AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1350700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1350700 MtrunA17_Chr2g0331481 92.163 638 47 2 1 635 1 638 0.0 1182
Msa1350700 MtrunA17_Chr2g0331471 92.006 638 47 3 1 635 65 701 0.0 1178
Msa1350700 MtrunA17_Chr2g0331461 83.516 637 101 3 1 633 1 637 0.0 1053
Msa1350700 MtrunA17_Chr2g0331511 78.336 637 128 4 1 635 1 629 0.0 1048
Msa1350700 MtrunA17_Chr1g0177591 70.228 571 148 4 1 571 24 572 0.0 830
Msa1350700 MtrunA17_Chr4g0003761 68.041 582 180 2 1 576 1 582 0.0 825
Msa1350700 MtrunA17_Chr2g0331521 57.939 592 241 5 1 586 1 590 0.0 723
Msa1350700 MtrunA17_Chr1g0177611 70.217 460 120 2 112 571 1 443 0.0 681
Msa1350700 MtrunA17_Chr1g0177631 72.174 460 111 3 112 571 1 443 0.0 671
Msa1350700 MtrunA17_Chr8g0390331 49.220 577 287 6 10 584 1 573 0.0 574
Msa1350700 MtrunA17_Chr1g0157601 48.381 556 275 6 14 565 8 555 0.0 548
Msa1350700 MtrunA17_Chr1g0157611 48.359 579 281 7 10 584 5 569 0.0 536
Msa1350700 MtrunA17_Chr1g0147631 47.708 589 295 7 9 590 6 588 0.0 525
Msa1350700 MtrunA17_Chr1g0157621 46.935 571 287 7 45 608 1 562 3.00e-174 507
Msa1350700 MtrunA17_Chr5g0415791 36.581 585 348 11 14 582 19 596 1.93e-131 399
Msa1350700 MtrunA17_Chr4g0059971 37.611 561 338 7 13 563 23 581 5.57e-128 390
Msa1350700 MtrunA17_Chr5g0422881 35.654 589 360 9 8 586 3 582 3.66e-127 387
Msa1350700 MtrunA17_Chr4g0059991 34.761 607 366 10 9 599 7 599 5.15e-125 382
Msa1350700 MtrunA17_Chr7g0255601 36.111 612 360 15 14 611 17 611 1.41e-124 381
Msa1350700 MtrunA17_Chr4g0059981 36.333 589 349 11 13 581 14 596 1.94e-120 370
Msa1350700 MtrunA17_Chr7g0255611 33.612 598 374 11 10 595 15 601 9.01e-119 366
Msa1350700 MtrunA17_Chr7g0255621 32.550 596 379 12 16 597 12 598 5.98e-115 356
Msa1350700 MtrunA17_Chr8g0362781 34.991 583 354 12 1 563 1 578 6.50e-114 353
Msa1350700 MtrunA17_Chr8g0375311 35.818 550 333 10 24 563 40 579 2.86e-113 351
Msa1350700 MtrunA17_Chr8g0375291 35.780 545 330 11 24 558 40 574 3.17e-112 348
Msa1350700 MtrunA17_Chr3g0104011 34.483 551 338 11 24 563 22 560 6.76e-107 334
Msa1350700 MtrunA17_Chr4g0005901 35.219 548 336 10 24 563 32 568 7.80e-107 334
Msa1350700 MtrunA17_Chr7g0241741 34.982 566 330 11 14 557 3 552 1.11e-106 333
Msa1350700 MtrunA17_Chr4g0060001 33.278 598 369 13 9 588 14 599 6.14e-106 333
Msa1350700 MtrunA17_Chr8g0375321 33.391 581 362 10 2 565 6 578 7.25e-106 332
Msa1350700 MtrunA17_Chr8g0375351 34.182 550 342 10 24 563 40 579 3.05e-105 330
Msa1350700 MtrunA17_Chr8g0375361 34.909 550 338 10 24 563 39 578 3.37e-103 325
Msa1350700 MtrunA17_Chr7g0240271 32.628 567 352 10 13 557 3 561 5.91e-103 325
Msa1350700 MtrunA17_Chr8g0375341 33.818 550 344 10 24 563 40 579 9.66e-103 324
Msa1350700 MtrunA17_Chr8g0375331 34.109 516 324 8 34 541 34 541 2.07e-100 317
Msa1350700 MtrunA17_Chr8g0362801 35.258 485 292 9 112 580 1 479 1.64e-98 309
Msa1350700 MtrunA17_Chr7g0240281 32.482 548 348 11 24 557 24 563 4.16e-98 312
Msa1350700 MtrunA17_Chr5g0399061 32.451 567 355 11 24 576 27 579 1.30e-96 308
Msa1350700 MtrunA17_Chr3g0142101 32.759 580 346 15 24 591 35 582 4.45e-95 304
Msa1350700 MtrunA17_Chr7g0261811 33.218 578 357 12 35 597 38 601 2.03e-94 303
Msa1350700 MtrunA17_Chr7g0261881 32.639 576 350 12 35 591 38 594 5.93e-93 298
Msa1350700 MtrunA17_Chr3g0142091 32.635 573 356 11 2 563 3 556 5.44e-91 293
Msa1350700 MtrunA17_Chr4g0014781 33.275 571 340 14 4 563 10 550 7.75e-91 292
Msa1350700 MtrunA17_Chr5g0399071 32.028 562 347 13 22 563 21 567 2.41e-90 291
Msa1350700 MtrunA17_Chr2g0325951 33.333 576 339 14 1 563 1 544 3.41e-90 290
Msa1350700 MtrunA17_Chr7g0261851 31.908 608 375 13 11 601 12 597 7.79e-89 288
Msa1350700 MtrunA17_Chr7g0214731 32.594 586 355 14 26 585 63 634 8.83e-89 289
Msa1350700 MtrunA17_Chr7g0261771 31.771 576 363 11 35 595 42 602 9.77e-89 288
Msa1350700 MtrunA17_Chr3g0114501 33.641 541 332 14 35 563 33 558 1.59e-88 287
Msa1350700 MtrunA17_Chr4g0014791 33.159 573 336 14 4 563 10 548 2.23e-88 285
Msa1350700 MtrunA17_Chr4g0014871 32.513 569 349 12 4 563 10 552 3.12e-88 285
Msa1350700 MtrunA17_Chr2g0325961 33.333 576 340 13 1 563 1 545 2.95e-87 282
Msa1350700 MtrunA17_Chr2g0326211 33.451 568 336 12 10 563 5 544 1.54e-86 280
Msa1350700 MtrunA17_Chr7g0261791 31.780 601 363 14 20 599 23 597 1.70e-86 282
Msa1350700 MtrunA17_Chr1g0187241 31.670 581 354 15 24 582 26 585 3.31e-86 281
Msa1350700 MtrunA17_Chr4g0056431 30.903 576 373 10 24 585 25 589 3.76e-86 281
Msa1350700 MtrunA17_Chr5g0439381 32.586 580 363 11 24 597 28 585 4.85e-86 280
Msa1350700 MtrunA17_Chr3g0112671 31.185 574 354 13 23 583 31 576 1.24e-85 279
Msa1350700 MtrunA17_Chr3g0077151 31.734 542 331 10 28 563 32 540 1.55e-85 278
Msa1350700 MtrunA17_Chr4g0014801 32.218 568 348 13 4 563 10 548 1.64e-85 278
Msa1350700 MtrunA17_Chr4g0014841 31.754 570 348 13 4 563 10 548 2.48e-84 275
Msa1350700 MtrunA17_Chr5g0415841 32.684 462 295 9 112 563 1 456 8.17e-84 271
Msa1350700 MtrunA17_Chr1g0166791 32.620 561 334 16 24 563 24 561 1.39e-83 274
Msa1350700 MtrunA17_Chr2g0284701 30.233 602 389 15 1 581 11 602 2.39e-83 273
Msa1350700 MtrunA17_Chr4g0008651 31.927 545 348 12 35 572 45 573 5.37e-83 272
Msa1350700 MtrunA17_Chr3g0133341 32.394 568 353 12 15 569 5 554 1.12e-82 271
Msa1350700 MtrunA17_Chr1g0166711 32.526 578 350 15 35 593 36 592 1.42e-82 271
Msa1350700 MtrunA17_Chr1g0193391 29.319 631 402 15 14 634 7 603 2.30e-82 271
Msa1350700 MtrunA17_Chr7g0240381 29.663 563 360 13 35 585 40 578 4.46e-82 270
Msa1350700 MtrunA17_Chr4g0063591 31.294 572 364 12 24 583 22 576 5.01e-82 269
Msa1350700 MtrunA17_Chr3g0112611 31.291 604 379 14 1 585 1 587 4.57e-81 267
Msa1350700 MtrunA17_Chr7g0240131 33.696 460 281 11 112 557 1 450 6.16e-81 263
Msa1350700 MtrunA17_Chr7g0240181 33.478 460 282 11 112 557 1 450 2.50e-80 262
Msa1350700 MtrunA17_Chr7g0240211 33.478 460 282 11 112 557 1 450 2.78e-80 262
Msa1350700 MtrunA17_Chr7g0235521 33.478 460 282 11 112 557 1 450 6.06e-80 261
Msa1350700 MtrunA17_Chr8g0353031 34.120 551 315 10 26 557 20 541 2.43e-79 262
Msa1350700 MtrunA17_Chr2g0276751 29.682 566 369 12 25 583 39 582 1.15e-78 261
Msa1350700 MtrunA17_Chr7g0271221 30.598 585 373 13 15 590 8 568 7.79e-77 256
Msa1350700 MtrunA17_Chr4g0014861 34.651 430 257 10 143 563 13 427 7.16e-76 249
Msa1350700 MtrunA17_Chr7g0214461 29.592 588 379 14 10 583 63 629 1.01e-75 254
Msa1350700 MtrunA17_Chr1g0166741 31.354 539 329 15 24 546 27 540 1.53e-75 252
Msa1350700 MtrunA17_Chr8g0379971 29.091 605 385 14 13 576 2 603 8.79e-75 251
Msa1350700 MtrunA17_Chr1g0166771 31.418 522 317 16 44 549 11 507 8.85e-75 249
Msa1350700 MtrunA17_Chr7g0240151 32.826 460 267 12 112 557 1 432 3.18e-74 245
Msa1350700 MtrunA17_Chr8g0379991 32.007 578 340 15 45 572 1 575 2.06e-73 246
Msa1350700 MtrunA17_Chr5g0400371 27.367 581 402 10 9 579 102 672 2.27e-73 249
Msa1350700 MtrunA17_Chr7g0261661 30.661 499 321 9 112 597 1 487 2.50e-73 244
Msa1350700 MtrunA17_Chr7g0218851 30.127 551 357 10 25 563 47 581 1.81e-70 239
Msa1350700 MtrunA17_Chr8g0362711 29.525 569 340 15 26 562 26 565 7.90e-70 237
Msa1350700 MtrunA17_Chr1g0213711 28.019 621 381 17 14 610 8 586 2.29e-69 236
Msa1350700 MtrunA17_Chr4g0011471 29.588 534 359 9 39 563 31 556 3.95e-69 235
Msa1350700 MtrunA17_Chr7g0217461 30.050 599 387 16 1 581 2 586 6.57e-69 234
Msa1350700 MtrunA17_Chr4g0054891 30.220 546 338 14 36 560 122 645 1.25e-68 236
Msa1350700 MtrunA17_Chr1g0166731 32.083 480 298 12 111 576 9 474 6.61e-68 229
Msa1350700 MtrunA17_Chr5g0415961 27.817 568 352 11 26 562 26 566 1.10e-66 228
Msa1350700 MtrunA17_Chr3g0082631 30.963 436 268 9 146 560 30 453 1.51e-65 223
Msa1350700 MtrunA17_Chr1g0147591 52.577 194 87 4 153 343 9 200 7.67e-63 206
Msa1350700 MtrunA17_Chr4g0069581 31.976 491 299 15 85 563 47 514 2.26e-61 214
Msa1350700 MtrunA17_Chr6g0451841 28.899 436 253 12 157 563 127 534 7.29e-56 198
Msa1350700 MtrunA17_Chr4g0011041 26.306 536 376 10 39 563 51 578 9.85e-56 199
Msa1350700 MtrunA17_Chr7g0261751 28.998 469 271 12 35 455 42 496 1.80e-52 188
Msa1350700 MtrunA17_Chr3g0112631 32.517 286 183 4 293 576 3 280 7.58e-49 172
Msa1350700 MtrunA17_Chr3g0142121 30.897 301 184 5 296 591 3 284 6.48e-47 167
Msa1350700 MtrunA17_Chr7g0261731 33.231 325 194 8 24 338 31 342 1.29e-45 165
Msa1350700 MtrunA17_Chr4g0060071 31.408 277 171 6 289 562 32 292 7.09e-42 154
Msa1350700 MtrunA17_Chr3g0142111 34.028 288 174 9 24 301 46 327 1.79e-38 145
Msa1350700 MtrunA17_Chr7g0234381 28.696 460 277 12 111 563 3 418 4.01e-37 143
Msa1350700 MtrunA17_Chr7g0261721 31.304 230 155 2 368 595 4 232 5.23e-35 132
Msa1350700 MtrunA17_Chr7g0234181 27.840 449 273 12 122 563 9 413 6.27e-33 131
Msa1350700 MtrunA17_Chr7g0234151 27.826 460 281 12 111 563 3 418 1.72e-32 130
Msa1350700 MtrunA17_Chr2g0326221 32.203 236 128 5 330 563 15 220 7.47e-31 120
Msa1350700 MtrunA17_Chr1g0177601 77.049 61 14 0 54 114 1 61 9.44e-23 92.0
Msa1350700 MtrunA17_Chr1g0177621 77.049 61 14 0 54 114 1 61 9.44e-23 92.0
Msa1350700 MtrunA17_Chr8g0382591 42.063 126 67 4 293 414 3 126 9.17e-22 92.0
Msa1350700 MtrunA17_Chr1g0147581 42.857 112 58 1 428 539 10 115 2.00e-19 84.3
Msa1350700 MtrunA17_Chr3g0112651 31.220 205 122 6 99 294 9 203 5.86e-19 85.9
Msa1350700 MtrunA17_Chr7g0240221 32.407 108 63 1 13 110 6 113 9.25e-15 71.2
Msa1350700 MtrunA17_Chr7g0240191 32.407 108 63 1 13 110 6 113 9.25e-15 71.2
Msa1350700 MtrunA17_Chr7g0240161 32.407 108 63 1 13 110 6 113 9.25e-15 71.2
Msa1350700 MtrunA17_Chr7g0240141 32.407 108 63 1 13 110 6 113 1.61e-14 70.5
Msa1350700 MtrunA17_Chr4g0060061 36.792 106 65 2 136 240 8 112 7.75e-14 68.9
Msa1350700 MtrunA17_Chr8g0362791 38.372 86 53 0 29 114 41 126 2.83e-13 67.8
Msa1350700 MtrunA17_Chr7g0235511 31.818 110 63 2 13 110 6 115 1.01e-12 65.5
Msa1350700 MtrunA17_Chr5g0415851 45.588 68 37 0 38 105 6 73 7.01e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1350700 AT1G52190.1 56.282 581 245 6 11 583 6 585 0.0 684
Msa1350700 AT3G16180.1 55.631 586 250 8 11 588 6 589 0.0 668
Msa1350700 AT5G62680.1 37.500 592 348 12 7 582 26 611 4.15e-125 383
Msa1350700 AT1G68570.1 38.342 579 344 7 13 582 10 584 1.33e-124 381
Msa1350700 AT1G69870.1 34.188 585 369 9 17 591 42 620 1.47e-120 372
Msa1350700 AT3G47960.1 37.943 564 332 10 10 563 50 605 2.15e-119 369
Msa1350700 AT1G18880.1 35.017 594 364 11 10 591 3 586 6.55e-117 361
Msa1350700 AT5G11570.1 38.674 543 249 11 27 564 14 477 4.96e-115 353
Msa1350700 AT1G68570.2 37.545 554 333 7 38 582 5 554 1.34e-113 352
Msa1350700 AT2G02040.1 35.455 550 335 11 24 563 39 578 2.05e-112 349
Msa1350700 AT1G62200.1 36.813 546 321 9 24 559 50 581 2.07e-110 344
Msa1350700 AT1G27080.1 34.909 550 334 11 23 563 11 545 6.29e-110 343
Msa1350700 AT5G28470.2 35.072 556 342 10 10 556 1 546 3.19e-109 340
Msa1350700 AT5G28470.1 35.072 556 340 11 10 556 1 544 5.29e-107 334
Msa1350700 AT1G62200.2 35.304 575 319 10 24 559 50 610 2.52e-105 332
Msa1350700 AT1G62200.3 35.304 575 319 10 24 559 64 624 3.59e-105 332
Msa1350700 AT3G54140.1 35.091 550 336 12 24 563 22 560 1.81e-104 328
Msa1350700 AT3G54140.2 35.091 550 336 12 24 563 22 560 1.81e-104 328
Msa1350700 AT3G45660.1 34.256 578 353 10 9 583 4 557 1.77e-103 325
Msa1350700 AT3G45660.3 34.256 578 353 10 9 583 4 557 1.77e-103 325
Msa1350700 AT3G45660.2 34.256 578 353 10 9 583 25 578 3.10e-103 325
Msa1350700 AT5G01180.2 33.948 542 340 8 24 557 23 554 1.50e-100 318
Msa1350700 AT5G01180.3 33.948 542 340 8 24 557 23 554 1.50e-100 318
Msa1350700 AT5G01180.1 33.948 542 340 8 24 557 23 554 1.50e-100 318
Msa1350700 AT1G27080.2 34.556 518 315 11 55 563 1 503 1.87e-99 314
Msa1350700 AT3G45650.1 33.989 559 343 10 9 563 4 540 3.98e-99 314
Msa1350700 AT3G45650.2 32.479 585 343 11 9 563 4 566 1.98e-93 300
Msa1350700 AT2G26690.1 32.200 559 364 10 24 578 22 569 1.16e-91 295
Msa1350700 AT3G54450.1 32.931 580 329 13 24 577 10 555 1.35e-91 294
Msa1350700 AT2G02020.1 32.294 545 320 10 24 563 40 540 6.04e-91 292
Msa1350700 AT1G69860.1 33.031 551 338 11 24 563 16 546 1.07e-89 289
Msa1350700 AT3G45710.1 32.149 563 349 9 9 563 4 541 9.49e-89 287
Msa1350700 AT2G26690.2 32.294 545 354 10 38 578 3 536 9.51e-89 286
Msa1350700 AT3G45720.1 32.294 545 336 11 26 563 19 537 4.84e-87 282
Msa1350700 AT2G26690.3 32.523 535 346 10 48 578 1 524 1.42e-86 280
Msa1350700 AT5G46050.1 31.481 540 343 10 20 546 19 544 1.91e-86 281
Msa1350700 AT3G21670.1 31.376 596 380 11 11 596 12 588 3.16e-86 281
Msa1350700 AT3G45700.1 30.102 588 361 11 12 591 2 547 8.41e-83 271
Msa1350700 AT1G33440.1 30.680 603 367 15 22 607 32 600 9.77e-83 272
Msa1350700 AT3G53960.1 30.142 564 365 12 35 585 46 593 2.97e-82 271
Msa1350700 AT1G12110.1 32.570 568 339 17 20 563 19 566 3.43e-82 270
Msa1350700 AT1G22540.1 32.234 546 340 8 24 563 28 549 4.36e-82 269
Msa1350700 AT2G40460.1 32.203 531 327 12 35 553 33 542 2.06e-81 268
Msa1350700 AT5G46040.1 31.931 523 331 10 35 546 36 544 5.00e-81 267
Msa1350700 AT1G72125.1 31.099 537 341 9 35 563 38 553 8.72e-81 266
Msa1350700 AT3G45680.1 31.746 567 349 12 7 563 1 539 1.47e-80 265
Msa1350700 AT5G13400.1 31.818 572 357 13 26 579 64 620 1.95e-80 267
Msa1350700 AT1G59740.1 30.598 585 368 17 12 577 25 590 3.20e-80 265
Msa1350700 AT2G37900.1 29.636 550 352 11 23 560 34 560 3.35e-80 265
Msa1350700 AT1G72140.1 32.305 551 309 13 35 563 43 551 5.75e-80 263
Msa1350700 AT2G02020.2 30.074 542 315 10 24 563 40 519 5.47e-76 252
Msa1350700 AT2G37900.2 30.101 495 312 10 77 560 10 481 5.97e-76 251
Msa1350700 AT1G27040.1 30.839 548 349 10 26 562 27 555 1.23e-75 252
Msa1350700 AT1G27040.2 30.839 548 349 10 26 562 23 551 1.42e-75 252
Msa1350700 AT1G32450.1 29.021 572 382 10 36 588 47 613 1.28e-74 251
Msa1350700 AT1G22550.1 29.412 561 335 12 28 563 32 556 2.86e-73 246
Msa1350700 AT5G46050.2 32.207 444 280 8 112 546 1 432 3.20e-73 243
Msa1350700 AT1G72120.1 31.512 549 319 12 35 563 38 549 6.88e-73 245
Msa1350700 AT1G72130.1 30.144 554 327 12 24 563 23 530 5.75e-72 242
Msa1350700 AT1G27040.3 30.899 534 339 10 40 562 9 523 6.33e-72 242
Msa1350700 AT1G22570.1 30.280 535 327 10 28 544 32 538 8.92e-72 242
Msa1350700 AT4G21680.1 28.000 600 374 15 3 571 6 578 1.77e-69 236
Msa1350700 AT3G45690.1 28.472 576 334 15 14 582 6 510 2.68e-69 234
Msa1350700 AT1G22570.2 29.848 526 323 10 37 544 4 501 3.44e-69 234
Msa1350700 AT1G69850.1 29.381 565 355 13 26 562 25 573 2.87e-68 233
Msa1350700 AT5G19640.1 28.571 581 367 17 27 590 60 609 6.36e-63 219
Msa1350700 AT5G14940.1 28.546 557 348 12 24 558 5 533 2.15e-60 211
Msa1350700 AT1G72130.2 29.412 442 270 8 132 563 3 412 2.58e-58 202
Msa1350700 AT1G72130.3 29.412 442 270 8 132 563 3 412 2.58e-58 202
Msa1350700 AT3G01350.1 26.884 584 374 15 24 582 5 560 2.83e-55 197
Msa1350700 AT3G25260.1 27.547 530 325 14 40 562 35 512 8.47e-55 195
Msa1350700 AT5G62730.1 26.855 566 357 15 19 562 49 579 6.18e-54 194
Msa1350700 AT5G62730.2 26.909 550 345 15 35 562 6 520 1.84e-51 186
Msa1350700 AT3G25280.1 24.371 517 338 11 53 562 48 518 9.63e-42 159
Msa1350700 AT2G38100.2 24.815 540 352 17 54 580 2 500 8.20e-27 115
Msa1350700 AT2G38100.1 24.815 540 352 17 54 580 18 516 2.91e-26 113
Msa1350700 AT2G38100.3 24.815 540 352 17 54 580 24 522 3.18e-26 113

Find 151 sgRNAs with CRISPR-Local

Find 548 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGTTGCTGCTTCCCTTTC+TGG 0.066048 tig0011794:+35406 Msa1350700:CDS
CTCTAACACCACTTTATTAT+TGG 0.121941 tig0011794:-36000 None:intergenic
CTTTGTAATAAAACTCATTT+TGG 0.123205 tig0011794:-35363 None:intergenic
GCTGAAATGTTCAATGTTAT+TGG 0.153417 tig0011794:+35340 Msa1350700:CDS
AAATATCAAATCAAATTTAT+TGG 0.188207 tig0011794:-36222 None:intergenic
CCTCTAGCATCAAAGATAAA+AGG 0.197769 tig0011794:+35121 Msa1350700:CDS
TCCAATTGCTATCAGAATTA+AGG 0.240613 tig0011794:-33955 None:intergenic
GTCATTTCGACAAGTATTAT+TGG 0.245462 tig0011794:+35539 Msa1350700:CDS
TCCCAATAACAAAAGGGTTT+TGG 0.276351 tig0011794:+34037 Msa1350700:CDS
ACTTGCTAAGATGGCAAGTT+TGG 0.278150 tig0011794:+26860 Msa1350700:CDS
TGATAGTTGCAATATTAATA+TGG 0.280542 tig0011794:+35071 Msa1350700:CDS
CAATGGAATAACTTTAATAA+TGG 0.287573 tig0011794:-34924 None:intergenic
TCTAACACCACTTTATTATT+GGG 0.298906 tig0011794:-35999 None:intergenic
GCTTGCACCTCAACTTTGTT+TGG 0.302874 tig0011794:+35309 Msa1350700:CDS
GCTGCTTCCCTTTCTGGATT+GGG 0.304672 tig0011794:+35412 Msa1350700:CDS
CAAAGAGTTTCCAAAGAGTA+TGG 0.305218 tig0011794:+35381 Msa1350700:CDS
ATTAACATTGGAGGCTCATT+TGG 0.306358 tig0011794:+34971 Msa1350700:CDS
TTAGTATGCAGTTGGGCTTA+TGG 0.310648 tig0011794:+35601 Msa1350700:CDS
CGTTTCCTAGGTGTTGGATT+AGG 0.313860 tig0011794:+27026 Msa1350700:CDS
AGGTTCTTCTATCAGTTTCC+TGG 0.314838 tig0011794:+27046 Msa1350700:CDS
TAGCATTTCTCCAAATGAAT+TGG 0.318041 tig0011794:-35860 None:intergenic
TGCTGCTTCCCTTTCTGGAT+TGG 0.320525 tig0011794:+35411 Msa1350700:CDS
CTTGGTTGGAAAGTTGGTTT+TGG 0.322333 tig0011794:+34143 Msa1350700:CDS
GATAAGATACCAATGATAAA+AGG 0.324542 tig0011794:-26734 None:intergenic
TTCTTTGGACCGATACTTAC+GGG 0.329002 tig0011794:-35148 None:intergenic
TATAGTTGGTCCAATTCATT+TGG 0.330146 tig0011794:+35850 Msa1350700:three_prime_UTR
ATTGCATGTTCTTTAGCTTT+TGG 0.333648 tig0011794:+33987 Msa1350700:CDS
TCCCTTTCTGGATTGGGAAT+GGG 0.346075 tig0011794:+35418 Msa1350700:CDS
TTCTGGATTGGGAATGGGTG+TGG 0.356070 tig0011794:+35423 Msa1350700:CDS
TTCCCTTTCTGGATTGGGAA+TGG 0.361518 tig0011794:+35417 Msa1350700:CDS
ATCAAATACAATATCATGTT+TGG 0.362607 tig0011794:-26891 None:intergenic
GCCTTAATTCTGATAGCAAT+TGG 0.366958 tig0011794:+33954 Msa1350700:CDS
TCATTTCGACAAGTATTATT+GGG 0.368455 tig0011794:+35540 Msa1350700:CDS
AAACATGATATTGTATTTGA+TGG 0.369089 tig0011794:+26893 Msa1350700:CDS
TTCATAAATGAGAAGTGTTA+TGG 0.372275 tig0011794:-36041 None:intergenic
AGACCACCCTTTCTTCTTTG+TGG 0.372589 tig0011794:-26701 None:intergenic
GCAACACTAGCCATACTCTT+TGG 0.373682 tig0011794:-35391 None:intergenic
CTAACCTTGTCATCAATTTG+TGG 0.379224 tig0011794:-35706 None:intergenic
TTCTATCTATCTTCTGCATC+AGG 0.385660 tig0011794:+26586 Msa1350700:five_prime_UTR
TTTATTGCAGATTCTTATCT+GGG 0.386360 tig0011794:+27002 Msa1350700:CDS
GCACCTCAACTTTGTTTGGC+TGG 0.386955 tig0011794:+35313 Msa1350700:CDS
CTTTCCAACCAAGATGATCT+TGG 0.388174 tig0011794:-34133 None:intergenic
TCCAATGTGAGTGAAGAAAA+TGG 0.388185 tig0011794:+35643 Msa1350700:CDS
GGGAATGGGTGTGGGAAACT+TGG 0.388749 tig0011794:+35432 Msa1350700:CDS
CCAAAGAAAAGAATGGGAAT+TGG 0.389856 tig0011794:+35163 Msa1350700:CDS
GTTATTCCATTGTGGTCAAC+GGG 0.404654 tig0011794:+34935 Msa1350700:CDS
CTGGGTCGTTTCCTAGGTGT+TGG 0.410951 tig0011794:+27020 Msa1350700:CDS
TAGTGAAGAAAGTGACTTGA+AGG 0.415566 tig0011794:+35804 Msa1350700:CDS
CTTGCTAAGATGGCAAGTTT+GGG 0.419819 tig0011794:+26861 Msa1350700:CDS
AGGAGGAAGATTTGTGATAG+AGG 0.420778 tig0011794:+35824 Msa1350700:exon
TCTTATCTGGGTCGTTTCCT+AGG 0.421802 tig0011794:+27014 Msa1350700:CDS
TTCAGTTGAATGTTCCTCCT+TGG 0.424820 tig0011794:-35668 None:intergenic
AAGATAATCCCAATAACAAA+AGG 0.428097 tig0011794:+34030 Msa1350700:CDS
ATCAGCAACACCAGGTCAAT+TGG 0.433694 tig0011794:+33917 Msa1350700:CDS
TTTCTTTGGACCGATACTTA+CGG 0.443303 tig0011794:-35149 None:intergenic
GATCATCTTGGTTGGAAAGT+TGG 0.445341 tig0011794:+34137 Msa1350700:CDS
TCTTGAATGCTTTCTCAACC+TGG 0.450725 tig0011794:-35780 None:intergenic
TGTATTATTTAGTATGCAGT+TGG 0.452225 tig0011794:+35593 Msa1350700:CDS
ATTCTGATAGCAATTGGAAA+TGG 0.452946 tig0011794:+33960 Msa1350700:CDS
CAAAGAAAAGAATGGGAATT+GGG 0.454195 tig0011794:+35164 Msa1350700:CDS
TGAAGTGATATGTCTGTCTA+AGG 0.458837 tig0011794:-35011 None:intergenic
GAATGAGGCACTTGCTAAGA+TGG 0.459393 tig0011794:+26851 Msa1350700:CDS
TGTGATAGAGGGCTTATAGT+TGG 0.461708 tig0011794:+35836 Msa1350700:exon
AAAATGAATTCCACATAAAG+TGG 0.462640 tig0011794:-35949 None:intergenic
CTCTAGCATCAAAGATAAAA+GGG 0.463257 tig0011794:+35122 Msa1350700:CDS
AAGTATTATTGGGTTATAGC+TGG 0.466660 tig0011794:+35550 Msa1350700:CDS
ATCGGTCCAAAGAAAAGAAT+GGG 0.469148 tig0011794:+35157 Msa1350700:CDS
AGGCCGTGCCGACGGGATCA+TGG 0.474003 tig0011794:-33862 None:intergenic
AGTTAACTGAATTCAAGAAT+GGG 0.482214 tig0011794:+35755 Msa1350700:CDS
TATCGGTCCAAAGAAAAGAA+TGG 0.491019 tig0011794:+35156 Msa1350700:CDS
AAGCAGGAGGCCGTGCCGAC+GGG 0.491866 tig0011794:-33869 None:intergenic
TATAATGCTCAATACTAAAG+AGG 0.493221 tig0011794:-35458 None:intergenic
GAGTTAACTGAATTCAAGAA+TGG 0.495721 tig0011794:+35754 Msa1350700:CDS
GTGGAACTCACCACTTTATG+TGG 0.496601 tig0011794:+35939 Msa1350700:three_prime_UTR
TAATTTGCATCCACATTGCT+AGG 0.498729 tig0011794:+26523 Msa1350700:five_prime_UTR
TGATGCTAATGAAGAAGAAA+TGG 0.500210 tig0011794:+26664 Msa1350700:CDS
GGAGGAAGATTTGTGATAGA+GGG 0.504051 tig0011794:+35825 Msa1350700:exon
CAAGTGAAGGAAATGAAGGA+TGG 0.506863 tig0011794:+35494 Msa1350700:CDS
GTATTATTTAGTATGCAGTT+GGG 0.508088 tig0011794:+35594 Msa1350700:CDS
AGTTATTCCATTGTGGTCAA+CGG 0.510767 tig0011794:+34934 Msa1350700:CDS
TCTGGATTGGGAATGGGTGT+GGG 0.514033 tig0011794:+35424 Msa1350700:CDS
CAACAACCACAAAGAAGAAA+GGG 0.518980 tig0011794:+26695 Msa1350700:CDS
ACAACAACCACAAAGAAGAA+AGG 0.519344 tig0011794:+26694 Msa1350700:CDS
CACCCATTCCCAATCCAGAA+AGG 0.526547 tig0011794:-35420 None:intergenic
ATATACCTTAGTTTATCAGT+TGG 0.527422 tig0011794:-34368 None:intergenic
ACTTCAAGTGAAGGAAATGA+AGG 0.529330 tig0011794:+35490 Msa1350700:CDS
CAAGCAGGAGGCCGTGCCGA+CGG 0.529649 tig0011794:-33870 None:intergenic
TTGTTCCAACTGATAAACTA+AGG 0.530417 tig0011794:+34363 Msa1350700:CDS
AACATGATATTGTATTTGAT+GGG 0.530924 tig0011794:+26894 Msa1350700:CDS
ACCCATTCCCAATCCAGAAA+GGG 0.532709 tig0011794:-35419 None:intergenic
GCTTGCATCCATCCATCTGA+AGG 0.535358 tig0011794:+33888 Msa1350700:CDS
CAAAGAACCAGCTTGCTCAC+TGG 0.541714 tig0011794:+34239 Msa1350700:CDS
ACAATGTCTATTAACATTGG+AGG 0.542460 tig0011794:+34962 Msa1350700:CDS
AGAAAGGAAGCAATCAAAGA+AGG 0.553197 tig0011794:+35241 Msa1350700:CDS
ATCACAATGTCTATTAACAT+TGG 0.553488 tig0011794:+34959 Msa1350700:CDS
TGTTTCACCCAATAATAAAG+TGG 0.554057 tig0011794:+35992 Msa1350700:three_prime_UTR
AGCAATTTCACACCTGTGGT+TGG 0.554989 tig0011794:+26975 Msa1350700:CDS
GCTGTCATAATAGCTCTCAC+TGG 0.555613 tig0011794:+34098 Msa1350700:CDS
TGAAGAAAGTGACTTGAAGG+AGG 0.557542 tig0011794:+35807 Msa1350700:CDS
TCAGATGGATGGATGCAAGC+AGG 0.561264 tig0011794:-33885 None:intergenic
TGTGAAATTGCTAGCTGCAG+AGG 0.563133 tig0011794:-26964 None:intergenic
ATTTATTGCTGAACCATCTG+AGG 0.563406 tig0011794:-34858 None:intergenic
ATTCACAGCCTTCAGATGGA+TGG 0.564161 tig0011794:-33896 None:intergenic
AAGTGAAGGAAATGAAGGAT+GGG 0.565786 tig0011794:+35495 Msa1350700:CDS
ATATCCAAGATCATCTTGGT+TGG 0.566372 tig0011794:+34129 Msa1350700:CDS
AAAGGGAAGCCCGTAAGTAT+CGG 0.568768 tig0011794:+35139 Msa1350700:CDS
GGCTGTGAATCAGCAACACC+AGG 0.569578 tig0011794:+33909 Msa1350700:CDS
AGCTAGCAATTTCACACCTG+TGG 0.572182 tig0011794:+26971 Msa1350700:CDS
AGATAATCCCAATAACAAAA+GGG 0.574117 tig0011794:+34031 Msa1350700:CDS
GCTGATTCACAGCCTTCAGA+TGG 0.574719 tig0011794:-33900 None:intergenic
GAAAATACTACTTCAAGTGA+AGG 0.575290 tig0011794:+35481 Msa1350700:CDS
TGCAAAACCAGTGAGCAAGC+TGG 0.577546 tig0011794:-34246 None:intergenic
GTATATATCCAAGATCATCT+TGG 0.577864 tig0011794:+34125 Msa1350700:CDS
CTGATAGCAATTGGAAATGG+TGG 0.577884 tig0011794:+33963 Msa1350700:CDS
GGATATTTGAATGATACTCA+TGG 0.580138 tig0011794:+35262 Msa1350700:CDS
CAGCCATGATCCCGTCGGCA+CGG 0.582476 tig0011794:+33859 Msa1350700:CDS
GGTTTCTGATAATATTAACA+AGG 0.582713 tig0011794:+35516 Msa1350700:CDS
GATAAAAGCATGAGTGCTGC+TGG 0.582922 tig0011794:-34170 None:intergenic
ATAACAGAATAAGATCCTGC+TGG 0.586668 tig0011794:-35046 None:intergenic
TAGTGATGAAACTAGTTCAA+AGG 0.587940 tig0011794:+35726 Msa1350700:CDS
ATGGTTCAGCAATAAATCGT+TGG 0.590419 tig0011794:+34864 Msa1350700:CDS
TCACACTTTCAAGTACCAGC+AGG 0.590847 tig0011794:+35031 Msa1350700:CDS
TTATTAAAGTTATTCCATTG+TGG 0.594692 tig0011794:+34927 Msa1350700:CDS
GCAATAAAAGCACCAACCAC+AGG 0.595083 tig0011794:-26987 None:intergenic
ATCCATGTCTCATAATCTCA+AGG 0.595630 tig0011794:-36168 None:intergenic
GATACCAATGATAAAAGGCA+TGG 0.603181 tig0011794:-26729 None:intergenic
GAACAAGATATAGCCTCAGA+TGG 0.606415 tig0011794:+34845 Msa1350700:CDS
GTTAACTGAATTCAAGAATG+GGG 0.610141 tig0011794:+35756 Msa1350700:CDS
GAGTGAAGAAAATGGTTCCA+AGG 0.614654 tig0011794:+35651 Msa1350700:CDS
AATAACATTGCCAATTGACC+TGG 0.617455 tig0011794:-33927 None:intergenic
GTGATTCCCGTTGACCACAA+TGG 0.620739 tig0011794:-34941 None:intergenic
TTGGATACTTCATCAACTGT+AGG 0.630013 tig0011794:-35625 None:intergenic
GTATCTGAGTAGATATGCCA+AGG 0.632803 tig0011794:-26932 None:intergenic
GTGATGGTAAAATTCAGGAG+AGG 0.632807 tig0011794:-34321 None:intergenic
AAATCCACAAATTGATGACA+AGG 0.634426 tig0011794:+35702 Msa1350700:CDS
ATTTCATCCAATAAAAGATG+AGG 0.635812 tig0011794:-35912 None:intergenic
GTTTCTGATAATATTAACAA+GGG 0.642765 tig0011794:+35517 Msa1350700:CDS
GATGGATGGATGCAAGCAGG+AGG 0.653585 tig0011794:-33882 None:intergenic
GACCTTGAGATTATGAGACA+TGG 0.661529 tig0011794:+36166 Msa1350700:three_prime_UTR
ATACCAGCCAAACAAAGTTG+AGG 0.665106 tig0011794:-35316 None:intergenic
AAGAACCTAATCCAACACCT+AGG 0.671591 tig0011794:-27031 None:intergenic
TATAGGGAATGTCACTGCTG+TGG 0.671719 tig0011794:+33832 Msa1350700:intron
CAACCACAAAGAAGAAAGGG+TGG 0.676663 tig0011794:+26698 Msa1350700:CDS
GGATCATACAGACTTCACCT+TGG 0.681705 tig0011794:+26915 Msa1350700:CDS
TTAACTGAATTCAAGAATGG+GGG 0.686853 tig0011794:+35757 Msa1350700:CDS
GTTAACAGCCATGATCCCGT+CGG 0.691478 tig0011794:+33854 Msa1350700:CDS
GTTTATCAGTTGGAACAACG+AGG 0.692730 tig0011794:-34358 None:intergenic
GTAGCTAGCACCTAGCAATG+TGG 0.702695 tig0011794:-26533 None:intergenic
TGAAGAAAATGGTTCCAAGG+AGG 0.722573 tig0011794:+35654 Msa1350700:CDS
TTTATTGGATGAAATCTACG+TGG 0.723455 tig0011794:+35920 Msa1350700:three_prime_UTR
TGTTGAAAATGTCTGCAATG+TGG 0.749104 tig0011794:+35287 Msa1350700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTTACTAATTAAAAAAA+TGG + tig0011794:26616-26635 Msa1350700:exon 10.0%
!!! CTATTATTAAGTTTAATTTT+GGG + tig0011794:27128-27147 Msa1350700:intron 10.0%
!! AAAAAAAAAAAAGTCATTAT+AGG + tig0011794:27316-27335 Msa1350700:intron 10.0%
!! TATTATATTATATCCATAAA+CGG + tig0011794:28240-28259 Msa1350700:intron 10.0%
!!! CATTTTAAAACAAATTTTTT+TGG - tig0011794:28890-28909 None:intergenic 10.0%
!! CTAAAATTAACTTAAAAATA+GGG - tig0011794:29316-29335 None:intergenic 10.0%
!! ACTAAAATTAACTTAAAAAT+AGG - tig0011794:29317-29336 None:intergenic 10.0%
!!! CTACTTTTTATTTTATTTTT+GGG - tig0011794:29703-29722 None:intergenic 10.0%
!!! ACTACTTTTTATTTTATTTT+TGG - tig0011794:29704-29723 None:intergenic 10.0%
!!! GTTTTTTTATTAAATAAATG+TGG + tig0011794:29806-29825 Msa1350700:intron 10.0%
!!! AAAATTATTTCTAATAATCT+TGG + tig0011794:30161-30180 Msa1350700:intron 10.0%
!!! TTGTTTCATATTTTATAATA+GGG - tig0011794:30282-30301 None:intergenic 10.0%
!!! CACATATTTTAATTTTATTT+TGG - tig0011794:30306-30325 None:intergenic 10.0%
!!! AATTTATTTTTATTAAATGG+TGG + tig0011794:30447-30466 Msa1350700:intron 10.0%
!! ATATTTAATTATTAAGAAAG+AGG + tig0011794:30532-30551 Msa1350700:intron 10.0%
!! TATTTAATTATTAAGAAAGA+GGG + tig0011794:30533-30552 Msa1350700:intron 10.0%
!!! AATATAAATTTTACTTTTCA+AGG + tig0011794:30586-30605 Msa1350700:intron 10.0%
!!! ATATAAATTTTACTTTTCAA+GGG + tig0011794:30587-30606 Msa1350700:intron 10.0%
!!! TTTTAAATTTTATGAAAACA+AGG - tig0011794:31678-31697 None:intergenic 10.0%
!!! TGTTTTCATAAAATTTAAAA+AGG + tig0011794:31678-31697 Msa1350700:intron 10.0%
!!! AATTGTCATTTTTTTTATTA+GGG - tig0011794:32694-32713 None:intergenic 10.0%
!!! AAATTGTCATTTTTTTTATT+AGG - tig0011794:32695-32714 None:intergenic 10.0%
!!! AATAAAAAAAATGACAATTT+TGG + tig0011794:32695-32714 Msa1350700:intron 10.0%
!! TGATTTATCAAAAATAAATT+AGG + tig0011794:33373-33392 Msa1350700:intron 10.0%
!! TGATTTATCAAAAATAAATT+AGG + tig0011794:33373-33392 Msa1350700:intron 10.0%
!! AATTAATATTCAGAAATTAT+TGG + tig0011794:33764-33783 Msa1350700:intron 10.0%
!!! TGAATTATTAGTTTTTTTTT+AGG + tig0011794:36060-36079 Msa1350700:three_prime_UTR 10.0%
!! CCAAAATTAAACTTAATAAT+AGG - tig0011794:27130-27149 None:intergenic 15.0%
!!! CCTATTATTAAGTTTAATTT+TGG + tig0011794:27127-27146 Msa1350700:intron 15.0%
!!! TTATTTCTTACATTTAAGAT+CGG - tig0011794:27195-27214 None:intergenic 15.0%
!! TATTCCTAATAAAATTTATG+TGG + tig0011794:27842-27861 Msa1350700:intron 15.0%
!! ACGATAAAATAATGAATAAT+TGG + tig0011794:28010-28029 Msa1350700:intron 15.0%
!! GTATTCAAGATTATAAAATT+TGG + tig0011794:28159-28178 Msa1350700:intron 15.0%
!! AAATTATCCTTATTAACTAT+TGG - tig0011794:29018-29037 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + tig0011794:29017-29036 Msa1350700:intron 15.0%
!! ATTCCTAAAAAAAAATTATG+TGG + tig0011794:29146-29165 Msa1350700:intron 15.0%
!!! ATTTAACCCTTTATTTTTTA+GGG - tig0011794:29191-29210 None:intergenic 15.0%
!!! TATTTAACCCTTTATTTTTT+AGG - tig0011794:29192-29211 None:intergenic 15.0%
!!! AATTGAAAGAAAATTTTAGA+GGG - tig0011794:29256-29275 None:intergenic 15.0%
!!! AAATTGAAAGAAAATTTTAG+AGG - tig0011794:29257-29276 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - tig0011794:29285-29304 None:intergenic 15.0%
!! GAAAAGTTTGTATATTTATA+AGG + tig0011794:29660-29679 Msa1350700:intron 15.0%
!! TACATAATATATGTAAAGTT+CGG - tig0011794:29752-29771 None:intergenic 15.0%
!!! TTATTTTCATACATATACTT+TGG + tig0011794:29867-29886 Msa1350700:intron 15.0%
!!! GAAATAATTTTTTTTATCGA+AGG - tig0011794:30152-30171 None:intergenic 15.0%
!!! GTTGTTTCATATTTTATAAT+AGG - tig0011794:30283-30302 None:intergenic 15.0%
!! TATAATATTCTAAACATTCT+TGG - tig0011794:30901-30920 None:intergenic 15.0%
!! TTCATAAAAAAAAATGATCT+AGG + tig0011794:31550-31569 Msa1350700:intron 15.0%
!! AAATAGAATGAAATAATCAT+TGG + tig0011794:31845-31864 Msa1350700:intron 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + tig0011794:31972-31991 Msa1350700:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + tig0011794:32012-32031 Msa1350700:intron 15.0%
!!! TGAAAACTTTAACATTTTTA+AGG - tig0011794:32144-32163 None:intergenic 15.0%
!!! AATTTTTTTATGAAAGTTTG+TGG - tig0011794:32185-32204 None:intergenic 15.0%
!! ATTCTACTTTCTTAATAAAT+GGG - tig0011794:32265-32284 None:intergenic 15.0%
!!! AAAAAATTATTCTAAGACAA+GGG - tig0011794:32333-32352 None:intergenic 15.0%
!!! TAAAAAATTATTCTAAGACA+AGG - tig0011794:32334-32353 None:intergenic 15.0%
!!! TTGTCTTAGAATAATTTTTT+AGG + tig0011794:32333-32352 Msa1350700:intron 15.0%
!!! AAATTAAGTTTTATGTTGAA+AGG + tig0011794:32582-32601 Msa1350700:intron 15.0%
!!! ATTGTCATTTTTTTTATTAG+GGG - tig0011794:32693-32712 None:intergenic 15.0%
!! AATATAATAGTATTACTTTG+TGG - tig0011794:32955-32974 None:intergenic 15.0%
!!! TTTCTTATTTGTTTAAATCA+AGG - tig0011794:33246-33265 None:intergenic 15.0%
!! ATTTAAACAAATAAGAAAGT+GGG + tig0011794:33248-33267 Msa1350700:intron 15.0%
!!! AAAAATTTGATTTCATTTTC+AGG + tig0011794:34789-34808 Msa1350700:intron 15.0%
!!! GCATATTTTGTTTATTATTT+TGG + tig0011794:36094-36113 Msa1350700:three_prime_UTR 15.0%
!!! TGTTTATTATTTTGGTATAT+TGG + tig0011794:36102-36121 Msa1350700:three_prime_UTR 15.0%
!!! CTTTTTTGTTTTCTTTCTTT+TGG - tig0011794:26482-26501 None:intergenic 20.0%
!! CAAAAGAAAGAAAACAAAAA+AGG + tig0011794:26480-26499 Msa1350700:five_prime_UTR 20.0%
!! ACTAATTAAAAAAATGGACA+AGG + tig0011794:26622-26641 Msa1350700:exon 20.0%
!!! TTGAATTTTTACGTGTAATA+TGG + tig0011794:26801-26820 Msa1350700:intron 20.0%
!!! TTATGATTATTTTGATTGCA+GGG + tig0011794:26829-26848 Msa1350700:intron 20.0%
!! ATCAAATACAATATCATGTT+TGG - tig0011794:26894-26913 None:intergenic 20.0%
!! AAACATGATATTGTATTTGA+TGG + tig0011794:26893-26912 Msa1350700:CDS 20.0%
!! AACATGATATTGTATTTGAT+GGG + tig0011794:26894-26913 Msa1350700:CDS 20.0%
!! AAAACACAATGGAATAAAAA+AGG - tig0011794:27084-27103 None:intergenic 20.0%
!! AAAAGATAAGAAAAACACAA+TGG - tig0011794:27095-27114 None:intergenic 20.0%
!!! TTTTTAACAATGTTGTTGTT+TGG - tig0011794:27475-27494 None:intergenic 20.0%
!! TAAACAATTATACCGAAATT+CGG + tig0011794:27695-27714 Msa1350700:intron 20.0%
!!! TGTTTTTTCATTAATGAATG+TGG + tig0011794:27905-27924 Msa1350700:intron 20.0%
!!! GTTTTTTCATTAATGAATGT+GGG + tig0011794:27906-27925 Msa1350700:intron 20.0%
!!! AGTTATTTTCATACATACTT+TGG + tig0011794:27964-27983 Msa1350700:intron 20.0%
!! AGTATAAGACTATGTAAATT+CGG + tig0011794:28134-28153 Msa1350700:intron 20.0%
!! CTTTGATAAAAAGTTTAAAG+TGG + tig0011794:28514-28533 Msa1350700:intron 20.0%
!!! GACATTTATTTTAAAACAGA+TGG - tig0011794:28860-28879 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + tig0011794:29008-29027 Msa1350700:intron 20.0%
!!! TAAAGGGTTAAATATGTTTT+TGG + tig0011794:29198-29217 Msa1350700:intron 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG - tig0011794:29225-29244 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - tig0011794:29286-29305 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + tig0011794:29289-29308 Msa1350700:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + tig0011794:29568-29587 Msa1350700:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + tig0011794:29569-29588 Msa1350700:intron 20.0%
!!! AAATTTTCCATTTTCACTTT+TGG - tig0011794:29596-29615 None:intergenic 20.0%
!!! AAGTGAAAATGGAAAATTTT+TGG + tig0011794:29597-29616 Msa1350700:intron 20.0%
!!! TTTTGGGTTAAATATGTTTT+TGG - tig0011794:29687-29706 None:intergenic 20.0%
!!! TAATATGTTTTGAATAAGAG+GGG - tig0011794:30053-30072 None:intergenic 20.0%
!!! CTAATATGTTTTGAATAAGA+GGG - tig0011794:30054-30073 None:intergenic 20.0%
!!! TCTAATATGTTTTGAATAAG+AGG - tig0011794:30055-30074 None:intergenic 20.0%
!! TAATCTTGGAAATATTATTG+CGG + tig0011794:30175-30194 Msa1350700:intron 20.0%
!! TTACTAAAGACAATAAAGTA+AGG + tig0011794:30331-30350 Msa1350700:intron 20.0%
!!! AGTGTATATTTTAACATAAG+AGG + tig0011794:30615-30634 Msa1350700:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG + tig0011794:30616-30635 Msa1350700:intron 20.0%
!!! TGTATATTTTAACATAAGAG+GGG + tig0011794:30617-30636 Msa1350700:intron 20.0%
!! GTAGTTTACTCATAAAATAA+CGG + tig0011794:30679-30698 Msa1350700:intron 20.0%
!!! CTACTAATTTTAAGTTAGTT+CGG + tig0011794:30845-30864 Msa1350700:intron 20.0%
!!! TACTAATTTTAAGTTAGTTC+GGG + tig0011794:30846-30865 Msa1350700:intron 20.0%
!! AAAATTTCAAATGATACTCA+TGG + tig0011794:31112-31131 Msa1350700:intron 20.0%
!! AAATTTCAAATGATACTCAT+GGG + tig0011794:31113-31132 Msa1350700:intron 20.0%
!!! TTTTAGTCTCTAAAACTTTT+CGG - tig0011794:31170-31189 None:intergenic 20.0%
!! ATAAAAAAAAATGATCTAGG+AGG + tig0011794:31553-31572 Msa1350700:intron 20.0%
!! TAAAAAAAAATGATCTAGGA+GGG + tig0011794:31554-31573 Msa1350700:intron 20.0%
!!! GTGATTAAAATTTTGAAGTT+TGG + tig0011794:31588-31607 Msa1350700:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG - tig0011794:31893-31912 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG - tig0011794:31894-31913 None:intergenic 20.0%
!!! CTTAATAAATGGGTTTTTTT+AGG - tig0011794:32255-32274 None:intergenic 20.0%
!! CATTCTACTTTCTTAATAAA+TGG - tig0011794:32266-32285 None:intergenic 20.0%
!! TTGAAATAGTGACATTTAAT+AGG + tig0011794:32436-32455 Msa1350700:intron 20.0%
!!! AAAATGACACTTTTTAAACT+TGG + tig0011794:32618-32637 Msa1350700:intron 20.0%
!!! TTGTCATTTTTTTTATTAGG+GGG - tig0011794:32692-32711 None:intergenic 20.0%
!! GGTATATGATTAAAGTTTAA+GGG - tig0011794:33019-33038 None:intergenic 20.0%
!! TGGTATATGATTAAAGTTTA+AGG - tig0011794:33020-33039 None:intergenic 20.0%
!! GATTTAAACAAATAAGAAAG+TGG + tig0011794:33247-33266 Msa1350700:intron 20.0%
!! TTAATTGAATATACCAAGTT+TGG - tig0011794:33750-33769 None:intergenic 20.0%
!! TATAACAACAAACAAAAAAG+AGG - tig0011794:33816-33835 None:intergenic 20.0%
!!! TCTTTTTTGTTTGTTGTTAT+AGG + tig0011794:33815-33834 Msa1350700:intron 20.0%
!!! CTTTTTTGTTTGTTGTTATA+GGG + tig0011794:33816-33835 Msa1350700:intron 20.0%
!!! TGTAAGTTTTCTGTTTTTAT+AGG - tig0011794:34288-34307 None:intergenic 20.0%
!! AATTATGCTCAATTTATAGA+TGG - tig0011794:34695-34714 None:intergenic 20.0%
!! CAATGGAATAACTTTAATAA+TGG - tig0011794:34927-34946 None:intergenic 20.0%
!! TTATTAAAGTTATTCCATTG+TGG + tig0011794:34927-34946 Msa1350700:CDS 20.0%
!! TGATAGTTGCAATATTAATA+TGG + tig0011794:35071-35090 Msa1350700:CDS 20.0%
!!! CTTTGTAATAAAACTCATTT+TGG - tig0011794:35366-35385 None:intergenic 20.0%
!! GTTTCTGATAATATTAACAA+GGG + tig0011794:35517-35536 Msa1350700:CDS 20.0%
!!! GTAGTTATTTTTGAATTCTT+AGG + tig0011794:36124-36143 Msa1350700:three_prime_UTR 20.0%
!!! GCATTTTATTTAGATTAGTA+AGG + tig0011794:36195-36214 Msa1350700:three_prime_UTR 20.0%
! GATAAGATACCAATGATAAA+AGG - tig0011794:26737-26756 None:intergenic 25.0%
!!! GTTATGATTATTTTGATTGC+AGG + tig0011794:26828-26847 Msa1350700:intron 25.0%
!! TTTTATTGCAGATTCTTATC+TGG + tig0011794:27001-27020 Msa1350700:CDS 25.0%
! TTTATTGCAGATTCTTATCT+GGG + tig0011794:27002-27021 Msa1350700:CDS 25.0%
! AAAAGGAATTAAATCATACC+AGG - tig0011794:27067-27086 None:intergenic 25.0%
! GATTGCATTTAAGTCATTAT+AGG + tig0011794:27280-27299 Msa1350700:intron 25.0%
! AAGTCATTATAGGCATTTAT+CGG + tig0011794:27326-27345 Msa1350700:intron 25.0%
!! TTGGCCACATAAATTTTATT+AGG - tig0011794:27849-27868 None:intergenic 25.0%
!! AATGTGGGTTATAATATTCA+AGG + tig0011794:27921-27940 Msa1350700:intron 25.0%
! GTATAAGACTATGTAAATTC+GGG + tig0011794:28135-28154 Msa1350700:intron 25.0%
! AGATTATAAAATTTGGACCA+TGG + tig0011794:28166-28185 Msa1350700:intron 25.0%
! AATATGCTACACTTTATAGA+GGG - tig0011794:28199-28218 None:intergenic 25.0%
! AGCATATTCCATTAATCAAT+TGG + tig0011794:28211-28230 Msa1350700:intron 25.0%
! TAGATAGTCCAATTGATTAA+TGG - tig0011794:28222-28241 None:intergenic 25.0%
!!! GTTCTACGATTCTTTTTTTT+TGG + tig0011794:28677-28696 Msa1350700:intron 25.0%
!!! AAACGACACTAATTTTGAAA+CGG + tig0011794:29100-29119 Msa1350700:intron 25.0%
!!! TGGCCACATAATTTTTTTTT+AGG - tig0011794:29152-29171 None:intergenic 25.0%
! TAGTGTTCCCTAAAAAATAA+AGG + tig0011794:29181-29200 Msa1350700:intron 25.0%
! AGTGTTCCCTAAAAAATAAA+GGG + tig0011794:29182-29201 Msa1350700:intron 25.0%
!!! CGAAAAGTTGGTATATTTAT+AGG - tig0011794:29226-29245 None:intergenic 25.0%
!!! TGAAAATGGAAAATTTTTGG+AGG + tig0011794:29600-29619 Msa1350700:intron 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + tig0011794:29628-29647 Msa1350700:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + tig0011794:29629-29648 Msa1350700:intron 25.0%
! TAATAAAAAAACGTTCTCGT+GGG - tig0011794:29798-29817 None:intergenic 25.0%
! TTAATAAAAAAACGTTCTCG+TGG - tig0011794:29799-29818 None:intergenic 25.0%
! TGTAATTTAAGCTTCTCTTA+AGG - tig0011794:30092-30111 None:intergenic 25.0%
!!! AGTGTAGATTTTAACATAAG+TGG - tig0011794:30124-30143 None:intergenic 25.0%
! AATCTTGGAAATATTATTGC+GGG + tig0011794:30176-30195 Msa1350700:intron 25.0%
! TGTAATTCAAGCATCTTAAA+AGG + tig0011794:30557-30576 Msa1350700:intron 25.0%
! GTAATTCAAGCATCTTAAAA+GGG + tig0011794:30558-30577 Msa1350700:intron 25.0%
!!! TAAATTTTACTTTTCAAGGG+AGG + tig0011794:30590-30609 Msa1350700:intron 25.0%
!!! AAATTTTACTTTTCAAGGGA+GGG + tig0011794:30591-30610 Msa1350700:intron 25.0%
!!! TACTTTTAAGAGACAAAAAG+CGG - tig0011794:30804-30823 None:intergenic 25.0%
! CCAAATACTCATATTTAGTT+GGG - tig0011794:31263-31282 None:intergenic 25.0%
! ACCAAATACTCATATTTAGT+TGG - tig0011794:31264-31283 None:intergenic 25.0%
!! TTTTGTTAACAAGTGTCTTA+AGG + tig0011794:31411-31430 Msa1350700:intron 25.0%
! TTTGTTAACAAGTGTCTTAA+GGG + tig0011794:31412-31431 Msa1350700:intron 25.0%
! AAATGCTAACAAATGATCTT+AGG - tig0011794:31530-31549 None:intergenic 25.0%
! AAAAGGAGAGAATAAAGAAA+AGG + tig0011794:31695-31714 Msa1350700:intron 25.0%
! GTAAATGAGTGAAAAATCTT+TGG + tig0011794:32358-32377 Msa1350700:intron 25.0%
! AAATTGGATAAAGTTAACGA+GGG + tig0011794:32408-32427 Msa1350700:intron 25.0%
!!! TTGTTTTTTACATTTGAGAC+CGG + tig0011794:32509-32528 Msa1350700:intron 25.0%
! TAATTTAGTAATTACACACG+TGG - tig0011794:32794-32813 None:intergenic 25.0%
! GCAATAACCATAAAATTTGT+AGG + tig0011794:33053-33072 Msa1350700:intron 25.0%
!! GTCTATACCTACAAATTTTA+TGG - tig0011794:33063-33082 None:intergenic 25.0%
! CTTATTTGTTTAAATCAAGG+TGG - tig0011794:33243-33262 None:intergenic 25.0%
! GAATATTATATTCCTAGTTG+AGG - tig0011794:33674-33693 None:intergenic 25.0%
!! GATTATCTTTTCTATTCACT+TGG - tig0011794:34019-34038 None:intergenic 25.0%
! AAGATAATCCCAATAACAAA+AGG + tig0011794:34030-34049 Msa1350700:CDS 25.0%
! AGATAATCCCAATAACAAAA+GGG + tig0011794:34031-34050 Msa1350700:CDS 25.0%
!!! TTTTGGAAATATTCTTCAGT+TGG + tig0011794:34054-34073 Msa1350700:CDS 25.0%
!! TGTGTAATTTTCACATAAAG+AGG - tig0011794:34221-34240 None:intergenic 25.0%
!! TTTTTGTGATGGTAAAATTC+AGG - tig0011794:34329-34348 None:intergenic 25.0%
! ATATACCTTAGTTTATCAGT+TGG - tig0011794:34371-34390 None:intergenic 25.0%
!! TTTTCTCTTATAATAGAGAC+CGG + tig0011794:34484-34503 Msa1350700:intron 25.0%
! CTTAATCACATTCAAATTTG+TGG - tig0011794:34563-34582 None:intergenic 25.0%
! ATCACAATGTCTATTAACAT+TGG + tig0011794:34959-34978 Msa1350700:CDS 25.0%
!!! GTTTTTTAATTGTCTTCACT+TGG + tig0011794:35189-35208 Msa1350700:CDS 25.0%
! TATAATGCTCAATACTAAAG+AGG - tig0011794:35461-35480 None:intergenic 25.0%
! GGTTTCTGATAATATTAACA+AGG + tig0011794:35516-35535 Msa1350700:CDS 25.0%
! TCATTTCGACAAGTATTATT+GGG + tig0011794:35540-35559 Msa1350700:CDS 25.0%
! TGTATTATTTAGTATGCAGT+TGG + tig0011794:35593-35612 Msa1350700:CDS 25.0%
! GTATTATTTAGTATGCAGTT+GGG + tig0011794:35594-35613 Msa1350700:CDS 25.0%
! AGTTAACTGAATTCAAGAAT+GGG + tig0011794:35755-35774 Msa1350700:CDS 25.0%
!! TTTAACACCTCATCTTTTAT+TGG + tig0011794:35905-35924 Msa1350700:three_prime_UTR 25.0%
! ATTTCATCCAATAAAAGATG+AGG - tig0011794:35915-35934 None:intergenic 25.0%
! AAAATGAATTCCACATAAAG+TGG - tig0011794:35952-35971 None:intergenic 25.0%
! TCTAACACCACTTTATTATT+GGG - tig0011794:36002-36021 None:intergenic 25.0%
!!! TTCATAAATGAGAAGTGTTA+TGG - tig0011794:36044-36063 None:intergenic 25.0%
!!! AGGTTTCTAAGATTTTCTTA+TGG + tig0011794:36144-36163 Msa1350700:three_prime_UTR 25.0%
TGATGCTAATGAAGAAGAAA+TGG + tig0011794:26664-26683 Msa1350700:CDS 30.0%
! TTTCTTACATTTAAGATCGG+AGG - tig0011794:27192-27211 None:intergenic 30.0%
TAAAATTTATGTGGCCAAGT+CGG + tig0011794:27851-27870 Msa1350700:intron 30.0%
!!! ACTATCCCACCTTTTTTTTA+GGG - tig0011794:27886-27905 None:intergenic 30.0%
ATATGCTACACTTTATAGAG+GGG - tig0011794:28198-28217 None:intergenic 30.0%
GAATATGCTACACTTTATAG+AGG - tig0011794:28200-28219 None:intergenic 30.0%
CCATGCTAACAAATATCTTT+AGG - tig0011794:28658-28677 None:intergenic 30.0%
! CCTAAAGATATTTGTTAGCA+TGG + tig0011794:28655-28674 Msa1350700:intron 30.0%
AAAGTTTCTCCAAAAATCCT+AGG + tig0011794:28730-28749 Msa1350700:intron 30.0%
!! AATTTTACTTTTCAAGGGAG+GGG + tig0011794:30592-30611 Msa1350700:intron 30.0%
TGTAATTCAAGCATCTCTTA+GGG + tig0011794:30647-30666 Msa1350700:intron 30.0%
!! AGCGGAAGAAATATTTTAAG+AGG - tig0011794:30786-30805 None:intergenic 30.0%
CCCAACTAAATATGAGTATT+TGG + tig0011794:31260-31279 Msa1350700:intron 30.0%
! AATTTTCGTCAATCGACAAA+TGG - tig0011794:31330-31349 None:intergenic 30.0%
AATAGTTTACCCTTGTCTTT+CGG + tig0011794:31354-31373 Msa1350700:intron 30.0%
AGGTGATTATTGTGAACTTT+GGG + tig0011794:31637-31656 Msa1350700:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - tig0011794:32002-32021 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + tig0011794:31803-31822 Msa1350700:intron 30.0%
AGAATGTTTAATGAGTGCAT+CGG - tig0011794:32105-32124 None:intergenic 30.0%
AGTTTGTGGAATCAATGTAT+TGG - tig0011794:32171-32190 None:intergenic 30.0%
AAAATGTTAACTAGTGTCCT+GGG - tig0011794:32232-32251 None:intergenic 30.0%
!! TCTTTGGAAAGTGTTAAACA+TGG + tig0011794:32374-32393 Msa1350700:intron 30.0%
!! CTTTGGAAAGTGTTAAACAT+GGG + tig0011794:32375-32394 Msa1350700:intron 30.0%
CATGGGAATATGAAACAAAT+TGG + tig0011794:32392-32411 Msa1350700:intron 30.0%
CAAATTGGATAAAGTTAACG+AGG + tig0011794:32407-32426 Msa1350700:intron 30.0%
AAAAGGTCAATATTGCAAAG+GGG - tig0011794:32736-32755 None:intergenic 30.0%
CAAAAGGTCAATATTGCAAA+GGG - tig0011794:32737-32756 None:intergenic 30.0%
TTTAACAGTCACTCTCTTAT+TGG + tig0011794:33162-33181 Msa1350700:intron 30.0%
AAATAAGAAAGTGGGTGTTT+GGG + tig0011794:33256-33275 Msa1350700:intron 30.0%
! TATGAAAAAGAAGCACACAA+AGG + tig0011794:33712-33731 Msa1350700:intron 30.0%
ATTGAATATACCAAGTTTGG+TGG - tig0011794:33747-33766 None:intergenic 30.0%
TCCAATTGCTATCAGAATTA+AGG - tig0011794:33958-33977 None:intergenic 30.0%
ATTCTGATAGCAATTGGAAA+TGG + tig0011794:33960-33979 Msa1350700:CDS 30.0%
!!! ATTGCATGTTCTTTAGCTTT+TGG + tig0011794:33987-34006 Msa1350700:CDS 30.0%
!!! TCCAAAACCCTTTTGTTATT+GGG - tig0011794:34041-34060 None:intergenic 30.0%
!! TTCCAAAACCCTTTTGTTAT+TGG - tig0011794:34042-34061 None:intergenic 30.0%
GTATATATCCAAGATCATCT+TGG + tig0011794:34125-34144 Msa1350700:CDS 30.0%
! TAAAATTCAGGAGAGGTTTT+AGG - tig0011794:34317-34336 None:intergenic 30.0%
TTGTTCCAACTGATAAACTA+AGG + tig0011794:34363-34382 Msa1350700:CDS 30.0%
!!! TACCATCTTTTTAGCTTTTG+TGG + tig0011794:34406-34425 Msa1350700:intron 30.0%
AACCACAAAAGCTAAAAAGA+TGG - tig0011794:34411-34430 None:intergenic 30.0%
!!! TTTTTAGCTTTTGTGGTTCA+TGG + tig0011794:34413-34432 Msa1350700:intron 30.0%
ACACCTGATATATACTATTC+CGG - tig0011794:34506-34525 None:intergenic 30.0%
!! GATTAAGCACAATTTTTCAG+AGG + tig0011794:34576-34595 Msa1350700:intron 30.0%
TTGTGAAGATTGTCTAAACT+TGG + tig0011794:34741-34760 Msa1350700:intron 30.0%
ACAATGTCTATTAACATTGG+AGG + tig0011794:34962-34981 Msa1350700:CDS 30.0%
CTCTAGCATCAAAGATAAAA+GGG + tig0011794:35122-35141 Msa1350700:CDS 30.0%
CAAAGAAAAGAATGGGAATT+GGG + tig0011794:35164-35183 Msa1350700:CDS 30.0%
GGATATTTGAATGATACTCA+TGG + tig0011794:35262-35281 Msa1350700:CDS 30.0%
GCTGAAATGTTCAATGTTAT+TGG + tig0011794:35340-35359 Msa1350700:CDS 30.0%
GAAAATACTACTTCAAGTGA+AGG + tig0011794:35481-35500 Msa1350700:CDS 30.0%
GTCATTTCGACAAGTATTAT+TGG + tig0011794:35539-35558 Msa1350700:CDS 30.0%
AAGTATTATTGGGTTATAGC+TGG + tig0011794:35550-35569 Msa1350700:CDS 30.0%
! AAATCCACAAATTGATGACA+AGG + tig0011794:35702-35721 Msa1350700:CDS 30.0%
TAGTGATGAAACTAGTTCAA+AGG + tig0011794:35726-35745 Msa1350700:CDS 30.0%
GAGTTAACTGAATTCAAGAA+TGG + tig0011794:35754-35773 Msa1350700:CDS 30.0%
GTTAACTGAATTCAAGAATG+GGG + tig0011794:35756-35775 Msa1350700:CDS 30.0%
TTAACTGAATTCAAGAATGG+GGG + tig0011794:35757-35776 Msa1350700:CDS 30.0%
TATAGTTGGTCCAATTCATT+TGG + tig0011794:35850-35869 Msa1350700:three_prime_UTR 30.0%
TAGCATTTCTCCAAATGAAT+TGG - tig0011794:35863-35882 None:intergenic 30.0%
TTTATTGGATGAAATCTACG+TGG + tig0011794:35920-35939 Msa1350700:three_prime_UTR 30.0%
TGTTTCACCCAATAATAAAG+TGG + tig0011794:35992-36011 Msa1350700:three_prime_UTR 30.0%
CTCTAACACCACTTTATTAT+TGG - tig0011794:36003-36022 None:intergenic 30.0%
! TAATTTGCATCCACATTGCT+AGG + tig0011794:26523-26542 Msa1350700:five_prime_UTR 35.0%
TTCTATCTATCTTCTGCATC+AGG + tig0011794:26586-26605 Msa1350700:five_prime_UTR 35.0%
ACAACAACCACAAAGAAGAA+AGG + tig0011794:26694-26713 Msa1350700:CDS 35.0%
CAACAACCACAAAGAAGAAA+GGG + tig0011794:26695-26714 Msa1350700:CDS 35.0%
GATACCAATGATAAAAGGCA+TGG - tig0011794:26732-26751 None:intergenic 35.0%
!!! TATTTTGATTGCAGGGAATG+AGG + tig0011794:26836-26855 Msa1350700:intron 35.0%
ACGCGCGCAATTTAAATTAA+AGG - tig0011794:27602-27621 None:intergenic 35.0%
CATAGGGTTCCCTAAAAAAA+AGG + tig0011794:27874-27893 Msa1350700:intron 35.0%
!!! CACTATCCCACCTTTTTTTT+AGG - tig0011794:27887-27906 None:intergenic 35.0%
! TGAATTCTTTTCGCCGTTTA+TGG - tig0011794:28256-28275 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - tig0011794:28966-28985 None:intergenic 35.0%
!!! GACACTAATTTTGAAACGGA+AGG + tig0011794:29104-29123 Msa1350700:intron 35.0%
TTTGGAGGACTAAAAGTTGA+AGG + tig0011794:29615-29634 Msa1350700:intron 35.0%
GTAATTCAAGCATCTTTGAG+AGG - tig0011794:29992-30011 None:intergenic 35.0%
!! TATGTTTTGAATAAGAGGGG+AGG - tig0011794:30050-30069 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+TGG + tig0011794:30622-30641 Msa1350700:intron 35.0%
GTGTAATTCAAGCATCTCTT+AGG + tig0011794:30646-30665 Msa1350700:intron 35.0%
! TGAAGTTTGGAACGAATAGA+AGG + tig0011794:31601-31620 Msa1350700:intron 35.0%
CAGGTGATTATTGTGAACTT+TGG + tig0011794:31636-31655 Msa1350700:intron 35.0%
AATGTTAACCAATGCTCTAG+AGG + tig0011794:31719-31738 Msa1350700:intron 35.0%
AAATTGTGTGAGAGAAGAGT+TGG + tig0011794:31932-31951 Msa1350700:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + tig0011794:32038-32057 Msa1350700:intron 35.0%
GAAAATGTTAACTAGTGTCC+TGG - tig0011794:32233-32252 None:intergenic 35.0%
!!! TTTTTTACATTTGAGACCGG+AGG + tig0011794:32512-32531 Msa1350700:intron 35.0%
!! TTTTTACATTTGAGACCGGA+GGG + tig0011794:32513-32532 Msa1350700:intron 35.0%
TCGCAACATTGACAAACTTA+GGG - tig0011794:32663-32682 None:intergenic 35.0%
ATCGCAACATTGACAAACTT+AGG - tig0011794:32664-32683 None:intergenic 35.0%
! GTTTGTCAATGTTGCGATTT+TGG + tig0011794:32666-32685 Msa1350700:intron 35.0%
CCAAAAGGTCAATATTGCAA+AGG - tig0011794:32738-32757 None:intergenic 35.0%
! CCTTTGCAATATTGACCTTT+TGG + tig0011794:32735-32754 Msa1350700:intron 35.0%
ACTCGGTCAAATTAACCAAA+AGG - tig0011794:32753-32772 None:intergenic 35.0%
!! TTATTGCTAAAAGCGTCTGT+TGG - tig0011794:33040-33059 None:intergenic 35.0%
TAGGTATAGGAGGAATTCTA+AGG + tig0011794:33119-33138 Msa1350700:intron 35.0%
TGGGTCTCACTTAAAATAGT+GGG - tig0011794:33205-33224 None:intergenic 35.0%
ATGGGTCTCACTTAAAATAG+TGG - tig0011794:33206-33225 None:intergenic 35.0%
GTGGTTCTCACATTGAAAAT+GGG - tig0011794:33224-33243 None:intergenic 35.0%
CAAATAAGAAAGTGGGTGTT+TGG + tig0011794:33255-33274 Msa1350700:intron 35.0%
! CTTTGATCATGGATTGATTG+AGG - tig0011794:33403-33422 None:intergenic 35.0%
CATAAGCTAGCACTATTCAT+TGG + tig0011794:33461-33480 Msa1350700:intron 35.0%
AGGAAGATTCATAGATGAAG+GGG - tig0011794:33654-33673 None:intergenic 35.0%
GAGGAAGATTCATAGATGAA+GGG - tig0011794:33655-33674 None:intergenic 35.0%
TGAGGAAGATTCATAGATGA+AGG - tig0011794:33656-33675 None:intergenic 35.0%
TCTATGAATCTTCCTCAACT+AGG + tig0011794:33659-33678 Msa1350700:intron 35.0%
GAAAAATGTTCCACCAAACT+TGG + tig0011794:33734-33753 Msa1350700:intron 35.0%
AATAACATTGCCAATTGACC+TGG - tig0011794:33930-33949 None:intergenic 35.0%
GCCTTAATTCTGATAGCAAT+TGG + tig0011794:33954-33973 Msa1350700:CDS 35.0%
! TCCCAATAACAAAAGGGTTT+TGG + tig0011794:34037-34056 Msa1350700:CDS 35.0%
ATATCCAAGATCATCTTGGT+TGG + tig0011794:34129-34148 Msa1350700:CDS 35.0%
AGACCGGAATAGTATATATC+AGG + tig0011794:34500-34519 Msa1350700:intron 35.0%
GTTGAACAAAGTTATGTTGC+TGG + tig0011794:34636-34655 Msa1350700:intron 35.0%
ATTTATTGCTGAACCATCTG+AGG - tig0011794:34861-34880 None:intergenic 35.0%
ATGGTTCAGCAATAAATCGT+TGG + tig0011794:34864-34883 Msa1350700:CDS 35.0%
AGTTATTCCATTGTGGTCAA+CGG + tig0011794:34934-34953 Msa1350700:CDS 35.0%
ATTAACATTGGAGGCTCATT+TGG + tig0011794:34971-34990 Msa1350700:CDS 35.0%
TGAAGTGATATGTCTGTCTA+AGG - tig0011794:35014-35033 None:intergenic 35.0%
ATAACAGAATAAGATCCTGC+TGG - tig0011794:35049-35068 None:intergenic 35.0%
! CCTTTTATCTTTGATGCTAG+AGG - tig0011794:35124-35143 None:intergenic 35.0%
CCTCTAGCATCAAAGATAAA+AGG + tig0011794:35121-35140 Msa1350700:CDS 35.0%
TTTCTTTGGACCGATACTTA+CGG - tig0011794:35152-35171 None:intergenic 35.0%
TATCGGTCCAAAGAAAAGAA+TGG + tig0011794:35156-35175 Msa1350700:CDS 35.0%
ATCGGTCCAAAGAAAAGAAT+GGG + tig0011794:35157-35176 Msa1350700:CDS 35.0%
! CCAATTCCCATTCTTTTCTT+TGG - tig0011794:35166-35185 None:intergenic 35.0%
CCAAAGAAAAGAATGGGAAT+TGG + tig0011794:35163-35182 Msa1350700:CDS 35.0%
!!! CAGCAATTTTTGAGACTGTA+AGG + tig0011794:35218-35237 Msa1350700:CDS 35.0%
!!! TTTTGAGACTGTAAGGAGAA+AGG + tig0011794:35225-35244 Msa1350700:CDS 35.0%
AGAAAGGAAGCAATCAAAGA+AGG + tig0011794:35241-35260 Msa1350700:CDS 35.0%
TGTTGAAAATGTCTGCAATG+TGG + tig0011794:35287-35306 Msa1350700:CDS 35.0%
CAAAGAGTTTCCAAAGAGTA+TGG + tig0011794:35381-35400 Msa1350700:CDS 35.0%
ACTTCAAGTGAAGGAAATGA+AGG + tig0011794:35490-35509 Msa1350700:CDS 35.0%
AAGTGAAGGAAATGAAGGAT+GGG + tig0011794:35495-35514 Msa1350700:CDS 35.0%
TTGGATACTTCATCAACTGT+AGG - tig0011794:35628-35647 None:intergenic 35.0%
TCCAATGTGAGTGAAGAAAA+TGG + tig0011794:35643-35662 Msa1350700:CDS 35.0%
! ACCATTTTCTTCACTCACAT+TGG - tig0011794:35647-35666 None:intergenic 35.0%
CTAACCTTGTCATCAATTTG+TGG - tig0011794:35709-35728 None:intergenic 35.0%
TAGTGAAGAAAGTGACTTGA+AGG + tig0011794:35804-35823 Msa1350700:CDS 35.0%
! TGGAATTCATTTTCAAAGCG+AGG + tig0011794:35959-35978 Msa1350700:three_prime_UTR 35.0%
! GGAATTCATTTTCAAAGCGA+GGG + tig0011794:35960-35979 Msa1350700:three_prime_UTR 35.0%
ATCCATGTCTCATAATCTCA+AGG - tig0011794:36171-36190 None:intergenic 35.0%
! CTTTTGGTACAGAAAGCTAG+TGG - tig0011794:26466-26485 None:intergenic 40.0%
! GTCACCATGCCTTTTATCAT+TGG + tig0011794:26725-26744 Msa1350700:CDS 40.0%
! ACTTGCTAAGATGGCAAGTT+TGG + tig0011794:26860-26879 Msa1350700:CDS 40.0%
CTTGCTAAGATGGCAAGTTT+GGG + tig0011794:26861-26880 Msa1350700:CDS 40.0%
GTATCTGAGTAGATATGCCA+AGG - tig0011794:26935-26954 None:intergenic 40.0%
AAGAACCTAATCCAACACCT+AGG - tig0011794:27034-27053 None:intergenic 40.0%
AGGTTCTTCTATCAGTTTCC+TGG + tig0011794:27046-27065 Msa1350700:CDS 40.0%
! TTGTCGCTTCTACCGAATTT+CGG - tig0011794:27710-27729 None:intergenic 40.0%
GAGCATGCTCATTTGTAAGA+GGG - tig0011794:27787-27806 None:intergenic 40.0%
TGAGCATGCTCATTTGTAAG+AGG - tig0011794:27788-27807 None:intergenic 40.0%
AAATGAGCATGCTCATACTG+AGG + tig0011794:27793-27812 Msa1350700:intron 40.0%
AGGGTTCCCTAAAAAAAAGG+TGG + tig0011794:27877-27896 Msa1350700:intron 40.0%
GGGTTCCCTAAAAAAAAGGT+GGG + tig0011794:27878-27897 Msa1350700:intron 40.0%
ATACTTTGGTATGTATGCGC+TGG + tig0011794:27978-27997 Msa1350700:intron 40.0%
TAAAATTTGGACCATGGCAG+TGG + tig0011794:28172-28191 Msa1350700:intron 40.0%
TCACTAGTATCTCTACTTGG+AGG - tig0011794:28823-28842 None:intergenic 40.0%
TGCTCACTAGTATCTCTACT+TGG - tig0011794:28826-28845 None:intergenic 40.0%
GAGGGACTAAAACGAAAAGT+TGG - tig0011794:29647-29666 None:intergenic 40.0%
AGAGGGACCAAAAGTGAAAA+TGG + tig0011794:29586-29605 Msa1350700:intron 40.0%
CGAATATGAGTGTGTATGAG+CGG + tig0011794:29843-29862 Msa1350700:intron 40.0%
GAATATGAGTGTGTATGAGC+GGG + tig0011794:29844-29863 Msa1350700:intron 40.0%
TCAAGCATCTTAAAAGGGAG+AGG + tig0011794:30563-30582 Msa1350700:intron 40.0%
ATTCAAGCATCTCTTAGGGA+AGG + tig0011794:30651-30670 Msa1350700:intron 40.0%
TTCAAGCATCTCTTAGGGAA+GGG + tig0011794:30652-30671 Msa1350700:intron 40.0%
CGGTGGCTTCAAACAAAAAT+TGG + tig0011794:31374-31393 Msa1350700:intron 40.0%
AACTCGTTAACAAGACCTCA+GGG + tig0011794:31742-31761 Msa1350700:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - tig0011794:32042-32061 None:intergenic 40.0%
!!! ATGAGTGTCGTTTTAGGCTT+TGG + tig0011794:31809-31828 Msa1350700:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + tig0011794:32042-32061 Msa1350700:intron 40.0%
AGTATGTCTTATACTCCCTC+CGG - tig0011794:32531-32550 None:intergenic 40.0%
TGCAAAGGGGCTAAATCTTA+GGG - tig0011794:32723-32742 None:intergenic 40.0%
TTGCAAAGGGGCTAAATCTT+AGG - tig0011794:32724-32743 None:intergenic 40.0%
ATTACTTTGTGGACGAATCC+TGG - tig0011794:32944-32963 None:intergenic 40.0%
GGTGGTTCTCACATTGAAAA+TGG - tig0011794:33225-33244 None:intergenic 40.0%
AATCCATGATCAAAGCCTCT+TGG + tig0011794:33408-33427 Msa1350700:intron 40.0%
TTCAAATCAGTGTTGCCAAG+AGG - tig0011794:33426-33445 None:intergenic 40.0%
! CTTTGGTCATGGATTGATTG+AGG - tig0011794:33582-33601 None:intergenic 40.0%
TTCAAATCAGTGTTGCCAAG+AGG - tig0011794:33426-33445 None:intergenic 40.0%
CTGATAGCAATTGGAAATGG+TGG + tig0011794:33963-33982 Msa1350700:CDS 40.0%
CTTTCCAACCAAGATGATCT+TGG - tig0011794:34136-34155 None:intergenic 40.0%
GATCATCTTGGTTGGAAAGT+TGG + tig0011794:34137-34156 Msa1350700:CDS 40.0%
!! CTTGGTTGGAAAGTTGGTTT+TGG + tig0011794:34143-34162 Msa1350700:CDS 40.0%
!!! AATTCAGGAGAGGTTTTAGG+TGG - tig0011794:34314-34333 None:intergenic 40.0%
GTGATGGTAAAATTCAGGAG+AGG - tig0011794:34324-34343 None:intergenic 40.0%
!!! GGTCTGAGTCTTTTTTGTGA+TGG - tig0011794:34340-34359 None:intergenic 40.0%
GTTTATCAGTTGGAACAACG+AGG - tig0011794:34361-34380 None:intergenic 40.0%
GGTTAATGAGTTTCGACACA+TGG + tig0011794:34657-34676 Msa1350700:intron 40.0%
AACGTCGTAAACGGTTAACA+AGG - tig0011794:34720-34739 None:intergenic 40.0%
CTTCACAACAACGTCGTAAA+CGG - tig0011794:34729-34748 None:intergenic 40.0%
GAACAAGATATAGCCTCAGA+TGG + tig0011794:34845-34864 Msa1350700:CDS 40.0%
GTTATTCCATTGTGGTCAAC+GGG + tig0011794:34935-34954 Msa1350700:CDS 40.0%
TTCTTTGGACCGATACTTAC+GGG - tig0011794:35151-35170 None:intergenic 40.0%
ATACCAGCCAAACAAAGTTG+AGG - tig0011794:35319-35338 None:intergenic 40.0%
CAAGTGAAGGAAATGAAGGA+TGG + tig0011794:35494-35513 Msa1350700:CDS 40.0%
TTAGTATGCAGTTGGGCTTA+TGG + tig0011794:35601-35620 Msa1350700:CDS 40.0%
GAGTGAAGAAAATGGTTCCA+AGG + tig0011794:35651-35670 Msa1350700:CDS 40.0%
TGAAGAAAATGGTTCCAAGG+AGG + tig0011794:35654-35673 Msa1350700:CDS 40.0%
TTCAGTTGAATGTTCCTCCT+TGG - tig0011794:35671-35690 None:intergenic 40.0%
TCTTGAATGCTTTCTCAACC+TGG - tig0011794:35783-35802 None:intergenic 40.0%
TGAAGAAAGTGACTTGAAGG+AGG + tig0011794:35807-35826 Msa1350700:CDS 40.0%
AGGAGGAAGATTTGTGATAG+AGG + tig0011794:35824-35843 Msa1350700:exon 40.0%
GGAGGAAGATTTGTGATAGA+GGG + tig0011794:35825-35844 Msa1350700:exon 40.0%
TGTGATAGAGGGCTTATAGT+TGG + tig0011794:35836-35855 Msa1350700:exon 40.0%
GACCTTGAGATTATGAGACA+TGG + tig0011794:36166-36185 Msa1350700:three_prime_UTR 40.0%
CAACCACAAAGAAGAAAGGG+TGG + tig0011794:26698-26717 Msa1350700:CDS 45.0%
AGACCACCCTTTCTTCTTTG+TGG - tig0011794:26704-26723 None:intergenic 45.0%
! GAATGAGGCACTTGCTAAGA+TGG + tig0011794:26851-26870 Msa1350700:CDS 45.0%
GGATCATACAGACTTCACCT+TGG + tig0011794:26915-26934 Msa1350700:CDS 45.0%
TGTGAAATTGCTAGCTGCAG+AGG - tig0011794:26967-26986 None:intergenic 45.0%
AGCTAGCAATTTCACACCTG+TGG + tig0011794:26971-26990 Msa1350700:CDS 45.0%
AGCAATTTCACACCTGTGGT+TGG + tig0011794:26975-26994 Msa1350700:CDS 45.0%
!! GCAATAAAAGCACCAACCAC+AGG - tig0011794:26990-27009 None:intergenic 45.0%
TCTTATCTGGGTCGTTTCCT+AGG + tig0011794:27014-27033 Msa1350700:CDS 45.0%
!! CGTTTCCTAGGTGTTGGATT+AGG + tig0011794:27026-27045 Msa1350700:CDS 45.0%
GAGATGGAAAGGAATGGTTC+TGG - tig0011794:27355-27374 None:intergenic 45.0%
TAGCAGGAGATGGAAAGGAA+TGG - tig0011794:27361-27380 None:intergenic 45.0%
CATGATACCTTGACAGTAGC+AGG - tig0011794:27377-27396 None:intergenic 45.0%
AGTTGAACGTTGTCTCGCAT+GGG - tig0011794:27412-27431 None:intergenic 45.0%
AAGTTGAACGTTGTCTCGCA+TGG - tig0011794:27413-27432 None:intergenic 45.0%
TGCTCATTTGTAAGAGGGTG+AGG - tig0011794:27782-27801 None:intergenic 45.0%
! TTTGGTATGTATGCGCTGGT+AGG + tig0011794:27982-28001 Msa1350700:intron 45.0%
GGTGGAAAACAAAGTCGTGT+GGG - tig0011794:28374-28393 None:intergenic 45.0%
TGGTGGAAAACAAAGTCGTG+TGG - tig0011794:28375-28394 None:intergenic 45.0%
!!! ACACGACTTTGTTTTCCACC+AGG + tig0011794:28374-28393 Msa1350700:intron 45.0%
!!! CACGACTTTGTTTTCCACCA+GGG + tig0011794:28375-28394 Msa1350700:intron 45.0%
! AACAATCTGAAATTGCGCCC+TGG - tig0011794:28395-28414 None:intergenic 45.0%
TGGATAGTGATGCCACATAC+AGG + tig0011794:28448-28467 Msa1350700:intron 45.0%
!! AGGGAACACTATGCTGACTT+TGG - tig0011794:29172-29191 None:intergenic 45.0%
TCAAGCATCTCTTAGGGAAG+GGG + tig0011794:30653-30672 Msa1350700:intron 45.0%
AACTAATGCTCACGAGACAC+TGG - tig0011794:30714-30733 None:intergenic 45.0%
AGTTTACCCTTGTCTTTCGG+TGG + tig0011794:31357-31376 Msa1350700:intron 45.0%
TTGAAGCCACCGAAAGACAA+GGG - tig0011794:31366-31385 None:intergenic 45.0%
! TTTGAAGCCACCGAAAGACA+AGG - tig0011794:31367-31386 None:intergenic 45.0%
!! AACGAGTTCCTCTAGAGCAT+TGG - tig0011794:31730-31749 None:intergenic 45.0%
GAACTCGTTAACAAGACCTC+AGG + tig0011794:31741-31760 Msa1350700:intron 45.0%
ACTCGTTAACAAGACCTCAG+GGG + tig0011794:31743-31762 Msa1350700:intron 45.0%
ATGCTTAAATAGTGCCCCTG+AGG - tig0011794:31760-31779 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - tig0011794:32041-32060 None:intergenic 45.0%
TGTGAGAGAAGAGTTGGAGA+GGG + tig0011794:31938-31957 Msa1350700:intron 45.0%
AGAGTTGGAGAGGGTAAAGT+TGG + tig0011794:31947-31966 Msa1350700:intron 45.0%
AAGGTCTTTAACTAGTGCCC+AGG + tig0011794:32212-32231 Msa1350700:intron 45.0%
GCAAAGGGGCTAAATCTTAG+GGG - tig0011794:32722-32741 None:intergenic 45.0%
CTTCAACACCCACAAAATCC+AGG + tig0011794:32923-32942 Msa1350700:intron 45.0%
! GGACGAATCCTGGATTTTGT+GGG - tig0011794:32934-32953 None:intergenic 45.0%
! TGGACGAATCCTGGATTTTG+TGG - tig0011794:32935-32954 None:intergenic 45.0%
TCCTCCTATACCTATACCCA+CGG - tig0011794:33113-33132 None:intergenic 45.0%
GCATAGACGTTTAGTGCATC+AGG + tig0011794:33304-33323 Msa1350700:intron 45.0%
! TTGCCAAGAGGCTTTGATCA+TGG - tig0011794:33414-33433 None:intergenic 45.0%
AATCCATGACCAAAGCCTCT+TGG + tig0011794:33587-33606 Msa1350700:intron 45.0%
TATAGGGAATGTCACTGCTG+TGG + tig0011794:33832-33851 Msa1350700:intron 45.0%
ATTCACAGCCTTCAGATGGA+TGG - tig0011794:33899-33918 None:intergenic 45.0%
ATCAGCAACACCAGGTCAAT+TGG + tig0011794:33917-33936 Msa1350700:CDS 45.0%
GCTGTCATAATAGCTCTCAC+TGG + tig0011794:34098-34117 Msa1350700:CDS 45.0%
! GATAAAAGCATGAGTGCTGC+TGG - tig0011794:34173-34192 None:intergenic 45.0%
TTTGTTCAACACGAGCTTGC+AGG - tig0011794:34626-34645 None:intergenic 45.0%
! TCACACTTTCAAGTACCAGC+AGG + tig0011794:35031-35050 Msa1350700:CDS 45.0%
AAAGGGAAGCCCGTAAGTAT+CGG + tig0011794:35139-35158 Msa1350700:CDS 45.0%
GCTTGCACCTCAACTTTGTT+TGG + tig0011794:35309-35328 Msa1350700:CDS 45.0%
GCAACACTAGCCATACTCTT+TGG - tig0011794:35394-35413 None:intergenic 45.0%
! TTCCCTTTCTGGATTGGGAA+TGG + tig0011794:35417-35436 Msa1350700:CDS 45.0%
! TCCCTTTCTGGATTGGGAAT+GGG + tig0011794:35418-35437 Msa1350700:CDS 45.0%
ACCCATTCCCAATCCAGAAA+GGG - tig0011794:35422-35441 None:intergenic 45.0%
GTGGAACTCACCACTTTATG+TGG + tig0011794:35939-35958 Msa1350700:three_prime_UTR 45.0%
!! TAAAATAAATTAAAAATTGT+AGG + tig0011794:28061-28080 Msa1350700:intron 5.0%
!!! ATTAAATTTTATTTAAACAA+TGG + tig0011794:28428-28447 Msa1350700:intron 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG - tig0011794:29392-29411 None:intergenic 5.0%
!!! ATGAATTTTTATATATTTTA+TGG - tig0011794:29445-29464 None:intergenic 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG + tig0011794:29483-29502 Msa1350700:intron 5.0%
!!! AAAAAATTCTAAATTTTTTT+GGG + tig0011794:29484-29503 Msa1350700:intron 5.0%
!!! TTTTTTTATTAAATAAATGT+GGG + tig0011794:29807-29826 Msa1350700:intron 5.0%
!!! ACATATTTTAATTTTATTTT+GGG - tig0011794:30305-30324 None:intergenic 5.0%
!!! ATGAATTTATTTTTATTAAA+TGG + tig0011794:30444-30463 Msa1350700:intron 5.0%
!!! AAAATTTTTGAATATTTATA+AGG + tig0011794:31220-31239 Msa1350700:intron 5.0%
!! CATAAAAAAATTATTATTTA+AGG + tig0011794:32193-32212 Msa1350700:intron 5.0%
!! AAAAAACAATAAAAAAAAAT+TGG - tig0011794:32498-32517 None:intergenic 5.0%
!! ATTGAAAAAAAAAATAAAAA+AGG + tig0011794:32869-32888 Msa1350700:intron 5.0%
GTAGCTAGCACCTAGCAATG+TGG - tig0011794:26536-26555 None:intergenic 50.0%
GACAGTAGCAGGAGATGGAA+AGG - tig0011794:27366-27385 None:intergenic 50.0%
TCCATCTCCTGCTACTGTCA+AGG + tig0011794:27367-27386 Msa1350700:intron 50.0%
ACCTTGACAGTAGCAGGAGA+TGG - tig0011794:27371-27390 None:intergenic 50.0%
GGTAGAAGCGACAACTCAGT+AGG + tig0011794:27716-27735 Msa1350700:intron 50.0%
AGGCCCTTGGAAAAGTCCTA+CGG + tig0011794:27736-27755 Msa1350700:intron 50.0%
! GGACCGTAGGACTTTTCCAA+GGG - tig0011794:27742-27761 None:intergenic 50.0%
CTTGGAAAAGTCCTACGGTC+CGG + tig0011794:27741-27760 Msa1350700:intron 50.0%
TTTGTAAGAGGGTGAGGCTC+AGG - tig0011794:27776-27795 None:intergenic 50.0%
TTATGTGGCCAAGTCGGCAT+AGG + tig0011794:27857-27876 Msa1350700:intron 50.0%
TATGTGGCCAAGTCGGCATA+GGG + tig0011794:27858-27877 Msa1350700:intron 50.0%
GCAACTCAACGTACACCATG+TGG + tig0011794:28091-28110 Msa1350700:intron 50.0%
ACTCAACGTACACCATGTGG+AGG + tig0011794:28094-28113 Msa1350700:intron 50.0%
! AATCTGAAATTGCGCCCTGG+TGG - tig0011794:28392-28411 None:intergenic 50.0%
!! CGCTGGCTACCTAGGATTTT+TGG - tig0011794:28742-28761 None:intergenic 50.0%
GTGTGAGAGAAGAGTTGGAG+AGG + tig0011794:31937-31956 Msa1350700:intron 50.0%
!! ATGCCACTTAGGCGTTGACT+CGG - tig0011794:32770-32789 None:intergenic 50.0%
! ACCTATACCCACGGCTTGTT+CGG - tig0011794:33104-33123 None:intergenic 50.0%
CAAGCCGTGGGTATAGGTAT+AGG + tig0011794:33106-33125 Msa1350700:intron 50.0%
! TTGCCAAGAGGCTTTGGTCA+TGG - tig0011794:33593-33612 None:intergenic 50.0%
TCAGTGTTGCCAAGAGGCTT+TGG - tig0011794:33420-33439 None:intergenic 50.0%
GTTAACAGCCATGATCCCGT+CGG + tig0011794:33854-33873 Msa1350700:CDS 50.0%
TCAGATGGATGGATGCAAGC+AGG - tig0011794:33888-33907 None:intergenic 50.0%
GCTTGCATCCATCCATCTGA+AGG + tig0011794:33888-33907 Msa1350700:CDS 50.0%
! GCTGATTCACAGCCTTCAGA+TGG - tig0011794:33903-33922 None:intergenic 50.0%
! CAAAGAACCAGCTTGCTCAC+TGG + tig0011794:34239-34258 Msa1350700:CDS 50.0%
TGCAAAACCAGTGAGCAAGC+TGG - tig0011794:34249-34268 None:intergenic 50.0%
GTGATTCCCGTTGACCACAA+TGG - tig0011794:34944-34963 None:intergenic 50.0%
! GCACCTCAACTTTGTTTGGC+TGG + tig0011794:35313-35332 Msa1350700:CDS 50.0%
! AGTGTTGCTGCTTCCCTTTC+TGG + tig0011794:35406-35425 Msa1350700:CDS 50.0%
! TGCTGCTTCCCTTTCTGGAT+TGG + tig0011794:35411-35430 Msa1350700:CDS 50.0%
GCTGCTTCCCTTTCTGGATT+GGG + tig0011794:35412-35431 Msa1350700:CDS 50.0%
CACCCATTCCCAATCCAGAA+AGG - tig0011794:35423-35442 None:intergenic 50.0%
! TTCTGGATTGGGAATGGGTG+TGG + tig0011794:35423-35442 Msa1350700:CDS 50.0%
! TCTGGATTGGGAATGGGTGT+GGG + tig0011794:35424-35443 Msa1350700:CDS 50.0%
TGAATTCAAGAATGGGGGCC+AGG + tig0011794:35762-35781 Msa1350700:CDS 50.0%
CTGGGTCGTTTCCTAGGTGT+TGG + tig0011794:27020-27039 Msa1350700:CDS 55.0%
! CGGACCGTAGGACTTTTCCA+AGG - tig0011794:27743-27762 None:intergenic 55.0%
! TAGGGAACCCTATGCCGACT+TGG - tig0011794:27868-27887 None:intergenic 55.0%
CAACGTACACCATGTGGAGG+TGG + tig0011794:28097-28116 Msa1350700:intron 55.0%
TGCTATACGCCACCTCCACA+TGG - tig0011794:28109-28128 None:intergenic 55.0%
TTATAGAGGGGCCACTGCCA+TGG - tig0011794:28186-28205 None:intergenic 55.0%
CGAAGCACACGACCTGTATG+TGG - tig0011794:28463-28482 None:intergenic 55.0%
GCAGTTCAACTCAAGCCTCG+AGG - tig0011794:28778-28797 None:intergenic 55.0%
TCTCGTGGGCTTAGCTCAGT+CGG - tig0011794:29784-29803 None:intergenic 55.0%
TGACCGAGTCAACGCCTAAG+TGG + tig0011794:32764-32783 Msa1350700:intron 55.0%
! ACACACGTGGCATGCCACTT+AGG - tig0011794:32781-32800 None:intergenic 55.0%
!! ACGGCTTGTTCGGTGTCTGT+AGG - tig0011794:33094-33113 None:intergenic 55.0%
TACAGACACCGAACAAGCCG+TGG + tig0011794:33093-33112 Msa1350700:intron 55.0%
ACAGACACCGAACAAGCCGT+GGG + tig0011794:33094-33113 Msa1350700:intron 55.0%
ACCGAACAAGCCGTGGGTAT+AGG + tig0011794:33100-33119 Msa1350700:intron 55.0%
GCCGTGGGTATAGGTATAGG+AGG + tig0011794:33109-33128 Msa1350700:intron 55.0%
GATGGATGGATGCAAGCAGG+AGG - tig0011794:33885-33904 None:intergenic 55.0%
GGCTGTGAATCAGCAACACC+AGG + tig0011794:33909-33928 Msa1350700:CDS 55.0%
GGGAATGGGTGTGGGAAACT+TGG + tig0011794:35432-35451 Msa1350700:CDS 55.0%
GCGACAACTCAGTAGGCCCT+TGG + tig0011794:27723-27742 Msa1350700:intron 60.0%
GTAAGAGGGTGAGGCTCAGG+AGG - tig0011794:27773-27792 None:intergenic 60.0%
! GTGGAGAACGCTGGCTACCT+AGG - tig0011794:28750-28769 None:intergenic 60.0%
GAGGTTCACGTGGAGAACGC+TGG - tig0011794:28759-28778 None:intergenic 60.0%
CGTTCTCCACGTGAACCTCG+AGG + tig0011794:28760-28779 Msa1350700:intron 60.0%
CTCAAGCCTCGAGGTTCACG+TGG - tig0011794:28769-28788 None:intergenic 60.0%
CAGCCATGATCCCGTCGGCA+CGG + tig0011794:33859-33878 Msa1350700:CDS 65.0%
GAGGCTCAGGAGGAGCAGGC+CGG - tig0011794:27763-27782 None:intergenic 70.0%
GGGTGAGGCTCAGGAGGAGC+AGG - tig0011794:27767-27786 None:intergenic 70.0%
! AGGCCGTGCCGACGGGATCA+TGG - tig0011794:33865-33884 None:intergenic 70.0%
! AAGCAGGAGGCCGTGCCGAC+GGG - tig0011794:33872-33891 None:intergenic 70.0%
CAAGCAGGAGGCCGTGCCGA+CGG - tig0011794:33873-33892 None:intergenic 70.0%
GGAGGAGCAGGCCGGACCGT+AGG - tig0011794:27755-27774 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0011794 gene 26434 36243 26434 ID=Msa1350700;Name=Msa1350700
tig0011794 mRNA 26434 36243 26434 ID=Msa1350700-mRNA-1;Parent=Msa1350700;Name=Msa1350700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=201|1|1|1|1|1|4|403|635
tig0011794 exon 26434 26746 26434 ID=Msa1350700-mRNA-1:exon:7512;Parent=Msa1350700-mRNA-1
tig0011794 exon 26850 27067 26850 ID=Msa1350700-mRNA-1:exon:7513;Parent=Msa1350700-mRNA-1
tig0011794 exon 33837 34384 33837 ID=Msa1350700-mRNA-1:exon:7514;Parent=Msa1350700-mRNA-1
tig0011794 exon 34811 36243 34811 ID=Msa1350700-mRNA-1:exon:7515;Parent=Msa1350700-mRNA-1
tig0011794 five_prime_UTR 26434 26634 26434 ID=Msa1350700-mRNA-1:five_prime_utr;Parent=Msa1350700-mRNA-1
tig0011794 CDS 26635 26746 26635 ID=Msa1350700-mRNA-1:cds;Parent=Msa1350700-mRNA-1
tig0011794 CDS 26850 27067 26850 ID=Msa1350700-mRNA-1:cds;Parent=Msa1350700-mRNA-1
tig0011794 CDS 33837 34384 33837 ID=Msa1350700-mRNA-1:cds;Parent=Msa1350700-mRNA-1
tig0011794 CDS 34811 35840 34811 ID=Msa1350700-mRNA-1:cds;Parent=Msa1350700-mRNA-1
tig0011794 three_prime_UTR 35841 36243 35841 ID=Msa1350700-mRNA-1:three_prime_utr;Parent=Msa1350700-mRNA-1
Gene Sequence

>Msa1350700

ATGGACAAGGAACTTCAACTTTGTTCTGTTGATGCTAATGAAGAAGAAATGGTTTCTCAACAACAACCACAAAGAAGAAAGGGTGGTCTTGTCACCATGCCTTTTATCATTGGGAATGAGGCACTTGCTAAGATGGCAAGTTTGGGACTATTACCAAACATGATATTGTATTTGATGGGATCATACAGACTTCACCTTGGCATATCTACTCAGATACTTCTCTTATCCTCTGCAGCTAGCAATTTCACACCTGTGGTTGGTGCTTTTATTGCAGATTCTTATCTGGGTCGTTTCCTAGGTGTTGGATTAGGTTCTTCTATCAGTTTCCTGGGAATGTCACTGCTGTGGTTAACAGCCATGATCCCGTCGGCACGGCCTCCTGCTTGCATCCATCCATCTGAAGGCTGTGAATCAGCAACACCAGGTCAATTGGCAATGTTATTCTCTGCCTTAATTCTGATAGCAATTGGAAATGGTGGTATTGCATGTTCTTTAGCTTTTGGTGCAGACCAAGTGAATAGAAAAGATAATCCCAATAACAAAAGGGTTTTGGAAATATTCTTCAGTTGGTATTATGCTTTCACAACTATAGCTGTCATAATAGCTCTCACTGGAATAGTATATATCCAAGATCATCTTGGTTGGAAAGTTGGTTTTGGTGTACCAGCAGCACTCATGCTTTTATCAACTGTCTTGTTCTTTCTTGCTTCTCCTCTTTATGTGAAAATTACACAAAGAACCAGCTTGCTCACTGGTTTTGCACAAGTATCTGTTGCTGCCTATAAAAACAGAAAACTTACATTGCCACCTAAAACCTCTCCTGAATTTTACCATCACAAAAAAGACTCAGACCTCGTTGTTCCAACTGATAAACTAAGGTTTCTAAATAAAGCTTGTGTTATTAAAGATCATGAACAAGATATAGCCTCAGATGGTTCAGCAATAAATCGTTGGAGTGTCTGCACAGTAGATCAAGTTGAAGAACTAAAAGCCATTATTAAAGTTATTCCATTGTGGTCAACGGGAATCACAATGTCTATTAACATTGGAGGCTCATTTGGATTGCTGCAAGCTAAATCCTTAGACAGACATATCACTTCACACTTTCAAGTACCAGCAGGATCTTATTCTGTTATCTTGATAGTTGCAATATTAATATGGATAATTATATATGATCGTGTTCTTATTCCTCTAGCATCAAAGATAAAAGGGAAGCCCGTAAGTATCGGTCCAAAGAAAAGAATGGGAATTGGGTTGTTTTTTAATTGTCTTCACTTGGTAGTTGCAGCAATTTTTGAGACTGTAAGGAGAAAGGAAGCAATCAAAGAAGGATATTTGAATGATACTCATGGAGTGTTGAAAATGTCTGCAATGTGGCTTGCACCTCAACTTTGTTTGGCTGGTATAGCTGAAATGTTCAATGTTATTGGCCAAAATGAGTTTTATTACAAAGAGTTTCCAAAGAGTATGGCTAGTGTTGCTGCTTCCCTTTCTGGATTGGGAATGGGTGTGGGAAACTTGGTATCCTCTTTAGTATTGAGCATTATAGAAAATACTACTTCAAGTGAAGGAAATGAAGGATGGGTTTCTGATAATATTAACAAGGGTCATTTCGACAAGTATTATTGGGTTATAGCTGGAATTAATGCTCTAAATCTACTGTATTATTTAGTATGCAGTTGGGCTTATGGACCTACAGTTGATGAAGTATCCAATGTGAGTGAAGAAAATGGTTCCAAGGAGGAACATTCAACTGAATTCAAGCAAGTAAATCCACAAATTGATGACAAGGTTAGTGATGAAACTAGTTCAAAGGAGAAAGAGTTAACTGAATTCAAGAATGGGGGCCAGGTTGAGAAAGCATTCAAGAATAGTGAAGAAAGTGACTTGAAGGAGGAAGATTTGTGA
Protein sequence

>Msa1350700

MDKELQLCSVDANEEEMVSQQQPQRRKGGLVTMPFIIGNEALAKMASLGLLPNMILYLMGSYRLHLGISTQILLLSSAASNFTPVVGAFIADSYLGRFLGVGLGSSISFLGMSLLWLTAMIPSARPPACIHPSEGCESATPGQLAMLFSALILIAIGNGGIACSLAFGADQVNRKDNPNNKRVLEIFFSWYYAFTTIAVIIALTGIVYIQDHLGWKVGFGVPAALMLLSTVLFFLASPLYVKITQRTSLLTGFAQVSVAAYKNRKLTLPPKTSPEFYHHKKDSDLVVPTDKLRFLNKACVIKDHEQDIASDGSAINRWSVCTVDQVEELKAIIKVIPLWSTGITMSINIGGSFGLLQAKSLDRHITSHFQVPAGSYSVILIVAILIWIIIYDRVLIPLASKIKGKPVSIGPKKRMGIGLFFNCLHLVVAAIFETVRRKEAIKEGYLNDTHGVLKMSAMWLAPQLCLAGIAEMFNVIGQNEFYYKEFPKSMASVAASLSGLGMGVGNLVSSLVLSIIENTTSSEGNEGWVSDNINKGHFDKYYWVIAGINALNLLYYLVCSWAYGPTVDEVSNVSEENGSKEEHSTEFKQVNPQIDDKVSDETSSKEKELTEFKNGGQVEKAFKNSEESDLKEEDL*