 605 488 932 1.34e-132 417
Msa1330370 AT2G47330.1 47.307 427 222 3 161 585 187 612 2.38e-129 399
Msa1330370 AT5G14610.4 53.125 352 156 4 184 531 151 497 1.76e-124 377
Msa1330370 AT3G06480.2 53.482 359 154 6 167 520 402 752 4.18e-120 375
Msa1330370 AT1G31970.1 47.118 399 196 5 201 592 115 505 3.30e-118 362
Msa1330370 AT3G09620.1 43.304 448 219 4 161 605 355 770 9.51e-118 374
Msa1330370 AT3G09620.2 43.304 448 219 4 161 605 356 771 1.01e-117 374
Msa1330370 AT2G42520.2 42.984 449 235 7 157 587 113 558 1.51e-110 346
Msa1330370 AT2G42520.1 42.984 449 235 7 157 587 113 558 1.51e-110 346
Msa1330370 AT2G42520.3 42.984 449 235 7 157 587 113 558 1.51e-110 346
Msa1330370 AT3G58570.1 43.649 433 222 7 175 587 115 545 3.29e-110 345
Msa1330370 AT3G58510.1 43.243 444 225 8 182 609 129 561 2.78e-107 337
Msa1330370 AT3G58510.3 43.243 444 225 8 182 609 129 561 2.78e-107 337
Msa1330370 AT3G58510.2 43.243 444 225 8 182 609 129 561 2.78e-107 337
Msa1330370 AT2G33730.1 39.906 426 234 5 173 578 284 707 1.36e-95 310
Msa1330370 AT5G51280.1 39.198 449 257 7 173 609 117 561 4.14e-94 301
Msa1330370 AT4G33370.1 39.857 419 237 6 173 580 68 482 1.62e-92 296
Msa1330370 AT1G28180.1 40.741 351 200 3 232 578 3 349 9.74e-83 265
Msa1330370 AT3G22330.1 35.556 360 227 4 203 560 105 461 2.45e-69 237
Msa1330370 AT3G22310.2 39.009 323 192 4 227 547 141 460 1.20e-68 234
Msa1330370 AT3G22310.1 39.009 323 192 4 227 547 141 460 1.63e-68 234
Msa1330370 AT3G19760.1 35.561 374 233 4 190 562 23 389 1.72e-68 229
Msa1330370 AT5G26742.1 35.884 379 234 4 203 575 103 478 3.05e-67 234
Msa1330370 AT5G26742.2 35.884 379 234 4 203 575 103 478 3.09e-67 234
Msa1330370 AT3G02065.3 34.123 422 268 7 166 581 75 492 9.60e-67 227
Msa1330370 AT3G02065.2 34.123 422 268 7 166 581 75 492 9.60e-67 227
Msa1330370 AT5G60990.1 35.372 376 229 6 201 566 8 379 1.25e-65 223
Msa1330370 AT5G26742.3 36.585 369 220 6 213 575 25 385 1.37e-65 228
Msa1330370 AT3G09720.2 32.634 429 268 10 164 582 98 515 6.60e-65 223
Msa1330370 AT3G09720.1 32.634 429 268 10 164 582 98 515 6.60e-65 223
Msa1330370 AT1G51380.1 34.341 364 233 2 199 562 19 376 6.86e-64 216
Msa1330370 AT1G16280.1 36.436 376 217 9 209 575 65 427 1.29e-63 218
Msa1330370 AT4G16630.1 36.986 365 222 4 204 566 169 527 3.83e-61 218
Msa1330370 AT1G77030.1 34.699 366 223 6 204 562 30 386 6.40e-60 215
Msa1330370 AT5G62190.1 35.829 374 217 9 227 586 121 485 9.03e-59 209
Msa1330370 AT3G02065.1 35.014 357 223 6 231 581 2 355 1.13e-58 201
Msa1330370 AT3G13920.1 34.483 348 222 3 217 564 54 395 2.69e-57 199
Msa1330370 AT3G13920.4 34.593 344 219 3 221 564 53 390 3.59e-57 198
Msa1330370 AT3G13920.3 34.483 348 222 3 217 564 44 385 5.87e-57 197
Msa1330370 AT3G13920.2 34.604 341 217 3 217 557 54 388 1.10e-56 197
Msa1330370 AT3G13920.5 34.604 341 217 3 217 557 58 392 1.11e-56 197
Msa1330370 AT1G72730.1 34.393 346 221 3 217 562 56 395 1.19e-56 197
Msa1330370 AT1G54270.1 34.483 348 222 3 217 564 54 395 5.53e-56 195
Msa1330370 AT1G54270.2 33.718 347 218 4 221 564 53 390 9.25e-56 194
Msa1330370 AT4G00660.1 30.707 368 237 6 209 570 133 488 3.96e-55 196
Msa1330370 AT4G00660.2 30.707 368 237 6 209 570 133 488 3.96e-55 196
Msa1330370 AT5G65900.1 34.688 369 227 7 202 562 154 516 3.67e-54 196
Msa1330370 AT5G11170.1 30.376 372 245 6 192 555 31 396 2.25e-52 186
Msa1330370 AT5G11200.1 30.376 372 245 6 192 555 31 396 2.25e-52 186
Msa1330370 AT3G61240.2 30.280 393 245 8 179 552 84 466 3.05e-52 187
Msa1330370 AT3G61240.1 30.280 393 245 8 179 552 84 466 3.05e-52 187
Msa1330370 AT2G45810.1 29.820 389 251 7 174 552 120 496 1.97e-51 186
Msa1330370 AT3G18600.1 33.600 375 238 6 217 582 104 476 4.24e-50 183
Msa1330370 AT2G40700.1 29.095 464 242 13 185 564 7 467 5.86e-50 183
Msa1330370 AT5G08610.1 32.308 390 247 7 171 545 351 738 2.22e-48 182
Msa1330370 AT5G63630.2 33.429 347 214 8 214 545 260 604 6.73e-46 173
Msa1330370 AT5G54910.1 34.309 376 231 11 201 569 70 436 7.35e-46 174
Msa1330370 AT5G11200.3 28.087 413 242 9 192 555 31 437 8.24e-46 169
Msa1330370 AT5G08620.1 35.088 342 209 8 217 545 95 436 1.15e-45 171
Msa1330370 AT5G63630.1 33.333 345 217 7 214 545 66 410 1.35e-45 169
Msa1330370 AT4G09730.1 30.769 377 243 8 199 559 109 483 2.21e-45 171
Msa1330370 AT1G71370.1 32.546 381 231 11 197 559 9 381 3.75e-45 169
Msa1330370 AT5G11170.2 30.721 319 210 6 241 555 2 313 8.34e-45 163
Msa1330370 AT2G07750.1 29.652 489 312 12 82 545 251 732 1.53e-44 171
Msa1330370 AT1G63250.1 30.861 418 264 9 147 545 274 685 5.22e-44 169
Msa1330370 AT5G05450.1 32.143 392 222 12 202 559 9 390 6.48e-42 160
Msa1330370 AT1G12770.2 27.338 417 251 8 202 566 110 526 5.74e-39 151
Msa1330370 AT1G12770.1 27.338 417 251 8 202 566 110 526 5.74e-39 151
Msa1330370 AT3G53110.1 30.411 365 231 9 204 551 93 451 6.32e-39 150
Msa1330370 AT1G71280.2 31.546 317 168 11 215 515 27 310 5.91e-34 132
Msa1330370 AT3G16840.1 27.407 405 221 9 217 551 205 606 3.66e-33 136
Msa1330370 AT3G16840.2 27.407 405 221 9 217 551 206 607 3.67e-33 136
Msa1330370 AT5G19210.2 27.895 380 234 9 191 540 65 434 1.69e-32 131
Msa1330370 AT3G06980.1 27.638 398 244 12 202 564 374 762 3.95e-32 133
Msa1330370 AT1G71280.1 30.915 317 166 11 215 513 27 308 7.13e-32 129
Msa1330370 AT1G51380.2 32.231 242 159 1 199 440 19 255 7.35e-31 122
Msa1330370 AT4G34910.1 27.792 385 233 7 202 541 46 430 7.58e-31 128
Msa1330370 AT1G51380.4 33.962 212 135 1 199 410 19 225 4.48e-30 120
Msa1330370 AT1G51380.3 33.962 212 135 1 199 410 19 225 7.34e-30 120
Msa1330370 AT4G15850.1 25.059 427 243 11 217 575 46 463 2.60e-28 119
Msa1330370 AT5G11200.2 23.820 445 238 11 192 555 31 455 9.16e-25 108
Msa1330370 AT1G28180.2 46.847 111 56 1 234 341 5 115 1.12e-23 97.1
Msa1330370 AT1G59990.1 30.841 214 123 7 384 595 377 567 5.78e-19 91.3
Msa1330370 AT1G59990.1 27.570 214 117 7 221 415 99 293 5.58e-11 65.9
Msa1330370 AT1G59990.2 31.050 219 121 8 384 600 377 567 1.09e-18 90.5
Msa1330370 AT1G59990.2 27.570 214 117 7 221 415 99 293 3.80e-11 66.6
Msa1330370 AT2G28600.1 25.806 310 207 11 273 573 194 489 2.87e-16 82.4
Msa1330370 AT5G19210.1 25.738 237 147 6 328 540 46 277 5.61e-13 70.9
Msa1330370 AT5G19210.3 25.738 237 147 6 328 540 46 277 5.61e-13 70.9
Msa1330370 AT1G10930.1 23.529 340 227 10 227 551 456 777 6.47e-13 72.8
Msa1330370 AT1G31360.7 24.340 341 217 11 237 556 102 422 1.21e-12 71.2
Msa1330370 AT1G31360.8 24.340 341 217 11 237 556 102 422 1.93e-12 70.5
Msa1330370 AT1G31360.4 24.340 341 217 11 237 556 102 422 1.93e-12 70.5
Msa1330370 AT1G31360.6 24.340 341 217 11 237 556 102 422 6.40e-12 68.9
Msa1330370 AT1G31360.5 24.340 341 217 11 237 556 102 422 7.55e-12 68.6
Msa1330370 AT1G31360.3 24.340 341 217 11 237 556 136 456 1.03e-11 68.6
Msa1330370 AT4G35740.1 25.155 322 218 13 229 540 41 349 1.15e-11 68.6
Msa1330370 AT1G31360.1 24.340 341 217 11 237 556 102 422 1.66e-11 67.8

Find 244 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAAGAAGCTATGAAATT+TGG 0.103635 8_4:-49498377 Msa1330370:CDS
GCAATTCAAGTAACCTTATA+TGG 0.139876 8_4:+49497028 None:intergenic
ATGATCTTATAGGTAGTTAT+TGG 0.222969 8_4:-49496880 Msa1330370:intron
GGTTGGCCCATGGCCCTTAC+TGG 0.232248 8_4:-49498645 Msa1330370:CDS
GGAGGAAGAGGTGGTGGATT+TGG 0.260435 8_4:-49499058 Msa1330370:CDS
CAGTATAATGTCTGCCTATC+TGG 0.264324 8_4:+49497106 None:intergenic
GGCTGAAAGGGATTGGGTTT+TGG 0.272756 8_4:-49496552 Msa1330370:CDS
GGTGGTGGAGGTGGTGGTTT+TGG 0.280045 8_4:-49499217 Msa1330370:CDS
TAAATATCAGAGTATTTAAA+TGG 0.280753 8_4:+49495004 None:intergenic
CACATTAGTTGTTAGGTTAT+AGG 0.291906 8_4:-49495158 Msa1330370:three_prime_UTR
TGTTGAGCCTACTCCAATTC+AGG 0.295864 8_4:-49498673 Msa1330370:CDS
ACATCAGTGGCAGTCATTAT+TGG 0.300347 8_4:+49496506 None:intergenic
GATTGATTTGCTTTCAGATA+TGG 0.304818 8_4:+49496853 None:intergenic
GTTTACGGAAAAGCGCAATT+TGG 0.305112 8_4:+49499573 None:intergenic
TTTCAACATAGAAATTCTTC+TGG 0.307740 8_4:+49498957 None:intergenic
ATTTGAAATTCTAGGGTTTA+CGG 0.317871 8_4:+49499558 None:intergenic
TCCCATGCACCGACTGGTTT+CGG 0.319855 8_4:-49499310 Msa1330370:CDS
CTTACTGGTAGAGATTTAAT+TGG 0.321343 8_4:-49498630 Msa1330370:CDS
GAAACAACACATTAGTTGTT+AGG 0.324096 8_4:-49495165 Msa1330370:three_prime_UTR
TGATGGATTGGAATTGGATT+AGG 0.324209 8_4:+49499624 None:intergenic
GTTTCTGCACAACCCATATA+AGG 0.324637 8_4:-49497041 Msa1330370:intron
TTGACTCGGTCTGGTGGTTT+TGG 0.328515 8_4:-49495502 Msa1330370:CDS
GGGAGAGGTGGCGGTGGTAG+AGG 0.328614 8_4:-49499139 Msa1330370:CDS
GGCCAACCCTGGGCCTGAAT+TGG 0.330388 8_4:+49498660 None:intergenic
AACAAGAAGCTATGAAATTT+GGG 0.331542 8_4:-49498376 Msa1330370:CDS
TGAAAAGCGCGAATTGGTTT+CGG 0.332237 8_4:+49498851 None:intergenic
GGTTCATGATTTGAAATTCT+AGG 0.337320 8_4:+49499550 None:intergenic
GGCCAGTTCGACCAATTCTA+TGG 0.344136 8_4:+49495644 None:intergenic
AAATTATTCAATCAAGTATA+TGG 0.346453 8_4:-49494933 Msa1330370:three_prime_UTR
CCTATGCCGCCACCGAATTT+CGG 0.353222 8_4:-49499373 Msa1330370:CDS
GCCAGAGATTCAACCTCCTT+TGG 0.366169 8_4:+49497070 None:intergenic
GGTGGTGGCAGAGGAGGTAG+TGG 0.366462 8_4:-49499079 Msa1330370:CDS
GCCTCATGAAAAGCGCGAAT+TGG 0.367477 8_4:+49498845 None:intergenic
ATTAGATGTACATGCATATA+CGG 0.375422 8_4:-49498341 Msa1330370:CDS
CGAAAATTAGCAGGCCTTGT+AGG 0.376038 8_4:+49495048 None:intergenic
GGGCGTGGTGGGAGAGGTGG+CGG 0.377709 8_4:-49499148 Msa1330370:CDS
TCAGACATGGCTTGTATCAT+AGG 0.379354 8_4:+49498932 None:intergenic
GCGTGACCGTTGCTAAATCT+AGG 0.380163 8_4:+49499193 None:intergenic
TCGGGGCGTGGTGGGAGAGG+TGG 0.382206 8_4:-49499151 Msa1330370:CDS
GGGGAGGAGGCTATGGCAAT+CGG 0.382578 8_4:-49495355 Msa1330370:CDS
TTTCTGTAAATATTAGAATT+CGG 0.385220 8_4:+49496657 None:intergenic
GGTGGTAGAAAGTGAGGAAT+CGG 0.386406 8_4:+49499271 None:intergenic
GTGGTAGAAAGTGAGGAATC+GGG 0.387200 8_4:+49499272 None:intergenic
GGTCGTGGAGGTGGTGGCAG+AGG 0.390014 8_4:-49499088 Msa1330370:CDS
GAAGATTATGTCCATAGAAT+TGG 0.391639 8_4:-49495655 Msa1330370:CDS
GATGTTGCTGCACGGGGTCT+TGG 0.399031 8_4:-49496488 Msa1330370:intron
GGTAGTGGAGGAAGAGGTGG+TGG 0.399655 8_4:-49499064 Msa1330370:CDS
TGCCACTGATGTTGCTGCAC+GGG 0.400576 8_4:-49496495 Msa1330370:CDS
GGCAATCGGGGTTCAACATC+AGG 0.400719 8_4:-49495341 Msa1330370:CDS
TGATCTTATAGGTAGTTATT+GGG 0.401679 8_4:-49496879 Msa1330370:intron
AGTGATAGAAAGTATGATTC+GGG 0.403125 8_4:-49499169 Msa1330370:CDS
AAATGTCAGCTTGCAATTTG+TGG 0.405046 8_4:+49494730 None:intergenic
GTCCATAGAATTGGTCGAAC+TGG 0.405693 8_4:-49495646 Msa1330370:CDS
AGAGGAGGTAGTGGAGGAAG+AGG 0.405707 8_4:-49499070 Msa1330370:CDS
GGGAGGAGGCTATGGCAATC+GGG 0.408399 8_4:-49495354 Msa1330370:CDS
CAAAACAAGTACCCATTCTA+AGG 0.411090 8_4:+49498288 None:intergenic
AATTATAATGTATATTTGAC+AGG 0.413002 8_4:+49494793 None:intergenic
TTAATTGGCATTGCTGAGAC+TGG 0.418887 8_4:-49498615 Msa1330370:CDS
AGGTAGACATGGATCTTCTA+AGG 0.420828 8_4:-49499035 Msa1330370:CDS
CTTGACGTTATTGCCAAGTT+GGG 0.421179 8_4:-49498699 Msa1330370:CDS
TCACGGATTTGAGGGCCCTT+TGG 0.421284 8_4:+49498311 None:intergenic
ATAGGTCGCGGTGGTGGAGG+TGG 0.424517 8_4:-49499226 Msa1330370:CDS
AAATTTCTAAAATCTTGCTT+TGG 0.427795 8_4:+49498989 None:intergenic
AAAACCAGGCTGAAAGGGAT+TGG 0.429970 8_4:-49496559 Msa1330370:CDS
GGACCGCCACGGCCGAAATT+CGG 0.431899 8_4:+49499361 None:intergenic
CGTGGTGGGAGAGGTGGCGG+TGG 0.435065 8_4:-49499145 Msa1330370:CDS
GGAAGAGGTGGTGGATTTGG+AGG 0.435514 8_4:-49499055 Msa1330370:CDS
GCCAAAGGAGGTTGAATCTC+TGG 0.435658 8_4:-49497071 Msa1330370:CDS
AAGTGAGGAATCGGGGTAAC+CGG 0.435767 8_4:+49499280 None:intergenic
TTCTCGATTTCAGGAGTACA+AGG 0.438462 8_4:-49494825 Msa1330370:three_prime_UTR
TTCTCAATTGTCTAGTAACT+TGG 0.441433 8_4:+49496618 None:intergenic
ACATAATCTTCGAGGCTTGA+AGG 0.443462 8_4:+49495667 None:intergenic
TTCTAAGGTCACGGATTTGA+GGG 0.447319 8_4:+49498303 None:intergenic
GGTGGCAGAGGTCGTGGAGG+TGG 0.447632 8_4:-49499097 Msa1330370:CDS
CCGAAATTCGGTGGCGGCAT+AGG 0.447928 8_4:+49499373 None:intergenic
GATTGATGCATGTAATTAGT+TGG 0.450006 8_4:-49495076 Msa1330370:three_prime_UTR
GATTCGGGGCGTGGTGGGAG+AGG 0.450988 8_4:-49499154 Msa1330370:CDS
CTACCACCTCCTGGAGGAGG+TGG 0.451008 8_4:-49499256 Msa1330370:CDS
CAATTCAAGTAACCTTATAT+GGG 0.452087 8_4:+49497029 None:intergenic
AGCATAGGTCGCGGTGGTGG+AGG 0.453503 8_4:-49499229 Msa1330370:CDS
GGCAGAGGTCGTGGAGGTGG+TGG 0.453978 8_4:-49499094 Msa1330370:CDS
TTATGCAGTACCGTGCTAGT+AGG 0.456035 8_4:-49498901 Msa1330370:CDS
ATTAAGATCTTACAAGATGC+TGG 0.456323 8_4:-49495553 Msa1330370:CDS
GGTGCTAAAACCAGGACAAC+AGG 0.456527 8_4:+49498425 None:intergenic
TTTAGTGGTGGCAGAGGTCG+TGG 0.456653 8_4:-49499103 Msa1330370:CDS
CCTTGACGTTATTGCCAAGT+TGG 0.463868 8_4:-49498700 Msa1330370:CDS
GTTCATGATTTGAAATTCTA+GGG 0.464348 8_4:+49499551 None:intergenic
AGGAGAAGGTCCTGTTGTCC+TGG 0.464506 8_4:-49498435 Msa1330370:CDS
TGAACAGCTAACTCTCTAGT+TGG 0.465714 8_4:+49498404 None:intergenic
TTCTATGGACATAATCTTCG+AGG 0.465879 8_4:+49495659 None:intergenic
CGTGGAGGTGGTGGCAGAGG+AGG 0.465935 8_4:-49499085 Msa1330370:CDS
GGTCGCGGTGGTGGAGGTGG+TGG 0.467309 8_4:-49499223 Msa1330370:CDS
CCGACATGGAGAAATATAAC+AGG 0.468600 8_4:-49496804 Msa1330370:intron
GAGTGATAGAAAGTATGATT+CGG 0.470370 8_4:-49499170 Msa1330370:CDS
CAATTAAATCTCTACCAGTA+AGG 0.470567 8_4:+49498631 None:intergenic
TTGTCTGCATTGACTCGGTC+TGG 0.471301 8_4:-49495511 Msa1330370:CDS
GTCAGTGCACAACCTCGATT+AGG 0.471382 8_4:-49498549 Msa1330370:intron
CGCTCAAGAGGACGAGGAGG+GGG 0.471505 8_4:-49495374 Msa1330370:CDS
TCAAATCCGTGACCTTAGAA+TGG 0.471655 8_4:-49498300 Msa1330370:CDS
AAACCAGGCTGAAAGGGATT+GGG 0.473605 8_4:-49496558 Msa1330370:CDS
GGTGGCAGAGGAGGTAGTGG+AGG 0.474284 8_4:-49499076 Msa1330370:CDS
GTGCTAATGCGAAGTATGCT+AGG 0.475882 8_4:-49495582 Msa1330370:CDS
CTGTAGGCGGGAAGAGGCCG+TGG 0.476144 8_4:-49495304 Msa1330370:CDS
GGAAGAGGCCGTGGCAGTCT+AGG 0.477862 8_4:-49495295 Msa1330370:CDS
GTCGGTGCATGGGATGCATA+TGG 0.479219 8_4:+49499319 None:intergenic
GGAGGTAGTGGAGGAAGAGG+TGG 0.480241 8_4:-49499067 Msa1330370:CDS
CCTCACTTTCTACCACCTCC+TGG 0.486301 8_4:-49499265 Msa1330370:CDS
ATTGGTCGAACTGGCCGTGC+AGG 0.487346 8_4:-49495637 Msa1330370:CDS
ATCCGAAACCAGTCGGTGCA+TGG 0.490072 8_4:+49499308 None:intergenic
AGTAGGGATATTACAGTTGA+AGG 0.491737 8_4:-49498884 Msa1330370:CDS
AGAAAGTATGATTCGGGGCG+TGG 0.492871 8_4:-49499163 Msa1330370:CDS
AATAACAGATTCGGCCAGAT+AGG 0.493995 8_4:-49497120 Msa1330370:intron
TAAGGGCCATGGGCCAACCC+TGG 0.495436 8_4:+49498649 None:intergenic
CAGATAGGCAGACATTATAC+TGG 0.496676 8_4:-49497105 Msa1330370:CDS
GACTGGTTTCGGATCAGCTC+CGG 0.499525 8_4:-49499299 Msa1330370:CDS
CTGCCACTGATGTTGCTGCA+CGG 0.505670 8_4:-49496496 Msa1330370:CDS
TGTTGTTTCAAATGTAATGC+TGG 0.506520 8_4:+49495179 None:intergenic
TCAGGCCCAGGGTTGGCCCA+TGG 0.508684 8_4:-49498655 Msa1330370:CDS
CGAAATCGAGAGTTCATCCT+AGG 0.510374 8_4:+49494866 None:intergenic
GGAGGAGGCTATGGCAATCG+GGG 0.512023 8_4:-49495353 Msa1330370:CDS
CCTCTTCCCGCCTACAGGAA+TGG 0.512401 8_4:+49495310 None:intergenic
CTTGTTTCTTGCAGATGTGA+AGG 0.512845 8_4:-49495719 Msa1330370:intron
AAGGGCCATGGGCCAACCCT+GGG 0.514309 8_4:+49498650 None:intergenic
CATATACGGTGGTGCTCCAA+AGG 0.514954 8_4:-49498327 Msa1330370:CDS
CCCGCCTACAGGAATGGCAT+TGG 0.517418 8_4:+49495316 None:intergenic
CTCCAATTCAGGCCCAGGGT+TGG 0.518232 8_4:-49498662 Msa1330370:CDS
AAACCCAATCCCTTTCAGCC+TGG 0.518944 8_4:+49496555 None:intergenic
ACTGGCCGTGCAGGAGCTAA+AGG 0.522437 8_4:-49495628 Msa1330370:CDS
GGCATTGCTGAGACTGGCTC+GGG 0.522658 8_4:-49498609 Msa1330370:CDS
AGGCTCAACAAAACCCAACT+TGG 0.523038 8_4:+49498686 None:intergenic
CTGATATTTAACTGACAGCC+AGG 0.523043 8_4:-49494991 Msa1330370:three_prime_UTR
GGAGCAGCACCGTACGGAGC+AGG 0.523763 8_4:+49499340 None:intergenic
TTTAGCATAGGTCGCGGTGG+TGG 0.525234 8_4:-49499232 Msa1330370:CDS
ATTCTAAGGTCACGGATTTG+AGG 0.525683 8_4:+49498302 None:intergenic
TCAGCTTGCAATTTGTGGAT+TGG 0.526384 8_4:+49494735 None:intergenic
CTGCATTGTCTGCATTGACT+CGG 0.529035 8_4:-49495516 Msa1330370:CDS
ATCTCTACCAGTAAGGGCCA+TGG 0.529669 8_4:+49498638 None:intergenic
ACATAGAAATTCTTCTGGAA+AGG 0.530784 8_4:+49498962 None:intergenic
TGGCATTGCTGAGACTGGCT+CGG 0.531480 8_4:-49498610 Msa1330370:CDS
CAAATCCGTGACCTTAGAAT+GGG 0.531829 8_4:-49498299 Msa1330370:intron
TATGCAGTACCGTGCTAGTA+GGG 0.531896 8_4:-49498900 Msa1330370:CDS
TATTGTTGTAGTGATCTCGT+TGG 0.532861 8_4:-49499397 Msa1330370:intron
CTCTAGTTGGTGCTAAAACC+AGG 0.533042 8_4:+49498417 None:intergenic
TCGGAGTATCTATTGTCGTA+AGG 0.536289 8_4:+49499528 None:intergenic
GCGACGGCCGCGAAAAGAAG+TGG 0.538386 8_4:+49499503 None:intergenic
CTAACAATTCGAAAATTAGC+AGG 0.538839 8_4:+49495039 None:intergenic
CCGCCACCGAATTTCGGCCG+TGG 0.541404 8_4:-49499367 Msa1330370:CDS
AGAGGTGGCGGTGGTAGAGG+CGG 0.544364 8_4:-49499136 Msa1330370:CDS
GAGAGTGACGTACCTTGTCT+TGG 0.546399 8_4:-49498109 Msa1330370:CDS
GCCACTGATGTTGCTGCACG+GGG 0.547335 8_4:-49496494 Msa1330370:CDS
TTCGCTCAAGAGGACGAGGA+GGG 0.549664 8_4:-49495376 Msa1330370:CDS
GCCGTGGCAGTCTAGGTAGT+TGG 0.552410 8_4:-49495288 Msa1330370:exon
TTTCTACCACCTCCTGGAGG+AGG 0.553331 8_4:-49499259 Msa1330370:CDS
GCCGCGAAAAGAAGTGGAAT+CGG 0.553368 8_4:+49499509 None:intergenic
TATGCATCCCATGCACCGAC+TGG 0.553730 8_4:-49499316 Msa1330370:CDS
CGTGACCGTTGCTAAATCTA+GGG 0.554429 8_4:+49499194 None:intergenic
AGCATACTTCGCATTAGCAC+TGG 0.556257 8_4:+49495585 None:intergenic
TATCAGAGTATTTAAATGGT+GGG 0.557333 8_4:+49495008 None:intergenic
ATGCTAAATCCACCTCCTCC+AGG 0.557833 8_4:+49499247 None:intergenic
TGCTGAAAGAAGTGATGGAT+GGG 0.558844 8_4:-49496682 Msa1330370:CDS
TGGTCGTCTAATAGATATGT+TGG 0.560577 8_4:-49498154 Msa1330370:CDS
AGTTACTAGACAATTGAGAA+TGG 0.560588 8_4:-49496615 Msa1330370:CDS
CGGAGTATCTATTGTCGTAA+GGG 0.560960 8_4:+49499529 None:intergenic
AATCCACCTCCTCCAGGAGG+TGG 0.563496 8_4:+49499253 None:intergenic
GGTGGTAGAGGCGGAACTCA+CGG 0.563845 8_4:-49499127 Msa1330370:CDS
TCCGAAACCAGTCGGTGCAT+GGG 0.565286 8_4:+49499309 None:intergenic
CAAGGTACGTCACTCTCTGC+AGG 0.565372 8_4:+49498115 None:intergenic
GATTCGGAAGATTGTAAACC+AGG 0.567154 8_4:-49498046 Msa1330370:intron
ACTAGACAATTGAGAATGGA+TGG 0.567496 8_4:-49496611 Msa1330370:CDS
TGTTGAAGTTGTCACCGACA+TGG 0.570666 8_4:-49496818 Msa1330370:CDS
CCAATGCCATTCCTGTAGGC+GGG 0.574808 8_4:-49495316 Msa1330370:CDS
GCACTGACATGAACTATAGC+AGG 0.576419 8_4:+49498564 None:intergenic
AAGTATGATTCGGGGCGTGG+TGG 0.576737 8_4:-49499160 Msa1330370:CDS
ATGTCGCAGAGAATGACTCC+TGG 0.577876 8_4:+49494973 None:intergenic
CGTGGCGGTCCTGCTCCGTA+CGG 0.578290 8_4:-49499349 Msa1330370:CDS
ATATCAGAGTATTTAAATGG+TGG 0.579668 8_4:+49495007 None:intergenic
GTAGGGATATTACAGTTGAA+GGG 0.580713 8_4:-49498883 Msa1330370:CDS
AGGGGAGGCTTTCGCTCAAG+AGG 0.581792 8_4:-49495386 Msa1330370:CDS
CGAGTCAATGCAGACAATGC+AGG 0.583790 8_4:+49495517 None:intergenic
GACAATTGAGAATGGATGGA+TGG 0.585488 8_4:-49496607 Msa1330370:CDS
AATTAAATCTCTACCAGTAA+GGG 0.585533 8_4:+49498632 None:intergenic
AAGTACCCATTCTAAGGTCA+CGG 0.586034 8_4:+49498294 None:intergenic
CATAACTTGCTGATCAGACA+TGG 0.586060 8_4:+49498919 None:intergenic
TTTACAATCTTCCGAATCTG+AGG 0.586114 8_4:+49498051 None:intergenic
CTGCTGAAAGAAGTGATGGA+TGG 0.587961 8_4:-49496683 Msa1330370:CDS
TCCAATGCCATTCCTGTAGG+CGG 0.588440 8_4:-49495317 Msa1330370:CDS
CAATTTGGATTTGAAGTGTG+AGG 0.589391 8_4:+49499588 None:intergenic
TCTCTACCAGTAAGGGCCAT+GGG 0.591610 8_4:+49498639 None:intergenic
TCACCATGGATGGATAATGC+TGG 0.591983 8_4:+49496584 None:intergenic
GCATATGGAGCAGCACCGTA+CGG 0.592754 8_4:+49499334 None:intergenic
CCACGGCCGAAATTCGGTGG+CGG 0.596508 8_4:+49499367 None:intergenic
CCTGTTATATTTCTCCATGT+CGG 0.596823 8_4:+49496804 None:intergenic
TGCTAATGCGAAGTATGCTA+GGG 0.597366 8_4:-49495581 Msa1330370:CDS
CAAGCTGCTGAAAGAAGTGA+TGG 0.597968 8_4:-49496687 Msa1330370:CDS
CATTATACTGGAGTGCAACA+TGG 0.598650 8_4:-49497093 Msa1330370:CDS
TCTGCATTGACTCGGTCTGG+TGG 0.599702 8_4:-49495508 Msa1330370:CDS
GGTGGATTTGGAGGTAGACA+TGG 0.601184 8_4:-49499046 Msa1330370:CDS
GGATCCAATGCCATTCCTGT+AGG 0.601289 8_4:-49495320 Msa1330370:CDS
TGGCCAGCATTATCCATCCA+TGG 0.603004 8_4:-49496587 Msa1330370:CDS
TGGTAGAAAGTGAGGAATCG+GGG 0.605030 8_4:+49499273 None:intergenic
CCCTGGGCCTGAATTGGAGT+AGG 0.605999 8_4:+49498666 None:intergenic
AACATATCTATTAGACGACC+AGG 0.606282 8_4:+49498156 None:intergenic
GCGACATCAAAAGTTGCAGT+TGG 0.606693 8_4:-49494957 Msa1330370:three_prime_UTR
AAGCTATGAAATTTGGGTCA+CGG 0.606701 8_4:-49498370 Msa1330370:CDS
TTTCGCTCAAGAGGACGAGG+AGG 0.608698 8_4:-49495377 Msa1330370:CDS
GGATGAAGCTGATCGAATGT+TGG 0.611304 8_4:-49498088 Msa1330370:CDS
CCAGGAGGTGGTAGAAAGTG+AGG 0.612192 8_4:+49499265 None:intergenic
CTGGAGTGCAACATGGCCAA+AGG 0.612948 8_4:-49497086 Msa1330370:CDS
GAGATTGTTATAGCTACACC+TGG 0.612981 8_4:-49498174 Msa1330370:CDS
CTGTAATATCCCTACTAGCA+CGG 0.614529 8_4:+49498891 None:intergenic
ATATACGGTGGTGCTCCAAA+GGG 0.615018 8_4:-49498326 Msa1330370:CDS
AGTATGATTCGGGGCGTGGT+GGG 0.615854 8_4:-49499159 Msa1330370:CDS
GGAGGAGGTGGATTTAGCAT+AGG 0.616493 8_4:-49499244 Msa1330370:CDS
TTTAAATACATACCTAATCG+AGG 0.619870 8_4:+49498537 None:intergenic
ATTAGTTGGAGTGACCTACA+AGG 0.620882 8_4:-49495062 Msa1330370:three_prime_UTR
AGCTGATCGAATGTTGGACA+TGG 0.623202 8_4:-49498082 Msa1330370:CDS
AATTGCATTACCTCACACTC+AGG 0.625887 8_4:+49494644 None:intergenic
AGGAGGTTGAATCTCTGGCA+AGG 0.627517 8_4:-49497066 Msa1330370:CDS
ACCCCGTGCAGCAACATCAG+TGG 0.632963 8_4:+49496493 None:intergenic
CGTACGGAGCAGGACCGCCA+CGG 0.634316 8_4:+49499350 None:intergenic
TCGCTCAAGAGGACGAGGAG+GGG 0.640661 8_4:-49495375 Msa1330370:CDS
ATTACATATACCTGAGTGTG+AGG 0.642727 8_4:-49494654 Msa1330370:three_prime_UTR
TTTGGCCCTAGATTTAGCAA+CGG 0.644669 8_4:-49499199 Msa1330370:CDS
CCTACTCCAATTCAGGCCCA+GGG 0.644728 8_4:-49498666 Msa1330370:CDS
CAGTTCCTTTAGCTCCTGCA+CGG 0.646694 8_4:+49495623 None:intergenic
GGTGGATTTAGCATAGGTCG+CGG 0.647178 8_4:-49499238 Msa1330370:CDS
GAGTGCAACATGGCCAAAGG+AGG 0.647714 8_4:-49497083 Msa1330370:CDS
TCTCGATTTCAGGAGTACAA+GGG 0.650073 8_4:-49494824 Msa1330370:three_prime_UTR
GTACTGAGATTCATTCAAAG+TGG 0.650303 8_4:-49499669 Msa1330370:five_prime_UTR
GGAGCTGATCCGAAACCAGT+CGG 0.669417 8_4:+49499301 None:intergenic
CCAACTTGGCAATAACGTCA+AGG 0.678011 8_4:+49498700 None:intergenic
AGTGGTGGCAGAGGTCGTGG+AGG 0.678452 8_4:-49499100 Msa1330370:CDS
GAAAACGAAAGTACCTGCGA+CGG 0.684293 8_4:+49499487 None:intergenic
CACTTTCTACCACCTCCTGG+AGG 0.684826 8_4:-49499262 Msa1330370:CDS
GGATTTAGCATAGGTCGCGG+TGG 0.685802 8_4:-49499235 Msa1330370:CDS
TTATTCAATCAAGTATATGG+AGG 0.693958 8_4:-49494930 Msa1330370:three_prime_UTR
GCTGATCGAATGTTGGACAT+GGG 0.696114 8_4:-49498081 Msa1330370:CDS
CTAAATCCACCTCCTCCAGG+AGG 0.697313 8_4:+49499250 None:intergenic
GATCAGCTTCATCCAAGACA+AGG 0.709890 8_4:+49498097 None:intergenic
GTGATAGAAAGTATGATTCG+GGG 0.711947 8_4:-49499168 Msa1330370:CDS
TGTGAAGGACATAAAATGTG+TGG 0.718356 8_4:-49495704 Msa1330370:CDS
AGATGTACATGCATATACGG+TGG 0.724908 8_4:-49498338 Msa1330370:CDS
ACCAACTACCTAGACTGCCA+CGG 0.728218 8_4:+49495287 None:intergenic
TCTAGTGACTGAAGTCAACG+AGG 0.742622 8_4:-49495113 Msa1330370:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATCATTTATTAGAATAAT+TGG - chr8_4:49494785-49494804 Msa1330370:three_prime_UTR 10.0%
!!! TTTTTCATTTAAATCAAATT+TGG - chr8_4:49496988-49497007 Msa1330370:intron 10.0%
!!! CATATAGGTTTTAATTTTAT+CGG - chr8_4:49495732-49495751 Msa1330370:intron 15.0%
!! TTTCTGTAAATATTAGAATT+CGG + chr8_4:49497572-49497591 None:intergenic 15.0%
!! AATATTTACAGAAACAAAAA+AGG - chr8_4:49497578-49497597 Msa1330370:intron 15.0%
!! ATATTTACAGAAACAAAAAA+GGG - chr8_4:49497579-49497598 Msa1330370:intron 15.0%
!!! TAAATATCAGAGTATTTAAA+TGG + chr8_4:49499225-49499244 None:intergenic 15.0%
!! AAATTATTCAATCAAGTATA+TGG - chr8_4:49499293-49499312 Msa1330370:CDS 15.0%
!! AATTATAATGTATATTTGAC+AGG + chr8_4:49499436-49499455 None:intergenic 15.0%
!!! TATGTTAAATTAGTTTTCTT+GGG + chr8_4:49499548-49499567 None:intergenic 15.0%
!!! ATATGTTAAATTAGTTTTCT+TGG + chr8_4:49499549-49499568 None:intergenic 15.0%
!!! AAATTTCTAAAATCTTGCTT+TGG + chr8_4:49495240-49495259 None:intergenic 20.0%
!!! AAAGCAAGATTTTAGAAATT+TGG - chr8_4:49495239-49495258 Msa1330370:three_prime_UTR 20.0%
!! AATGAATAAATACAAACACA+AGG + chr8_4:49495443-49495462 None:intergenic 20.0%
!! TATGGTCAAAAAATTAAACA+GGG + chr8_4:49495716-49495735 None:intergenic 20.0%
!! ATATGGTCAAAAAATTAAAC+AGG + chr8_4:49495717-49495736 None:intergenic 20.0%
!!! GTTTAATTTTTTGACCATAT+AGG - chr8_4:49495717-49495736 Msa1330370:intron 20.0%
!! CGATAAAATTAAAACCTATA+TGG + chr8_4:49495734-49495753 None:intergenic 20.0%
!! AATATTGATCAATATTGAAC+AGG + chr8_4:49495983-49496002 None:intergenic 20.0%
!! TTCAATATTGATCAATATTG+TGG - chr8_4:49495984-49496003 Msa1330370:intron 20.0%
!! TAATAAAATATGCAGAAAAG+AGG - chr8_4:49496319-49496338 Msa1330370:intron 20.0%
!! AATAAAATATGCAGAAAAGA+GGG - chr8_4:49496320-49496339 Msa1330370:intron 20.0%
!!! AAAAGTGTATATGTTATAAC+TGG - chr8_4:49496807-49496826 Msa1330370:CDS 20.0%
!! AAAGTGTATATGTTATAACT+GGG - chr8_4:49496808-49496827 Msa1330370:CDS 20.0%
!!! ATGAAAGTATACATATGAAT+CGG + chr8_4:49497228-49497247 None:intergenic 20.0%
!!! TAAATCTAGAACTTAACAAT+AGG - chr8_4:49497800-49497819 Msa1330370:intron 20.0%
!!! ATACATACTTTGTTGATAAT+TGG - chr8_4:49498309-49498328 Msa1330370:CDS 20.0%
!!! ATGTTAAATTAGTTTTCTTG+GGG + chr8_4:49499547-49499566 None:intergenic 20.0%
!!! TATGATGAATTTTGATGGAT+TGG + chr8_4:49494617-49494636 None:intergenic 25.0%
!!! ATTTGAAATTCTAGGGTTTA+CGG + chr8_4:49494671-49494690 None:intergenic 25.0%
!! GTTCATGATTTGAAATTCTA+GGG + chr8_4:49494678-49494697 None:intergenic 25.0%
! TTTCAACATAGAAATTCTTC+TGG + chr8_4:49495272-49495291 None:intergenic 25.0%
! AATTAAATCTCTACCAGTAA+GGG + chr8_4:49495597-49495616 None:intergenic 25.0%
! TTTAAATACATACCTAATCG+AGG + chr8_4:49495692-49495711 None:intergenic 25.0%
!!! ATAGGTTTTAATTTTATCGG+TGG - chr8_4:49495735-49495754 Msa1330370:intron 25.0%
! AACAAGAAGCTATGAAATTT+GGG - chr8_4:49495850-49495869 Msa1330370:intron 25.0%
! ATTAGATGTACATGCATATA+CGG - chr8_4:49495885-49495904 Msa1330370:intron 25.0%
! TGACAAATGAATCAAATTCT+AGG + chr8_4:49496255-49496274 None:intergenic 25.0%
! TAATGAAAGAAATTCCTTAG+AGG + chr8_4:49496496-49496515 None:intergenic 25.0%
! ATATCTAATTACTTCAGTTG+AGG - chr8_4:49496534-49496553 Msa1330370:CDS 25.0%
! TAGGTAGAAATTATCCTATT+AGG - chr8_4:49496776-49496795 Msa1330370:intron 25.0%
!! ACTTTTAATAGTGTCCTAAT+AGG + chr8_4:49496793-49496812 None:intergenic 25.0%
! TACAATTAATCAGTTACGTT+TGG - chr8_4:49497072-49497091 Msa1330370:CDS 25.0%
!!! GTGTTTTGAAATAACAGATT+CGG - chr8_4:49497097-49497116 Msa1330370:CDS 25.0%
! CAATTCAAGTAACCTTATAT+GGG + chr8_4:49497200-49497219 None:intergenic 25.0%
!! TGAAAGTATACATATGAATC+GGG + chr8_4:49497227-49497246 None:intergenic 25.0%
! ATGATCTTATAGGTAGTTAT+TGG - chr8_4:49497346-49497365 Msa1330370:intron 25.0%
! TGATCTTATAGGTAGTTATT+GGG - chr8_4:49497347-49497366 Msa1330370:intron 25.0%
!!! GCAACATCAAAGTTTTAATT+TGG + chr8_4:49497505-49497524 None:intergenic 25.0%
! TATAACTTGACATCTTTAAG+AGG + chr8_4:49498003-49498022 None:intergenic 25.0%
! CTTAAAGATGTCAAGTTATA+TGG - chr8_4:49498003-49498022 Msa1330370:intron 25.0%
! GAAACAAGTAAAACATCATA+AGG + chr8_4:49498495-49498514 None:intergenic 25.0%
!! AAACGTGAGTATTTTCTTTT+TGG - chr8_4:49498780-49498799 Msa1330370:intron 25.0%
!! CTAGTTAAAAAGTATGTATC+TGG + chr8_4:49499011-49499030 None:intergenic 25.0%
!! TATCAGAGTATTTAAATGGT+GGG + chr8_4:49499221-49499240 None:intergenic 25.0%
!! ATATCAGAGTATTTAAATGG+TGG + chr8_4:49499222-49499241 None:intergenic 25.0%
! TTATTCAATCAAGTATATGG+AGG - chr8_4:49499296-49499315 Msa1330370:CDS 25.0%
!!! ATGGAGGTAAGTTTTTATTT+TGG - chr8_4:49499312-49499331 Msa1330370:CDS 25.0%
!! TTTGGCTAATCACATTTTAA+AGG - chr8_4:49499330-49499349 Msa1330370:CDS 25.0%
!!! GAATTTTGATGGATTGGAAT+TGG + chr8_4:49494611-49494630 None:intergenic 30.0%
! GAGGATATGATGAATTTTGA+TGG + chr8_4:49494622-49494641 None:intergenic 30.0%
! GGTTCATGATTTGAAATTCT+AGG + chr8_4:49494679-49494698 None:intergenic 30.0%
! GAGTGATAGAAAGTATGATT+CGG - chr8_4:49495056-49495075 Msa1330370:three_prime_UTR 30.0%
! AGTGATAGAAAGTATGATTC+GGG - chr8_4:49495057-49495076 Msa1330370:three_prime_UTR 30.0%
! ACATAGAAATTCTTCTGGAA+AGG + chr8_4:49495267-49495286 None:intergenic 30.0%
ATGAAGACAAACAAAATACC+AGG + chr8_4:49495414-49495433 None:intergenic 30.0%
CAATTAAATCTCTACCAGTA+AGG + chr8_4:49495598-49495617 None:intergenic 30.0%
CTTACTGGTAGAGATTTAAT+TGG - chr8_4:49495596-49495615 Msa1330370:CDS 30.0%
!!! TTTGCTGTTTTTTCAGTACA+AGG - chr8_4:49495771-49495790 Msa1330370:intron 30.0%
CAACAAGAAGCTATGAAATT+TGG - chr8_4:49495849-49495868 Msa1330370:intron 30.0%
! TTTTGCCTTTACATAACTGA+AGG - chr8_4:49495956-49495975 Msa1330370:intron 30.0%
TTCATTTGTCATGTTTCTTC+TGG - chr8_4:49496264-49496283 Msa1330370:intron 30.0%
CACTTCTGAATTGAAAGAAA+GGG + chr8_4:49496453-49496472 None:intergenic 30.0%
AAGTTCCATTTGCAATCTTA+GGG + chr8_4:49496854-49496873 None:intergenic 30.0%
AAAGTTCCATTTGCAATCTT+AGG + chr8_4:49496855-49496874 None:intergenic 30.0%
!!! TAAGTTGTCGATTTTCACTT+GGG + chr8_4:49496909-49496928 None:intergenic 30.0%
!!! TTAAGTTGTCGATTTTCACT+TGG + chr8_4:49496910-49496929 None:intergenic 30.0%
AATTAATCAGTTACGTTTGG+TGG - chr8_4:49497075-49497094 Msa1330370:CDS 30.0%
GCAATTCAAGTAACCTTATA+TGG + chr8_4:49497201-49497220 None:intergenic 30.0%
GGCTTATTTAAACCTCATTT+AGG - chr8_4:49497288-49497307 Msa1330370:intron 30.0%
GATCAATAATCACCTAAATG+AGG + chr8_4:49497303-49497322 None:intergenic 30.0%
TTGATCAGTGTATTTCATTG+TGG - chr8_4:49497317-49497336 Msa1330370:intron 30.0%
TGATCAGTGTATTTCATTGT+GGG - chr8_4:49497318-49497337 Msa1330370:intron 30.0%
!! GATTGATTTGCTTTCAGATA+TGG + chr8_4:49497376-49497395 None:intergenic 30.0%
TTCTCAATTGTCTAGTAACT+TGG + chr8_4:49497611-49497630 None:intergenic 30.0%
AGTTACTAGACAATTGAGAA+TGG - chr8_4:49497611-49497630 Msa1330370:intron 30.0%
AAACCACAAATTGTTGTCAA+GGG + chr8_4:49497852-49497871 None:intergenic 30.0%
TGAAATACAGGATCATACAT+GGG + chr8_4:49498099-49498118 None:intergenic 30.0%
ATGTATGATCCTGTATTTCA+CGG - chr8_4:49498099-49498118 Msa1330370:CDS 30.0%
TTTACTTGCTTGACAAAACA+AGG - chr8_4:49498142-49498161 Msa1330370:CDS 30.0%
GAAGATTATGTCCATAGAAT+TGG - chr8_4:49498571-49498590 Msa1330370:CDS 30.0%
ATTAAGATCTTACAAGATGC+TGG - chr8_4:49498673-49498692 Msa1330370:CDS 30.0%
! TTATCCTTTTGTAGCATCAA+GGG - chr8_4:49498821-49498840 Msa1330370:intron 30.0%
!! TGTTGTTTCAAATGTAATGC+TGG + chr8_4:49499050-49499069 None:intergenic 30.0%
GAAACAACACATTAGTTGTT+AGG - chr8_4:49499061-49499080 Msa1330370:CDS 30.0%
CACATTAGTTGTTAGGTTAT+AGG - chr8_4:49499068-49499087 Msa1330370:CDS 30.0%
GATTGATGCATGTAATTAGT+TGG - chr8_4:49499150-49499169 Msa1330370:CDS 30.0%
CTAACAATTCGAAAATTAGC+AGG + chr8_4:49499190-49499209 None:intergenic 30.0%
!! ATTTTAAAGGAGTTAAGCCT+AGG - chr8_4:49499343-49499362 Msa1330370:CDS 30.0%
!!! TAAATTAGTTTTCTTGGGGA+TGG + chr8_4:49499543-49499562 None:intergenic 30.0%
GTACTGAGATTCATTCAAAG+TGG - chr8_4:49494557-49494576 Msa1330370:three_prime_UTR 35.0%
!! TGATGGATTGGAATTGGATT+AGG + chr8_4:49494605-49494624 None:intergenic 35.0%
! CAATTTGGATTTGAAGTGTG+AGG + chr8_4:49494641-49494660 None:intergenic 35.0%
TATTGTTGTAGTGATCTCGT+TGG - chr8_4:49494829-49494848 Msa1330370:three_prime_UTR 35.0%
! GTGATAGAAAGTATGATTCG+GGG - chr8_4:49495058-49495077 Msa1330370:three_prime_UTR 35.0%
AGTAGGGATATTACAGTTGA+AGG - chr8_4:49495342-49495361 Msa1330370:CDS 35.0%
GTAGGGATATTACAGTTGAA+GGG - chr8_4:49495343-49495362 Msa1330370:CDS 35.0%
!!! GTTTTTTCAGTACAAGGAGA+AGG - chr8_4:49495777-49495796 Msa1330370:intron 35.0%
AAGCTATGAAATTTGGGTCA+CGG - chr8_4:49495856-49495875 Msa1330370:intron 35.0%
CAAAACAAGTACCCATTCTA+AGG + chr8_4:49495941-49495960 None:intergenic 35.0%
TGAACATGACGATTTACGTT+TGG - chr8_4:49496014-49496033 Msa1330370:intron 35.0%
AACATATCTATTAGACGACC+AGG + chr8_4:49496073-49496092 None:intergenic 35.0%
TGGTCGTCTAATAGATATGT+TGG - chr8_4:49496072-49496091 Msa1330370:intron 35.0%
TTTACAATCTTCCGAATCTG+AGG + chr8_4:49496178-49496197 None:intergenic 35.0%
CTCAATTGCTTACTAATTGC+AGG + chr8_4:49496226-49496245 None:intergenic 35.0%
GTCATGTTTCTTCTGGATTA+TGG - chr8_4:49496271-49496290 Msa1330370:intron 35.0%
GTAATGCCAGGAAAATACTT+CGG + chr8_4:49496425-49496444 None:intergenic 35.0%
CCACTTCTGAATTGAAAGAA+AGG + chr8_4:49496454-49496473 None:intergenic 35.0%
CCTTTCTTTCAATTCAGAAG+TGG - chr8_4:49496451-49496470 Msa1330370:intron 35.0%
GAAAGAAATTCCTTAGAGGA+AGG + chr8_4:49496492-49496511 None:intergenic 35.0%
TGTTTCCTAGACTTTGACAT+AGG - chr8_4:49496694-49496713 Msa1330370:CDS 35.0%
GTTTCCTAGACTTTGACATA+GGG - chr8_4:49496695-49496714 Msa1330370:CDS 35.0%
TTTCCTAGACTTTGACATAG+GGG - chr8_4:49496696-49496715 Msa1330370:CDS 35.0%
ATCTCTGCTAATGACTACAT+AGG - chr8_4:49496757-49496776 Msa1330370:intron 35.0%
GTGTATATGTTATAACTGGG+AGG - chr8_4:49496811-49496830 Msa1330370:CDS 35.0%
!!! AAGTTGTCGATTTTCACTTG+GGG + chr8_4:49496908-49496927 None:intergenic 35.0%
GAAAATCGACAACTTAAGCT+AGG - chr8_4:49496913-49496932 Msa1330370:intron 35.0%
CATATTGAATCCGTTTGCTT+TGG - chr8_4:49497046-49497065 Msa1330370:CDS 35.0%
AATTGTACCTCCAAAGCAAA+CGG + chr8_4:49497059-49497078 None:intergenic 35.0%
TAAGTTGTTGCGCTATGAAT+TGG - chr8_4:49497267-49497286 Msa1330370:intron 35.0%
GTGGGATATCATGATCTTAT+AGG - chr8_4:49497336-49497355 Msa1330370:intron 35.0%
CCTGTTATATTTCTCCATGT+CGG + chr8_4:49497425-49497444 None:intergenic 35.0%
ATTTATCATCTGTGACTGTG+AGG + chr8_4:49497455-49497474 None:intergenic 35.0%
ACTAGACAATTGAGAATGGA+TGG - chr8_4:49497615-49497634 Msa1330370:intron 35.0%
TGATAAAAACCAGGCTGAAA+GGG - chr8_4:49497662-49497681 Msa1330370:intron 35.0%
!!! GTTTTGGCTGAATTTAAGAG+TGG - chr8_4:49497690-49497709 Msa1330370:intron 35.0%
! CACTGTGTGTTTAGAATCTT+AGG - chr8_4:49497767-49497786 Msa1330370:intron 35.0%
AACCACAAATTGTTGTCAAG+GGG + chr8_4:49497851-49497870 None:intergenic 35.0%
CAAACCACAAATTGTTGTCA+AGG + chr8_4:49497853-49497872 None:intergenic 35.0%
ACTGCTTGATGGAGTTAATT+TGG - chr8_4:49497970-49497989 Msa1330370:intron 35.0%
CTGCTTGATGGAGTTAATTT+GGG - chr8_4:49497971-49497990 Msa1330370:intron 35.0%
GTGAAATACAGGATCATACA+TGG + chr8_4:49498100-49498119 None:intergenic 35.0%
TGTATGATCCTGTATTTCAC+GGG - chr8_4:49498100-49498119 Msa1330370:CDS 35.0%
AAAGTATGTATGAGTCAACC+GGG + chr8_4:49498300-49498319 None:intergenic 35.0%
CAAAGTATGTATGAGTCAAC+CGG + chr8_4:49498301-49498320 None:intergenic 35.0%
GTTTGATCCCTAGAATCTTA+CGG - chr8_4:49498420-49498439 Msa1330370:CDS 35.0%
TTTGATCCCTAGAATCTTAC+GGG - chr8_4:49498421-49498440 Msa1330370:CDS 35.0%
ATCATAAGGAATTGTGTGCA+AGG + chr8_4:49498481-49498500 None:intergenic 35.0%
TGTGAAGGACATAAAATGTG+TGG - chr8_4:49498522-49498541 Msa1330370:intron 35.0%
TTCTATGGACATAATCTTCG+AGG + chr8_4:49498570-49498589 None:intergenic 35.0%
! CTTATCCTTTTGTAGCATCA+AGG - chr8_4:49498820-49498839 Msa1330370:intron 35.0%
! TATCCTTTTGTAGCATCAAG+GGG - chr8_4:49498822-49498841 Msa1330370:intron 35.0%
! TTGCTCTTTTTCTCGATTTC+AGG - chr8_4:49499392-49499411 Msa1330370:intron 35.0%
AAATGTCAGCTTGCAATTTG+TGG + chr8_4:49499499-49499518 None:intergenic 35.0%
ATTACATATACCTGAGTGTG+AGG - chr8_4:49499572-49499591 Msa1330370:five_prime_UTR 35.0%
! GTTTACGGAAAAGCGCAATT+TGG + chr8_4:49494656-49494675 None:intergenic 40.0%
! CGGAGTATCTATTGTCGTAA+GGG + chr8_4:49494700-49494719 None:intergenic 40.0%
! TCGGAGTATCTATTGTCGTA+AGG + chr8_4:49494701-49494720 None:intergenic 40.0%
TTTGGCCCTAGATTTAGCAA+CGG - chr8_4:49495027-49495046 Msa1330370:three_prime_UTR 40.0%
AGGTAGACATGGATCTTCTA+AGG - chr8_4:49495191-49495210 Msa1330370:three_prime_UTR 40.0%
! TCAGACATGGCTTGTATCAT+AGG + chr8_4:49495297-49495316 None:intergenic 40.0%
!! CATAACTTGCTGATCAGACA+TGG + chr8_4:49495310-49495329 None:intergenic 40.0%
CTGTAATATCCCTACTAGCA+CGG + chr8_4:49495338-49495357 None:intergenic 40.0%
! TGAAAAGCGCGAATTGGTTT+CGG + chr8_4:49495378-49495397 None:intergenic 40.0%
! TTTCATGAGGCGAATTTTCC+TGG - chr8_4:49495393-49495412 Msa1330370:CDS 40.0%
CTTGACGTTATTGCCAAGTT+GGG - chr8_4:49495527-49495546 Msa1330370:CDS 40.0%
TTAATTGGCATTGCTGAGAC+TGG - chr8_4:49495611-49495630 Msa1330370:CDS 40.0%
TGAACAGCTAACTCTCTAGT+TGG + chr8_4:49495825-49495844 None:intergenic 40.0%
AGATGTACATGCATATACGG+TGG - chr8_4:49495888-49495907 Msa1330370:intron 40.0%
!! TTCTAAGGTCACGGATTTGA+GGG + chr8_4:49495926-49495945 None:intergenic 40.0%
!! ATTCTAAGGTCACGGATTTG+AGG + chr8_4:49495927-49495946 None:intergenic 40.0%
TCAAATCCGTGACCTTAGAA+TGG - chr8_4:49495926-49495945 Msa1330370:intron 40.0%
CAAATCCGTGACCTTAGAAT+GGG - chr8_4:49495927-49495946 Msa1330370:intron 40.0%
!! AAGTACCCATTCTAAGGTCA+CGG + chr8_4:49495935-49495954 None:intergenic 40.0%
CAGGACCTTCAGTTATGTAA+AGG + chr8_4:49495964-49495983 None:intergenic 40.0%
GAGATTGTTATAGCTACACC+TGG - chr8_4:49496052-49496071 Msa1330370:intron 40.0%
!!! TGGGTTTTGAACCTCAGATT+CGG - chr8_4:49496164-49496183 Msa1330370:intron 40.0%
GATTCGGAAGATTGTAAACC+AGG - chr8_4:49496180-49496199 Msa1330370:intron 40.0%
AGTTCATTGATAGAGTCTGC+AGG - chr8_4:49496388-49496407 Msa1330370:intron 40.0%
CTGGGAGGTTAATATCAAGT+TGG - chr8_4:49496826-49496845 Msa1330370:CDS 40.0%
AACTTTACTCTACTCCCCTA+AGG - chr8_4:49496869-49496888 Msa1330370:CDS 40.0%
ACTTTACTCTACTCCCCTAA+GGG - chr8_4:49496870-49496889 Msa1330370:CDS 40.0%
!!! AGTTGTCGATTTTCACTTGG+GGG + chr8_4:49496907-49496926 None:intergenic 40.0%
ATTGAATCCGTTTGCTTTGG+AGG - chr8_4:49497049-49497068 Msa1330370:CDS 40.0%
AATAACAGATTCGGCCAGAT+AGG - chr8_4:49497106-49497125 Msa1330370:CDS 40.0%
CAGTATAATGTCTGCCTATC+TGG + chr8_4:49497123-49497142 None:intergenic 40.0%
CAGATAGGCAGACATTATAC+TGG - chr8_4:49497121-49497140 Msa1330370:intron 40.0%
CATTATACTGGAGTGCAACA+TGG - chr8_4:49497133-49497152 Msa1330370:intron 40.0%
GTTTCTGCACAACCCATATA+AGG - chr8_4:49497185-49497204 Msa1330370:intron 40.0%
CCGACATGGAGAAATATAAC+AGG - chr8_4:49497422-49497441 Msa1330370:intron 40.0%
!! TGCTGAAAGAAGTGATGGAT+GGG - chr8_4:49497544-49497563 Msa1330370:intron 40.0%
GACAATTGAGAATGGATGGA+TGG - chr8_4:49497619-49497638 Msa1330370:intron 40.0%
!! CTGGTTTTTATCACCATGGA+TGG + chr8_4:49497655-49497674 None:intergenic 40.0%
CATCCATGGTGATAAAAACC+AGG - chr8_4:49497653-49497672 Msa1330370:intron 40.0%
GTGATAAAAACCAGGCTGAA+AGG - chr8_4:49497661-49497680 Msa1330370:intron 40.0%
ACATCAGTGGCAGTCATTAT+TGG + chr8_4:49497723-49497742 None:intergenic 40.0%
GAACTTAACAATAGGCGAGT+TGG - chr8_4:49497808-49497827 Msa1330370:intron 40.0%
AAATTGTTGTCAAGGGGAAC+TGG + chr8_4:49497845-49497864 None:intergenic 40.0%
TTCCCCTTGACAACAATTTG+TGG - chr8_4:49497846-49497865 Msa1330370:intron 40.0%
! GGGGTCATATTTGAGTTTGT+TGG - chr8_4:49497887-49497906 Msa1330370:intron 40.0%
ATTTCATCTCATCAATCCCC+TGG + chr8_4:49497930-49497949 None:intergenic 40.0%
GTCAAGTTATATGGATGCCT+AGG - chr8_4:49498012-49498031 Msa1330370:intron 40.0%
AGAGTTCCTTTGATATGGCT+GGG - chr8_4:49498044-49498063 Msa1330370:intron 40.0%
CAATATCCCAGCCATATCAA+AGG + chr8_4:49498053-49498072 None:intergenic 40.0%
GTATGATCCTGTATTTCACG+GGG - chr8_4:49498101-49498120 Msa1330370:CDS 40.0%
CATCCTAGTCATATCACTGT+TGG - chr8_4:49498206-49498225 Msa1330370:intron 40.0%
TATGGAGCTGGTTATCTTTG+CGG - chr8_4:49498274-49498293 Msa1330370:intron 40.0%
GATACAGTAGATGACAGTGA+TGG - chr8_4:49498331-49498350 Msa1330370:CDS 40.0%
AGCTTCTCCTTATCCCTTAA+AGG - chr8_4:49498357-49498376 Msa1330370:CDS 40.0%
TCCTTATCCCTTAAAGGTTC+AGG - chr8_4:49498363-49498382 Msa1330370:CDS 40.0%
! ACCTGAACCTTTAAGGGATA+AGG + chr8_4:49498367-49498386 None:intergenic 40.0%
TTATCCCTTAAAGGTTCAGG+TGG - chr8_4:49498366-49498385 Msa1330370:CDS 40.0%
TATCCCTTAAAGGTTCAGGT+GGG - chr8_4:49498367-49498386 Msa1330370:CDS 40.0%
TTGATCCCTAGAATCTTACG+GGG - chr8_4:49498422-49498441 Msa1330370:CDS 40.0%
! CTTGTTTCTTGCAGATGTGA+AGG - chr8_4:49498507-49498526 Msa1330370:intron 40.0%
ACATAATCTTCGAGGCTTGA+AGG + chr8_4:49498562-49498581 None:intergenic 40.0%
TGCTAATGCGAAGTATGCTA+GGG - chr8_4:49498645-49498664 Msa1330370:CDS 40.0%
ATTAGTTGGAGTGACCTACA+AGG - chr8_4:49499164-49499183 Msa1330370:CDS 40.0%
CTGATATTTAACTGACAGCC+AGG - chr8_4:49499235-49499254 Msa1330370:CDS 40.0%
! TTCTCGATTTCAGGAGTACA+AGG - chr8_4:49499401-49499420 Msa1330370:intron 40.0%
! TCTCGATTTCAGGAGTACAA+GGG - chr8_4:49499402-49499421 Msa1330370:intron 40.0%
TCAGCTTGCAATTTGTGGAT+TGG + chr8_4:49499494-49499513 None:intergenic 40.0%
AATTGCATTACCTCACACTC+AGG + chr8_4:49499585-49499604 None:intergenic 40.0%
! TCCGATTCCACTTCTTTTCG+CGG - chr8_4:49494716-49494735 Msa1330370:three_prime_UTR 45.0%
!! GAAAACGAAAGTACCTGCGA+CGG + chr8_4:49494742-49494761 None:intergenic 45.0%
TGGTAGAAAGTGAGGAATCG+GGG + chr8_4:49494956-49494975 None:intergenic 45.0%
GTGGTAGAAAGTGAGGAATC+GGG + chr8_4:49494957-49494976 None:intergenic 45.0%
GGTGGTAGAAAGTGAGGAAT+CGG + chr8_4:49494958-49494977 None:intergenic 45.0%
CGTGACCGTTGCTAAATCTA+GGG + chr8_4:49495035-49495054 None:intergenic 45.0%
TTATGCAGTACCGTGCTAGT+AGG - chr8_4:49495325-49495344 Msa1330370:CDS 45.0%
TATGCAGTACCGTGCTAGTA+GGG - chr8_4:49495326-49495345 Msa1330370:CDS 45.0%
! ACCAATTCGCGCTTTTCATG+AGG - chr8_4:49495380-49495399 Msa1330370:CDS 45.0%
CCAACTTGGCAATAACGTCA+AGG + chr8_4:49495529-49495548 None:intergenic 45.0%
CCTTGACGTTATTGCCAAGT+TGG - chr8_4:49495526-49495545 Msa1330370:CDS 45.0%
AGGCTCAACAAAACCCAACT+TGG + chr8_4:49495543-49495562 None:intergenic 45.0%
TGTTGAGCCTACTCCAATTC+AGG - chr8_4:49495553-49495572 Msa1330370:CDS 45.0%
! GCACTGACATGAACTATAGC+AGG + chr8_4:49495665-49495684 None:intergenic 45.0%
!! CTCTAGTTGGTGCTAAAACC+AGG + chr8_4:49495812-49495831 None:intergenic 45.0%
ATATACGGTGGTGCTCCAAA+GGG - chr8_4:49495900-49495919 Msa1330370:intron 45.0%
!! GACGATTTACGTTTGGTGCT+TGG - chr8_4:49496021-49496040 Msa1330370:intron 45.0%
!! ATTTACGTTTGGTGCTTGGC+AGG - chr8_4:49496025-49496044 Msa1330370:intron 45.0%
GATCAGCTTCATCCAAGACA+AGG + chr8_4:49496132-49496151 None:intergenic 45.0%
GGATGAAGCTGATCGAATGT+TGG - chr8_4:49496138-49496157 Msa1330370:intron 45.0%
AGCTGATCGAATGTTGGACA+TGG - chr8_4:49496144-49496163 Msa1330370:intron 45.0%
GCTGATCGAATGTTGGACAT+GGG - chr8_4:49496145-49496164 Msa1330370:intron 45.0%
CGGAAGATTGTAAACCAGGT+AGG - chr8_4:49496184-49496203 Msa1330370:intron 45.0%
CCAGGAAAATACTTCGGAAC+AGG + chr8_4:49496419-49496438 None:intergenic 45.0%
!! CCTGTTCCGAAGTATTTTCC+TGG - chr8_4:49496416-49496435 Msa1330370:intron 45.0%
GAAAGGGCAAATGTAATGCC+AGG + chr8_4:49496437-49496456 None:intergenic 45.0%
GCCATACCGCTTTAGCATTT+GGG - chr8_4:49496718-49496737 Msa1330370:intron 45.0%
CCATACCGCTTTAGCATTTG+GGG - chr8_4:49496719-49496738 Msa1330370:intron 45.0%
TGGCTCCCTAAGATTGCAAA+TGG - chr8_4:49496846-49496865 Msa1330370:CDS 45.0%
GGGGTAAGTTATACCCTTAG+GGG + chr8_4:49496886-49496905 None:intergenic 45.0%
GGGGGTAAGTTATACCCTTA+GGG + chr8_4:49496887-49496906 None:intergenic 45.0%
!!! TTGTCGATTTTCACTTGGGG+GGG + chr8_4:49496905-49496924 None:intergenic 45.0%
!!! GTTGTCGATTTTCACTTGGG+GGG + chr8_4:49496906-49496925 None:intergenic 45.0%
TGTTGAAGTTGTCACCGACA+TGG - chr8_4:49497408-49497427 Msa1330370:intron 45.0%
CAAGCTGCTGAAAGAAGTGA+TGG - chr8_4:49497539-49497558 Msa1330370:intron 45.0%
! CTGCTGAAAGAAGTGATGGA+TGG - chr8_4:49497543-49497562 Msa1330370:intron 45.0%
TCACCATGGATGGATAATGC+TGG + chr8_4:49497645-49497664 None:intergenic 45.0%
!! CAGCCTGGTTTTTATCACCA+TGG + chr8_4:49497659-49497678 None:intergenic 45.0%
AAAACCAGGCTGAAAGGGAT+TGG - chr8_4:49497667-49497686 Msa1330370:intron 45.0%
AAACCAGGCTGAAAGGGATT+GGG - chr8_4:49497668-49497687 Msa1330370:intron 45.0%
! TTAACAATAGGCGAGTTGGC+CGG - chr8_4:49497812-49497831 Msa1330370:intron 45.0%
ATTTGTGGTTTGAGTGTGCG+TGG - chr8_4:49497861-49497880 Msa1330370:intron 45.0%
TTTGTGGTTTGAGTGTGCGT+GGG - chr8_4:49497862-49497881 Msa1330370:intron 45.0%
AAGTGCCTGTAACTTGACCA+GGG - chr8_4:49497910-49497929 Msa1330370:intron 45.0%
TATATGGATGCCTAGGCTCT+AGG - chr8_4:49498019-49498038 Msa1330370:intron 45.0%
ATATGGATGCCTAGGCTCTA+GGG - chr8_4:49498020-49498039 Msa1330370:intron 45.0%
AGGGCAGAGTTCCTTTGATA+TGG - chr8_4:49498039-49498058 Msa1330370:intron 45.0%
CAGAGTTCCTTTGATATGGC+TGG - chr8_4:49498043-49498062 Msa1330370:intron 45.0%
GACATGACTTCAGGCAACAA+TGG + chr8_4:49498187-49498206 None:intergenic 45.0%
GACTAGGATGACATGACTTC+AGG + chr8_4:49498196-49498215 None:intergenic 45.0%
CTGCCAACAGTGATATGACT+AGG + chr8_4:49498212-49498231 None:intergenic 45.0%
GATAACCAGCTCCATAACTG+TGG + chr8_4:49498270-49498289 None:intergenic 45.0%
GGAATTGTGTGCAAGGTTTG+AGG + chr8_4:49498474-49498493 None:intergenic 45.0%
GTCCATAGAATTGGTCGAAC+TGG - chr8_4:49498580-49498599 Msa1330370:CDS 45.0%
AGCATACTTCGCATTAGCAC+TGG + chr8_4:49498644-49498663 None:intergenic 45.0%
GTGCTAATGCGAAGTATGCT+AGG - chr8_4:49498644-49498663 Msa1330370:CDS 45.0%
!! CTGCATTGTCTGCATTGACT+CGG - chr8_4:49498710-49498729 Msa1330370:CDS 45.0%
!!! TCTGGTGGTTTTGGTCAACA+TGG - chr8_4:49498733-49498752 Msa1330370:intron 45.0%
TCTAGTGACTGAAGTCAACG+AGG - chr8_4:49499113-49499132 Msa1330370:CDS 45.0%
! CGAAAATTAGCAGGCCTTGT+AGG + chr8_4:49499181-49499200 None:intergenic 45.0%
GCGACATCAAAAGTTGCAGT+TGG - chr8_4:49499269-49499288 Msa1330370:CDS 45.0%
CGAAATCGAGAGTTCATCCT+AGG + chr8_4:49499363-49499382 None:intergenic 45.0%
GCCGCGAAAAGAAGTGGAAT+CGG + chr8_4:49494720-49494739 None:intergenic 50.0%
AAGTGAGGAATCGGGGTAAC+CGG + chr8_4:49494949-49494968 None:intergenic 50.0%
ATGCTAAATCCACCTCCTCC+AGG + chr8_4:49494982-49495001 None:intergenic 50.0%
! GGAGGAGGTGGATTTAGCAT+AGG - chr8_4:49494982-49495001 Msa1330370:three_prime_UTR 50.0%
! GGTGGATTTAGCATAGGTCG+CGG - chr8_4:49494988-49495007 Msa1330370:three_prime_UTR 50.0%
GCGTGACCGTTGCTAAATCT+AGG + chr8_4:49495036-49495055 None:intergenic 50.0%
! AGAAAGTATGATTCGGGGCG+TGG - chr8_4:49495063-49495082 Msa1330370:three_prime_UTR 50.0%
!! GGAACTCACGGTTTTAGTGG+TGG - chr8_4:49495111-49495130 Msa1330370:three_prime_UTR 50.0%
! GGTGGATTTGGAGGTAGACA+TGG - chr8_4:49495180-49495199 Msa1330370:three_prime_UTR 50.0%
! GCCTCATGAAAAGCGCGAAT+TGG + chr8_4:49495384-49495403 None:intergenic 50.0%
TCTCTACCAGTAAGGGCCAT+GGG + chr8_4:49495590-49495609 None:intergenic 50.0%
ATCTCTACCAGTAAGGGCCA+TGG + chr8_4:49495591-49495610 None:intergenic 50.0%
GTCAGTGCACAACCTCGATT+AGG - chr8_4:49495677-49495696 Msa1330370:CDS 50.0%
GGTGCTAAAACCAGGACAAC+AGG + chr8_4:49495804-49495823 None:intergenic 50.0%
CATATACGGTGGTGCTCCAA+AGG - chr8_4:49495899-49495918 Msa1330370:intron 50.0%
GAGAGTGACGTACCTTGTCT+TGG - chr8_4:49496117-49496136 Msa1330370:intron 50.0%
AGTCACAAACAGTGCCTACC+TGG + chr8_4:49496201-49496220 None:intergenic 50.0%
CTCTGCTCTACCTTCCTCTA+AGG - chr8_4:49496479-49496498 Msa1330370:intron 50.0%
TGGCCCCTATGTCAAAGTCT+AGG + chr8_4:49496702-49496721 None:intergenic 50.0%
GGCCATACCGCTTTAGCATT+TGG - chr8_4:49496717-49496736 Msa1330370:intron 50.0%
CCCCAAATGCTAAAGCGGTA+TGG + chr8_4:49496722-49496741 None:intergenic 50.0%
GGGGGGTAAGTTATACCCTT+AGG + chr8_4:49496888-49496907 None:intergenic 50.0%
GCCAAAGGAGGTTGAATCTC+TGG - chr8_4:49497155-49497174 Msa1330370:intron 50.0%
GCCAGAGATTCAACCTCCTT+TGG + chr8_4:49497159-49497178 None:intergenic 50.0%
AGGAGGTTGAATCTCTGGCA+AGG - chr8_4:49497160-49497179 Msa1330370:intron 50.0%
TGGCCAGCATTATCCATCCA+TGG - chr8_4:49497639-49497658 Msa1330370:intron 50.0%
AAACCCAATCCCTTTCAGCC+TGG + chr8_4:49497674-49497693 None:intergenic 50.0%
! GGCTGAAAGGGATTGGGTTT+TGG - chr8_4:49497674-49497693 Msa1330370:intron 50.0%
! GAAGTGCCTGTAACTTGACC+AGG - chr8_4:49497909-49497928 Msa1330370:intron 50.0%
AGTGCCTGTAACTTGACCAG+GGG - chr8_4:49497911-49497930 Msa1330370:intron 50.0%
CAATCCCCTGGTCAAGTTAC+AGG + chr8_4:49497918-49497937 None:intergenic 50.0%
GCTGTCAGTAGACTGCTTGA+TGG - chr8_4:49497959-49497978 Msa1330370:intron 50.0%
TAACCTGCCCCGTGAAATAC+AGG + chr8_4:49498111-49498130 None:intergenic 50.0%
TCGATCCCCATCCACAGTTA+TGG - chr8_4:49498256-49498275 Msa1330370:intron 50.0%
CAGCTCCATAACTGTGGATG+GGG + chr8_4:49498264-49498283 None:intergenic 50.0%
CCAGCTCCATAACTGTGGAT+GGG + chr8_4:49498265-49498284 None:intergenic 50.0%
ACCAGCTCCATAACTGTGGA+TGG + chr8_4:49498266-49498285 None:intergenic 50.0%
GTGCCCACCTGAACCTTTAA+GGG + chr8_4:49498373-49498392 None:intergenic 50.0%
TGTGCCCACCTGAACCTTTA+AGG + chr8_4:49498374-49498393 None:intergenic 50.0%
AATCTTACGGGGCAGGGATA+AGG - chr8_4:49498433-49498452 Msa1330370:CDS 50.0%
GGCCAGTTCGACCAATTCTA+TGG + chr8_4:49498585-49498604 None:intergenic 50.0%
! CAGTTCCTTTAGCTCCTGCA+CGG + chr8_4:49498606-49498625 None:intergenic 50.0%
CGAGTCAATGCAGACAATGC+AGG + chr8_4:49498712-49498731 None:intergenic 50.0%
!! TTGTCTGCATTGACTCGGTC+TGG - chr8_4:49498715-49498734 Msa1330370:intron 50.0%
!!! TTGACTCGGTCTGGTGGTTT+TGG - chr8_4:49498724-49498743 Msa1330370:intron 50.0%
CCTCCCCTTGATGCTACAAA+AGG + chr8_4:49498828-49498847 None:intergenic 50.0%
! CCTTTTGTAGCATCAAGGGG+AGG - chr8_4:49498825-49498844 Msa1330370:intron 50.0%
GGATCCAATGCCATTCCTGT+AGG - chr8_4:49498906-49498925 Msa1330370:CDS 50.0%
TCCAATGCCATTCCTGTAGG+CGG - chr8_4:49498909-49498928 Msa1330370:CDS 50.0%
ACCAACTACCTAGACTGCCA+CGG + chr8_4:49498942-49498961 None:intergenic 50.0%
ATGTCGCAGAGAATGACTCC+TGG + chr8_4:49499256-49499275 None:intergenic 50.0%
CCTATGCCGCCACCGAATTT+CGG - chr8_4:49494853-49494872 Msa1330370:three_prime_UTR 55.0%
GCATATGGAGCAGCACCGTA+CGG + chr8_4:49494895-49494914 None:intergenic 55.0%
GTCGGTGCATGGGATGCATA+TGG + chr8_4:49494910-49494929 None:intergenic 55.0%
! TATGCATCCCATGCACCGAC+TGG - chr8_4:49494910-49494929 Msa1330370:three_prime_UTR 55.0%
!! TCCCATGCACCGACTGGTTT+CGG - chr8_4:49494916-49494935 Msa1330370:three_prime_UTR 55.0%
TCCGAAACCAGTCGGTGCAT+GGG + chr8_4:49494920-49494939 None:intergenic 55.0%
ATCCGAAACCAGTCGGTGCA+TGG + chr8_4:49494921-49494940 None:intergenic 55.0%
GGAGCTGATCCGAAACCAGT+CGG + chr8_4:49494928-49494947 None:intergenic 55.0%
!! GACTGGTTTCGGATCAGCTC+CGG - chr8_4:49494927-49494946 Msa1330370:three_prime_UTR 55.0%
CCAGGAGGTGGTAGAAAGTG+AGG + chr8_4:49494964-49494983 None:intergenic 55.0%
CCTCACTTTCTACCACCTCC+TGG - chr8_4:49494961-49494980 Msa1330370:three_prime_UTR 55.0%
CACTTTCTACCACCTCCTGG+AGG - chr8_4:49494964-49494983 Msa1330370:three_prime_UTR 55.0%
TTTCTACCACCTCCTGGAGG+AGG - chr8_4:49494967-49494986 Msa1330370:three_prime_UTR 55.0%
CTAAATCCACCTCCTCCAGG+AGG + chr8_4:49494979-49494998 None:intergenic 55.0%
GGATTTAGCATAGGTCGCGG+TGG - chr8_4:49494991-49495010 Msa1330370:three_prime_UTR 55.0%
TTTAGCATAGGTCGCGGTGG+TGG - chr8_4:49494994-49495013 Msa1330370:three_prime_UTR 55.0%
! AAGTATGATTCGGGGCGTGG+TGG - chr8_4:49495066-49495085 Msa1330370:three_prime_UTR 55.0%
! AGTATGATTCGGGGCGTGGT+GGG - chr8_4:49495067-49495086 Msa1330370:three_prime_UTR 55.0%
!! GGCGGAACTCACGGTTTTAG+TGG - chr8_4:49495108-49495127 Msa1330370:three_prime_UTR 55.0%
!! CACGGTTTTAGTGGTGGCAG+AGG - chr8_4:49495117-49495136 Msa1330370:three_prime_UTR 55.0%
TTTAGTGGTGGCAGAGGTCG+TGG - chr8_4:49495123-49495142 Msa1330370:three_prime_UTR 55.0%
!! AGAGGAGGTAGTGGAGGAAG+AGG - chr8_4:49495156-49495175 Msa1330370:three_prime_UTR 55.0%
!! GGAGGAAGAGGTGGTGGATT+TGG - chr8_4:49495168-49495187 Msa1330370:three_prime_UTR 55.0%
!! GGAAGAGGTGGTGGATTTGG+AGG - chr8_4:49495171-49495190 Msa1330370:three_prime_UTR 55.0%
CCTACTCCAATTCAGGCCCA+GGG - chr8_4:49495560-49495579 Msa1330370:CDS 55.0%
! TGGCATTGCTGAGACTGGCT+CGG - chr8_4:49495616-49495635 Msa1330370:CDS 55.0%
AGGAGAAGGTCCTGTTGTCC+TGG - chr8_4:49495791-49495810 Msa1330370:intron 55.0%
TCACGGATTTGAGGGCCCTT+TGG + chr8_4:49495918-49495937 None:intergenic 55.0%
CAAGGTACGTCACTCTCTGC+AGG + chr8_4:49496114-49496133 None:intergenic 55.0%
CCAGGCCCCAAATGCTAAAG+CGG + chr8_4:49496727-49496746 None:intergenic 55.0%
CTGGAGTGCAACATGGCCAA+AGG - chr8_4:49497140-49497159 Msa1330370:intron 55.0%
GAGTGCAACATGGCCAAAGG+AGG - chr8_4:49497143-49497162 Msa1330370:intron 55.0%
CTGCCACTGATGTTGCTGCA+CGG - chr8_4:49497730-49497749 Msa1330370:intron 55.0%
TGCCACTGATGTTGCTGCAC+GGG - chr8_4:49497731-49497750 Msa1330370:intron 55.0%
AAGGGGAACTGGAAAGCAGC+CGG + chr8_4:49497834-49497853 None:intergenic 55.0%
TGGTTTGAGTGTGCGTGGGT+GGG - chr8_4:49497866-49497885 Msa1330370:intron 55.0%
GATCCTGTATTTCACGGGGC+AGG - chr8_4:49498105-49498124 Msa1330370:CDS 55.0%
TCACGGGGCAGGTTAATGTG+TGG - chr8_4:49498116-49498135 Msa1330370:CDS 55.0%
CCCATCCACAGTTATGGAGC+TGG - chr8_4:49498262-49498281 Msa1330370:intron 55.0%
AGCTGGTTATCTTTGCGGCC+CGG - chr8_4:49498279-49498298 Msa1330370:intron 55.0%
TCCCTAGAATCTTACGGGGC+AGG - chr8_4:49498426-49498445 Msa1330370:CDS 55.0%
CCCTGCCCCGTAAGATTCTA+GGG + chr8_4:49498430-49498449 None:intergenic 55.0%
CCCTAGAATCTTACGGGGCA+GGG - chr8_4:49498427-49498446 Msa1330370:CDS 55.0%
TCCCTGCCCCGTAAGATTCT+AGG + chr8_4:49498431-49498450 None:intergenic 55.0%
!! TCTGCATTGACTCGGTCTGG+TGG - chr8_4:49498718-49498737 Msa1330370:intron 55.0%
TTTCGCTCAAGAGGACGAGG+AGG - chr8_4:49498849-49498868 Msa1330370:CDS 55.0%
TTCGCTCAAGAGGACGAGGA+GGG - chr8_4:49498850-49498869 Msa1330370:CDS 55.0%
GGCAATCGGGGTTCAACATC+AGG - chr8_4:49498885-49498904 Msa1330370:CDS 55.0%
CCAATGCCATTCCTGTAGGC+GGG - chr8_4:49498910-49498929 Msa1330370:CDS 55.0%
! CCGAAATTCGGTGGCGGCAT+AGG + chr8_4:49494856-49494875 None:intergenic 60.0%
AATCCACCTCCTCCAGGAGG+TGG + chr8_4:49494976-49494995 None:intergenic 60.0%
!!! GGTGGTGGAGGTGGTGGTTT+TGG - chr8_4:49495009-49495028 Msa1330370:three_prime_UTR 60.0%
GGTGGTAGAGGCGGAACTCA+CGG - chr8_4:49495099-49495118 Msa1330370:three_prime_UTR 60.0%
!! GGAGGTAGTGGAGGAAGAGG+TGG - chr8_4:49495159-49495178 Msa1330370:three_prime_UTR 60.0%
!! GGTAGTGGAGGAAGAGGTGG+TGG - chr8_4:49495162-49495181 Msa1330370:three_prime_UTR 60.0%
GCCTACTCCAATTCAGGCCC+AGG - chr8_4:49495559-49495578 Msa1330370:CDS 60.0%
CCCTGGGCCTGAATTGGAGT+AGG + chr8_4:49495563-49495582 None:intergenic 60.0%
CTCCAATTCAGGCCCAGGGT+TGG - chr8_4:49495564-49495583 Msa1330370:CDS 60.0%
! GGCATTGCTGAGACTGGCTC+GGG - chr8_4:49495617-49495636 Msa1330370:CDS 60.0%
! CCGCTTTAGCATTTGGGGCC+TGG - chr8_4:49496724-49496743 Msa1330370:intron 60.0%
GCAGAGATAGCGTAGCGTCC+AGG + chr8_4:49496745-49496764 None:intergenic 60.0%
GCCACTGATGTTGCTGCACG+GGG - chr8_4:49497732-49497751 Msa1330370:intron 60.0%
ACCCCGTGCAGCAACATCAG+TGG + chr8_4:49497736-49497755 None:intergenic 60.0%
GATGTTGCTGCACGGGGTCT+TGG - chr8_4:49497738-49497757 Msa1330370:intron 60.0%
TTGCTGCACGGGGTCTTGGT+AGG - chr8_4:49497742-49497761 Msa1330370:intron 60.0%
GTGGTTTGAGTGTGCGTGGG+TGG - chr8_4:49497865-49497884 Msa1330370:intron 60.0%
GGTTTGAGTGTGCGTGGGTG+GGG - chr8_4:49497867-49497886 Msa1330370:intron 60.0%
GTTTGAGTGTGCGTGGGTGG+GGG - chr8_4:49497868-49497887 Msa1330370:intron 60.0%
GGAACTCTGCCCTAGAGCCT+AGG + chr8_4:49498032-49498051 None:intergenic 60.0%
ATTGGTCGAACTGGCCGTGC+AGG - chr8_4:49498589-49498608 Msa1330370:CDS 60.0%
ACTGGCCGTGCAGGAGCTAA+AGG - chr8_4:49498598-49498617 Msa1330370:CDS 60.0%
AGGGGAGGCTTTCGCTCAAG+AGG - chr8_4:49498840-49498859 Msa1330370:CDS 60.0%
GGCTTTCGCTCAAGAGGACG+AGG - chr8_4:49498846-49498865 Msa1330370:CDS 60.0%
TCGCTCAAGAGGACGAGGAG+GGG - chr8_4:49498851-49498870 Msa1330370:CDS 60.0%
GGGGAGGAGGCTATGGCAAT+CGG - chr8_4:49498871-49498890 Msa1330370:CDS 60.0%
GGGAGGAGGCTATGGCAATC+GGG - chr8_4:49498872-49498891 Msa1330370:CDS 60.0%
GGAGGAGGCTATGGCAATCG+GGG - chr8_4:49498873-49498892 Msa1330370:CDS 60.0%
CCCGCCTACAGGAATGGCAT+TGG + chr8_4:49498913-49498932 None:intergenic 60.0%
CCTCTTCCCGCCTACAGGAA+TGG + chr8_4:49498919-49498938 None:intergenic 60.0%
CCATTCCTGTAGGCGGGAAG+AGG - chr8_4:49498916-49498935 Msa1330370:CDS 60.0%
GCCGTGGCAGTCTAGGTAGT+TGG - chr8_4:49498938-49498957 Msa1330370:CDS 60.0%
GCGACGGCCGCGAAAAGAAG+TGG + chr8_4:49494726-49494745 None:intergenic 65.0%
! CTTCTTTTCGCGGCCGTCGC+AGG - chr8_4:49494726-49494745 Msa1330370:three_prime_UTR 65.0%
! CCACGGCCGAAATTCGGTGG+CGG + chr8_4:49494862-49494881 None:intergenic 65.0%
CCACCGAATTTCGGCCGTGG+CGG - chr8_4:49494862-49494881 Msa1330370:three_prime_UTR 65.0%
GGACCGCCACGGCCGAAATT+CGG + chr8_4:49494868-49494887 None:intergenic 65.0%
CTACCACCTCCTGGAGGAGG+TGG - chr8_4:49494970-49494989 Msa1330370:three_prime_UTR 65.0%
! AGCATAGGTCGCGGTGGTGG+AGG - chr8_4:49494997-49495016 Msa1330370:three_prime_UTR 65.0%
!! ATAGGTCGCGGTGGTGGAGG+TGG - chr8_4:49495000-49495019 Msa1330370:three_prime_UTR 65.0%
! AGAGGTGGCGGTGGTAGAGG+CGG - chr8_4:49495090-49495109 Msa1330370:three_prime_UTR 65.0%
AGTGGTGGCAGAGGTCGTGG+AGG - chr8_4:49495126-49495145 Msa1330370:three_prime_UTR 65.0%
! GGTGGTGGCAGAGGAGGTAG+TGG - chr8_4:49495147-49495166 Msa1330370:three_prime_UTR 65.0%
! GGTGGCAGAGGAGGTAGTGG+AGG - chr8_4:49495150-49495169 Msa1330370:three_prime_UTR 65.0%
GGCCAACCCTGGGCCTGAAT+TGG + chr8_4:49495569-49495588 None:intergenic 65.0%
AAGGGCCATGGGCCAACCCT+GGG + chr8_4:49495579-49495598 None:intergenic 65.0%
TAAGGGCCATGGGCCAACCC+TGG + chr8_4:49495580-49495599 None:intergenic 65.0%
! GGTTGGCCCATGGCCCTTAC+TGG - chr8_4:49495581-49495600 Msa1330370:CDS 65.0%
CGCTCAAGAGGACGAGGAGG+GGG - chr8_4:49498852-49498871 Msa1330370:CDS 65.0%
TCAAGAGGACGAGGAGGGGG+AGG - chr8_4:49498855-49498874 Msa1330370:CDS 65.0%
GGAAGAGGCCGTGGCAGTCT+AGG - chr8_4:49498931-49498950 Msa1330370:CDS 65.0%
CCGCCACCGAATTTCGGCCG+TGG - chr8_4:49494859-49494878 Msa1330370:three_prime_UTR 70.0%
CCGCCACGGCCGAAATTCGG+TGG + chr8_4:49494865-49494884 None:intergenic 70.0%
CGTACGGAGCAGGACCGCCA+CGG + chr8_4:49494879-49494898 None:intergenic 70.0%
CGTGGCGGTCCTGCTCCGTA+CGG - chr8_4:49494877-49494896 Msa1330370:three_prime_UTR 70.0%
GGAGCAGCACCGTACGGAGC+AGG + chr8_4:49494889-49494908 None:intergenic 70.0%
! GATTCGGGGCGTGGTGGGAG+AGG - chr8_4:49495072-49495091 Msa1330370:three_prime_UTR 70.0%
! GGGAGAGGTGGCGGTGGTAG+AGG - chr8_4:49495087-49495106 Msa1330370:three_prime_UTR 70.0%
GGTGGCAGAGGTCGTGGAGG+TGG - chr8_4:49495129-49495148 Msa1330370:three_prime_UTR 70.0%
GGCAGAGGTCGTGGAGGTGG+TGG - chr8_4:49495132-49495151 Msa1330370:three_prime_UTR 70.0%
! GGTCGTGGAGGTGGTGGCAG+AGG - chr8_4:49495138-49495157 Msa1330370:three_prime_UTR 70.0%
! CGTGGAGGTGGTGGCAGAGG+AGG - chr8_4:49495141-49495160 Msa1330370:three_prime_UTR 70.0%
!! TCAGGCCCAGGGTTGGCCCA+TGG - chr8_4:49495571-49495590 Msa1330370:CDS 70.0%
AGAGGACGAGGAGGGGGAGG+AGG - chr8_4:49498858-49498877 Msa1330370:CDS 70.0%
CGAGGAGGGGGAGGAGGCTA+TGG - chr8_4:49498864-49498883 Msa1330370:CDS 70.0%
CACGGCCTCTTCCCGCCTAC+AGG + chr8_4:49498924-49498943 None:intergenic 70.0%
CTGTAGGCGGGAAGAGGCCG+TGG - chr8_4:49498922-49498941 Msa1330370:CDS 70.0%
!! GGTCGCGGTGGTGGAGGTGG+TGG - chr8_4:49495003-49495022 Msa1330370:three_prime_UTR 75.0%
! TCGGGGCGTGGTGGGAGAGG+TGG - chr8_4:49495075-49495094 Msa1330370:three_prime_UTR 75.0%
! GGGCGTGGTGGGAGAGGTGG+CGG - chr8_4:49495078-49495097 Msa1330370:three_prime_UTR 75.0%
! CGTGGTGGGAGAGGTGGCGG+TGG - chr8_4:49495081-49495100 Msa1330370:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 49494545 49499703 49494545 ID=Msa1330370;Name=Msa1330370
chr8_4 mRNA 49494545 49499703 49494545 ID=Msa1330370-mRNA-1;Parent=Msa1330370;Name=Msa1330370-mRNA-1;_AED=0.13;_eAED=0.13;_QI=147|1|1|1|1|1|10|747|629
chr8_4 exon 49494545 49495413 49494545 ID=Msa1330370-mRNA-1:exon:14371;Parent=Msa1330370-mRNA-1
chr8_4 exon 49495494 49495727 49495494 ID=Msa1330370-mRNA-1:exon:14370;Parent=Msa1330370-mRNA-1
chr8_4 exon 49496489 49496715 49496489 ID=Msa1330370-mRNA-1:exon:14369;Parent=Msa1330370-mRNA-1
chr8_4 exon 49496805 49496890 49496805 ID=Msa1330370-mRNA-1:exon:14368;Parent=Msa1330370-mRNA-1
chr8_4 exon 49497042 49497134 49497042 ID=Msa1330370-mRNA-1:exon:14367;Parent=Msa1330370-mRNA-1
chr8_4 exon 49498047 49498201 49498047 ID=Msa1330370-mRNA-1:exon:14366;Parent=Msa1330370-mRNA-1
chr8_4 exon 49498300 49498461 49498300 ID=Msa1330370-mRNA-1:exon:14365;Parent=Msa1330370-mRNA-1
chr8_4 exon 49498550 49498729 49498550 ID=Msa1330370-mRNA-1:exon:14364;Parent=Msa1330370-mRNA-1
chr8_4 exon 49498834 49499408 49498834 ID=Msa1330370-mRNA-1:exon:14363;Parent=Msa1330370-mRNA-1
chr8_4 exon 49499501 49499703 49499501 ID=Msa1330370-mRNA-1:exon:14362;Parent=Msa1330370-mRNA-1
chr8_4 five_prime_UTR 49499557 49499703 49499557 ID=Msa1330370-mRNA-1:five_prime_utr;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49499501 49499556 49499501 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49498834 49499408 49498834 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49498550 49498729 49498550 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49498300 49498461 49498300 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49498047 49498201 49498047 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49497042 49497134 49497042 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49496805 49496890 49496805 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49496489 49496715 49496489 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49495494 49495727 49495494 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 CDS 49495292 49495413 49495292 ID=Msa1330370-mRNA-1:cds;Parent=Msa1330370-mRNA-1
chr8_4 three_prime_UTR 49494545 49495291 49494545 ID=Msa1330370-mRNA-1:three_prime_utr;Parent=Msa1330370-mRNA-1
Gene Sequence

>Msa1330370

ATGAACCCTTACGACAATAGATACTCCGATTCCACTTCTTTTCGCGGCCGTCGCAGTGATCTCGTTGGACCTATGCCGCCACCGAATTTCGGCCGTGGCGGTCCTGCTCCGTACGGTGCTGCTCCATATGCATCCCATGCACCGACTGGTTTCGGATCAGCTCCGGTTACCCCGATTCCTCACTTTCTACCACCTCCTGGAGGAGGTGGATTTAGCATAGGTCGCGGTGGTGGAGGTGGTGGTTTTGGCCCTAGATTTAGCAACGGTCACGCGAGTGATAGAAAGTATGATTCGGGGCGTGGTGGGAGAGGTGGCGGTGGTAGAGGCGGAACTCACGGTTTTAGTGGTGGCAGAGGTCGTGGAGGTGGTGGCAGAGGAGGTAGTGGAGGAAGAGGTGGTGGATTTGGAGGTAGACATGGATCTTCTAAGGATGATTTGAACAACATTACACTTCCAAAGCAAGATTTTAGAAATTTGGTTCCTTTCCAGAAGAATTTCTATGTTGAAAGTCCTATGATACAAGCCATGTCTGATCAGCAAGTTATGCAGTACCGTGCTAGTAGGGATATTACAGTTGAAGGGCATGATGTGCCGAAACCAATTCGCGCTTTTCATGAGGCGAATTTTCCTGATTACTGCCTTGACGTTATTGCCAAGTTGGGTTTTGTTGAGCCTACTCCAATTCAGGCCCAGGGTTGGCCCATGGCCCTTACTGGTAGAGATTTAATTGGCATTGCTGAGACTGGCTCGGGTAAAACTCTGTCGTATCTACTTCCTGCTATAGTTCATGTCAGTGCACAACCTCGATTAGTACAAGGAGAAGGTCCTGTTGTCCTGGTTTTAGCACCAACTAGAGAGTTAGCTGTTCAAATTCAACAAGAAGCTATGAAATTTGGGTCACGGTCAAATATTAGATGTACATGCATATACGGTGGTGCTCCAAAGGGCCCTCAAATCCGTGACCTTAGAATGGGTGTTGAGATTGTTATAGCTACACCTGGTCGTCTAATAGATATGTTGGAAGCTCAGCACACAAACCTGCAGAGAGTGACGTACCTTGTCTTGGATGAAGCTGATCGAATGTTGGACATGGGTTTTGAACCTCAGATTCGGAAGATTGTAAACCAGATTCGGCCAGATAGGCAGACATTATACTGGAGTGCAACATGGCCAAAGGAGGTTGAATCTCTGGCAAGGCAGTTTCTGCACAACCCATATAAGGTAGTTATTGGGTCACCATATCTGAAAGCAAATCAATCTATAAATCAAGTTGTTGAAGTTGTCACCGACATGGAGAAATATAACAGACTGATCAAGCTGCTGAAAGAAGTGATGGATGGGAGCCGAATTCTAATATTTACAGAAACAAAAAAGGGATGTGACCAAGTTACTAGACAATTGAGAATGGATGGATGGCCAGCATTATCCATCCATGGTGATAAAAACCAGGCTGAAAGGGATTGGGTTTTGGCTGAATTTAAGAGTGGCAGAAGTCCAATAATGACTGCCACTGATGTTGCTGCACGGGGTCTTGATGTGAAGGACATAAAATGTGTGGTCAATTATGATTTTCCTTCAAGCCTCGAAGATTATGTCCATAGAATTGGTCGAACTGGCCGTGCAGGAGCTAAAGGAACTGCATATAGTTTTTTTACCAGTGCTAATGCGAAGTATGCTAGGGATTTGATTAAGATCTTACAAGATGCTGGTCAGATTGTTAGTCCTGCATTGTCTGCATTGACTCGGTCTGGTGGTTTTGGTCAACATGCATCAAGGGGAGGCTTTCGCTCAAGAGGACGAGGAGGGGGAGGAGGCTATGGCAATCGGGGTTCAACATCAGGATCCAATGCCATTCCTGTAGGCGGGAAGAGGCCGTGGCAGTCTAGGTAG
Protein sequence

>Msa1330370

MNPYDNRYSDSTSFRGRRSDLVGPMPPPNFGRGGPAPYGAAPYASHAPTGFGSAPVTPIPHFLPPPGGGGFSIGRGGGGGGFGPRFSNGHASDRKYDSGRGGRGGGGRGGTHGFSGGRGRGGGGRGGSGGRGGGFGGRHGSSKDDLNNITLPKQDFRNLVPFQKNFYVESPMIQAMSDQQVMQYRASRDITVEGHDVPKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLRMGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANAKYARDLIKILQDAGQIVSPALSALTRSGGFGQHASRGGFRSRGRGGGGGYGNRGSTSGSNAIPVGGKRPWQSR*