Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337440 | XP_003610142.1 | 96.113 | 283 | 11 | 0 | 1 | 283 | 1 | 283 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337440 | sp|Q38910|XTH23_ARATH | 74.558 | 283 | 69 | 2 | 1 | 280 | 1 | 283 | 1.99e-158 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337440 | G7JVI0 | 96.113 | 283 | 11 | 0 | 1 | 283 | 1 | 283 | 0.0 | 566 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1337440 | Msa1350700 | 0.839844 | 1.242284e-57 | -8.615850e-47 |
| Msa1337440 | Msa1360260 | 0.850785 | 1.356112e-60 | -8.615850e-47 |
| Msa0441600 | Msa1337440 | 0.822203 | 2.685429e-53 | -8.615850e-47 |
| Msa0266220 | Msa1337440 | 0.842015 | 3.347076e-58 | -8.615850e-47 |
| Msa0287680 | Msa1337440 | 0.822682 | 2.078540e-53 | -8.615850e-47 |
| Msa0351780 | Msa1337440 | 0.802302 | 5.982957e-49 | -8.615850e-47 |
| Msa1221280 | Msa1337440 | 0.894309 | 2.783468e-75 | -8.615850e-47 |
| Msa0489120 | Msa1337440 | 0.801254 | 9.817698e-49 | -8.615850e-47 |
| Msa0581360 | Msa1337440 | 0.844860 | 5.817877e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337440 | MtrunA17_Chr4g0072611 | 96.113 | 283 | 11 | 0 | 1 | 283 | 1 | 283 | 0.0 | 566 |
| Msa1337440 | MtrunA17_Chr7g0258911 | 92.580 | 283 | 20 | 1 | 1 | 283 | 1 | 282 | 0.0 | 520 |
| Msa1337440 | MtrunA17_Chr4g0072671 | 85.171 | 263 | 35 | 2 | 22 | 280 | 23 | 285 | 4.92e-165 | 459 |
| Msa1337440 | MtrunA17_Chr4g0072601 | 74.021 | 281 | 69 | 1 | 4 | 280 | 3 | 283 | 3.04e-157 | 439 |
| Msa1337440 | MtrunA17_Chr4g0071341 | 75.185 | 270 | 66 | 1 | 14 | 282 | 14 | 283 | 6.99e-149 | 418 |
| Msa1337440 | MtrunA17_Chr2g0299061 | 71.119 | 277 | 75 | 1 | 9 | 280 | 10 | 286 | 2.21e-146 | 412 |
| Msa1337440 | MtrunA17_Chr3g0122021 | 71.174 | 281 | 74 | 2 | 1 | 281 | 5 | 278 | 1.76e-144 | 407 |
| Msa1337440 | MtrunA17_Chr3g0122031 | 71.174 | 281 | 74 | 2 | 1 | 281 | 5 | 278 | 1.95e-144 | 407 |
| Msa1337440 | MtrunA17_Chr8g0377841 | 72.059 | 272 | 71 | 1 | 9 | 280 | 15 | 281 | 2.51e-144 | 406 |
| Msa1337440 | MtrunA17_Chr4g0072681 | 74.486 | 243 | 54 | 2 | 46 | 280 | 1 | 243 | 2.16e-130 | 370 |
| Msa1337440 | MtrunA17_Chr8g0389641 | 64.945 | 271 | 52 | 2 | 11 | 281 | 16 | 243 | 5.07e-125 | 356 |
| Msa1337440 | MtrunA17_Chr5g0443391 | 55.311 | 273 | 117 | 1 | 9 | 281 | 12 | 279 | 4.48e-107 | 312 |
| Msa1337440 | MtrunA17_Chr6g0486581 | 52.330 | 279 | 126 | 3 | 6 | 280 | 8 | 283 | 1.15e-104 | 306 |
| Msa1337440 | MtrunA17_Chr6g0461731 | 54.255 | 282 | 115 | 4 | 10 | 280 | 32 | 310 | 6.24e-104 | 305 |
| Msa1337440 | MtrunA17_Chr6g0461761 | 54.610 | 282 | 114 | 4 | 10 | 280 | 9 | 287 | 2.52e-103 | 303 |
| Msa1337440 | MtrunA17_Chr7g0252621 | 52.595 | 289 | 123 | 4 | 4 | 281 | 3 | 288 | 9.34e-102 | 299 |
| Msa1337440 | MtrunA17_Chr7g0252601 | 51.546 | 291 | 128 | 4 | 1 | 281 | 1 | 288 | 1.94e-101 | 298 |
| Msa1337440 | MtrunA17_Chr7g0252631 | 56.154 | 260 | 108 | 3 | 25 | 281 | 32 | 288 | 2.09e-101 | 298 |
| Msa1337440 | MtrunA17_Chr3g0096651 | 54.023 | 261 | 115 | 2 | 22 | 281 | 27 | 283 | 3.53e-100 | 295 |
| Msa1337440 | MtrunA17_Chr4g0023961 | 50.000 | 284 | 130 | 4 | 6 | 280 | 8 | 288 | 6.16e-99 | 291 |
| Msa1337440 | MtrunA17_Chr2g0323161 | 51.095 | 274 | 120 | 5 | 17 | 280 | 17 | 286 | 3.26e-98 | 290 |
| Msa1337440 | MtrunA17_Chr4g0054451 | 49.643 | 280 | 132 | 6 | 6 | 280 | 14 | 289 | 2.13e-97 | 288 |
| Msa1337440 | MtrunA17_Chr4g0054431 | 50.179 | 279 | 130 | 6 | 6 | 280 | 14 | 287 | 4.67e-97 | 287 |
| Msa1337440 | MtrunA17_Chr1g0206681 | 49.815 | 271 | 132 | 3 | 15 | 282 | 24 | 293 | 7.57e-94 | 279 |
| Msa1337440 | MtrunA17_Chr1g0206081 | 48.399 | 281 | 133 | 5 | 11 | 283 | 21 | 297 | 1.45e-88 | 265 |
| Msa1337440 | MtrunA17_Chr8g0390201 | 54.545 | 198 | 86 | 1 | 90 | 283 | 15 | 212 | 1.53e-77 | 234 |
| Msa1337440 | MtrunA17_Chr8g0340001 | 46.414 | 237 | 116 | 5 | 49 | 280 | 1 | 231 | 3.21e-69 | 214 |
| Msa1337440 | MtrunA17_Chr4g0028221 | 41.791 | 268 | 139 | 7 | 21 | 280 | 46 | 304 | 4.59e-63 | 201 |
| Msa1337440 | MtrunA17_Chr4g0072641 | 75.397 | 126 | 17 | 2 | 155 | 280 | 37 | 148 | 4.39e-62 | 192 |
| Msa1337440 | MtrunA17_Chr7g0264731 | 41.132 | 265 | 139 | 6 | 24 | 280 | 36 | 291 | 1.43e-61 | 196 |
| Msa1337440 | MtrunA17_Chr2g0327411 | 40.892 | 269 | 143 | 7 | 20 | 280 | 49 | 309 | 1.89e-60 | 194 |
| Msa1337440 | MtrunA17_Chr1g0180451 | 37.124 | 299 | 152 | 7 | 9 | 280 | 5 | 294 | 6.60e-60 | 192 |
| Msa1337440 | MtrunA17_Chr2g0303861 | 39.310 | 290 | 155 | 10 | 1 | 281 | 1 | 278 | 1.23e-59 | 191 |
| Msa1337440 | MtrunA17_Chr2g0303721 | 39.223 | 283 | 150 | 9 | 3 | 277 | 6 | 274 | 3.29e-57 | 184 |
| Msa1337440 | MtrunA17_Chr8g0375981 | 38.346 | 266 | 148 | 7 | 25 | 280 | 31 | 290 | 1.02e-56 | 185 |
| Msa1337440 | MtrunA17_Chr1g0161951 | 40.698 | 258 | 136 | 8 | 33 | 280 | 41 | 291 | 1.55e-55 | 182 |
| Msa1337440 | MtrunA17_Chr7g0235541 | 45.622 | 217 | 104 | 6 | 72 | 282 | 1 | 209 | 2.47e-54 | 175 |
| Msa1337440 | MtrunA17_Chr8g0365231 | 33.663 | 303 | 170 | 7 | 8 | 281 | 11 | 311 | 5.25e-53 | 175 |
| Msa1337440 | MtrunA17_Chr5g0410621 | 36.260 | 262 | 151 | 10 | 33 | 282 | 50 | 307 | 1.04e-47 | 162 |
| Msa1337440 | MtrunA17_Chr8g0382041 | 35.036 | 274 | 147 | 10 | 25 | 280 | 34 | 294 | 2.75e-43 | 150 |
| Msa1337440 | MtrunA17_Chr4g0072631 | 76.190 | 63 | 15 | 0 | 10 | 72 | 16 | 78 | 3.61e-28 | 104 |
| Msa1337440 | MtrunA17_Chr8g0374231 | 44.444 | 108 | 51 | 4 | 181 | 283 | 1 | 104 | 8.91e-24 | 92.8 |
| Msa1337440 | MtrunA17_Chr8g0390181 | 47.826 | 92 | 43 | 2 | 1 | 92 | 7 | 93 | 1.24e-17 | 76.3 |
| Msa1337440 | MtrunA17_Chr8g0350711 | 32.184 | 174 | 110 | 4 | 47 | 218 | 54 | 221 | 1.08e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337440 | AT4G25810.1 | 74.558 | 283 | 69 | 2 | 1 | 280 | 1 | 283 | 2.03e-159 | 445 |
| Msa1337440 | AT5G57560.1 | 71.685 | 279 | 74 | 3 | 7 | 280 | 3 | 281 | 2.42e-152 | 427 |
| Msa1337440 | AT5G57550.1 | 70.251 | 279 | 80 | 1 | 3 | 281 | 8 | 283 | 8.23e-151 | 423 |
| Msa1337440 | AT4G30270.1 | 69.565 | 276 | 66 | 2 | 9 | 280 | 4 | 265 | 2.94e-146 | 411 |
| Msa1337440 | AT3G23730.1 | 66.431 | 283 | 91 | 1 | 3 | 281 | 5 | 287 | 3.10e-141 | 399 |
| Msa1337440 | AT4G14130.1 | 69.485 | 272 | 82 | 1 | 11 | 281 | 14 | 285 | 2.88e-140 | 397 |
| Msa1337440 | AT5G57530.1 | 68.061 | 263 | 84 | 0 | 20 | 282 | 22 | 284 | 3.79e-137 | 389 |
| Msa1337440 | AT5G48070.1 | 64.493 | 276 | 91 | 3 | 8 | 280 | 10 | 281 | 1.10e-136 | 387 |
| Msa1337440 | AT5G57540.1 | 67.050 | 261 | 86 | 0 | 22 | 282 | 23 | 283 | 1.68e-134 | 382 |
| Msa1337440 | AT4G25820.1 | 67.669 | 266 | 86 | 0 | 17 | 282 | 22 | 287 | 2.59e-134 | 382 |
| Msa1337440 | AT2G18800.1 | 63.732 | 284 | 90 | 4 | 10 | 280 | 13 | 296 | 6.15e-133 | 379 |
| Msa1337440 | AT4G30290.1 | 63.799 | 279 | 94 | 3 | 5 | 280 | 2 | 276 | 1.81e-125 | 358 |
| Msa1337440 | AT4G30280.1 | 63.235 | 272 | 95 | 2 | 10 | 280 | 14 | 281 | 2.36e-124 | 356 |
| Msa1337440 | AT1G65310.2 | 65.769 | 260 | 84 | 2 | 22 | 280 | 48 | 303 | 1.57e-123 | 355 |
| Msa1337440 | AT1G65310.1 | 65.769 | 260 | 84 | 2 | 22 | 280 | 26 | 281 | 2.17e-123 | 353 |
| Msa1337440 | AT5G13870.2 | 53.901 | 282 | 120 | 4 | 7 | 281 | 10 | 288 | 9.50e-103 | 301 |
| Msa1337440 | AT5G13870.1 | 53.901 | 282 | 120 | 4 | 7 | 281 | 10 | 288 | 9.50e-103 | 301 |
| Msa1337440 | AT5G13870.3 | 53.901 | 282 | 120 | 4 | 7 | 281 | 10 | 288 | 9.50e-103 | 301 |
| Msa1337440 | AT2G06850.1 | 51.408 | 284 | 132 | 3 | 1 | 281 | 11 | 291 | 5.85e-97 | 287 |
| Msa1337440 | AT5G65730.1 | 47.203 | 286 | 139 | 6 | 1 | 281 | 13 | 291 | 1.68e-96 | 286 |
| Msa1337440 | AT4G03210.1 | 48.958 | 288 | 134 | 6 | 1 | 281 | 4 | 285 | 3.89e-95 | 282 |
| Msa1337440 | AT4G37800.1 | 47.782 | 293 | 136 | 6 | 1 | 280 | 1 | 289 | 1.75e-94 | 281 |
| Msa1337440 | AT4G28850.1 | 48.399 | 281 | 132 | 4 | 11 | 280 | 9 | 287 | 1.33e-93 | 278 |
| Msa1337440 | AT2G14620.1 | 47.143 | 280 | 144 | 3 | 6 | 282 | 18 | 296 | 2.82e-91 | 273 |
| Msa1337440 | AT2G06850.2 | 56.087 | 230 | 95 | 3 | 55 | 281 | 5 | 231 | 5.12e-90 | 267 |
| Msa1337440 | AT4G03210.2 | 53.527 | 241 | 99 | 5 | 47 | 281 | 24 | 257 | 1.84e-89 | 267 |
| Msa1337440 | AT1G11545.1 | 47.440 | 293 | 137 | 7 | 2 | 283 | 16 | 302 | 4.90e-89 | 267 |
| Msa1337440 | AT4G13090.1 | 46.595 | 279 | 142 | 4 | 8 | 281 | 13 | 289 | 4.97e-83 | 251 |
| Msa1337440 | AT2G14620.2 | 50.435 | 230 | 110 | 3 | 56 | 282 | 18 | 246 | 1.99e-79 | 241 |
| Msa1337440 | AT4G13080.1 | 44.484 | 281 | 147 | 4 | 7 | 281 | 15 | 292 | 1.45e-77 | 238 |
| Msa1337440 | AT2G14620.3 | 51.131 | 221 | 104 | 3 | 65 | 282 | 16 | 235 | 1.54e-77 | 236 |
| Msa1337440 | AT3G25050.1 | 45.174 | 259 | 135 | 4 | 25 | 280 | 35 | 289 | 3.15e-77 | 236 |
| Msa1337440 | AT2G36870.1 | 42.264 | 265 | 136 | 6 | 24 | 280 | 42 | 297 | 4.36e-62 | 198 |
| Msa1337440 | AT3G44990.1 | 42.424 | 264 | 135 | 6 | 25 | 280 | 39 | 293 | 2.91e-61 | 196 |
| Msa1337440 | AT1G14720.1 | 35.052 | 291 | 172 | 8 | 3 | 280 | 4 | 290 | 8.55e-54 | 178 |
| Msa1337440 | AT1G10550.1 | 36.782 | 261 | 146 | 6 | 36 | 280 | 52 | 309 | 2.78e-53 | 176 |
| Msa1337440 | AT1G32170.1 | 38.115 | 244 | 137 | 7 | 47 | 280 | 54 | 293 | 1.28e-52 | 175 |
| Msa1337440 | AT2G01850.1 | 32.990 | 291 | 178 | 8 | 3 | 280 | 4 | 290 | 1.50e-49 | 167 |
| Msa1337440 | AT3G48580.1 | 36.567 | 268 | 146 | 10 | 15 | 280 | 28 | 273 | 3.57e-47 | 159 |
| Msa1337440 | AT4G18990.1 | 34.164 | 281 | 148 | 10 | 31 | 280 | 38 | 312 | 1.35e-43 | 152 |
| Msa1337440 | AT3G48580.3 | 36.404 | 228 | 126 | 8 | 55 | 280 | 4 | 214 | 9.89e-41 | 140 |
| Msa1337440 | AT4G18990.2 | 35.644 | 202 | 106 | 7 | 98 | 280 | 42 | 238 | 3.45e-36 | 130 |
| Msa1337440 | AT2G36870.2 | 45.324 | 139 | 66 | 3 | 24 | 154 | 42 | 178 | 9.29e-32 | 116 |
| Msa1337440 | AT3G48580.2 | 32.432 | 259 | 131 | 11 | 24 | 280 | 37 | 253 | 3.30e-30 | 114 |
Find 68 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATAGACTTTGAATTCT+TGG | 0.224719 | tig0001526:+95156 | Msa1337440:CDS |
| ATGTTCTTGAATTCTCTAAT+TGG | 0.274937 | tig0001526:-95453 | None:intergenic |
| TTCAAATATACTTACATAAT+AGG | 0.274974 | tig0001526:-95015 | None:intergenic |
| AATGCATGCACTGTGTCTTC+TGG | 0.301674 | tig0001526:+95627 | Msa1337440:CDS |
| CTATCTCTTGATAAATCTTC+TGG | 0.331426 | tig0001526:+94900 | Msa1337440:CDS |
| GCCTCTGGAATGCTGATGAT+TGG | 0.373323 | tig0001526:+95529 | Msa1337440:CDS |
| GAGATAGACTTTGAATTCTT+GGG | 0.388826 | tig0001526:+95157 | Msa1337440:CDS |
| TGTGTAAGTGATCATTATAA+AGG | 0.397248 | tig0001526:+95899 | Msa1337440:three_prime_UTR |
| CTTGATAAATCTTCTGGCTC+TGG | 0.399692 | tig0001526:+94906 | Msa1337440:CDS |
| GAGAGCAACAATTCTACCTT+TGG | 0.408360 | tig0001526:+95242 | Msa1337440:CDS |
| ATGCAACTTAAACTTGTTCC+TGG | 0.420276 | tig0001526:+94969 | Msa1337440:CDS |
| CAAGAATGCAGGATGACTTA+GGG | 0.422302 | tig0001526:+95804 | Msa1337440:CDS |
| TCAAGAATGCAGGATGACTT+AGG | 0.428486 | tig0001526:+95803 | Msa1337440:CDS |
| TGAAGCAGTGAAAGGAGCTT+TGG | 0.428854 | tig0001526:-95586 | None:intergenic |
| CACAATCTGATAAGAATGAT+TGG | 0.435316 | tig0001526:+95670 | Msa1337440:CDS |
| GCTCTCTGTCACCTTTGCCT+TGG | 0.439694 | tig0001526:-95225 | None:intergenic |
| ACTGTTGCAATTGCCTCTGC+TGG | 0.462191 | tig0001526:+94801 | Msa1337440:CDS |
| CTTGTTCCTGGCAACTCTGC+TGG | 0.467097 | tig0001526:+94981 | Msa1337440:CDS |
| TGATAACAAAAGATTTCCTC+AGG | 0.471429 | tig0001526:+95773 | Msa1337440:CDS |
| CTAATTCAGCTATCATCAAA+AGG | 0.477234 | tig0001526:+95121 | Msa1337440:intron |
| CCTCTGGAATGCTGATGATT+GGG | 0.479356 | tig0001526:+95530 | Msa1337440:CDS |
| CAAGAGATAGAGTTAGAAGT+TGG | 0.488735 | tig0001526:-94887 | None:intergenic |
| TGAGGATCTATTCTAGCCTC+TGG | 0.495478 | tig0001526:+95514 | Msa1337440:CDS |
| GGCTAAACACATTGGTATGA+AGG | 0.499302 | tig0001526:-95204 | None:intergenic |
| GAGGACTTGTTAAGACAGAT+TGG | 0.501266 | tig0001526:+95562 | Msa1337440:CDS |
| AGGCTAGAATAGATCCTCAT+TGG | 0.509448 | tig0001526:-95510 | None:intergenic |
| TAGAATAGATCCTCATTGGT+TGG | 0.521294 | tig0001526:-95506 | None:intergenic |
| ACATTGGTATGAAGGATGTA+AGG | 0.521423 | tig0001526:-95196 | None:intergenic |
| ATCAAGACTTTGATATAACA+TGG | 0.525397 | tig0001526:+94832 | Msa1337440:CDS |
| ATCTCCTTGTAAGTAGTCAA+TGG | 0.538861 | tig0001526:+94737 | Msa1337440:exon |
| ACAGTGCCAGCAGAGTTGCC+AGG | 0.543526 | tig0001526:-94987 | None:intergenic |
| TTCACACATACTCAATTCTG+TGG | 0.546538 | tig0001526:+95284 | Msa1337440:CDS |
| TACAATTATACAACATGTTG+AGG | 0.546546 | tig0001526:-95846 | None:intergenic |
| AGGGTCTTCCTCAAGAATGC+AGG | 0.547862 | tig0001526:+95793 | Msa1337440:CDS |
| CAAGTCTTGAGAGGCTCAAG+TGG | 0.563861 | tig0001526:+95715 | Msa1337440:CDS |
| TCAAGACTTTGATATAACAT+GGG | 0.567537 | tig0001526:+94833 | Msa1337440:CDS |
| ATCATCAAAAGGAGGTGCAT+GGG | 0.570048 | tig0001526:+95132 | Msa1337440:CDS |
| AGTGCCATTGACTACTTACA+AGG | 0.576524 | tig0001526:-94741 | None:intergenic |
| CATACCAATGTGTTTAGCCA+AGG | 0.579890 | tig0001526:+95208 | Msa1337440:CDS |
| TATCATCAAAAGGAGGTGCA+TGG | 0.582020 | tig0001526:+95131 | Msa1337440:CDS |
| TCTTCTGGAATATCATCTTG+TGG | 0.584435 | tig0001526:+95642 | Msa1337440:CDS |
| TTTGCCTTGGCTAAACACAT+TGG | 0.586080 | tig0001526:-95212 | None:intergenic |
| AATTAGAGAATTCAAGAACA+TGG | 0.587989 | tig0001526:+95455 | Msa1337440:CDS |
| CAAGACTTTGATATAACATG+GGG | 0.592977 | tig0001526:+94834 | Msa1337440:CDS |
| TTTCTGTATGAAGCAGTGAA+AGG | 0.596238 | tig0001526:-95594 | None:intergenic |
| CTGCAGTTGGGTCAAACCAA+AGG | 0.596298 | tig0001526:-95258 | None:intergenic |
| TATACTTACACAATGCGTTG+TGG | 0.602985 | tig0001526:-95310 | None:intergenic |
| ATGTGTGAAAATCTGCAGTT+GGG | 0.606525 | tig0001526:-95270 | None:intergenic |
| ACTTGTAGAATCTAGCTCCT+CGG | 0.610078 | tig0001526:-95697 | None:intergenic |
| TATGTGTGAAAATCTGCAGT+TGG | 0.616665 | tig0001526:-95271 | None:intergenic |
| GATGATTGGGCTACAAGAGG+AGG | 0.618195 | tig0001526:+95543 | Msa1337440:CDS |
| TTCAAGAACATGGAATCAAG+TGG | 0.625602 | tig0001526:+95465 | Msa1337440:CDS |
| GCTGATGATTGGGCTACAAG+AGG | 0.628982 | tig0001526:+95540 | Msa1337440:CDS |
| GAATTCTTGGGAAATTTGAG+TGG | 0.630242 | tig0001526:+95169 | Msa1337440:CDS |
| TAGATTCTACAAGTCTTGAG+AGG | 0.640770 | tig0001526:+95706 | Msa1337440:CDS |
| AAGAATGCAGGATGACTTAG+GGG | 0.644048 | tig0001526:+95805 | Msa1337440:CDS |
| TAAGTCATCCTGCATTCTTG+AGG | 0.647584 | tig0001526:-95801 | None:intergenic |
| CCCAATCATCAGCATTCCAG+AGG | 0.656964 | tig0001526:-95530 | None:intergenic |
| AATGTGTTTAGCCAAGGCAA+AGG | 0.660260 | tig0001526:+95214 | Msa1337440:CDS |
| GGTCGTGCTAAAATACTCAA+CGG | 0.673213 | tig0001526:+94861 | Msa1337440:CDS |
| AAGTCTTGAGAGGCTCAAGT+GGG | 0.675842 | tig0001526:+95716 | Msa1337440:CDS |
| AGACTTTGATATAACATGGG+GGG | 0.676311 | tig0001526:+94836 | Msa1337440:CDS |
| GATAACAAAAGATTTCCTCA+GGG | 0.679415 | tig0001526:+95774 | Msa1337440:CDS |
| ATTCAGCTATCATCAAAAGG+AGG | 0.686014 | tig0001526:+95124 | Msa1337440:intron |
| CATTCTTGAGGAAGACCCTG+AGG | 0.700428 | tig0001526:-95789 | None:intergenic |
| TAAGAATGATTGGTTCTCCG+AGG | 0.717666 | tig0001526:+95680 | Msa1337440:CDS |
| CGTGCTAAAATACTCAACGG+TGG | 0.743251 | tig0001526:+94864 | Msa1337440:CDS |
| AAGACTTTGATATAACATGG+GGG | 0.749171 | tig0001526:+94835 | Msa1337440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAATATACTTACATAAT+AGG | - | tig0001526:95018-95037 | None:intergenic | 15.0% |
| !! | TTCAAATATACTTACATAAT+AGG | - | tig0001526:95018-95037 | None:intergenic | 15.0% |
| !!! | AGCTTTGATAACTAATTTTT+TGG | + | tig0001526:95087-95106 | Msa1337440:intron | 20.0% |
| !!! | AGCTTTGATAACTAATTTTT+TGG | + | tig0001526:95087-95106 | Msa1337440:intron | 20.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | + | tig0001526:94832-94851 | Msa1337440:CDS | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | + | tig0001526:94833-94852 | Msa1337440:CDS | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | + | tig0001526:94936-94955 | Msa1337440:CDS | 25.0% |
| ! | TAAAAGAACATTACTTGTGT+TGG | + | tig0001526:95373-95392 | Msa1337440:intron | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | - | tig0001526:95456-95475 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | + | tig0001526:95455-95474 | Msa1337440:CDS | 25.0% |
| ! | TACAATTATACAACATGTTG+AGG | - | tig0001526:95849-95868 | None:intergenic | 25.0% |
| ! | TGTGTAAGTGATCATTATAA+AGG | + | tig0001526:95899-95918 | Msa1337440:three_prime_UTR | 25.0% |
| ! | ATCAAGACTTTGATATAACA+TGG | + | tig0001526:94832-94851 | Msa1337440:CDS | 25.0% |
| ! | TCAAGACTTTGATATAACAT+GGG | + | tig0001526:94833-94852 | Msa1337440:CDS | 25.0% |
| !! | TCCAAAAATGAATACCTTTT+TGG | + | tig0001526:94936-94955 | Msa1337440:CDS | 25.0% |
| ! | TAAAAGAACATTACTTGTGT+TGG | + | tig0001526:95373-95392 | Msa1337440:intron | 25.0% |
| ! | ATGTTCTTGAATTCTCTAAT+TGG | - | tig0001526:95456-95475 | None:intergenic | 25.0% |
| ! | AATTAGAGAATTCAAGAACA+TGG | + | tig0001526:95455-95474 | Msa1337440:CDS | 25.0% |
| ! | TACAATTATACAACATGTTG+AGG | - | tig0001526:95849-95868 | None:intergenic | 25.0% |
| ! | TGTGTAAGTGATCATTATAA+AGG | + | tig0001526:95899-95918 | Msa1337440:three_prime_UTR | 25.0% |
| CAAGACTTTGATATAACATG+GGG | + | tig0001526:94834-94853 | Msa1337440:CDS | 30.0% | |
| AAGACTTTGATATAACATGG+GGG | + | tig0001526:94835-94854 | Msa1337440:CDS | 30.0% | |
| CTATCTCTTGATAAATCTTC+TGG | + | tig0001526:94900-94919 | Msa1337440:CDS | 30.0% | |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | - | tig0001526:94940-94959 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | - | tig0001526:94953-94972 | None:intergenic | 30.0% |
| CTAATTCAGCTATCATCAAA+AGG | + | tig0001526:95121-95140 | Msa1337440:intron | 30.0% | |
| TGAGATAGACTTTGAATTCT+TGG | + | tig0001526:95156-95175 | Msa1337440:CDS | 30.0% | |
| GAGATAGACTTTGAATTCTT+GGG | + | tig0001526:95157-95176 | Msa1337440:CDS | 30.0% | |
| !! | TGTATTTTTCAGTTTCTCAG+TGG | + | tig0001526:95422-95441 | Msa1337440:intron | 30.0% |
| CACAATCTGATAAGAATGAT+TGG | + | tig0001526:95670-95689 | Msa1337440:CDS | 30.0% | |
| TGATAACAAAAGATTTCCTC+AGG | + | tig0001526:95773-95792 | Msa1337440:CDS | 30.0% | |
| GATAACAAAAGATTTCCTCA+GGG | + | tig0001526:95774-95793 | Msa1337440:CDS | 30.0% | |
| CAAGACTTTGATATAACATG+GGG | + | tig0001526:94834-94853 | Msa1337440:CDS | 30.0% | |
| AAGACTTTGATATAACATGG+GGG | + | tig0001526:94835-94854 | Msa1337440:CDS | 30.0% | |
| CTATCTCTTGATAAATCTTC+TGG | + | tig0001526:94900-94919 | Msa1337440:CDS | 30.0% | |
| !!! | GCCAAAAAGGTATTCATTTT+TGG | - | tig0001526:94940-94959 | None:intergenic | 30.0% |
| ! | GCATATCAATTTTGCCAAAA+AGG | - | tig0001526:94953-94972 | None:intergenic | 30.0% |
| CTAATTCAGCTATCATCAAA+AGG | + | tig0001526:95121-95140 | Msa1337440:intron | 30.0% | |
| TGAGATAGACTTTGAATTCT+TGG | + | tig0001526:95156-95175 | Msa1337440:CDS | 30.0% | |
| GAGATAGACTTTGAATTCTT+GGG | + | tig0001526:95157-95176 | Msa1337440:CDS | 30.0% | |
| !! | TGTATTTTTCAGTTTCTCAG+TGG | + | tig0001526:95422-95441 | Msa1337440:intron | 30.0% |
| CACAATCTGATAAGAATGAT+TGG | + | tig0001526:95670-95689 | Msa1337440:CDS | 30.0% | |
| TGATAACAAAAGATTTCCTC+AGG | + | tig0001526:95773-95792 | Msa1337440:CDS | 30.0% | |
| GATAACAAAAGATTTCCTCA+GGG | + | tig0001526:95774-95793 | Msa1337440:CDS | 30.0% | |
| ATCTCCTTGTAAGTAGTCAA+TGG | + | tig0001526:94737-94756 | Msa1337440:exon | 35.0% | |
| CAGTCGAAGTAAAAATGACT+AGG | - | tig0001526:94785-94804 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | - | tig0001526:94817-94836 | None:intergenic | 35.0% | |
| AGACTTTGATATAACATGGG+GGG | + | tig0001526:94836-94855 | Msa1337440:CDS | 35.0% | |
| CAAGAGATAGAGTTAGAAGT+TGG | - | tig0001526:94890-94909 | None:intergenic | 35.0% | |
| ! | ATGCAACTTAAACTTGTTCC+TGG | + | tig0001526:94969-94988 | Msa1337440:CDS | 35.0% |
| ATTCAGCTATCATCAAAAGG+AGG | + | tig0001526:95124-95143 | Msa1337440:intron | 35.0% | |
| GAATTCTTGGGAAATTTGAG+TGG | + | tig0001526:95169-95188 | Msa1337440:CDS | 35.0% | |
| ACATTGGTATGAAGGATGTA+AGG | - | tig0001526:95199-95218 | None:intergenic | 35.0% | |
| ATGTGTGAAAATCTGCAGTT+GGG | - | tig0001526:95273-95292 | None:intergenic | 35.0% | |
| TATGTGTGAAAATCTGCAGT+TGG | - | tig0001526:95274-95293 | None:intergenic | 35.0% | |
| TTCACACATACTCAATTCTG+TGG | + | tig0001526:95284-95303 | Msa1337440:CDS | 35.0% | |
| TATACTTACACAATGCGTTG+TGG | - | tig0001526:95313-95332 | None:intergenic | 35.0% | |
| !! | TTTTTCAGTTTCTCAGTGGA+TGG | + | tig0001526:95426-95445 | Msa1337440:intron | 35.0% |
| TTCAAGAACATGGAATCAAG+TGG | + | tig0001526:95465-95484 | Msa1337440:CDS | 35.0% | |
| !!! | ATCCTCATTGGTTGGTTTTT+GGG | - | tig0001526:95501-95520 | None:intergenic | 35.0% |
| TAGAATAGATCCTCATTGGT+TGG | - | tig0001526:95509-95528 | None:intergenic | 35.0% | |
| TTTCTGTATGAAGCAGTGAA+AGG | - | tig0001526:95597-95616 | None:intergenic | 35.0% | |
| !! | TCTTCTGGAATATCATCTTG+TGG | + | tig0001526:95642-95661 | Msa1337440:CDS | 35.0% |
| TAGATTCTACAAGTCTTGAG+AGG | + | tig0001526:95706-95725 | Msa1337440:CDS | 35.0% | |
| ATCTCCTTGTAAGTAGTCAA+TGG | + | tig0001526:94737-94756 | Msa1337440:exon | 35.0% | |
| CAGTCGAAGTAAAAATGACT+AGG | - | tig0001526:94785-94804 | None:intergenic | 35.0% | |
| TTGATAAAAATTGCCAGCAG+AGG | - | tig0001526:94817-94836 | None:intergenic | 35.0% | |
| AGACTTTGATATAACATGGG+GGG | + | tig0001526:94836-94855 | Msa1337440:CDS | 35.0% | |
| CAAGAGATAGAGTTAGAAGT+TGG | - | tig0001526:94890-94909 | None:intergenic | 35.0% | |
| ! | ATGCAACTTAAACTTGTTCC+TGG | + | tig0001526:94969-94988 | Msa1337440:CDS | 35.0% |
| ATTCAGCTATCATCAAAAGG+AGG | + | tig0001526:95124-95143 | Msa1337440:intron | 35.0% | |
| GAATTCTTGGGAAATTTGAG+TGG | + | tig0001526:95169-95188 | Msa1337440:CDS | 35.0% | |
| ACATTGGTATGAAGGATGTA+AGG | - | tig0001526:95199-95218 | None:intergenic | 35.0% | |
| ATGTGTGAAAATCTGCAGTT+GGG | - | tig0001526:95273-95292 | None:intergenic | 35.0% | |
| TATGTGTGAAAATCTGCAGT+TGG | - | tig0001526:95274-95293 | None:intergenic | 35.0% | |
| TTCACACATACTCAATTCTG+TGG | + | tig0001526:95284-95303 | Msa1337440:CDS | 35.0% | |
| TATACTTACACAATGCGTTG+TGG | - | tig0001526:95313-95332 | None:intergenic | 35.0% | |
| !! | TTTTTCAGTTTCTCAGTGGA+TGG | + | tig0001526:95426-95445 | Msa1337440:intron | 35.0% |
| TTCAAGAACATGGAATCAAG+TGG | + | tig0001526:95465-95484 | Msa1337440:CDS | 35.0% | |
| !!! | ATCCTCATTGGTTGGTTTTT+GGG | - | tig0001526:95501-95520 | None:intergenic | 35.0% |
| TAGAATAGATCCTCATTGGT+TGG | - | tig0001526:95509-95528 | None:intergenic | 35.0% | |
| TTTCTGTATGAAGCAGTGAA+AGG | - | tig0001526:95597-95616 | None:intergenic | 35.0% | |
| !! | TCTTCTGGAATATCATCTTG+TGG | + | tig0001526:95642-95661 | Msa1337440:CDS | 35.0% |
| TAGATTCTACAAGTCTTGAG+AGG | + | tig0001526:95706-95725 | Msa1337440:CDS | 35.0% | |
| ! | AGTGCCATTGACTACTTACA+AGG | - | tig0001526:94744-94763 | None:intergenic | 40.0% |
| TTTGATATAACATGGGGGGA+TGG | + | tig0001526:94840-94859 | Msa1337440:CDS | 40.0% | |
| GGTCGTGCTAAAATACTCAA+CGG | + | tig0001526:94861-94880 | Msa1337440:CDS | 40.0% | |
| !! | CTTGATAAATCTTCTGGCTC+TGG | + | tig0001526:94906-94925 | Msa1337440:CDS | 40.0% |
| ! | TATCATCAAAAGGAGGTGCA+TGG | + | tig0001526:95131-95150 | Msa1337440:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | + | tig0001526:95132-95151 | Msa1337440:CDS | 40.0% |
| GGCTAAACACATTGGTATGA+AGG | - | tig0001526:95207-95226 | None:intergenic | 40.0% | |
| CATACCAATGTGTTTAGCCA+AGG | + | tig0001526:95208-95227 | Msa1337440:CDS | 40.0% | |
| TTTGCCTTGGCTAAACACAT+TGG | - | tig0001526:95215-95234 | None:intergenic | 40.0% | |
| AATGTGTTTAGCCAAGGCAA+AGG | + | tig0001526:95214-95233 | Msa1337440:CDS | 40.0% | |
| GAGAGCAACAATTCTACCTT+TGG | + | tig0001526:95242-95261 | Msa1337440:CDS | 40.0% | |
| !!! | ATTGGTTGGTTTTTGGGGAA+TGG | - | tig0001526:95495-95514 | None:intergenic | 40.0% |
| !!! | TCCTCATTGGTTGGTTTTTG+GGG | - | tig0001526:95500-95519 | None:intergenic | 40.0% |
| !!! | GATCCTCATTGGTTGGTTTT+TGG | - | tig0001526:95502-95521 | None:intergenic | 40.0% |
| AGGCTAGAATAGATCCTCAT+TGG | - | tig0001526:95513-95532 | None:intergenic | 40.0% | |
| !! | GAGGACTTGTTAAGACAGAT+TGG | + | tig0001526:95562-95581 | Msa1337440:CDS | 40.0% |
| ! | TAAGAATGATTGGTTCTCCG+AGG | + | tig0001526:95680-95699 | Msa1337440:CDS | 40.0% |
| ! | ACTTGTAGAATCTAGCTCCT+CGG | - | tig0001526:95700-95719 | None:intergenic | 40.0% |
| TAAGTCATCCTGCATTCTTG+AGG | - | tig0001526:95804-95823 | None:intergenic | 40.0% | |
| TCAAGAATGCAGGATGACTT+AGG | + | tig0001526:95803-95822 | Msa1337440:CDS | 40.0% | |
| CAAGAATGCAGGATGACTTA+GGG | + | tig0001526:95804-95823 | Msa1337440:CDS | 40.0% | |
| AAGAATGCAGGATGACTTAG+GGG | + | tig0001526:95805-95824 | Msa1337440:CDS | 40.0% | |
| ! | AGTGCCATTGACTACTTACA+AGG | - | tig0001526:94744-94763 | None:intergenic | 40.0% |
| TTTGATATAACATGGGGGGA+TGG | + | tig0001526:94840-94859 | Msa1337440:CDS | 40.0% | |
| GGTCGTGCTAAAATACTCAA+CGG | + | tig0001526:94861-94880 | Msa1337440:CDS | 40.0% | |
| !! | CTTGATAAATCTTCTGGCTC+TGG | + | tig0001526:94906-94925 | Msa1337440:CDS | 40.0% |
| ! | TATCATCAAAAGGAGGTGCA+TGG | + | tig0001526:95131-95150 | Msa1337440:CDS | 40.0% |
| ! | ATCATCAAAAGGAGGTGCAT+GGG | + | tig0001526:95132-95151 | Msa1337440:CDS | 40.0% |
| GGCTAAACACATTGGTATGA+AGG | - | tig0001526:95207-95226 | None:intergenic | 40.0% | |
| CATACCAATGTGTTTAGCCA+AGG | + | tig0001526:95208-95227 | Msa1337440:CDS | 40.0% | |
| TTTGCCTTGGCTAAACACAT+TGG | - | tig0001526:95215-95234 | None:intergenic | 40.0% | |
| AATGTGTTTAGCCAAGGCAA+AGG | + | tig0001526:95214-95233 | Msa1337440:CDS | 40.0% | |
| GAGAGCAACAATTCTACCTT+TGG | + | tig0001526:95242-95261 | Msa1337440:CDS | 40.0% | |
| !!! | ATTGGTTGGTTTTTGGGGAA+TGG | - | tig0001526:95495-95514 | None:intergenic | 40.0% |
| !!! | TCCTCATTGGTTGGTTTTTG+GGG | - | tig0001526:95500-95519 | None:intergenic | 40.0% |
| !!! | GATCCTCATTGGTTGGTTTT+TGG | - | tig0001526:95502-95521 | None:intergenic | 40.0% |
| AGGCTAGAATAGATCCTCAT+TGG | - | tig0001526:95513-95532 | None:intergenic | 40.0% | |
| !! | GAGGACTTGTTAAGACAGAT+TGG | + | tig0001526:95562-95581 | Msa1337440:CDS | 40.0% |
| ! | TAAGAATGATTGGTTCTCCG+AGG | + | tig0001526:95680-95699 | Msa1337440:CDS | 40.0% |
| ! | ACTTGTAGAATCTAGCTCCT+CGG | - | tig0001526:95700-95719 | None:intergenic | 40.0% |
| TAAGTCATCCTGCATTCTTG+AGG | - | tig0001526:95804-95823 | None:intergenic | 40.0% | |
| TCAAGAATGCAGGATGACTT+AGG | + | tig0001526:95803-95822 | Msa1337440:CDS | 40.0% | |
| CAAGAATGCAGGATGACTTA+GGG | + | tig0001526:95804-95823 | Msa1337440:CDS | 40.0% | |
| AAGAATGCAGGATGACTTAG+GGG | + | tig0001526:95805-95824 | Msa1337440:CDS | 40.0% | |
| CGTGCTAAAATACTCAACGG+TGG | + | tig0001526:94864-94883 | Msa1337440:CDS | 45.0% | |
| TCCCCAAAAACCAACCAATG+AGG | + | tig0001526:95496-95515 | Msa1337440:CDS | 45.0% | |
| TGAGGATCTATTCTAGCCTC+TGG | + | tig0001526:95514-95533 | Msa1337440:CDS | 45.0% | |
| !! | CCTCTGGAATGCTGATGATT+GGG | + | tig0001526:95530-95549 | Msa1337440:CDS | 45.0% |
| TGAAGCAGTGAAAGGAGCTT+TGG | - | tig0001526:95589-95608 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | + | tig0001526:95627-95646 | Msa1337440:CDS | 45.0% | |
| AAGTCTTGAGAGGCTCAAGT+GGG | + | tig0001526:95716-95735 | Msa1337440:CDS | 45.0% | |
| CGTGCTAAAATACTCAACGG+TGG | + | tig0001526:94864-94883 | Msa1337440:CDS | 45.0% | |
| TCCCCAAAAACCAACCAATG+AGG | + | tig0001526:95496-95515 | Msa1337440:CDS | 45.0% | |
| TGAGGATCTATTCTAGCCTC+TGG | + | tig0001526:95514-95533 | Msa1337440:CDS | 45.0% | |
| !! | CCTCTGGAATGCTGATGATT+GGG | + | tig0001526:95530-95549 | Msa1337440:CDS | 45.0% |
| TGAAGCAGTGAAAGGAGCTT+TGG | - | tig0001526:95589-95608 | None:intergenic | 45.0% | |
| AATGCATGCACTGTGTCTTC+TGG | + | tig0001526:95627-95646 | Msa1337440:CDS | 45.0% | |
| AAGTCTTGAGAGGCTCAAGT+GGG | + | tig0001526:95716-95735 | Msa1337440:CDS | 45.0% | |
| ACTGTTGCAATTGCCTCTGC+TGG | + | tig0001526:94801-94820 | Msa1337440:CDS | 50.0% | |
| CTGCAGTTGGGTCAAACCAA+AGG | - | tig0001526:95261-95280 | None:intergenic | 50.0% | |
| !! | GCCTCTGGAATGCTGATGAT+TGG | + | tig0001526:95529-95548 | Msa1337440:CDS | 50.0% |
| CCCAATCATCAGCATTCCAG+AGG | - | tig0001526:95533-95552 | None:intergenic | 50.0% | |
| GCTGATGATTGGGCTACAAG+AGG | + | tig0001526:95540-95559 | Msa1337440:CDS | 50.0% | |
| GATGATTGGGCTACAAGAGG+AGG | + | tig0001526:95543-95562 | Msa1337440:CDS | 50.0% | |
| CAAGTCTTGAGAGGCTCAAG+TGG | + | tig0001526:95715-95734 | Msa1337440:CDS | 50.0% | |
| CATTCTTGAGGAAGACCCTG+AGG | - | tig0001526:95792-95811 | None:intergenic | 50.0% | |
| AGGGTCTTCCTCAAGAATGC+AGG | + | tig0001526:95793-95812 | Msa1337440:CDS | 50.0% | |
| ACTGTTGCAATTGCCTCTGC+TGG | + | tig0001526:94801-94820 | Msa1337440:CDS | 50.0% | |
| CTGCAGTTGGGTCAAACCAA+AGG | - | tig0001526:95261-95280 | None:intergenic | 50.0% | |
| !! | GCCTCTGGAATGCTGATGAT+TGG | + | tig0001526:95529-95548 | Msa1337440:CDS | 50.0% |
| CCCAATCATCAGCATTCCAG+AGG | - | tig0001526:95533-95552 | None:intergenic | 50.0% | |
| GCTGATGATTGGGCTACAAG+AGG | + | tig0001526:95540-95559 | Msa1337440:CDS | 50.0% | |
| GATGATTGGGCTACAAGAGG+AGG | + | tig0001526:95543-95562 | Msa1337440:CDS | 50.0% | |
| CAAGTCTTGAGAGGCTCAAG+TGG | + | tig0001526:95715-95734 | Msa1337440:CDS | 50.0% | |
| CATTCTTGAGGAAGACCCTG+AGG | - | tig0001526:95792-95811 | None:intergenic | 50.0% | |
| AGGGTCTTCCTCAAGAATGC+AGG | + | tig0001526:95793-95812 | Msa1337440:CDS | 50.0% | |
| CTTGTTCCTGGCAACTCTGC+TGG | + | tig0001526:94981-95000 | Msa1337440:CDS | 55.0% | |
| GCTCTCTGTCACCTTTGCCT+TGG | - | tig0001526:95228-95247 | None:intergenic | 55.0% | |
| CTTGTTCCTGGCAACTCTGC+TGG | + | tig0001526:94981-95000 | Msa1337440:CDS | 55.0% | |
| GCTCTCTGTCACCTTTGCCT+TGG | - | tig0001526:95228-95247 | None:intergenic | 55.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | - | tig0001526:94990-95009 | None:intergenic | 60.0% | |
| ACAGTGCCAGCAGAGTTGCC+AGG | - | tig0001526:94990-95009 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0001526 | gene | 94729 | 95930 | 94729 | ID=Msa1337440;Name=Msa1337440 |
| tig0001526 | mRNA | 94729 | 95930 | 94729 | ID=Msa1337440-mRNA-1;Parent=Msa1337440;Name=Msa1337440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=27|1|1|1|1|1|3|106|283 |
| tig0001526 | exon | 94729 | 95022 | 94729 | ID=Msa1337440-mRNA-1:exon:1117;Parent=Msa1337440-mRNA-1 |
| tig0001526 | exon | 95130 | 95323 | 95130 | ID=Msa1337440-mRNA-1:exon:1118;Parent=Msa1337440-mRNA-1 |
| tig0001526 | exon | 95434 | 95930 | 95434 | ID=Msa1337440-mRNA-1:exon:1119;Parent=Msa1337440-mRNA-1 |
| tig0001526 | five_prime_UTR | 94729 | 94755 | 94729 | ID=Msa1337440-mRNA-1:five_prime_utr;Parent=Msa1337440-mRNA-1 |
| tig0001526 | CDS | 94756 | 95022 | 94756 | ID=Msa1337440-mRNA-1:cds;Parent=Msa1337440-mRNA-1 |
| tig0001526 | CDS | 95130 | 95323 | 95130 | ID=Msa1337440-mRNA-1:cds;Parent=Msa1337440-mRNA-1 |
| tig0001526 | CDS | 95434 | 95824 | 95434 | ID=Msa1337440-mRNA-1:cds;Parent=Msa1337440-mRNA-1 |
| tig0001526 | three_prime_UTR | 95825 | 95930 | 95825 | ID=Msa1337440-mRNA-1:three_prime_utr;Parent=Msa1337440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
