AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387910 MtrunA17_Chr3g0121351 98.701 616 2 5 1 613 1 613 0.0 1222
Msa0387910 MtrunA17_Chr1g0176041 75.333 600 110 8 34 613 27 608 0.0 847
Msa0387910 MtrunA17_Chr4g0063551 70.961 458 120 5 116 563 109 563 0.0 635
Msa0387910 MtrunA17_Chr2g0330401 43.649 433 217 8 109 536 61 471 8.59e-114 349
Msa0387910 MtrunA17_Chr3g0107851 39.526 506 273 8 38 527 3 491 1.53e-107 335
Msa0387910 MtrunA17_Chr6g0449911 42.094 468 240 10 133 588 152 600 8.17e-103 327
Msa0387910 MtrunA17_Chr2g0293631 44.028 427 218 7 133 557 483 890 5.40e-101 332
Msa0387910 MtrunA17_Chr4g0076491 41.014 434 228 7 129 547 270 690 6.83e-101 322
Msa0387910 MtrunA17_Chr6g0449741 40.323 434 229 7 129 547 232 650 1.28e-99 317
Msa0387910 MtrunA17_Chr7g0270131 40.217 460 246 10 95 541 170 613 3.94e-97 314
Msa0387910 MtrunA17_Chr1g0200181 36.364 473 272 7 133 593 132 587 3.86e-94 301
Msa0387910 MtrunA17_Chr1g0157691 38.983 413 230 6 133 538 134 531 1.33e-93 300
Msa0387910 MtrunA17_Chr4g0058591 42.228 386 204 6 96 480 154 521 1.50e-88 284
Msa0387910 MtrunA17_Chr2g0277821 39.078 412 232 5 131 539 489 884 2.56e-87 294
Msa0387910 MtrunA17_Chr5g0409981 41.429 420 217 10 130 538 84 485 6.45e-87 280
Msa0387910 MtrunA17_Chr6g0461751 34.123 422 260 6 138 556 132 538 1.50e-75 250
Msa0387910 MtrunA17_Chr7g0271121 40.000 395 210 10 136 521 91 467 4.38e-74 251
Msa0387910 MtrunA17_Chr5g0442191 39.153 378 208 10 147 521 82 440 4.97e-74 248
Msa0387910 MtrunA17_Chr1g0193491 34.864 479 252 13 112 563 85 530 2.24e-72 244
Msa0387910 MtrunA17_Chr7g0263771 32.653 441 264 9 107 538 88 504 2.98e-70 238
Msa0387910 MtrunA17_Chr3g0095031 39.024 369 203 10 167 532 111 460 4.25e-69 234
Msa0387910 MtrunA17_Chr7g0236841 33.565 432 253 7 144 561 8 419 1.25e-65 221
Msa0387910 MtrunA17_Chr6g0483491 33.729 421 251 7 144 556 8 408 2.15e-65 221
Msa0387910 MtrunA17_Chr2g0297261 32.924 407 248 8 127 532 17 399 8.47e-63 213
Msa0387910 MtrunA17_Chr2g0300291 36.719 384 213 10 145 520 140 501 1.28e-62 220
Msa0387910 MtrunA17_Chr2g0310581 35.264 397 231 8 134 525 41 416 6.04e-62 213
Msa0387910 MtrunA17_Chr3g0098121 36.528 386 210 11 145 520 151 511 1.09e-61 218
Msa0387910 MtrunA17_Chr4g0070981 34.103 390 234 8 145 533 40 407 2.11e-60 206
Msa0387910 MtrunA17_Chr2g0299681 33.846 390 235 8 145 533 40 407 6.71e-59 202
Msa0387910 MtrunA17_Chr2g0329931 34.103 390 234 7 145 533 40 407 1.53e-58 202
Msa0387910 MtrunA17_Chr6g0475251 34.805 385 219 11 145 518 102 465 1.35e-57 205
Msa0387910 MtrunA17_Chr8g0342861 33.333 390 237 7 145 533 40 407 1.44e-57 199
Msa0387910 MtrunA17_Chr4g0040761 32.992 391 237 8 147 533 20 389 3.12e-55 200
Msa0387910 MtrunA17_Chr1g0204391 32.824 393 216 8 145 510 43 414 3.88e-54 194
Msa0387910 MtrunA17_Chr4g0003441 36.311 347 191 8 168 508 130 452 3.65e-52 186
Msa0387910 MtrunA17_Chr3g0114081 34.737 380 209 11 152 509 22 384 6.50e-52 188
Msa0387910 MtrunA17_Chr6g0466611 31.043 393 250 7 144 526 140 521 6.57e-52 190
Msa0387910 MtrunA17_Chr7g0247221 29.620 395 251 8 145 537 142 511 1.82e-49 179
Msa0387910 MtrunA17_Chr7g0247181 29.873 395 250 10 145 537 139 508 2.45e-49 179
Msa0387910 MtrunA17_Chr1g0149251 36.446 332 179 10 184 508 2 308 3.85e-49 174
Msa0387910 MtrunA17_Chr7g0247191 29.873 395 250 10 145 537 149 518 5.98e-49 178
Msa0387910 MtrunA17_Chr8g0386451 30.886 463 284 14 82 523 216 663 1.71e-47 178
Msa0387910 MtrunA17_Chr8g0347161 34.870 347 208 10 165 503 121 457 3.43e-47 174
Msa0387910 MtrunA17_Chr7g0236831 30.323 465 252 12 117 520 137 590 3.78e-46 174
Msa0387910 MtrunA17_Chr8g0347151 35.196 358 206 10 158 503 213 556 1.11e-45 172
Msa0387910 MtrunA17_Chr2g0307471 32.737 391 221 12 146 521 91 454 3.07e-45 169
Msa0387910 MtrunA17_Chr4g0062301 33.151 365 211 11 169 522 120 462 3.73e-45 169
Msa0387910 MtrunA17_Chr8g0347171 33.151 365 226 9 147 503 161 515 5.57e-44 166
Msa0387910 MtrunA17_Chr4g0029191 28.281 442 244 12 146 523 44 476 1.30e-42 162
Msa0387910 MtrunA17_Chr4g0034411 33.154 371 223 10 157 521 87 438 1.88e-42 163
Msa0387910 MtrunA17_Chr2g0301281 28.507 442 243 11 146 523 41 473 2.56e-42 161
Msa0387910 MtrunA17_Chr5g0443991 32.884 371 225 9 157 521 87 439 3.88e-41 159
Msa0387910 MtrunA17_Chr1g0179761 28.837 430 251 15 111 510 43 447 1.79e-36 142
Msa0387910 MtrunA17_Chr2g0309551 26.906 446 269 7 139 539 102 535 1.04e-35 141
Msa0387910 MtrunA17_Chr1g0192021 26.764 411 237 11 146 510 26 418 2.53e-34 138
Msa0387910 MtrunA17_Chr4g0074521 31.671 401 215 15 131 498 67 441 3.61e-32 130
Msa0387910 MtrunA17_Chr5g0429221 27.913 369 243 8 144 510 1 348 7.49e-32 128
Msa0387910 MtrunA17_Chr3g0145781 27.047 403 258 14 144 522 130 520 1.72e-31 129
Msa0387910 MtrunA17_Chr1g0169331 25.436 401 243 10 167 532 12 391 1.14e-28 118
Msa0387910 MtrunA17_Chr4g0004301 27.114 402 209 13 183 520 70 451 2.59e-27 115
Msa0387910 MtrunA17_Chr5g0434301 26.866 402 210 13 183 520 70 451 1.28e-26 114
Msa0387910 MtrunA17_Chr3g0137901 43.411 129 66 1 380 508 23 144 2.28e-26 106
Msa0387910 MtrunA17_Chr8g0342851 25.967 362 215 9 175 533 2 313 5.30e-25 106
Msa0387910 MtrunA17_Chr4g0039471 32.906 234 130 7 132 354 202 419 4.41e-24 105
Msa0387910 MtrunA17_Chr4g0039471 30.622 209 90 8 146 353 2 156 1.07e-16 82.8
Msa0387910 MtrunA17_Chr8g0349951 35.000 160 93 3 144 302 8 157 7.26e-24 98.2
Msa0387910 MtrunA17_Chr1g0155201 29.487 312 170 14 277 569 14 294 1.62e-23 102
Msa0387910 MtrunA17_Chr4g0062321 32.018 228 132 8 257 476 23 235 1.27e-21 94.7
Msa0387910 MtrunA17_Chr8g0354761 26.050 357 220 11 169 509 31 359 3.73e-21 96.7
Msa0387910 MtrunA17_Chr4g0025141 32.461 191 104 6 335 510 15 195 2.07e-18 85.1
Msa0387910 MtrunA17_Chr3g0137891 35.393 178 99 6 184 359 2 165 4.81e-18 83.6
Msa0387910 MtrunA17_Chr0c30g0494091 32.174 230 133 6 131 350 67 283 9.21e-18 85.9
Msa0387910 MtrunA17_Chr4g0058601 47.368 76 40 0 470 545 9 84 1.93e-16 75.9
Msa0387910 MtrunA17_Chr8g0364251 33.113 151 92 3 408 556 438 581 2.96e-15 79.0
Msa0387910 MtrunA17_Chr3g0108851 22.824 425 259 14 170 573 19 395 6.13e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387910 AT2G42520.2 74.619 591 110 11 1 565 1 577 0.0 829
Msa0387910 AT2G42520.1 74.619 591 110 11 1 565 1 577 0.0 829
Msa0387910 AT2G42520.3 74.619 591 110 11 1 565 1 577 0.0 829
Msa0387910 AT3G58570.1 72.973 592 109 9 3 570 4 568 0.0 804
Msa0387910 AT3G58510.1 73.604 591 105 12 1 565 1 566 0.0 796
Msa0387910 AT3G58510.3 73.604 591 105 12 1 565 1 566 0.0 796
Msa0387910 AT3G58510.2 73.604 591 105 12 1 565 1 566 0.0 796
Msa0387910 AT5G63120.2 45.833 432 207 8 110 536 132 541 7.14e-117 360
Msa0387910 AT5G14610.2 44.681 423 214 6 133 553 149 553 1.56e-110 345
Msa0387910 AT5G14610.6 44.681 423 214 6 133 553 149 553 1.94e-110 345
Msa0387910 AT1G55150.1 41.514 436 228 8 101 531 57 470 2.36e-110 340
Msa0387910 AT5G14610.5 44.681 423 214 6 133 553 157 561 2.61e-110 345
Msa0387910 AT1G55150.2 40.215 465 246 9 101 555 82 524 1.65e-109 339
Msa0387910 AT3G01540.4 44.787 422 211 7 133 552 146 547 3.40e-108 339
Msa0387910 AT3G01540.2 44.787 422 211 7 133 552 146 547 3.40e-108 339
Msa0387910 AT3G01540.3 44.787 422 211 7 133 552 146 547 3.40e-108 339
Msa0387910 AT3G01540.1 44.787 422 211 7 133 552 146 547 3.76e-108 338
Msa0387910 AT5G14610.7 45.780 391 192 6 165 553 50 422 1.42e-103 323
Msa0387910 AT5G14610.3 45.780 391 192 6 165 553 50 422 1.42e-103 323
Msa0387910 AT5G14610.1 44.203 414 211 6 142 553 226 621 5.51e-103 328
Msa0387910 AT2G33730.1 40.553 434 230 6 129 547 297 717 4.21e-100 321
Msa0387910 AT2G47330.1 40.173 463 240 10 96 541 168 610 7.71e-96 310
Msa0387910 AT3G06480.1 41.995 431 226 7 133 557 423 835 7.89e-96 317
Msa0387910 AT5G51280.1 36.730 471 273 8 133 593 134 589 1.05e-94 303
Msa0387910 AT1G20920.2 39.614 414 231 6 129 539 175 572 1.32e-93 306
Msa0387910 AT1G20920.4 39.614 414 231 6 129 539 513 910 1.05e-91 307
Msa0387910 AT1G20920.6 39.614 414 231 6 129 539 513 910 1.05e-91 307
Msa0387910 AT1G20920.3 39.614 414 231 6 129 539 513 910 1.05e-91 307
Msa0387910 AT1G20920.7 39.614 414 231 6 129 539 513 910 1.05e-91 307
Msa0387910 AT1G20920.5 39.614 414 231 6 129 539 513 910 1.05e-91 307
Msa0387910 AT1G20920.1 39.614 414 231 6 129 539 513 910 1.05e-91 307
Msa0387910 AT4G33370.1 38.015 413 234 6 133 538 85 482 1.43e-91 293
Msa0387910 AT1G31970.1 42.680 403 205 9 144 538 115 499 1.37e-89 288
Msa0387910 AT5G63120.1 44.384 365 176 8 110 469 132 474 3.65e-88 282
Msa0387910 AT5G63120.3 44.384 365 176 8 110 469 132 474 5.51e-88 282
Msa0387910 AT5G63120.4 44.384 365 176 8 110 469 132 474 5.51e-88 282
Msa0387910 AT5G63120.5 44.384 365 176 8 110 469 132 474 5.51e-88 282
Msa0387910 AT5G14610.4 43.642 346 175 6 133 476 157 484 4.06e-84 272
Msa0387910 AT1G28180.1 41.444 374 201 6 175 547 3 359 4.26e-81 260
Msa0387910 AT3G09620.2 38.929 411 202 9 126 532 377 742 9.80e-79 269
Msa0387910 AT3G09620.1 38.929 411 202 9 126 532 376 741 1.03e-78 269
Msa0387910 AT3G02065.3 34.824 425 261 6 130 553 95 504 3.45e-78 257
Msa0387910 AT3G02065.2 34.824 425 261 6 130 553 95 504 3.45e-78 257
Msa0387910 AT3G06480.2 41.954 348 182 6 133 478 423 752 6.45e-75 255
Msa0387910 AT3G22330.1 39.459 370 202 10 167 533 126 476 1.54e-73 248
Msa0387910 AT5G60990.1 34.298 449 274 6 144 583 8 444 4.71e-72 239
Msa0387910 AT3G22310.2 38.642 383 213 10 167 546 138 501 6.54e-72 243
Msa0387910 AT3G22310.1 38.642 383 213 10 167 546 138 501 9.03e-72 243
Msa0387910 AT3G09720.2 31.973 441 264 10 109 535 92 510 4.87e-68 231
Msa0387910 AT3G09720.1 31.973 441 264 10 109 535 92 510 4.87e-68 231
Msa0387910 AT5G26742.1 38.684 380 211 8 147 521 104 466 5.31e-68 235
Msa0387910 AT5G26742.2 38.684 380 211 8 147 521 104 466 5.39e-68 235
Msa0387910 AT3G02065.1 33.858 381 236 6 174 553 2 367 8.42e-68 225
Msa0387910 AT5G26742.3 41.092 348 183 9 179 521 43 373 2.29e-65 226
Msa0387910 AT1G16280.1 37.127 369 207 7 160 522 70 419 4.24e-65 222
Msa0387910 AT3G19760.1 32.500 400 245 8 134 532 26 401 8.93e-64 216
Msa0387910 AT4G16630.1 36.126 382 217 8 145 520 167 527 2.12e-61 218
Msa0387910 AT1G72730.1 32.918 401 246 6 134 533 30 408 4.02e-59 204
Msa0387910 AT1G51380.1 30.318 409 258 8 129 535 8 391 1.10e-58 202
Msa0387910 AT3G13920.1 33.333 390 237 6 145 533 39 406 1.15e-58 202
Msa0387910 AT1G54270.1 33.846 390 235 8 145 533 39 406 1.77e-58 202
Msa0387910 AT3G13920.3 33.333 390 237 6 145 533 29 396 3.08e-58 201
Msa0387910 AT3G13920.4 33.773 379 227 7 156 533 46 401 3.15e-58 201
Msa0387910 AT1G54270.2 34.301 379 225 9 156 533 46 401 4.30e-58 201
Msa0387910 AT1G77030.1 34.711 363 218 5 147 508 30 374 7.18e-58 209
Msa0387910 AT3G13920.2 34.048 373 223 6 145 516 39 389 5.57e-57 198
Msa0387910 AT3G13920.5 34.048 373 223 6 145 516 43 393 8.28e-57 197
Msa0387910 AT4G09730.1 31.690 426 255 11 144 550 111 519 3.58e-54 195
Msa0387910 AT4G00660.1 30.256 390 246 7 145 532 131 496 5.34e-54 192
Msa0387910 AT4G00660.2 30.256 390 246 7 145 532 131 496 5.34e-54 192
Msa0387910 AT5G11170.1 35.372 376 210 12 168 535 69 419 9.34e-53 187
Msa0387910 AT5G11200.1 35.372 376 210 12 168 535 69 419 9.34e-53 187
Msa0387910 AT5G05450.1 35.427 398 207 17 134 509 13 382 4.34e-52 189
Msa0387910 AT2G45810.1 30.303 396 247 10 145 537 154 523 1.96e-51 186
Msa0387910 AT1G71370.1 35.340 382 214 12 147 514 16 378 3.59e-51 186
Msa0387910 AT3G61240.2 30.366 382 238 9 145 523 124 480 8.01e-51 183
Msa0387910 AT3G61240.1 30.366 382 238 9 145 523 124 480 8.01e-51 183
Msa0387910 AT5G62190.1 34.097 349 220 5 170 518 121 459 1.26e-48 180
Msa0387910 AT5G11170.2 35.278 360 200 12 184 535 2 336 3.33e-48 172
Msa0387910 AT5G11200.3 32.933 416 207 14 168 535 69 460 1.27e-47 174
Msa0387910 AT5G65900.1 33.696 368 217 10 145 505 154 501 2.31e-47 176
Msa0387910 AT5G11200.2 32.019 431 203 14 168 532 69 475 2.49e-47 173
Msa0387910 AT5G08610.1 34.711 363 219 8 169 523 406 758 2.73e-47 178
Msa0387910 AT5G63630.1 34.043 376 222 10 160 523 69 430 1.55e-45 169
Msa0387910 AT5G63630.2 34.043 376 222 10 160 523 263 624 2.36e-45 172
Msa0387910 AT5G08620.1 33.333 369 216 9 169 523 104 456 7.35e-45 168
Msa0387910 AT2G40700.1 27.928 444 244 11 146 521 31 466 8.46e-43 163
Msa0387910 AT1G63250.1 34.670 349 205 12 166 503 349 685 1.88e-42 164
Msa0387910 AT2G07750.1 34.670 349 205 13 166 503 396 732 8.51e-42 162
Msa0387910 AT3G18600.1 30.548 383 238 8 146 521 90 451 4.03e-41 157
Msa0387910 AT5G54910.1 31.401 414 242 15 144 540 70 458 7.94e-40 155
Msa0387910 AT3G16840.2 28.571 434 224 13 156 520 202 618 7.09e-39 153
Msa0387910 AT3G16840.1 28.571 434 224 13 156 520 201 617 7.75e-39 153
Msa0387910 AT3G06980.1 29.114 474 268 17 76 520 326 760 1.20e-37 149
Msa0387910 AT3G53110.1 26.464 461 279 13 113 544 59 488 2.43e-37 145
Msa0387910 AT1G12770.2 27.316 421 255 8 145 521 110 523 5.10e-37 145
Msa0387910 AT1G12770.1 27.316 421 255 8 145 521 110 523 5.10e-37 145
Msa0387910 AT1G71280.2 32.840 338 170 13 147 472 17 309 2.58e-35 136
Msa0387910 AT1G71280.1 32.362 343 175 13 147 477 17 314 5.65e-35 138
Msa0387910 AT5G19210.2 29.121 364 203 13 165 498 96 434 2.66e-29 122
Msa0387910 AT4G15850.1 26.914 405 216 14 183 527 73 457 1.36e-28 120
Msa0387910 AT4G34910.1 27.136 398 234 10 145 499 46 430 1.63e-28 121
Msa0387910 AT1G51380.2 30.213 235 147 5 129 363 8 225 7.05e-28 114
Msa0387910 AT1G51380.4 30.568 229 142 5 129 357 8 219 3.35e-27 112
Msa0387910 AT1G51380.3 30.568 229 142 5 129 357 8 219 5.27e-27 112
Msa0387910 AT1G28180.2 45.299 117 61 1 175 291 3 116 5.79e-23 94.7
Msa0387910 AT5G19210.1 28.049 246 139 9 277 498 46 277 9.83e-17 82.0
Msa0387910 AT5G19210.3 28.049 246 139 9 277 498 46 277 9.83e-17 82.0
Msa0387910 AT1G59990.2 32.203 118 79 1 408 525 427 543 4.18e-14 75.9
Msa0387910 AT1G59990.1 32.203 118 79 1 408 525 427 543 4.22e-14 75.9
Msa0387910 AT1G27880.1 24.167 360 230 11 172 520 274 601 5.22e-12 69.7
Msa0387910 AT1G27880.2 24.167 360 230 11 172 520 274 601 1.09e-11 68.6

Find 245 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGAAACGCCTTCAATTT+TGG 0.107084 3_1:+92012485 None:intergenic
GTCATAATTCCACTGATTAT+TGG 0.169636 3_1:+92011629 None:intergenic
GGTGGTCGTGGTGGTGGTTA+TGG 0.195984 3_1:-92011995 Msa0387910:CDS
GGAAATAGCGGTGGTGGATA+TGG 0.224387 3_1:-92007447 Msa0387910:CDS
GGTGGGTATGGTGGAGGATA+TGG 0.226026 3_1:-92007417 Msa0387910:CDS
ACATAAACCTGCTGGTTTAT+TGG 0.232954 3_1:+92011333 None:intergenic
TATATACTGTCTTAGGTATT+AGG 0.238341 3_1:-92007318 Msa0387910:three_prime_UTR
AAACAAACCTGTATCTCTTT+TGG 0.239901 3_1:+92010529 None:intergenic
GGTGCTGCTGGTGCAGGTGC+TGG 0.248580 3_1:+92012082 None:intergenic
ATAGCATTATATACTGTCTT+AGG 0.248960 3_1:-92007325 Msa0387910:three_prime_UTR
CCTTGCTGGAAGGGATTTGA+TGG 0.252328 3_1:-92011696 Msa0387910:CDS
CAAGCCAACATCATTACTTA+TGG 0.276012 3_1:-92007199 Msa0387910:three_prime_UTR
AACAAATCAACCAGCCTTCC+TGG 0.280880 3_1:+92010715 None:intergenic
GCTTGTGCGCAGACGGGTTC+AGG 0.311912 3_1:-92011674 Msa0387910:CDS
TCCTGCTCCTCTTGAGTAAC+AGG 0.324089 3_1:+92011899 None:intergenic
GTGGTCGTGGTGGTGGTTAT+GGG 0.326186 3_1:-92011994 Msa0387910:CDS
CACATCAGTAGCAACCAATA+TGG 0.326327 3_1:+92007812 None:intergenic
TTCCCAGCAACTACTATTCA+TGG 0.328013 3_1:-92009160 Msa0387910:CDS
GGCTGATAGGATGCTGGATA+TGG 0.328852 3_1:-92010641 Msa0387910:CDS
GGATATGGTGGTGGGTATGC+TGG 0.331530 3_1:-92007402 Msa0387910:CDS
TTCGCTGCACGTTCATCCTT+TGG 0.338007 3_1:-92007570 Msa0387910:CDS
CTTGAACGTACTCAACTCTT+TGG 0.345926 3_1:+92009950 None:intergenic
GCGATCTTCATGGGCTGATT+TGG 0.346074 3_1:-92012230 Msa0387910:CDS
CTCTTGCTGGATGCTTGTAT+TGG 0.346478 3_1:-92006840 Msa0387910:three_prime_UTR
AGGAAGGCTGGTTGATTTGT+TGG 0.354413 3_1:-92010713 Msa0387910:CDS
GAGTTTCACTGTCGATGATT+AGG 0.356718 3_1:-92010681 Msa0387910:CDS
CGTTCAGGTGGAGGCCGATT+TGG 0.358011 3_1:-92007531 Msa0387910:CDS
GCAATTCCGATTTCCCTTGC+TGG 0.358836 3_1:-92011710 Msa0387910:CDS
GGGTATGGTGGAGGATATGG+TGG 0.365974 3_1:-92007414 Msa0387910:CDS
AACTCTTTGGTCAATTAAAT+CGG 0.368348 3_1:+92009963 None:intergenic
TTTCATACCAGACAGGGGTT+AGG 0.368632 3_1:-92011380 Msa0387910:CDS
AGGCGCTTAATCAGAATATT+AGG 0.371626 3_1:-92011772 Msa0387910:CDS
TACATAATCATCAATGTCAT+TGG 0.372997 3_1:+92007734 None:intergenic
TGATGCTTACGAGGATATTC+CGG 0.374320 3_1:-92011858 Msa0387910:CDS
GGAGGAAAGAACCGCCGTTC+AGG 0.376265 3_1:-92007546 Msa0387910:CDS
TGGCGGTGTTGGTGCATTCT+CGG 0.377078 3_1:+92012192 None:intergenic
AGCTTTGACTTTAGTCTTTG+TGG 0.377942 3_1:-92009233 Msa0387910:CDS
GGGAACAGAGGTGGTGGTGG+TGG 0.378906 3_1:-92011974 Msa0387910:CDS
GAAATAGCGGTGGTGGATAT+GGG 0.378936 3_1:-92007446 Msa0387910:CDS
TAATGAAAACAACACATCTA+TGG 0.379843 3_1:-92007655 Msa0387910:CDS
GGGGCTTCTGGTGGGTATGG+TGG 0.380906 3_1:-92007426 Msa0387910:CDS
GCTGGAAATAGCGCCGGTCC+TGG 0.381422 3_1:-92007384 Msa0387910:CDS
GGTGGATATGGGGCTTCTGG+TGG 0.388095 3_1:-92007435 Msa0387910:CDS
ATCTATTCTACCTCAGGCTC+AGG 0.389503 3_1:+92012528 None:intergenic
CATCCTATCAGCCTCATCTA+AGG 0.391228 3_1:+92010651 None:intergenic
CTGGAAATAGCGCCGGTCCT+GGG 0.392227 3_1:-92007383 Msa0387910:CDS
TTGATACTATGCGATCTTCA+TGG 0.393903 3_1:-92012240 Msa0387910:exon
GGTGGTGGATATGGGGCTTC+TGG 0.394612 3_1:-92007438 Msa0387910:CDS
AGCAAATCCATTTGCAGATC+AGG 0.397080 3_1:-92011936 Msa0387910:CDS
TCCCTTCCAGCAAGGGAAAT+CGG 0.397386 3_1:+92011704 None:intergenic
GTTAGGGTGGTTGTTGCTTA+CGG 0.398532 3_1:-92011363 Msa0387910:CDS
TAGAAAGATTGTTGAACAAA+TGG 0.399399 3_1:-92010602 Msa0387910:CDS
TATGGGGCTTCTGGTGGGTA+TGG 0.399921 3_1:-92007429 Msa0387910:CDS
GGAATTGCATGCCGCTGAAC+AGG 0.401326 3_1:+92011725 None:intergenic
GGTGCAGGTGCTGGTGCTGA+AGG 0.405023 3_1:+92012091 None:intergenic
GATGATTATGTACACCGTAT+TGG 0.405202 3_1:-92007723 Msa0387910:CDS
CTGCACAGAGGCCGCCTCGT+GGG 0.405380 3_1:-92011598 Msa0387910:CDS
CGATAACTCCGGATCGCGTT+GGG 0.405949 3_1:-92012053 Msa0387910:CDS
TATGGTGGAGGATATGGTGG+TGG 0.407720 3_1:-92007411 Msa0387910:CDS
ACATCAGTAGCAACCAATAT+GGG 0.412266 3_1:+92007813 None:intergenic
GCTTCTGGTGGGTATGGTGG+AGG 0.413902 3_1:-92007423 Msa0387910:CDS
CTCTTGTTCTCTCGCCAACT+AGG 0.419822 3_1:-92011553 Msa0387910:CDS
GGTGGTGGTGGTCGTGGTGG+TGG 0.423551 3_1:-92012001 Msa0387910:CDS
CCACGAGGCGGCCTCTGTGC+AGG 0.425187 3_1:+92011599 None:intergenic
AGATGAGGAGGAACGTAAAC+AGG 0.426503 3_1:+92012127 None:intergenic
TTCATACCAGACAGGGGTTA+GGG 0.430328 3_1:-92011379 Msa0387910:CDS
TGTTGCAACTCCAGGAAGGC+TGG 0.431189 3_1:-92010725 Msa0387910:CDS
ATGGTGATTACTAACATATT+AGG 0.431590 3_1:-92007084 Msa0387910:three_prime_UTR
CAAGAGGAGCAGGAGAATAC+AGG 0.433370 3_1:-92011890 Msa0387910:CDS
AAAGCAGGTGCTGCTGGTGC+AGG 0.438000 3_1:+92012076 None:intergenic
TTGCTCTTTGTGCATGAAGA+AGG 0.438217 3_1:+92009899 None:intergenic
GCAGCAGAAGGTGGCGGTGT+TGG 0.438885 3_1:+92012181 None:intergenic
TATGGGAACAGAGGTGGTGG+TGG 0.439069 3_1:-92011977 Msa0387910:CDS
TCACCATGAATAGTAGTTGC+TGG 0.448574 3_1:+92009157 None:intergenic
TAGCCTTAGATGAGGCTGAT+AGG 0.448823 3_1:-92010654 Msa0387910:CDS
CTCTCCCTGTCCTTCCAATA+CGG 0.450963 3_1:+92007709 None:intergenic
TTTCTGGCTGTTGGAAGAGT+GGG 0.454670 3_1:-92009994 Msa0387910:CDS
GCCTGTTACTCAAGAGGAGC+AGG 0.456084 3_1:-92011900 Msa0387910:CDS
TCCGATTTCCCTTGCTGGAA+GGG 0.456489 3_1:-92011705 Msa0387910:CDS
GAAAGTCACGGCCACCAAAT+CGG 0.458285 3_1:+92007517 None:intergenic
TTTAACATTTCCTACATGGA+TGG 0.459298 3_1:-92006908 Msa0387910:three_prime_UTR
TTTGATGGCTTGTGCGCAGA+CGG 0.462192 3_1:-92011681 Msa0387910:CDS
GTGGATATGGGGCTTCTGGT+GGG 0.464539 3_1:-92007434 Msa0387910:CDS
AACGATTACCGCGGTGGTGG+TGG 0.465638 3_1:-92012016 Msa0387910:CDS
GACATTCTTGTTGCAACTCC+AGG 0.467487 3_1:-92010733 Msa0387910:CDS
CGGAGGTGCCCAACGCGATC+CGG 0.468791 3_1:+92012045 None:intergenic
AACTTCAAATAAAGAGAGAA+AGG 0.469032 3_1:+92007255 None:intergenic
CAACCACCCTAACCCCTGTC+TGG 0.470522 3_1:+92011373 None:intergenic
ATAGTTTGTCTGACACCTGC+TGG 0.470533 3_1:+92010571 None:intergenic
TCCTGGGGTGACCAGTGCAT+GGG 0.473646 3_1:-92007367 Msa0387910:CDS
GTCCTGGGGTGACCAGTGCA+TGG 0.473952 3_1:-92007368 Msa0387910:CDS
GAATCATCCTGATCTGCAAA+TGG 0.473989 3_1:+92011929 None:intergenic
TGATACTATGCGATCTTCAT+GGG 0.476741 3_1:-92012239 Msa0387910:exon
TGCACAGAGGCCGCCTCGTG+GGG 0.477031 3_1:-92011597 Msa0387910:CDS
GGTTATGGGAACAGAGGTGG+TGG 0.477100 3_1:-92011980 Msa0387910:CDS
CAAAGAGCAAATGGCGTACA+AGG 0.477788 3_1:-92009886 Msa0387910:CDS
AGAAGTTGTGTAGTGTTAGC+AGG 0.478789 3_1:-92007115 Msa0387910:three_prime_UTR
TCGATAACTCCGGATCGCGT+TGG 0.484000 3_1:-92012054 Msa0387910:CDS
GATTACCGCGGTGGTGGTGG+TGG 0.484866 3_1:-92012013 Msa0387910:CDS
AGTCTTTGTGGAGACAAAGA+AGG 0.485926 3_1:-92009221 Msa0387910:CDS
TCATGGTGACAGGTCACAAC+AGG 0.489281 3_1:-92009143 Msa0387910:intron
TTATCGAAAGCAGGTGCTGC+TGG 0.490130 3_1:+92012070 None:intergenic
CTTCATGCACAAAGAGCAAA+TGG 0.491515 3_1:-92009895 Msa0387910:CDS
TGCACTGGTCACCCCAGGAC+CGG 0.491777 3_1:+92007371 None:intergenic
TCCATCCATCCCAAAATTGA+AGG 0.492933 3_1:-92012495 Msa0387910:five_prime_UTR
GAGCTGATGCGCTGGAACAC+TGG 0.498191 3_1:-92009198 Msa0387910:CDS
GAAGCAGCAGCAGAAGGTGG+CGG 0.500887 3_1:+92012175 None:intergenic
ATTTCCTACATGGATGGGTA+AGG 0.502508 3_1:-92006902 Msa0387910:three_prime_UTR
AACTAGGGAGCTATCGATGC+AGG 0.503242 3_1:-92011537 Msa0387910:intron
ACAGGGAGAGCAGGAAAGAA+AGG 0.503939 3_1:-92007696 Msa0387910:CDS
ACATAATCATCAATGTCATT+GGG 0.504262 3_1:+92007735 None:intergenic
GGTGGTTATGGGAACAGAGG+TGG 0.507683 3_1:-92011983 Msa0387910:CDS
TCAGGTGGAGGCCGATTTGG+TGG 0.509412 3_1:-92007528 Msa0387910:CDS
TCCCATGCACTGGTCACCCC+AGG 0.510105 3_1:+92007366 None:intergenic
AAAGAAGGGAGCTGATGCGC+TGG 0.510762 3_1:-92009206 Msa0387910:CDS
GCTGCACGTTCATCCTTTGG+TGG 0.511407 3_1:-92007567 Msa0387910:CDS
AAGAACCGCCGTTCAGGTGG+AGG 0.511872 3_1:-92007540 Msa0387910:CDS
ATGTGGTGAGGGGTTGATTG+AGG 0.514168 3_1:-92006993 Msa0387910:three_prime_UTR
TCAACAATCTTTCTAATCTG+TGG 0.514562 3_1:+92010610 None:intergenic
AGATGTAGAATATGTGGTGA+GGG 0.515636 3_1:-92007004 Msa0387910:three_prime_UTR
TTAACATTTCCTACATGGAT+GGG 0.516854 3_1:-92006907 Msa0387910:three_prime_UTR
GTACACCGTATTGGAAGGAC+AGG 0.521546 3_1:-92007714 Msa0387910:CDS
GCGAACCGCGAGAGCCAAGC+AGG 0.522473 3_1:+92007588 None:intergenic
GCAAAAGTATTCACCGGTGG+AGG 0.524079 3_1:+92011812 None:intergenic
TGTTGGTGCATTCTCGGCCG+CGG 0.525546 3_1:+92012198 None:intergenic
TGACAAGAGAAGCCATCTCA+TGG 0.529627 3_1:-92009923 Msa0387910:CDS
CCACCGCGGTAATCGTTCCT+AGG 0.530683 3_1:+92012022 None:intergenic
TTCCGATTTCCCTTGCTGGA+AGG 0.531502 3_1:-92011706 Msa0387910:CDS
TGCTGAGATTGATTTGGGCG+AGG 0.533864 3_1:-92011792 Msa0387910:CDS
CGCGTTGGGCACCTCCGCCT+AGG 0.535532 3_1:-92012039 Msa0387910:CDS
GGCCGTGACTTTCGAAGAGA+AGG 0.536463 3_1:-92007507 Msa0387910:CDS
TCTTGTTCTCTCGCCAACTA+GGG 0.537140 3_1:-92011552 Msa0387910:CDS
ATACACACCCACATGTCCCT+TGG 0.537196 3_1:+92007160 None:intergenic
CCTGCACAGAGGCCGCCTCG+TGG 0.537603 3_1:-92011599 Msa0387910:CDS
GCACGTTCATCCTTTGGTGG+AGG 0.538128 3_1:-92007564 Msa0387910:CDS
AGGAACGATTACCGCGGTGG+TGG 0.538214 3_1:-92012019 Msa0387910:CDS
GGTTCTGATTACCATGGTGC+AGG 0.539362 3_1:-92007468 Msa0387910:CDS
CACCATGAATAGTAGTTGCT+GGG 0.539374 3_1:+92009158 None:intergenic
CGGTAATCGTTCCTAGGCGG+AGG 0.539400 3_1:+92012028 None:intergenic
GGTGCAGGAAATAGCGGTGG+TGG 0.542275 3_1:-92007453 Msa0387910:CDS
ATTGGAAGGACAGGGAGAGC+AGG 0.544432 3_1:-92007705 Msa0387910:CDS
TGTGTAGTGTTAGCAGGTGT+TGG 0.549428 3_1:-92007109 Msa0387910:three_prime_UTR
TGCATCGATAGCTCCCTAGT+TGG 0.549761 3_1:+92011539 None:intergenic
AGCAAATGGCGTACAAGGAA+AGG 0.550127 3_1:-92009881 Msa0387910:intron
GCTGATAGGATGCTGGATAT+GGG 0.550426 3_1:-92010640 Msa0387910:CDS
TTGATGGCTTGTGCGCAGAC+GGG 0.550920 3_1:-92011680 Msa0387910:CDS
GAAATAACCACCGAAAATGT+TGG 0.551907 3_1:+92007034 None:intergenic
TAAACCATAAGTAATGATGT+TGG 0.554379 3_1:+92007195 None:intergenic
CAAATGGACATGCCTCCAGC+AGG 0.555699 3_1:-92010586 Msa0387910:CDS
GCATTAAGATCATTTAAAAG+TGG 0.555949 3_1:-92007843 Msa0387910:CDS
GAAGGCGCACCCTGAGCCTG+AGG 0.556445 3_1:-92012538 Msa0387910:five_prime_UTR
CATCAAATCCCTTCCAGCAA+GGG 0.556584 3_1:+92011697 None:intergenic
AAGTACCTGCTTGGCTCTCG+CGG 0.562257 3_1:-92007593 Msa0387910:CDS
AATAATCAGTGGAATTATGA+CGG 0.562685 3_1:-92011627 Msa0387910:CDS
CAACTACTATTCATGGTGAC+AGG 0.562813 3_1:-92009153 Msa0387910:CDS
GCTAATCGCCAAGGGACATG+TGG 0.563601 3_1:-92007168 Msa0387910:three_prime_UTR
ACTTCAAATAAAGAGAGAAA+GGG 0.564240 3_1:+92007256 None:intergenic
ATAATCAGTGGAATTATGAC+GGG 0.564273 3_1:-92011626 Msa0387910:CDS
GTGCTGGTGCTGAAGGTCCA+CGG 0.565006 3_1:+92012098 None:intergenic
AAAACCCTGAAAATGGAGAA+AGG 0.565240 3_1:+92012418 None:intergenic
TGGTGGAAATGTTCCTCCAC+CGG 0.566056 3_1:-92011825 Msa0387910:CDS
TTTCCACCACTCGTCTCCAC+CGG 0.568311 3_1:+92011839 None:intergenic
GGGACATGTGGGTGTGTATG+TGG 0.569476 3_1:-92007156 Msa0387910:three_prime_UTR
TGGAAATAGCGCCGGTCCTG+GGG 0.571169 3_1:-92007382 Msa0387910:CDS
TTCAGATACACGAAGAGGCT+AGG 0.571605 3_1:-92011407 Msa0387910:intron
AGATGAGGCTGATAGGATGC+TGG 0.571680 3_1:-92010647 Msa0387910:CDS
ATGGTGGAGGATATGGTGGT+GGG 0.572911 3_1:-92007410 Msa0387910:CDS
CAAATCAAGAAGTACCTGCT+TGG 0.574468 3_1:-92007602 Msa0387910:CDS
GGAAAGAACCGCCGTTCAGG+TGG 0.574475 3_1:-92007543 Msa0387910:CDS
GGGAGAAGATGTAGAATATG+TGG 0.575502 3_1:-92007010 Msa0387910:three_prime_UTR
AACGTAAACAGGTCGAGTGT+TGG 0.575532 3_1:+92012138 None:intergenic
CCATCAAATCCCTTCCAGCA+AGG 0.576291 3_1:+92011696 None:intergenic
GCATGCCGCTGAACAGGTGT+CGG 0.577393 3_1:+92011731 None:intergenic
GCGGTTCTTTCCTCCACCAA+AGG 0.578855 3_1:+92007554 None:intergenic
TTTACGTTCCTCCTCATCTG+AGG 0.579339 3_1:-92012123 Msa0387910:CDS
ATCTCAGCAAAAGTATTCAC+CGG 0.579776 3_1:+92011806 None:intergenic
CATATTGGTTGCTACTGATG+TGG 0.580918 3_1:-92007811 Msa0387910:CDS
GTCTTTGTGGAGACAAAGAA+GGG 0.581107 3_1:-92009220 Msa0387910:CDS
TTAACAGAAGCAGCAGCAGA+AGG 0.586556 3_1:+92012169 None:intergenic
TGGTGCTCCAATAAACCAGC+AGG 0.587302 3_1:-92011340 Msa0387910:intron
AATCATCGACAGTGAAACTC+TGG 0.587863 3_1:+92010684 None:intergenic
ATTATGTACACCGTATTGGA+AGG 0.588871 3_1:-92007719 Msa0387910:CDS
GATCCGGAGTTATCGAAAGC+AGG 0.589393 3_1:+92012061 None:intergenic
TGCAGATCAGGATGATTCTG+AGG 0.590279 3_1:-92011924 Msa0387910:CDS
AAGAGGAGCAGGAGAATACA+GGG 0.591173 3_1:-92011889 Msa0387910:CDS
GGCGAGAGAACAAGAGCAAG+CGG 0.592909 3_1:+92011560 None:intergenic
AACCTTCTCTTCGAAAGTCA+CGG 0.593383 3_1:+92007505 None:intergenic
TGATTTGGCTGCAAATTCCG+CGG 0.593942 3_1:-92012215 Msa0387910:CDS
CATCAGTAGCAACCAATATG+GGG 0.596151 3_1:+92007814 None:intergenic
GGGTATGCTGGAAATAGCGC+CGG 0.598506 3_1:-92007390 Msa0387910:CDS
GTTTACAACGCTAATCGCCA+AGG 0.598686 3_1:-92007177 Msa0387910:three_prime_UTR
AAATAGCGGTGGTGGATATG+GGG 0.603867 3_1:-92007445 Msa0387910:CDS
GAAAATGGAGAAAGGAAGAG+AGG 0.605827 3_1:+92012426 None:intergenic
TGAGGAGCCTGTTACTCAAG+AGG 0.606228 3_1:-92011906 Msa0387910:CDS
GCAATGCCTGCAGGAAAGAG+AGG 0.606656 3_1:-92007868 Msa0387910:intron
ACAGAAGCAGCAGCAGAAGG+TGG 0.609445 3_1:+92012172 None:intergenic
CAGCTACGAGAGCTTGAGAG+AGG 0.609572 3_1:-92010760 Msa0387910:CDS
GCTACTGATGTGGCTGCACG+TGG 0.610943 3_1:-92007801 Msa0387910:CDS
GTGTTAGCAGGTGTTGGCAA+TGG 0.611267 3_1:-92007103 Msa0387910:three_prime_UTR
TTTGTTTCAGATACACGAAG+AGG 0.612799 3_1:-92011412 Msa0387910:intron
AGGGTGGTTGTTGCTTACGG+TGG 0.614559 3_1:-92011360 Msa0387910:CDS
CAAATCGGCCTCCACCTGAA+CGG 0.614709 3_1:+92007532 None:intergenic
GCACCTGCTTTCGATAACTC+CGG 0.616286 3_1:-92012064 Msa0387910:CDS
CTACACAACTTCTATTCGAG+TGG 0.623210 3_1:+92007125 None:intergenic
AAAACCTTACCCATCCATGT+AGG 0.623257 3_1:+92006898 None:intergenic
TACCATGGTGCAGGAAATAG+CGG 0.626118 3_1:-92007459 Msa0387910:CDS
ATTCCGGTGGAGACGAGTGG+TGG 0.627247 3_1:-92011842 Msa0387910:CDS
AAGATGTAGAATATGTGGTG+AGG 0.627675 3_1:-92007005 Msa0387910:three_prime_UTR
TTCTTGTTGCAACTCCAGGA+AGG 0.627799 3_1:-92010729 Msa0387910:CDS
ACGAGAGCTTGAGAGAGGAG+TGG 0.631044 3_1:-92010755 Msa0387910:CDS
CCACGGTTCCTCAGATGAGG+AGG 0.633176 3_1:+92012115 None:intergenic
ATAATTTGAAAGGAAATCAG+AGG 0.635272 3_1:+92010020 None:intergenic
GATGTTGGCTTGAAAACACT+AGG 0.636987 3_1:+92007210 None:intergenic
TCTATTCTACCTCAGGCTCA+GGG 0.637543 3_1:+92012529 None:intergenic
CCTCCTCATCTGAGGAACCG+TGG 0.637971 3_1:-92012115 Msa0387910:CDS
GATAAACTTTGATGCTTACG+AGG 0.638411 3_1:-92011867 Msa0387910:CDS
TGCTTACGAGGATATTCCGG+TGG 0.638728 3_1:-92011855 Msa0387910:CDS
GGTCCACGGTTCCTCAGATG+AGG 0.639824 3_1:+92012112 None:intergenic
CACCGCTATTTCCTGCACCA+TGG 0.641692 3_1:+92007457 None:intergenic
ATACCAGACAGGGGTTAGGG+TGG 0.642202 3_1:-92011376 Msa0387910:CDS
CCTAGGAACGATTACCGCGG+TGG 0.645514 3_1:-92012022 Msa0387910:CDS
AAATGAAATAGAGAAAGAGA+AGG 0.651561 3_1:-92012556 None:intergenic
CATGAAGAAGGTCCATGAGA+TGG 0.654546 3_1:+92009911 None:intergenic
TTGGCTTGAAAACACTAGGA+GGG 0.660677 3_1:+92007214 None:intergenic
ATCGGCCTCCACCTGAACGG+CGG 0.660966 3_1:+92007535 None:intergenic
GTTTGTCTGACACCTGCTGG+AGG 0.661568 3_1:+92010574 None:intergenic
TGAAGCCGACACCTGTTCAG+CGG 0.662139 3_1:-92011736 Msa0387910:CDS
GATATTCCGGTGGAGACGAG+TGG 0.668865 3_1:-92011845 Msa0387910:CDS
AGGGGTGGTTCTGATTACCA+TGG 0.669156 3_1:-92007474 Msa0387910:CDS
GTTGGCTTGAAAACACTAGG+AGG 0.671168 3_1:+92007213 None:intergenic
CTAATCGCCAAGGGACATGT+GGG 0.673532 3_1:-92007167 Msa0387910:three_prime_UTR
TTAACTACATGTGCAACATG+TGG 0.673678 3_1:+92007768 None:intergenic
TTTACAACGCTAATCGCCAA+GGG 0.677411 3_1:-92007176 Msa0387910:three_prime_UTR
CATGGTGCAGGAAATAGCGG+TGG 0.677728 3_1:-92007456 Msa0387910:CDS
GATGTAGAATATGTGGTGAG+GGG 0.683102 3_1:-92007003 Msa0387910:three_prime_UTR
ATCAGTAGCAACCAATATGG+GGG 0.683355 3_1:+92007815 None:intergenic
TAGGTATCTAGCCTTAGATG+AGG 0.687328 3_1:-92010662 Msa0387910:CDS
TCAGCAAAAGTATTCACCGG+TGG 0.697347 3_1:+92011809 None:intergenic
GGTGGTGGTTATGGGAACAG+AGG 0.710981 3_1:-92011986 Msa0387910:CDS
CACACAGTACGCACCCCACG+AGG 0.716973 3_1:+92011584 None:intergenic
ACAGTACGCACCCCACGAGG+CGG 0.717081 3_1:+92011587 None:intergenic
CCGCGGTAATCGTTCCTAGG+CGG 0.719043 3_1:+92012025 None:intergenic
TGACGGGACAGCCTGCACAG+AGG 0.753358 3_1:-92011610 Msa0387910:CDS
TACACCGTATTGGAAGGACA+GGG 0.770780 3_1:-92007713 Msa0387910:CDS
CCGCCTAGGAACGATTACCG+CGG 0.778227 3_1:-92012025 Msa0387910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATGAATATAACAA+TGG + chr3_1:92009555-92009574 None:intergenic 10.0%
!!! AATTTGTTTTAAAAATTGTT+TGG - chr3_1:92011042-92011061 Msa0387910:intron 10.0%
!!! ATGATATTCATTTTAATTTG+TGG - chr3_1:92007846-92007865 Msa0387910:CDS 15.0%
!! ATACGCAAAAAATTAAAAAT+GGG + chr3_1:92008024-92008043 None:intergenic 15.0%
!! TATACGCAAAAAATTAAAAA+TGG + chr3_1:92008025-92008044 None:intergenic 15.0%
!!! TTTGTATTCAAATTTTTGTA+AGG + chr3_1:92008327-92008346 None:intergenic 15.0%
!! ATTCAAAAGTAAAATATGAT+TGG + chr3_1:92008498-92008517 None:intergenic 15.0%
!!! AAAATATAAATGTTTTGTAC+TGG + chr3_1:92008522-92008541 None:intergenic 15.0%
!!! TGTTTTTTTATTATGTGAAA+AGG - chr3_1:92008820-92008839 Msa0387910:intron 15.0%
!!! CTTTTTTCTTTTATAAAATG+TGG - chr3_1:92009634-92009653 Msa0387910:intron 15.0%
!!! ATATTTGTATTGGTATTTTA+GGG - chr3_1:92009835-92009854 Msa0387910:intron 15.0%
!! AGGAAAAATTTAAGAATATA+TGG - chr3_1:92010468-92010487 Msa0387910:intron 15.0%
!! GGAAAAATTTAAGAATATAT+GGG - chr3_1:92010469-92010488 Msa0387910:intron 15.0%
!!! GTAAAATTAACACAAATTTT+AGG - chr3_1:92010742-92010761 Msa0387910:CDS 15.0%
!!! TTTGTAAATTGAACATTTTT+AGG + chr3_1:92010841-92010860 None:intergenic 15.0%
!! ATTCCATTATTTAAATTCTT+AGG - chr3_1:92010987-92011006 Msa0387910:intron 15.0%
!!! TAACATTTTTTACAATTTCT+CGG + chr3_1:92011135-92011154 None:intergenic 15.0%
!! ATTATAAATCAAAAGCAATA+TGG + chr3_1:92011385-92011404 None:intergenic 15.0%
!! AAATGTTTGAATTCGATTTA+TGG - chr3_1:92007057-92007076 Msa0387910:three_prime_UTR 20.0%
!! TTTATCAAAAGTGATTATTC+AGG - chr3_1:92008066-92008085 Msa0387910:intron 20.0%
!! TTTGGTGAAATAATTCAATT+TGG - chr3_1:92008442-92008461 Msa0387910:intron 20.0%
!!! AATAGTGATTCTTATTTGTT+CGG - chr3_1:92009224-92009243 Msa0387910:CDS 20.0%
!! CCAGAAAAATATAATTTGAA+AGG + chr3_1:92009324-92009343 None:intergenic 20.0%
!!! CCTTTCAAATTATATTTTTC+TGG - chr3_1:92009321-92009340 Msa0387910:intron 20.0%
!! AAATGAATATAACAATGGAA+AGG + chr3_1:92009550-92009569 None:intergenic 20.0%
!!! TTAAAATCATTTAAGTTTGC+TGG + chr3_1:92009676-92009695 None:intergenic 20.0%
!! AAATCTGTATAAATTCAATC+TGG - chr3_1:92009723-92009742 Msa0387910:intron 20.0%
!!! CATATTTGTATTGGTATTTT+AGG - chr3_1:92009834-92009853 Msa0387910:intron 20.0%
!! AAAGAAAATTGAGAAAACAT+GGG + chr3_1:92010301-92010320 None:intergenic 20.0%
!! AAAAGAAAATTGAGAAAACA+TGG + chr3_1:92010302-92010321 None:intergenic 20.0%
!!! TAAATTTTTCCTAATACAGT+AGG + chr3_1:92010460-92010479 None:intergenic 20.0%
!!! TTTAAATAATGGAATGCAAA+TGG + chr3_1:92010982-92011001 None:intergenic 20.0%
!! GTTCCTAAGAATTTAAATAA+TGG + chr3_1:92010993-92011012 None:intergenic 20.0%
!!! AACATTTTTTACAATTTCTC+GGG + chr3_1:92011134-92011153 None:intergenic 20.0%
!! ACATAGGTAATTTAGTTATT+AGG - chr3_1:92011255-92011274 Msa0387910:intron 20.0%
!!! TTATTTTTGAGAGCATTTTT+AGG - chr3_1:92011407-92011426 Msa0387910:intron 20.0%
!!! TATTTTTGAGAGCATTTTTA+GGG - chr3_1:92011408-92011427 Msa0387910:intron 20.0%
!! AAAAAATAAATCTATAGGTG+TGG + chr3_1:92012053-92012072 None:intergenic 20.0%
! AAAAATATCTATTCTACCTC+AGG + chr3_1:92006812-92006831 None:intergenic 25.0%
! AAAAAGTAAAACCCTGAAAA+TGG + chr3_1:92006923-92006942 None:intergenic 25.0%
!!! TTACTTTTTCATTTCAACAC+AGG - chr3_1:92006934-92006953 Msa0387910:three_prime_UTR 25.0%
!!! TTTTGTTTTCCAATAATCAG+TGG - chr3_1:92007693-92007712 Msa0387910:CDS 25.0%
! AATAATCAGTGGAATTATGA+CGG - chr3_1:92007704-92007723 Msa0387910:CDS 25.0%
!!! TTGTTGATTTCGTTCTTATT+TGG - chr3_1:92008424-92008443 Msa0387910:intron 25.0%
! TAGAAAGATTGTTGAACAAA+TGG - chr3_1:92008729-92008748 Msa0387910:intron 25.0%
! ATTACACACACATATATGAA+AGG + chr3_1:92008861-92008880 None:intergenic 25.0%
! GATTTCAAACAACATTCAAT+AGG + chr3_1:92009044-92009063 None:intergenic 25.0%
!! TTTCTAAGAATTAAGATGGA+AGG + chr3_1:92009129-92009148 None:intergenic 25.0%
! TTCCATCTTAATTCTTAGAA+AGG - chr3_1:92009128-92009147 Msa0387910:intron 25.0%
!! AACCTTTCTAAGAATTAAGA+TGG + chr3_1:92009133-92009152 None:intergenic 25.0%
! ATAATTTGAAAGGAAATCAG+AGG + chr3_1:92009314-92009333 None:intergenic 25.0%
!!! AATTATATTTTTCTGGCTGT+TGG - chr3_1:92009328-92009347 Msa0387910:intron 25.0%
! AACTCTTTGGTCAATTAAAT+CGG + chr3_1:92009371-92009390 None:intergenic 25.0%
! TGTATAAATTCAATCTGGAT+GGG - chr3_1:92009728-92009747 Msa0387910:intron 25.0%
! GTTGTATGTCATATTTGTAT+TGG - chr3_1:92009825-92009844 Msa0387910:intron 25.0%
! AATTAAGACAACAGATTGTA+TGG + chr3_1:92009865-92009884 None:intergenic 25.0%
! ACTGTTATAAAGACAGATAA+AGG + chr3_1:92010227-92010246 None:intergenic 25.0%
! TCAAAAACCTTAAACTTACA+TGG + chr3_1:92010257-92010276 None:intergenic 25.0%
! AATGTATTCACAAAGTAAAC+AGG + chr3_1:92010536-92010555 None:intergenic 25.0%
! GTAAAACTAACACAAAATTC+AGG + chr3_1:92010573-92010592 None:intergenic 25.0%
!!! GTACAATTGTTCACATTTTT+TGG - chr3_1:92010625-92010644 Msa0387910:CDS 25.0%
!!! AACAATTGTGTGCATTTTTT+TGG + chr3_1:92010689-92010708 None:intergenic 25.0%
! AAAAATGTTCTCACAGTAAT+TGG - chr3_1:92010771-92010790 Msa0387910:intron 25.0%
! AAAATGTTCTCACAGTAATT+GGG - chr3_1:92010772-92010791 Msa0387910:intron 25.0%
! TTATGTGAAACTTATGCTTT+AGG + chr3_1:92010866-92010885 None:intergenic 25.0%
!!! TTCCTTTTTTAACAAGTGTT+TGG - chr3_1:92011094-92011113 Msa0387910:intron 25.0%
!! AACCAAACACTTGTTAAAAA+AGG + chr3_1:92011099-92011118 None:intergenic 25.0%
!!! ACATTTTTTACAATTTCTCG+GGG + chr3_1:92011133-92011152 None:intergenic 25.0%
!!! CTTTTTTTTAATGGCTTTCA+AGG + chr3_1:92011160-92011179 None:intergenic 25.0%
! TGAAAGCCATTAAAAAAAAG+TGG - chr3_1:92011160-92011179 Msa0387910:intron 25.0%
!!! CACAAACCACTTTTTTTTAA+TGG + chr3_1:92011169-92011188 None:intergenic 25.0%
!! TTAAAAAAAAGTGGTTTGTG+TGG - chr3_1:92011169-92011188 Msa0387910:intron 25.0%
! CAACTCTAATATGAATACAT+AGG - chr3_1:92011239-92011258 Msa0387910:intron 25.0%
! GCATTAAGATCATTTAAAAG+TGG - chr3_1:92011488-92011507 Msa0387910:intron 25.0%
! ACATAATCATCAATGTCATT+GGG + chr3_1:92011599-92011618 None:intergenic 25.0%
! TACATAATCATCAATGTCAT+TGG + chr3_1:92011600-92011619 None:intergenic 25.0%
! TAATGAAAACAACACATCTA+TGG - chr3_1:92011676-92011695 Msa0387910:CDS 25.0%
! ATAGCATTATATACTGTCTT+AGG - chr3_1:92012006-92012025 Msa0387910:CDS 25.0%
! TATATACTGTCTTAGGTATT+AGG - chr3_1:92012013-92012032 Msa0387910:CDS 25.0%
! GGGAGAAAAAATAAATCTAT+AGG + chr3_1:92012058-92012077 None:intergenic 25.0%
! ACTTCAAATAAAGAGAGAAA+GGG + chr3_1:92012078-92012097 None:intergenic 25.0%
! AACTTCAAATAAAGAGAGAA+AGG + chr3_1:92012079-92012098 None:intergenic 25.0%
! TAAACCATAAGTAATGATGT+TGG + chr3_1:92012139-92012158 None:intergenic 25.0%
! ATGGTGATTACTAACATATT+AGG - chr3_1:92012247-92012266 Msa0387910:intron 25.0%
!!! TCATTTTAACATTTCCTACA+TGG - chr3_1:92012419-92012438 Msa0387910:five_prime_UTR 25.0%
!!! TAAGGTTTTGTAATAGTTAG+TGG - chr3_1:92012447-92012466 Msa0387910:five_prime_UTR 25.0%
! AAAGAAACGCCTTCAATTTT+GGG + chr3_1:92006848-92006867 None:intergenic 30.0%
! AAAAGAAACGCCTTCAATTT+TGG + chr3_1:92006849-92006868 None:intergenic 30.0%
AATTCGATTTATGGAGTCTT+AGG - chr3_1:92007066-92007085 Msa0387910:three_prime_UTR 30.0%
! TACTTTTGCTGAGATTGATT+TGG - chr3_1:92007533-92007552 Msa0387910:CDS 30.0%
!! ACTTTTGCTGAGATTGATTT+GGG - chr3_1:92007534-92007553 Msa0387910:CDS 30.0%
! GTCATAATTCCACTGATTAT+TGG + chr3_1:92007705-92007724 None:intergenic 30.0%
ATAATCAGTGGAATTATGAC+GGG - chr3_1:92007705-92007724 Msa0387910:CDS 30.0%
AAGCATTATACCATTAGGTT+GGG + chr3_1:92008176-92008195 None:intergenic 30.0%
TAAGCATTATACCATTAGGT+TGG + chr3_1:92008177-92008196 None:intergenic 30.0%
CAACTAAGCATTATACCATT+AGG + chr3_1:92008181-92008200 None:intergenic 30.0%
!!! TGTTGATTCTGAATCTTTTG+TGG - chr3_1:92008221-92008240 Msa0387910:intron 30.0%
AAAACCTTGAATGTGACTTA+TGG + chr3_1:92008269-92008288 None:intergenic 30.0%
!!! GGTTTTGTTTTGTATATCAG+AGG - chr3_1:92008283-92008302 Msa0387910:intron 30.0%
TCAACAATCTTTCTAATCTG+TGG + chr3_1:92008724-92008743 None:intergenic 30.0%
! AAACAAACCTGTATCTCTTT+TGG + chr3_1:92008805-92008824 None:intergenic 30.0%
!! GATATGTCTAATTTGAGTTG+AGG - chr3_1:92009177-92009196 Msa0387910:CDS 30.0%
ATCACTATTTATATACCTCC+AGG + chr3_1:92009213-92009232 None:intergenic 30.0%
!! CCAAAAACACAGTTTTATAG+AGG + chr3_1:92009505-92009524 None:intergenic 30.0%
! CCTCTATAAAACTGTGTTTT+TGG - chr3_1:92009502-92009521 Msa0387910:intron 30.0%
CTGTATAAATTCAATCTGGA+TGG - chr3_1:92009727-92009746 Msa0387910:intron 30.0%
AAGAAGACCATGTAAGTTTA+AGG - chr3_1:92010247-92010266 Msa0387910:intron 30.0%
ACACAAATATATAGGAGAGA+CGG + chr3_1:92010430-92010449 None:intergenic 30.0%
CTCTCCTATATATTTGTGTT+TGG - chr3_1:92010431-92010450 Msa0387910:intron 30.0%
GTAGCCAAACACAAATATAT+AGG + chr3_1:92010438-92010457 None:intergenic 30.0%
TATATGTCTGACAACTTGAT+TGG + chr3_1:92010499-92010518 None:intergenic 30.0%
!!! GTTAGTTTTACTTGCTAACA+AGG - chr3_1:92010582-92010601 Msa0387910:CDS 30.0%
AAAATATGCATGACAATACG+TGG - chr3_1:92010815-92010834 Msa0387910:intron 30.0%
AGCATAAGTTTCACATAAGA+TGG - chr3_1:92010868-92010887 Msa0387910:intron 30.0%
CTTATGTCAACTTATGCTTT+AGG + chr3_1:92010912-92010931 None:intergenic 30.0%
! AAGCATAAGTTGACATAAGA+TGG - chr3_1:92010913-92010932 Msa0387910:intron 30.0%
! AGCATAAGTTGACATAAGAT+GGG - chr3_1:92010914-92010933 Msa0387910:intron 30.0%
AAAGAATACTTGAAGGAATC+AGG + chr3_1:92011015-92011034 None:intergenic 30.0%
CCTAGTAAAAGAATACTTGA+AGG + chr3_1:92011022-92011041 None:intergenic 30.0%
! CCTTCAAGTATTCTTTTACT+AGG - chr3_1:92011019-92011038 Msa0387910:intron 30.0%
TGTCTCAAGGTTAATGTTAT+TGG - chr3_1:92011343-92011362 Msa0387910:CDS 30.0%
GTATATATGTTCCTCATACT+TGG - chr3_1:92011441-92011460 Msa0387910:intron 30.0%
! AAGAGAAGGTTCTTTTAGTA+GGG - chr3_1:92011838-92011857 Msa0387910:CDS 30.0%
! CTTTCTGTAACCAACATTTT+CGG - chr3_1:92012287-92012306 Msa0387910:intron 30.0%
! AACATTTTCGGTGGTTATTT+CGG - chr3_1:92012299-92012318 Msa0387910:intron 30.0%
TTTAACATTTCCTACATGGA+TGG - chr3_1:92012423-92012442 Msa0387910:five_prime_UTR 30.0%
TTAACATTTCCTACATGGAT+GGG - chr3_1:92012424-92012443 Msa0387910:five_prime_UTR 30.0%
!! GTTTCTTTTGCTGTCGTTTA+GGG - chr3_1:92006860-92006879 Msa0387910:three_prime_UTR 35.0%
! TCTTCCTTTCTCCATTTTCA+GGG - chr3_1:92006909-92006928 Msa0387910:three_prime_UTR 35.0%
AAAACCCTGAAAATGGAGAA+AGG + chr3_1:92006916-92006935 None:intergenic 35.0%
TTGATACTATGCGATCTTCA+TGG - chr3_1:92007091-92007110 Msa0387910:three_prime_UTR 35.0%
TGATACTATGCGATCTTCAT+GGG - chr3_1:92007092-92007111 Msa0387910:three_prime_UTR 35.0%
GATAAACTTTGATGCTTACG+AGG - chr3_1:92007464-92007483 Msa0387910:CDS 35.0%
!! ATCTCAGCAAAAGTATTCAC+CGG + chr3_1:92007528-92007547 None:intergenic 35.0%
AGGCGCTTAATCAGAATATT+AGG - chr3_1:92007559-92007578 Msa0387910:CDS 35.0%
TTTGTTTCAGATACACGAAG+AGG - chr3_1:92007919-92007938 Msa0387910:intron 35.0%
!! ACATAAACCTGCTGGTTTAT+TGG + chr3_1:92008001-92008020 None:intergenic 35.0%
!! CTGTATCTCTTTTGGAAAAG+TGG + chr3_1:92008797-92008816 None:intergenic 35.0%
! CACTTTTCCAAAAGAGATAC+AGG - chr3_1:92008795-92008814 Msa0387910:intron 35.0%
TCTAGCTGTTCTACTTCATT+GGG - chr3_1:92008900-92008919 Msa0387910:intron 35.0%
CAAATGTATCCATAGAGACA+AGG + chr3_1:92008961-92008980 None:intergenic 35.0%
AATAGGTGCATCTCTCTAAA+TGG + chr3_1:92009027-92009046 None:intergenic 35.0%
AAGAACACCAGATGCAAATA+TGG + chr3_1:92009091-92009110 None:intergenic 35.0%
! GTGCTGTTAGAGTTAAATAG+TGG - chr3_1:92009155-92009174 Msa0387910:CDS 35.0%
!! CGTACAAGGAAAGGTATTAT+CGG - chr3_1:92009459-92009478 Msa0387910:intron 35.0%
ATACATGCAGCAGTGTTAAA+CGG + chr3_1:92009590-92009609 None:intergenic 35.0%
CTGCATGTATGCATTTATCT+GGG - chr3_1:92009600-92009619 Msa0387910:intron 35.0%
GCATCGTGTGCTTAAAAAAA+GGG + chr3_1:92009778-92009797 None:intergenic 35.0%
TGCATCGTGTGCTTAAAAAA+AGG + chr3_1:92009779-92009798 None:intergenic 35.0%
! AGTTGCACATATATTTCTGC+TGG - chr3_1:92009948-92009967 Msa0387910:CDS 35.0%
! GAGTTTATTCTCTGAGAAAC+AGG + chr3_1:92010038-92010057 None:intergenic 35.0%
GACTATTGCATGCTTTACTT+TGG - chr3_1:92010064-92010083 Msa0387910:intron 35.0%
! AGCTTTGACTTTAGTCTTTG+TGG - chr3_1:92010098-92010117 Msa0387910:intron 35.0%
GTAAAAGTTTGCAATGCTCT+TGG - chr3_1:92010322-92010341 Msa0387910:intron 35.0%
GAAAGCAGTGGAAAATTCAT+GGG - chr3_1:92010344-92010363 Msa0387910:intron 35.0%
TATATAGGAGAGACGGTTAA+TGG + chr3_1:92010423-92010442 None:intergenic 35.0%
! GCATAAGTTGACATAAGATG+GGG - chr3_1:92010915-92010934 Msa0387910:intron 35.0%
! TTTGGTTCACATGAAGCATA+AGG - chr3_1:92011060-92011079 Msa0387910:intron 35.0%
ATATGGATCATTGACGATGA+TGG - chr3_1:92011204-92011223 Msa0387910:intron 35.0%
TATGGATCATTGACGATGAT+GGG - chr3_1:92011205-92011224 Msa0387910:intron 35.0%
ACATCAGTAGCAACCAATAT+GGG + chr3_1:92011521-92011540 None:intergenic 35.0%
TTAACTACATGTGCAACATG+TGG + chr3_1:92011566-92011585 None:intergenic 35.0%
GATGATTATGTACACCGTAT+TGG - chr3_1:92011608-92011627 Msa0387910:CDS 35.0%
ATTATGTACACCGTATTGGA+AGG - chr3_1:92011612-92011631 Msa0387910:CDS 35.0%
! GAAGAGAAGGTTCTTTTAGT+AGG - chr3_1:92011837-92011856 Msa0387910:CDS 35.0%
! AGAGAAGGTTCTTTTAGTAG+GGG - chr3_1:92011839-92011858 Msa0387910:CDS 35.0%
CAAGCCAACATCATTACTTA+TGG - chr3_1:92012132-92012151 Msa0387910:CDS 35.0%
GAAATAACCACCGAAAATGT+TGG + chr3_1:92012300-92012319 None:intergenic 35.0%
!! ACATTTTCGGTGGTTATTTC+GGG - chr3_1:92012300-92012319 Msa0387910:intron 35.0%
AAGATGTAGAATATGTGGTG+AGG - chr3_1:92012326-92012345 Msa0387910:intron 35.0%
AGATGTAGAATATGTGGTGA+GGG - chr3_1:92012327-92012346 Msa0387910:intron 35.0%
GAATGAAAAAGTTCTCTTGC+TGG - chr3_1:92012478-92012497 Msa0387910:five_prime_UTR 35.0%
TCCATCCATCCCAAAATTGA+AGG - chr3_1:92006836-92006855 Msa0387910:three_prime_UTR 40.0%
!! AAACGCCTTCAATTTTGGGA+TGG + chr3_1:92006844-92006863 None:intergenic 40.0%
!! CGTTTCTTTTGCTGTCGTTT+AGG - chr3_1:92006859-92006878 Msa0387910:three_prime_UTR 40.0%
GAAAATGGAGAAAGGAAGAG+AGG + chr3_1:92006908-92006927 None:intergenic 40.0%
! CTCTTCCTTTCTCCATTTTC+AGG - chr3_1:92006908-92006927 Msa0387910:three_prime_UTR 40.0%
AGCAAATCCATTTGCAGATC+AGG - chr3_1:92007395-92007414 Msa0387910:CDS 40.0%
GAATCATCCTGATCTGCAAA+TGG + chr3_1:92007405-92007424 None:intergenic 40.0%
TGATGCTTACGAGGATATTC+CGG - chr3_1:92007473-92007492 Msa0387910:CDS 40.0%
! AGGAAGTTTTCATACCAGAC+AGG - chr3_1:92007944-92007963 Msa0387910:intron 40.0%
! GGAAGTTTTCATACCAGACA+GGG - chr3_1:92007945-92007964 Msa0387910:intron 40.0%
! GAAGTTTTCATACCAGACAG+GGG - chr3_1:92007946-92007965 Msa0387910:intron 40.0%
AAAATGGGACATAAACCTGC+TGG + chr3_1:92008009-92008028 None:intergenic 40.0%
!! ATTAGGTTGGGTTAGCTATG+TGG + chr3_1:92008164-92008183 None:intergenic 40.0%
ACATAGCTAACCCAACCTAA+TGG - chr3_1:92008163-92008182 Msa0387910:intron 40.0%
CTGTCCATAAGTCACATTCA+AGG - chr3_1:92008262-92008281 Msa0387910:intron 40.0%
GTCATTCAAGAACAATACGC+TGG + chr3_1:92008476-92008495 None:intergenic 40.0%
AATCATCGACAGTGAAACTC+TGG + chr3_1:92008650-92008669 None:intergenic 40.0%
GAGTTTCACTGTCGATGATT+AGG - chr3_1:92008650-92008669 Msa0387910:intron 40.0%
!! TAGGTATCTAGCCTTAGATG+AGG - chr3_1:92008669-92008688 Msa0387910:intron 40.0%
CTCTAGCTGTTCTACTTCAT+TGG - chr3_1:92008899-92008918 Msa0387910:intron 40.0%
CTAGCTGTTCTACTTCATTG+GGG - chr3_1:92008901-92008920 Msa0387910:intron 40.0%
ATGTATCCATAGAGACAAGG+AGG + chr3_1:92008958-92008977 None:intergenic 40.0%
GTGCATTCCATATTTGCATC+TGG - chr3_1:92009081-92009100 Msa0387910:intron 40.0%
TAAGATGGAAGGAGCAATTG+AGG + chr3_1:92009118-92009137 None:intergenic 40.0%
AGTTGAGGCAATAAATTGCC+TGG - chr3_1:92009192-92009211 Msa0387910:CDS 40.0%
CTTGAACGTACTCAACTCTT+TGG + chr3_1:92009384-92009403 None:intergenic 40.0%
TTGCTCTTTGTGCATGAAGA+AGG + chr3_1:92009435-92009454 None:intergenic 40.0%
CTTCATGCACAAAGAGCAAA+TGG - chr3_1:92009436-92009455 Msa0387910:intron 40.0%
GCTGCATGTATGCATTTATC+TGG - chr3_1:92009599-92009618 Msa0387910:intron 40.0%
TCGTGTGCTTAAAAAAAGGG+TGG + chr3_1:92009775-92009794 None:intergenic 40.0%
AATATATGTGCAACTGCCAG+AGG + chr3_1:92009943-92009962 None:intergenic 40.0%
! CACATATATTTCTGCTGGTG+TGG - chr3_1:92009953-92009972 Msa0387910:CDS 40.0%
GGTGTGGAAGAAATATAGCT+AGG - chr3_1:92009969-92009988 Msa0387910:CDS 40.0%
AGTCTTTGTGGAGACAAAGA+AGG - chr3_1:92010110-92010129 Msa0387910:intron 40.0%
GTCTTTGTGGAGACAAAGAA+GGG - chr3_1:92010111-92010130 Msa0387910:intron 40.0%
TTCCCAGCAACTACTATTCA+TGG - chr3_1:92010171-92010190 Msa0387910:intron 40.0%
CACCATGAATAGTAGTTGCT+GGG + chr3_1:92010176-92010195 None:intergenic 40.0%
TCACCATGAATAGTAGTTGC+TGG + chr3_1:92010177-92010196 None:intergenic 40.0%
CAACTACTATTCATGGTGAC+AGG - chr3_1:92010178-92010197 Msa0387910:intron 40.0%
GGAAAGCAGTGGAAAATTCA+TGG - chr3_1:92010343-92010362 Msa0387910:intron 40.0%
! TGAGGTAACCTTTTCGTGTT+TGG - chr3_1:92010371-92010390 Msa0387910:intron 40.0%
!! AACCTTTTCGTGTTTGGAGT+TGG - chr3_1:92010377-92010396 Msa0387910:intron 40.0%
!! AGTTGGTGAAGTGTCAAGTT+GGG - chr3_1:92010394-92010413 Msa0387910:intron 40.0%
GTTTGGCTACCTACTGTATT+AGG - chr3_1:92010448-92010467 Msa0387910:intron 40.0%
ATGGATCATTGACGATGATG+GGG - chr3_1:92011206-92011225 Msa0387910:intron 40.0%
TACCATAGACAAGAGTTCTG+GGG + chr3_1:92011298-92011317 None:intergenic 40.0%
CTACCATAGACAAGAGTTCT+GGG + chr3_1:92011299-92011318 None:intergenic 40.0%
ACTACCATAGACAAGAGTTC+TGG + chr3_1:92011300-92011319 None:intergenic 40.0%
ATCAGTAGCAACCAATATGG+GGG + chr3_1:92011519-92011538 None:intergenic 40.0%
CATCAGTAGCAACCAATATG+GGG + chr3_1:92011520-92011539 None:intergenic 40.0%
CACATCAGTAGCAACCAATA+TGG + chr3_1:92011522-92011541 None:intergenic 40.0%
! CATATTGGTTGCTACTGATG+TGG - chr3_1:92011520-92011539 Msa0387910:intron 40.0%
!! CAAATCAAGAAGTACCTGCT+TGG - chr3_1:92011729-92011748 Msa0387910:CDS 40.0%
AACCTTCTCTTCGAAAGTCA+CGG + chr3_1:92011829-92011848 None:intergenic 40.0%
! TTGGCTTGAAAACACTAGGA+GGG + chr3_1:92012120-92012139 None:intergenic 40.0%
!! GATGTTGGCTTGAAAACACT+AGG + chr3_1:92012124-92012143 None:intergenic 40.0%
TTTACAACGCTAATCGCCAA+GGG - chr3_1:92012155-92012174 Msa0387910:CDS 40.0%
CTACACAACTTCTATTCGAG+TGG + chr3_1:92012209-92012228 None:intergenic 40.0%
AGAAGTTGTGTAGTGTTAGC+AGG - chr3_1:92012216-92012235 Msa0387910:CDS 40.0%
! TCTGTAACCAACATTTTCGG+TGG - chr3_1:92012290-92012309 Msa0387910:intron 40.0%
!! CATTTTCGGTGGTTATTTCG+GGG - chr3_1:92012301-92012320 Msa0387910:intron 40.0%
GGGAGAAGATGTAGAATATG+TGG - chr3_1:92012321-92012340 Msa0387910:intron 40.0%
GATGTAGAATATGTGGTGAG+GGG - chr3_1:92012328-92012347 Msa0387910:intron 40.0%
ATTTCCTACATGGATGGGTA+AGG - chr3_1:92012429-92012448 Msa0387910:five_prime_UTR 40.0%
AAAACCTTACCCATCCATGT+AGG + chr3_1:92012436-92012455 None:intergenic 40.0%
TCTATTCTACCTCAGGCTCA+GGG + chr3_1:92006805-92006824 None:intergenic 45.0%
ATCTATTCTACCTCAGGCTC+AGG + chr3_1:92006806-92006825 None:intergenic 45.0%
!!! GCCTTCAATTTTGGGATGGA+TGG + chr3_1:92006840-92006859 None:intergenic 45.0%
GAGAGAGAAGAGAGAGAAGA+AGG + chr3_1:92006962-92006981 None:intergenic 45.0%
! TGATTTGGCTGCAAATTCCG+CGG - chr3_1:92007116-92007135 Msa0387910:three_prime_UTR 45.0%
TTAACAGAAGCAGCAGCAGA+AGG + chr3_1:92007165-92007184 None:intergenic 45.0%
AACGTAAACAGGTCGAGTGT+TGG + chr3_1:92007196-92007215 None:intergenic 45.0%
AGATGAGGAGGAACGTAAAC+AGG + chr3_1:92007207-92007226 None:intergenic 45.0%
TTTACGTTCCTCCTCATCTG+AGG - chr3_1:92007208-92007227 Msa0387910:three_prime_UTR 45.0%
TGCAGATCAGGATGATTCTG+AGG - chr3_1:92007407-92007426 Msa0387910:CDS 45.0%
AAGAGGAGCAGGAGAATACA+GGG - chr3_1:92007442-92007461 Msa0387910:CDS 45.0%
!! TCAGCAAAAGTATTCACCGG+TGG + chr3_1:92007525-92007544 None:intergenic 45.0%
CATCAAATCCCTTCCAGCAA+GGG + chr3_1:92007637-92007656 None:intergenic 45.0%
TCTTGTTCTCTCGCCAACTA+GGG - chr3_1:92007779-92007798 Msa0387910:CDS 45.0%
TTCAGATACACGAAGAGGCT+AGG - chr3_1:92007924-92007943 Msa0387910:intron 45.0%
TTTCATACCAGACAGGGGTT+AGG - chr3_1:92007951-92007970 Msa0387910:intron 45.0%
TTCATACCAGACAGGGGTTA+GGG - chr3_1:92007952-92007971 Msa0387910:intron 45.0%
! GTTAGGGTGGTTGTTGCTTA+CGG - chr3_1:92007968-92007987 Msa0387910:intron 45.0%
GACATTCTTGTTGCAACTCC+AGG - chr3_1:92008598-92008617 Msa0387910:intron 45.0%
TTCTTGTTGCAACTCCAGGA+AGG - chr3_1:92008602-92008621 Msa0387910:intron 45.0%
AACAAATCAACCAGCCTTCC+TGG + chr3_1:92008619-92008638 None:intergenic 45.0%
!! AGGAAGGCTGGTTGATTTGT+TGG - chr3_1:92008618-92008637 Msa0387910:intron 45.0%
! TAGCCTTAGATGAGGCTGAT+AGG - chr3_1:92008677-92008696 Msa0387910:intron 45.0%
CATCCTATCAGCCTCATCTA+AGG + chr3_1:92008683-92008702 None:intergenic 45.0%
GCTGATAGGATGCTGGATAT+GGG - chr3_1:92008691-92008710 Msa0387910:intron 45.0%
! ATAGTTTGTCTGACACCTGC+TGG + chr3_1:92008763-92008782 None:intergenic 45.0%
AGACAAGGAGGCAAGAAAAG+CGG + chr3_1:92008946-92008965 None:intergenic 45.0%
TTCTTGCCTCCTTGTCTCTA+TGG - chr3_1:92008949-92008968 Msa0387910:intron 45.0%
TGAGGCAATAAATTGCCTGG+AGG - chr3_1:92009195-92009214 Msa0387910:CDS 45.0%
!!! TTTTCTGGCTGTTGGAAGAG+TGG - chr3_1:92009336-92009355 Msa0387910:intron 45.0%
!! TTTCTGGCTGTTGGAAGAGT+GGG - chr3_1:92009337-92009356 Msa0387910:intron 45.0%
TGACAAGAGAAGCCATCTCA+TGG - chr3_1:92009408-92009427 Msa0387910:intron 45.0%
CATGAAGAAGGTCCATGAGA+TGG + chr3_1:92009423-92009442 None:intergenic 45.0%
CAAAGAGCAAATGGCGTACA+AGG - chr3_1:92009445-92009464 Msa0387910:intron 45.0%
AGCAAATGGCGTACAAGGAA+AGG - chr3_1:92009450-92009469 Msa0387910:intron 45.0%
!! TCAATCTGGATGGGTTGTTC+TGG - chr3_1:92009737-92009756 Msa0387910:intron 45.0%
AGAGCTAAGACAGACAGACA+AGG + chr3_1:92009905-92009924 None:intergenic 45.0%
GGAAAATTCATGGGTGTGTG+AGG - chr3_1:92010353-92010372 Msa0387910:intron 45.0%
CACCAACTCCAAACACGAAA+AGG + chr3_1:92010382-92010401 None:intergenic 45.0%
!! GAGTTGGTGAAGTGTCAAGT+TGG - chr3_1:92010393-92010412 Msa0387910:intron 45.0%
CATGACAATATGCAGGCTTG+TGG - chr3_1:92010942-92010961 Msa0387910:intron 45.0%
ACAATATGCAGGCTTGTGGA+TGG - chr3_1:92010946-92010965 Msa0387910:intron 45.0%
TGTGGAGCACAAGCATCATA+TGG - chr3_1:92011187-92011206 Msa0387910:intron 45.0%
! TGGATCATTGACGATGATGG+GGG - chr3_1:92011207-92011226 Msa0387910:intron 45.0%
! ACCATAGACAAGAGTTCTGG+GGG + chr3_1:92011297-92011316 None:intergenic 45.0%
GCAACAGCTATGTTGTCTCA+AGG - chr3_1:92011330-92011349 Msa0387910:intron 45.0%
TACACCGTATTGGAAGGACA+GGG - chr3_1:92011618-92011637 Msa0387910:CDS 45.0%
! GAAGGTTCTTTTAGTAGGGG+TGG - chr3_1:92011842-92011861 Msa0387910:CDS 45.0%
TACCATGGTGCAGGAAATAG+CGG - chr3_1:92011872-92011891 Msa0387910:CDS 45.0%
!! GAAATAGCGGTGGTGGATAT+GGG - chr3_1:92011885-92011904 Msa0387910:CDS 45.0%
!! AAATAGCGGTGGTGGATATG+GGG - chr3_1:92011886-92011905 Msa0387910:CDS 45.0%
GAAAAATCAGTCCCATGCAC+TGG + chr3_1:92011978-92011997 None:intergenic 45.0%
!! GTTGGCTTGAAAACACTAGG+AGG + chr3_1:92012121-92012140 None:intergenic 45.0%
GTTTACAACGCTAATCGCCA+AGG - chr3_1:92012154-92012173 Msa0387910:CDS 45.0%
TGTGTAGTGTTAGCAGGTGT+TGG - chr3_1:92012222-92012241 Msa0387910:CDS 45.0%
CTCTTGCTGGATGCTTGTAT+TGG - chr3_1:92012491-92012510 Msa0387910:five_prime_UTR 45.0%
! GCGATCTTCATGGGCTGATT+TGG - chr3_1:92007101-92007120 Msa0387910:three_prime_UTR 50.0%
! TTATCGAAAGCAGGTGCTGC+TGG + chr3_1:92007264-92007283 None:intergenic 50.0%
GCACCTGCTTTCGATAACTC+CGG - chr3_1:92007267-92007286 Msa0387910:three_prime_UTR 50.0%
GATCCGGAGTTATCGAAAGC+AGG + chr3_1:92007273-92007292 None:intergenic 50.0%
TGAGGAGCCTGTTACTCAAG+AGG - chr3_1:92007425-92007444 Msa0387910:CDS 50.0%
TCCTGCTCCTCTTGAGTAAC+AGG + chr3_1:92007435-92007454 None:intergenic 50.0%
CAAGAGGAGCAGGAGAATAC+AGG - chr3_1:92007441-92007460 Msa0387910:CDS 50.0%
TGCTTACGAGGATATTCCGG+TGG - chr3_1:92007476-92007495 Msa0387910:CDS 50.0%
TGGTGGAAATGTTCCTCCAC+CGG - chr3_1:92007506-92007525 Msa0387910:CDS 50.0%
!! GCAAAAGTATTCACCGGTGG+AGG + chr3_1:92007522-92007541 None:intergenic 50.0%
!! TGCTGAGATTGATTTGGGCG+AGG - chr3_1:92007539-92007558 Msa0387910:CDS 50.0%
GCAATTCCGATTTCCCTTGC+TGG - chr3_1:92007621-92007640 Msa0387910:CDS 50.0%
TTCCGATTTCCCTTGCTGGA+AGG - chr3_1:92007625-92007644 Msa0387910:CDS 50.0%
TCCGATTTCCCTTGCTGGAA+GGG - chr3_1:92007626-92007645 Msa0387910:CDS 50.0%
TCCCTTCCAGCAAGGGAAAT+CGG + chr3_1:92007630-92007649 None:intergenic 50.0%
CCATCAAATCCCTTCCAGCA+AGG + chr3_1:92007638-92007657 None:intergenic 50.0%
CCTTGCTGGAAGGGATTTGA+TGG - chr3_1:92007635-92007654 Msa0387910:CDS 50.0%
! TTTGATGGCTTGTGCGCAGA+CGG - chr3_1:92007650-92007669 Msa0387910:CDS 50.0%
CTCTTGTTCTCTCGCCAACT+AGG - chr3_1:92007778-92007797 Msa0387910:CDS 50.0%
! TGCATCGATAGCTCCCTAGT+TGG + chr3_1:92007795-92007814 None:intergenic 50.0%
AACTAGGGAGCTATCGATGC+AGG - chr3_1:92007794-92007813 Msa0387910:CDS 50.0%
TGGTGCTCCAATAAACCAGC+AGG - chr3_1:92007991-92008010 Msa0387910:intron 50.0%
AGATGAGGCTGATAGGATGC+TGG - chr3_1:92008684-92008703 Msa0387910:intron 50.0%
GGCTGATAGGATGCTGGATA+TGG - chr3_1:92008690-92008709 Msa0387910:intron 50.0%
GCGGAGAGACAAAGTCTAAC+TGG + chr3_1:92008927-92008946 None:intergenic 50.0%
! CGTCTCGTCTCTGACTTTTG+TGG - chr3_1:92009260-92009279 Msa0387910:intron 50.0%
!! CTGTCTGTCTTAGCTCTGTC+AGG - chr3_1:92009908-92009927 Msa0387910:CDS 50.0%
TGTCAGGTTATGCCAACCTC+TGG - chr3_1:92009924-92009943 Msa0387910:CDS 50.0%
TATGTGCAACTGCCAGAGGT+TGG + chr3_1:92009939-92009958 None:intergenic 50.0%
TCATGGTGACAGGTCACAAC+AGG - chr3_1:92010188-92010207 Msa0387910:intron 50.0%
GCAATGCTCTTGGAAAGCAG+TGG - chr3_1:92010332-92010351 Msa0387910:intron 50.0%
GGGTCAGCATGACAATATGC+AGG - chr3_1:92010935-92010954 Msa0387910:intron 50.0%
TCCCCCAGAACTCTTGTCTA+TGG - chr3_1:92011293-92011312 Msa0387910:intron 50.0%
! TGCAGGCATTGCCAAGTATG+AGG + chr3_1:92011455-92011474 None:intergenic 50.0%
TCATACTTGGCAATGCCTGC+AGG - chr3_1:92011454-92011473 Msa0387910:intron 50.0%
AAGTGGCAACACCCCCATAT+TGG - chr3_1:92011505-92011524 Msa0387910:intron 50.0%
GTACACCGTATTGGAAGGAC+AGG - chr3_1:92011617-92011636 Msa0387910:CDS 50.0%
CTCTCCCTGTCCTTCCAATA+CGG + chr3_1:92011625-92011644 None:intergenic 50.0%
ACAGGGAGAGCAGGAAAGAA+AGG - chr3_1:92011635-92011654 Msa0387910:CDS 50.0%
TTCGCTGCACGTTCATCCTT+TGG - chr3_1:92011761-92011780 Msa0387910:CDS 50.0%
GAAAGTCACGGCCACCAAAT+CGG + chr3_1:92011817-92011836 None:intergenic 50.0%
!! AGGGGTGGTTCTGATTACCA+TGG - chr3_1:92011857-92011876 Msa0387910:CDS 50.0%
! GGTTCTGATTACCATGGTGC+AGG - chr3_1:92011863-92011882 Msa0387910:CDS 50.0%
!! GGAAATAGCGGTGGTGGATA+TGG - chr3_1:92011884-92011903 Msa0387910:CDS 50.0%
! TATGGTGGAGGATATGGTGG+TGG - chr3_1:92011920-92011939 Msa0387910:CDS 50.0%
! ATGGTGGAGGATATGGTGGT+GGG - chr3_1:92011921-92011940 Msa0387910:CDS 50.0%
CTAATCGCCAAGGGACATGT+GGG - chr3_1:92012164-92012183 Msa0387910:CDS 50.0%
ATACACACCCACATGTCCCT+TGG + chr3_1:92012174-92012193 None:intergenic 50.0%
!! GTGTTAGCAGGTGTTGGCAA+TGG - chr3_1:92012228-92012247 Msa0387910:CDS 50.0%
! ATGTGGTGAGGGGTTGATTG+AGG - chr3_1:92012338-92012357 Msa0387910:intron 50.0%
!! TGGCGGTGTTGGTGCATTCT+CGG + chr3_1:92007142-92007161 None:intergenic 55.0%
ACAGAAGCAGCAGCAGAAGG+TGG + chr3_1:92007162-92007181 None:intergenic 55.0%
TCGATAACTCCGGATCGCGT+TGG - chr3_1:92007277-92007296 Msa0387910:three_prime_UTR 55.0%
CGATAACTCCGGATCGCGTT+GGG - chr3_1:92007278-92007297 Msa0387910:three_prime_UTR 55.0%
!! GTGGTCGTGGTGGTGGTTAT+GGG - chr3_1:92007337-92007356 Msa0387910:three_prime_UTR 55.0%
! GGTGGTGGTTATGGGAACAG+AGG - chr3_1:92007345-92007364 Msa0387910:exon 55.0%
GGTGGTTATGGGAACAGAGG+TGG - chr3_1:92007348-92007367 Msa0387910:exon 55.0%
GGTTATGGGAACAGAGGTGG+TGG - chr3_1:92007351-92007370 Msa0387910:exon 55.0%
! TATGGGAACAGAGGTGGTGG+TGG - chr3_1:92007354-92007373 Msa0387910:exon 55.0%
GCCTGTTACTCAAGAGGAGC+AGG - chr3_1:92007431-92007450 Msa0387910:CDS 55.0%
GATATTCCGGTGGAGACGAG+TGG - chr3_1:92007486-92007505 Msa0387910:CDS 55.0%
TTTCCACCACTCGTCTCCAC+CGG + chr3_1:92007495-92007514 None:intergenic 55.0%
TGAAGCCGACACCTGTTCAG+CGG - chr3_1:92007595-92007614 Msa0387910:CDS 55.0%
GGAATTGCATGCCGCTGAAC+AGG + chr3_1:92007609-92007628 None:intergenic 55.0%
! TTGATGGCTTGTGCGCAGAC+GGG - chr3_1:92007651-92007670 Msa0387910:CDS 55.0%
GGCGAGAGAACAAGAGCAAG+CGG + chr3_1:92007774-92007793 None:intergenic 55.0%
ATACCAGACAGGGGTTAGGG+TGG - chr3_1:92007955-92007974 Msa0387910:intron 55.0%
! AGGGTGGTTGTTGCTTACGG+TGG - chr3_1:92007971-92007990 Msa0387910:intron 55.0%
CAGCTACGAGAGCTTGAGAG+AGG - chr3_1:92008571-92008590 Msa0387910:intron 55.0%
ACGAGAGCTTGAGAGAGGAG+TGG - chr3_1:92008576-92008595 Msa0387910:intron 55.0%
TGTTGCAACTCCAGGAAGGC+TGG - chr3_1:92008606-92008625 Msa0387910:intron 55.0%
CAAATGGACATGCCTCCAGC+AGG - chr3_1:92008745-92008764 Msa0387910:intron 55.0%
GTTTGTCTGACACCTGCTGG+AGG + chr3_1:92008760-92008779 None:intergenic 55.0%
CACGCGCGCGATAAGAAAAC+AGG + chr3_1:92009999-92010018 None:intergenic 55.0%
AAAGAAGGGAGCTGATGCGC+TGG - chr3_1:92010125-92010144 Msa0387910:intron 55.0%
GCAATGCCTGCAGGAAAGAG+AGG - chr3_1:92011463-92011482 Msa0387910:intron 55.0%
ATGCTGCCTCTCTTTCCTGC+AGG + chr3_1:92011472-92011491 None:intergenic 55.0%
ATTGGAAGGACAGGGAGAGC+AGG - chr3_1:92011626-92011645 Msa0387910:CDS 55.0%
! AAGTACCTGCTTGGCTCTCG+CGG - chr3_1:92011738-92011757 Msa0387910:CDS 55.0%
CAAATCGGCCTCCACCTGAA+CGG + chr3_1:92011802-92011821 None:intergenic 55.0%
GGCCGTGACTTTCGAAGAGA+AGG - chr3_1:92011824-92011843 Msa0387910:CDS 55.0%
! CACCGCTATTTCCTGCACCA+TGG + chr3_1:92011877-92011896 None:intergenic 55.0%
CATGGTGCAGGAAATAGCGG+TGG - chr3_1:92011875-92011894 Msa0387910:CDS 55.0%
GTGGATATGGGGCTTCTGGT+GGG - chr3_1:92011897-92011916 Msa0387910:CDS 55.0%
! TATGGGGCTTCTGGTGGGTA+TGG - chr3_1:92011902-92011921 Msa0387910:CDS 55.0%
! GGTGGGTATGGTGGAGGATA+TGG - chr3_1:92011914-92011933 Msa0387910:CDS 55.0%
! GGGTATGGTGGAGGATATGG+TGG - chr3_1:92011917-92011936 Msa0387910:CDS 55.0%
!! GGATATGGTGGTGGGTATGC+TGG - chr3_1:92011929-92011948 Msa0387910:CDS 55.0%
GGGTATGCTGGAAATAGCGC+CGG - chr3_1:92011941-92011960 Msa0387910:CDS 55.0%
GCTAATCGCCAAGGGACATG+TGG - chr3_1:92012163-92012182 Msa0387910:CDS 55.0%
GGGACATGTGGGTGTGTATG+TGG - chr3_1:92012175-92012194 Msa0387910:CDS 55.0%
TGTTGGTGCATTCTCGGCCG+CGG + chr3_1:92007136-92007155 None:intergenic 60.0%
GAAGCAGCAGCAGAAGGTGG+CGG + chr3_1:92007159-92007178 None:intergenic 60.0%
CCACGGTTCCTCAGATGAGG+AGG + chr3_1:92007219-92007238 None:intergenic 60.0%
CCTCCTCATCTGAGGAACCG+TGG - chr3_1:92007216-92007235 Msa0387910:three_prime_UTR 60.0%
GGTCCACGGTTCCTCAGATG+AGG + chr3_1:92007222-92007241 None:intergenic 60.0%
! GTGCTGGTGCTGAAGGTCCA+CGG + chr3_1:92007236-92007255 None:intergenic 60.0%
!! AAAGCAGGTGCTGCTGGTGC+AGG + chr3_1:92007258-92007277 None:intergenic 60.0%
CGGTAATCGTTCCTAGGCGG+AGG + chr3_1:92007306-92007325 None:intergenic 60.0%
CCGCGGTAATCGTTCCTAGG+CGG + chr3_1:92007309-92007328 None:intergenic 60.0%
CCGCCTAGGAACGATTACCG+CGG - chr3_1:92007306-92007325 Msa0387910:three_prime_UTR 60.0%
CCACCGCGGTAATCGTTCCT+AGG + chr3_1:92007312-92007331 None:intergenic 60.0%
CCTAGGAACGATTACCGCGG+TGG - chr3_1:92007309-92007328 Msa0387910:three_prime_UTR 60.0%
AGGAACGATTACCGCGGTGG+TGG - chr3_1:92007312-92007331 Msa0387910:three_prime_UTR 60.0%
! AACGATTACCGCGGTGGTGG+TGG - chr3_1:92007315-92007334 Msa0387910:three_prime_UTR 60.0%
!! GGTGGTCGTGGTGGTGGTTA+TGG - chr3_1:92007336-92007355 Msa0387910:three_prime_UTR 60.0%
!! ACAGAGGTGGTGGTGGTGGT+TGG - chr3_1:92007361-92007380 Msa0387910:exon 60.0%
!! CAGAGGTGGTGGTGGTGGTT+GGG - chr3_1:92007362-92007381 Msa0387910:CDS 60.0%
ATTCCGGTGGAGACGAGTGG+TGG - chr3_1:92007489-92007508 Msa0387910:CDS 60.0%
GCATGCCGCTGAACAGGTGT+CGG + chr3_1:92007603-92007622 None:intergenic 60.0%
CAACCACCCTAACCCCTGTC+TGG + chr3_1:92007961-92007980 None:intergenic 60.0%
GAGCTGATGCGCTGGAACAC+TGG - chr3_1:92010133-92010152 Msa0387910:intron 60.0%
GCTACTGATGTGGCTGCACG+TGG - chr3_1:92011530-92011549 Msa0387910:intron 60.0%
GGAAAGAACCGCCGTTCAGG+TGG - chr3_1:92011788-92011807 Msa0387910:CDS 60.0%
AAGAACCGCCGTTCAGGTGG+AGG - chr3_1:92011791-92011810 Msa0387910:CDS 60.0%
CGTTCAGGTGGAGGCCGATT+TGG - chr3_1:92011800-92011819 Msa0387910:CDS 60.0%
!! TCAGGTGGAGGCCGATTTGG+TGG - chr3_1:92011803-92011822 Msa0387910:CDS 60.0%
GGTGCAGGAAATAGCGGTGG+TGG - chr3_1:92011878-92011897 Msa0387910:CDS 60.0%
!! GGTGGTGGATATGGGGCTTC+TGG - chr3_1:92011893-92011912 Msa0387910:CDS 60.0%
GGTGGATATGGGGCTTCTGG+TGG - chr3_1:92011896-92011915 Msa0387910:CDS 60.0%
! GCTTCTGGTGGGTATGGTGG+AGG - chr3_1:92011908-92011927 Msa0387910:CDS 60.0%
!! CTGGAAATAGCGCCGGTCCT+GGG - chr3_1:92011948-92011967 Msa0387910:CDS 60.0%
!! TGGAAATAGCGCCGGTCCTG+GGG - chr3_1:92011949-92011968 Msa0387910:CDS 60.0%
TCCTGGGGTGACCAGTGCAT+GGG - chr3_1:92011964-92011983 Msa0387910:CDS 60.0%
! GCAGCAGAAGGTGGCGGTGT+TGG + chr3_1:92007153-92007172 None:intergenic 65.0%
!! GGTGCAGGTGCTGGTGCTGA+AGG + chr3_1:92007243-92007262 None:intergenic 65.0%
!! GATTACCGCGGTGGTGGTGG+TGG - chr3_1:92007318-92007337 Msa0387910:three_prime_UTR 65.0%
!! GGGAACAGAGGTGGTGGTGG+TGG - chr3_1:92007357-92007376 Msa0387910:exon 65.0%
! GCTTGTGCGCAGACGGGTTC+AGG - chr3_1:92007657-92007676 Msa0387910:CDS 65.0%
TGACGGGACAGCCTGCACAG+AGG - chr3_1:92007721-92007740 Msa0387910:CDS 65.0%
ACAGTACGCACCCCACGAGG+CGG + chr3_1:92007747-92007766 None:intergenic 65.0%
CACACAGTACGCACCCCACG+AGG + chr3_1:92007750-92007769 None:intergenic 65.0%
ATCGGCCTCCACCTGAACGG+CGG + chr3_1:92011799-92011818 None:intergenic 65.0%
! GGGGCTTCTGGTGGGTATGG+TGG - chr3_1:92011905-92011924 Msa0387910:CDS 65.0%
!! GCTGGAAATAGCGCCGGTCC+TGG - chr3_1:92011947-92011966 Msa0387910:CDS 65.0%
! TGCACTGGTCACCCCAGGAC+CGG + chr3_1:92011963-92011982 None:intergenic 65.0%
GTCCTGGGGTGACCAGTGCA+TGG - chr3_1:92011963-92011982 Msa0387910:CDS 65.0%
! TCCCATGCACTGGTCACCCC+AGG + chr3_1:92011968-92011987 None:intergenic 65.0%
! GAAGGCGCACCCTGAGCCTG+AGG - chr3_1:92006793-92006812 Msa0387910:three_prime_UTR 70.0%
!! GGTGCTGCTGGTGCAGGTGC+TGG + chr3_1:92007252-92007271 None:intergenic 70.0%
!! CGGAGGTGCCCAACGCGATC+CGG + chr3_1:92007289-92007308 None:intergenic 70.0%
CACGACCACCACCACCACCG+CGG + chr3_1:92007326-92007345 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTCGTGG+TGG - chr3_1:92007327-92007346 Msa0387910:three_prime_UTR 70.0%
!! GGTGGTGGTGGTCGTGGTGG+TGG - chr3_1:92007330-92007349 Msa0387910:three_prime_UTR 70.0%
CTGCACAGAGGCCGCCTCGT+GGG - chr3_1:92007733-92007752 Msa0387910:CDS 70.0%
TGCACAGAGGCCGCCTCGTG+GGG - chr3_1:92007734-92007753 Msa0387910:CDS 70.0%
GCGAACCGCGAGAGCCAAGC+AGG + chr3_1:92011746-92011765 None:intergenic 70.0%
CGCGTTGGGCACCTCCGCCT+AGG - chr3_1:92007292-92007311 Msa0387910:three_prime_UTR 75.0%
!! CGCGGTGGTGGTGGTGGTCG+TGG - chr3_1:92007324-92007343 Msa0387910:three_prime_UTR 75.0%
CCACGAGGCGGCCTCTGTGC+AGG + chr3_1:92007735-92007754 None:intergenic 75.0%
CCTGCACAGAGGCCGCCTCG+TGG - chr3_1:92007732-92007751 Msa0387910:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 92006787 92012566 92006787 ID=Msa0387910;Name=Msa0387910
chr3_1 mRNA 92006787 92012566 92006787 ID=Msa0387910-mRNA-1;Parent=Msa0387910;Name=Msa0387910-mRNA-1;_AED=0.28;_eAED=0.28;_QI=180|1|1|1|0.83|0.71|7|575|613
chr3_1 exon 92006787 92007877 92006787 ID=Msa0387910-mRNA-1:exon:25843;Parent=Msa0387910-mRNA-1
chr3_1 exon 92009144 92009257 92009144 ID=Msa0387910-mRNA-1:exon:25842;Parent=Msa0387910-mRNA-1
chr3_1 exon 92009882 92010049 92009882 ID=Msa0387910-mRNA-1:exon:25841;Parent=Msa0387910-mRNA-1
chr3_1 exon 92010537 92010779 92010537 ID=Msa0387910-mRNA-1:exon:25840;Parent=Msa0387910-mRNA-1
chr3_1 exon 92011341 92011424 92011341 ID=Msa0387910-mRNA-1:exon:25839;Parent=Msa0387910-mRNA-1
chr3_1 exon 92011538 92012265 92011538 ID=Msa0387910-mRNA-1:exon:25838;Parent=Msa0387910-mRNA-1
chr3_1 exon 92012398 92012566 92012398 ID=Msa0387910-mRNA-1:exon:25837;Parent=Msa0387910-mRNA-1
chr3_1 five_prime_UTR 92012398 92012566 92012398 ID=Msa0387910-mRNA-1:five_prime_utr;Parent=Msa0387910-mRNA-1
chr3_1 five_prime_UTR 92012255 92012265 92012255 ID=Msa0387910-mRNA-1:five_prime_utr;Parent=Msa0387910-mRNA-1
chr3_1 CDS 92011538 92012254 92011538 ID=Msa0387910-mRNA-1:cds;Parent=Msa0387910-mRNA-1
chr3_1 CDS 92011341 92011424 92011341 ID=Msa0387910-mRNA-1:cds;Parent=Msa0387910-mRNA-1
chr3_1 CDS 92010537 92010779 92010537 ID=Msa0387910-mRNA-1:cds;Parent=Msa0387910-mRNA-1
chr3_1 CDS 92009882 92010049 92009882 ID=Msa0387910-mRNA-1:cds;Parent=Msa0387910-mRNA-1
chr3_1 CDS 92009144 92009257 92009144 ID=Msa0387910-mRNA-1:cds;Parent=Msa0387910-mRNA-1
chr3_1 CDS 92007362 92007877 92007362 ID=Msa0387910-mRNA-1:cds;Parent=Msa0387910-mRNA-1
chr3_1 three_prime_UTR 92006787 92007361 92006787 ID=Msa0387910-mRNA-1:three_prime_utr;Parent=Msa0387910-mRNA-1
Gene Sequence

>Msa0387910

ATGCGATCTTCATGGGCTGATTTGGCTGCAAATTCCGCGGCCGAGAATGCACCAACACCGCCACCTTCTGCTGCTGCTTCTGTTAACAATGCTGCCAACACTCGACCTGTTTACGTTCCTCCTCATCTGAGGAACCGTGGACCTTCAGCACCAGCACCTGCACCAGCAGCACCTGCTTTCGATAACTCCGGATCGCGTTGGGCACCTCCGCCTAGGAACGATTACCGCGGTGGTGGTGGTGGTCGTGGTGGTGGTTATGGGAACAGAGGTGGTGGTGGTGGTTGGGATCGTCGTGAAGCAAATCCATTTGCAGATCAGGATGATTCTGAGGAGCCTGTTACTCAAGAGGAGCAGGAGAATACAGGGATAAACTTTGATGCTTACGAGGATATTCCGGTGGAGACGAGTGGTGGAAATGTTCCTCCACCGGTGAATACTTTTGCTGAGATTGATTTGGGCGAGGCGCTTAATCAGAATATTAGGCGATGTAAGTACGTGAAGCCGACACCTGTTCAGCGGCATGCAATTCCGATTTCCCTTGCTGGAAGGGATTTGATGGCTTGTGCGCAGACGGGTTCAGGAAAGACTGCTGCGTTTTGTTTTCCAATAATCAGTGGAATTATGACGGGACAGCCTGCACAGAGGCCGCCTCGTGGGGTGCGTACTGTGTGTCCGCTTGCTCTTGTTCTCTCGCCAACTAGGGAGCTATCGATGCAGATACACGAAGAGGCTAGGAAGTTTTCATACCAGACAGGGGTTAGGGTGGTTGTTGCTTACGGTGGTGCTCCAATAAACCAGCAGCTACGAGAGCTTGAGAGAGGAGTGGACATTCTTGTTGCAACTCCAGGAAGGCTGGTTGATTTGTTGGAAAGAGCCAGAGTTTCACTGTCGATGATTAGGTATCTAGCCTTAGATGAGGCTGATAGGATGCTGGATATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAACAAATGGACATGCCTCCAGCAGGTGTCAGACAAACTATGTTGTTCAGTGCCACTTTTCCAAAAGAGATACAGAGACTAGCCTCTGATTTCCTTTCAAATTATATTTTTCTGGCTGTTGGAAGAGTGGGATCAAGTACCGATTTAATTGACCAAAGAGTTGAGTACGTTCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCTTCTTCATGCACAAAGAGCAAATGGCGTACAAGGAAAGCAAGCTTTGACTTTAGTCTTTGTGGAGACAAAGAAGGGAGCTGATGCGCTGGAACACTGGTTGTGTCTTAATAATTTCCCAGCAACTACTATTCATGGTGACAGGTCACAACAGGAAAGAGAGGCAGCATTAAGATCATTTAAAAGTGGCAACACCCCCATATTGGTTGCTACTGATGTGGCTGCACGTGGTCTTGACATACCACATGTTGCACATGTAGTTAACTTTGATCTTCCCAATGACATTGATGATTATGTACACCGTATTGGAAGGACAGGGAGAGCAGGAAAGAAAGGTCTTGCAACAGCGTTCTTTAATGAAAACAACACATCTATGGCAAGATCTCTACAAGATTTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTCTCGCGGTTCGCTGCACGTTCATCCTTTGGTGGAGGAAAGAACCGCCGTTCAGGTGGAGGCCGATTTGGTGGCCGTGACTTTCGAAGAGAAGGTTCTTTTAGTAGGGGTGGTTCTGATTACCATGGTGCAGGAAATAGCGGTGGTGGATATGGGGCTTCTGGTGGGTATGGTGGAGGATATGGTGGTGGGTATGCTGGAAATAGCGCCGGTCCTGGGGTGACCAGTGCATGGGACTGA
Protein sequence

>Msa0387910

MRSSWADLAANSAAENAPTPPPSAAASVNNAANTRPVYVPPHLRNRGPSAPAPAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGGYGNRGGGGGWDRREANPFADQDDSEEPVTQEEQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSRFAARSSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGYGGGYAGNSAGPGVTSAWD*