Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351780 | XP_003598212.1 | 96.907 | 388 | 12 | 0 | 1 | 388 | 1 | 388 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351780 | sp|Q9SUW0|TPPG_ARATH | 62.565 | 382 | 128 | 2 | 1 | 382 | 1 | 367 | 3.48e-166 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351780 | G7IYG6 | 96.907 | 388 | 12 | 0 | 1 | 388 | 1 | 388 | 0.0 | 775 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0177320 | Msa0351780 | 0.802937 | 4.425422e-49 | -8.615850e-47 |
| Msa0266220 | Msa0351780 | 0.847846 | 8.929713e-60 | -8.615850e-47 |
| Msa0287680 | Msa0351780 | 0.831422 | 1.684621e-55 | -8.615850e-47 |
| Msa0351780 | Msa0393750 | 0.920952 | 6.663009e-88 | -8.615850e-47 |
| Msa0351780 | Msa0441600 | 0.926788 | 2.893704e-91 | -8.615850e-47 |
| Msa0351780 | Msa0489120 | 0.909759 | 3.990373e-82 | -8.615850e-47 |
| Msa0351780 | Msa0585840 | 0.805461 | 1.320089e-49 | -8.615850e-47 |
| Msa0351780 | Msa0685060 | 0.804563 | 2.034541e-49 | -8.615850e-47 |
| Msa0351780 | Msa0842040 | 0.815892 | 7.322975e-52 | -8.615850e-47 |
| Msa0351780 | Msa0875340 | 0.817434 | 3.304417e-52 | -8.615850e-47 |
| Msa0351780 | Msa0907710 | 0.808343 | 3.244237e-50 | -8.615850e-47 |
| Msa0351780 | Msa0940560 | 0.840991 | 6.226703e-58 | -8.615850e-47 |
| Msa0351780 | Msa0977100 | 0.839214 | 1.811153e-57 | -8.615850e-47 |
| Msa0351780 | Msa1207330 | 0.807345 | 5.289971e-50 | -8.615850e-47 |
| Msa0351780 | Msa1337440 | 0.802302 | 5.982957e-49 | -8.615850e-47 |
| Msa0351780 | Msa1350700 | 0.846553 | 2.020600e-59 | -8.615850e-47 |
| Msa0351780 | Msa1360260 | 0.845865 | 3.111260e-59 | -8.615850e-47 |
| Msa0351780 | Msa1439410 | 0.832192 | 1.087759e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351780 | MtrunA17_Chr3g0079281 | 96.907 | 388 | 12 | 0 | 1 | 388 | 1 | 388 | 0.0 | 775 |
| Msa0351780 | MtrunA17_Chr4g0018441 | 73.454 | 388 | 93 | 4 | 1 | 385 | 1 | 381 | 0.0 | 570 |
| Msa0351780 | MtrunA17_Chr4g0056481 | 61.140 | 386 | 142 | 5 | 1 | 383 | 1 | 381 | 4.49e-163 | 462 |
| Msa0351780 | MtrunA17_Chr8g0382441 | 53.039 | 362 | 151 | 4 | 25 | 386 | 17 | 359 | 1.43e-131 | 382 |
| Msa0351780 | MtrunA17_Chr3g0115661 | 55.422 | 332 | 126 | 4 | 58 | 388 | 53 | 363 | 7.27e-127 | 370 |
| Msa0351780 | MtrunA17_Chr5g0425711 | 53.846 | 325 | 130 | 3 | 62 | 386 | 69 | 373 | 6.22e-119 | 350 |
| Msa0351780 | MtrunA17_Chr3g0126491 | 54.483 | 290 | 129 | 3 | 95 | 382 | 64 | 352 | 1.06e-110 | 328 |
| Msa0351780 | MtrunA17_Chr8g0347141 | 51.361 | 294 | 142 | 1 | 95 | 387 | 20 | 313 | 4.28e-107 | 317 |
| Msa0351780 | MtrunA17_Chr4g0018781 | 60.000 | 105 | 40 | 2 | 70 | 173 | 1 | 104 | 2.44e-33 | 120 |
| Msa0351780 | MtrunA17_Chr4g0018791 | 68.852 | 61 | 18 | 1 | 268 | 327 | 3 | 63 | 8.40e-22 | 88.6 |
| Msa0351780 | MtrunA17_Chr4g0041381 | 28.169 | 284 | 159 | 12 | 114 | 379 | 588 | 844 | 7.40e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351780 | AT4G22590.1 | 62.565 | 382 | 128 | 2 | 1 | 382 | 1 | 367 | 3.54e-167 | 473 |
| Msa0351780 | AT5G51460.2 | 60.459 | 392 | 138 | 6 | 1 | 385 | 1 | 382 | 3.90e-166 | 470 |
| Msa0351780 | AT5G51460.4 | 60.459 | 392 | 138 | 6 | 1 | 385 | 1 | 382 | 3.90e-166 | 470 |
| Msa0351780 | AT5G51460.1 | 60.305 | 393 | 138 | 7 | 1 | 385 | 1 | 383 | 2.66e-164 | 466 |
| Msa0351780 | AT5G51460.5 | 60.305 | 393 | 138 | 7 | 1 | 385 | 1 | 383 | 2.66e-164 | 466 |
| Msa0351780 | AT5G51460.3 | 60.305 | 393 | 138 | 7 | 1 | 385 | 1 | 383 | 2.66e-164 | 466 |
| Msa0351780 | AT4G12430.1 | 62.304 | 382 | 120 | 3 | 1 | 382 | 1 | 358 | 7.26e-158 | 449 |
| Msa0351780 | AT1G35910.1 | 55.460 | 348 | 137 | 4 | 45 | 387 | 32 | 366 | 2.55e-131 | 381 |
| Msa0351780 | AT4G39770.1 | 57.632 | 321 | 115 | 2 | 64 | 384 | 45 | 344 | 3.84e-126 | 367 |
| Msa0351780 | AT5G10100.3 | 54.012 | 324 | 131 | 3 | 62 | 384 | 58 | 364 | 4.27e-123 | 360 |
| Msa0351780 | AT5G10100.1 | 54.012 | 324 | 131 | 3 | 62 | 384 | 69 | 375 | 6.49e-123 | 360 |
| Msa0351780 | AT1G78090.1 | 50.272 | 368 | 153 | 7 | 31 | 387 | 23 | 371 | 3.24e-120 | 353 |
| Msa0351780 | AT5G65140.1 | 49.198 | 374 | 162 | 4 | 22 | 384 | 11 | 367 | 1.17e-119 | 352 |
| Msa0351780 | AT4G39770.2 | 57.282 | 309 | 111 | 2 | 64 | 372 | 45 | 332 | 1.66e-119 | 350 |
| Msa0351780 | AT2G22190.1 | 55.000 | 320 | 120 | 2 | 66 | 385 | 55 | 350 | 9.98e-119 | 349 |
| Msa0351780 | AT1G22210.1 | 54.206 | 321 | 131 | 2 | 67 | 387 | 14 | 318 | 1.64e-117 | 344 |
| Msa0351780 | AT5G10100.2 | 53.698 | 311 | 126 | 3 | 62 | 371 | 58 | 351 | 1.03e-116 | 343 |
| Msa0351780 | AT1G78090.2 | 50.425 | 353 | 145 | 7 | 31 | 372 | 23 | 356 | 3.32e-115 | 340 |
| Msa0351780 | AT2G22190.2 | 54.545 | 308 | 116 | 2 | 66 | 373 | 55 | 338 | 6.85e-113 | 334 |
| Msa0351780 | AT5G10100.4 | 50.617 | 324 | 122 | 4 | 62 | 384 | 69 | 355 | 1.73e-108 | 323 |
| Msa0351780 | AT5G65140.3 | 48.338 | 331 | 143 | 4 | 22 | 341 | 11 | 324 | 8.28e-103 | 307 |
| Msa0351780 | AT5G65140.2 | 46.906 | 307 | 135 | 4 | 22 | 317 | 11 | 300 | 2.38e-89 | 273 |
| Msa0351780 | AT1G70290.2 | 27.143 | 280 | 157 | 13 | 119 | 379 | 545 | 796 | 2.33e-11 | 65.9 |
| Msa0351780 | AT1G70290.1 | 27.143 | 280 | 157 | 13 | 119 | 379 | 583 | 834 | 2.95e-11 | 65.9 |
Find 104 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTTCATTTATTGGTTTA+AGG | 0.080685 | 3_1:+19155769 | None:intergenic |
| TTAAAGATAGATTCTGATTT+TGG | 0.132673 | 3_1:-19156038 | Msa0351780:three_prime_UTR |
| CCATGAGTTAATCGTAAATT+TGG | 0.145955 | 3_1:+19156924 | None:intergenic |
| GAACAATTCCCTTCATTTAT+TGG | 0.150996 | 3_1:+19155762 | None:intergenic |
| GACCGATGAAGATGCATTTA+AGG | 0.231051 | 3_1:-19156520 | Msa0351780:intron |
| AGCGAGGTTAATAAAGGTTT+TGG | 0.247560 | 3_1:-19156391 | Msa0351780:CDS |
| CTCGATGATGTTCGTTCTAA+TGG | 0.251756 | 3_1:-19158707 | Msa0351780:CDS |
| TCAGTAGACCTAATGCAATT+AGG | 0.262806 | 3_1:+19157782 | None:intergenic |
| AAACCGCGTTGCTTTCTTTA+GGG | 0.291548 | 3_1:+19156350 | None:intergenic |
| CCCTTCATTTATTGGTTTAA+GGG | 0.314433 | 3_1:+19155770 | None:intergenic |
| TACTCACAAGAAAATATCTA+TGG | 0.331294 | 3_1:-19158654 | Msa0351780:CDS |
| TAAACCGCGTTGCTTTCTTT+AGG | 0.331760 | 3_1:+19156349 | None:intergenic |
| AGTCATGGAATGGACATAAT+TGG | 0.337966 | 3_1:-19157836 | Msa0351780:CDS |
| TAATCAAAATTATATAAAAT+AGG | 0.340161 | 3_1:+19155650 | None:intergenic |
| GAGGAGCATGATTTGTCTTC+AGG | 0.346590 | 3_1:+19158873 | None:intergenic |
| CAGTAGACCTAATGCAATTA+GGG | 0.349056 | 3_1:+19157783 | None:intergenic |
| TAATGTACAGAGTTGGGATT+TGG | 0.368930 | 3_1:-19156982 | Msa0351780:intron |
| CTAGAGTTTCCATCAGCAAT+TGG | 0.374834 | 3_1:-19158476 | Msa0351780:CDS |
| ACATGAATTTGTTGGATTAA+CGG | 0.389427 | 3_1:-19157876 | Msa0351780:CDS |
| TAGAGTTTCCATCAGCAATT+GGG | 0.394464 | 3_1:-19158475 | Msa0351780:CDS |
| ATAATCACCCTAATTGCATT+AGG | 0.394713 | 3_1:-19157790 | Msa0351780:CDS |
| AAGAAAATATCTATGGATAT+TGG | 0.399008 | 3_1:-19158647 | Msa0351780:CDS |
| TGTAAAATTCTCAATAGATC+TGG | 0.401345 | 3_1:-19158906 | Msa0351780:five_prime_UTR |
| ATTAGGGTGATTATCAGATA+TGG | 0.403378 | 3_1:+19157799 | None:intergenic |
| CCTTGATCTTGTCCTTGTTA+AGG | 0.404552 | 3_1:+19158832 | None:intergenic |
| CGCTCAGGATTATCAACAAT+TGG | 0.412496 | 3_1:+19158377 | None:intergenic |
| ACCAGTGATTGACTGGGATA+AGG | 0.413046 | 3_1:-19156723 | Msa0351780:CDS |
| TTCCATGACTACCAGCATAA+TGG | 0.413429 | 3_1:+19157849 | None:intergenic |
| CCAGTGATTGACTGGGATAA+GGG | 0.414884 | 3_1:-19156722 | Msa0351780:CDS |
| CTTCAGGTACATGAATTTGT+TGG | 0.418768 | 3_1:-19157884 | Msa0351780:intron |
| AGGTTCGACCAGTGATTGAC+TGG | 0.424416 | 3_1:-19156730 | Msa0351780:CDS |
| ACGATTCCACGGAAGAAGAT+AGG | 0.432313 | 3_1:-19158734 | Msa0351780:CDS |
| TGATTTGTCTTCAGGTCCAT+TGG | 0.443083 | 3_1:+19158881 | None:intergenic |
| GCAGCATCAGCTTCAGAAGA+TGG | 0.444694 | 3_1:+19158614 | None:intergenic |
| TTGTGGAAGCTGTAAATTCA+TGG | 0.446797 | 3_1:-19155906 | Msa0351780:three_prime_UTR |
| TTCTCAAGTCACTTGTGGTA+TGG | 0.448368 | 3_1:-19156117 | Msa0351780:CDS |
| AGAAAAGTTGAAGTATTTGT+CGG | 0.453164 | 3_1:+19158773 | None:intergenic |
| CACTGTTTCTTGATTACGAT+GGG | 0.454896 | 3_1:-19158409 | Msa0351780:CDS |
| CCCTTATCCCAGTCAATCAC+TGG | 0.457934 | 3_1:+19156722 | None:intergenic |
| TAAGCTCTGAAGAAGATCAT+AGG | 0.462078 | 3_1:-19155968 | Msa0351780:three_prime_UTR |
| TGCTGCTTATTTAACCTGGC+TGG | 0.464042 | 3_1:-19158597 | Msa0351780:intron |
| GCCCTTAAACCAATAAATGA+AGG | 0.465117 | 3_1:-19155771 | Msa0351780:three_prime_UTR |
| TACACTCAGTGAGCAACTTA+CGG | 0.466005 | 3_1:+19157354 | None:intergenic |
| CAAATTACTAACCTTGCAAA+AGG | 0.474768 | 3_1:-19158443 | Msa0351780:CDS |
| CTCCATTATGCTGGTAGTCA+TGG | 0.479976 | 3_1:-19157851 | Msa0351780:CDS |
| CTGATGCTGCTTATTTAACC+TGG | 0.480480 | 3_1:-19158601 | Msa0351780:CDS |
| ATGATGTTCGTTCTAATGGT+TGG | 0.487662 | 3_1:-19158703 | Msa0351780:CDS |
| CAGGATATTACATACATTGT+CGG | 0.494126 | 3_1:+19158343 | None:intergenic |
| AACCGCGTTGCTTTCTTTAG+GGG | 0.494436 | 3_1:+19156351 | None:intergenic |
| CTCAATAGATCTGGATCCAA+TGG | 0.500398 | 3_1:-19158897 | Msa0351780:exon |
| AAGGTTAGTAATTTGTTCAA+AGG | 0.511038 | 3_1:+19158451 | None:intergenic |
| TAGCGGAAGAAGCCGTGAAA+AGG | 0.511218 | 3_1:-19158173 | Msa0351780:intron |
| TTCCGTGGAATCGTTAGCGA+TGG | 0.515888 | 3_1:+19158743 | None:intergenic |
| CATTAGGTCTACTGATAAGA+AGG | 0.516416 | 3_1:-19157774 | Msa0351780:intron |
| TTTCCGACTGCAATAATTAG+CGG | 0.519792 | 3_1:-19158190 | Msa0351780:CDS |
| CTCTGTAGTATAATGTATAG+AGG | 0.522728 | 3_1:-19156086 | Msa0351780:exon |
| CTCTCTTTGTGATCCTTCAG+AGG | 0.524465 | 3_1:-19156326 | Msa0351780:intron |
| GAATTCTCCCTTAAATTGAA+AGG | 0.525250 | 3_1:+19155728 | None:intergenic |
| TGTACAGAGTTGGGATTTGG+TGG | 0.528879 | 3_1:-19156979 | Msa0351780:intron |
| ACAAGATCAAGGCTCGGTGC+AGG | 0.529411 | 3_1:-19158821 | Msa0351780:CDS |
| AACCTTAAATGCATCTTCAT+CGG | 0.535866 | 3_1:+19156518 | None:intergenic |
| TCAAAGGCCCCAATTGCTGA+TGG | 0.536930 | 3_1:+19158467 | None:intergenic |
| ACCATAAGAATTACCTCTGA+AGG | 0.544685 | 3_1:+19156313 | None:intergenic |
| TTAACGGATCTCCATTATGC+TGG | 0.547318 | 3_1:-19157860 | Msa0351780:CDS |
| ATCGGCAGGAATTCAGCAGC+AGG | 0.547400 | 3_1:+19157609 | None:intergenic |
| TCGGACATGAAAGCACGCTC+AGG | 0.550059 | 3_1:+19158362 | None:intergenic |
| GATGTGCTAGCTATATATAT+TGG | 0.554483 | 3_1:-19156552 | Msa0351780:CDS |
| CTTCCGCTAATTATTGCAGT+CGG | 0.556782 | 3_1:+19158187 | None:intergenic |
| CCTTAACAAGGACAAGATCA+AGG | 0.569283 | 3_1:-19158832 | Msa0351780:CDS |
| GTATGTGTTTCCTACCAGCC+AGG | 0.571482 | 3_1:+19158583 | None:intergenic |
| TTATGCTGGTAGTCATGGAA+TGG | 0.572153 | 3_1:-19157846 | Msa0351780:CDS |
| GGAATTTCTCAAGTCACTTG+TGG | 0.574443 | 3_1:-19156122 | Msa0351780:CDS |
| CTGATACTGCAACCTTAACA+AGG | 0.577184 | 3_1:-19158844 | Msa0351780:CDS |
| GCAGGAATTCAGCAGCAGGT+TGG | 0.578451 | 3_1:+19157613 | None:intergenic |
| ATACCTCATCAATCATCGGC+AGG | 0.579445 | 3_1:+19157595 | None:intergenic |
| CCAAATTTACGATTAACTCA+TGG | 0.579608 | 3_1:-19156924 | Msa0351780:CDS |
| TCAGATATGGACGGTCTAAG+AGG | 0.581795 | 3_1:+19157812 | None:intergenic |
| ATATCTATGGATATTGGTCA+TGG | 0.583838 | 3_1:-19158641 | Msa0351780:CDS |
| ATATATAGCTAGCACATCAT+CGG | 0.585091 | 3_1:+19156557 | None:intergenic |
| AAGATTATCAAAATCTACCA+AGG | 0.590336 | 3_1:-19155859 | Msa0351780:three_prime_UTR |
| CTATATATATTGGTGACGAT+CGG | 0.591664 | 3_1:-19156542 | Msa0351780:CDS |
| CCCTTAAACCAATAAATGAA+GGG | 0.593813 | 3_1:-19155770 | Msa0351780:three_prime_UTR |
| CGCGTTGCTTTCTTTAGGGG+CGG | 0.594578 | 3_1:+19156354 | None:intergenic |
| GTGCATACCTCATCAATCAT+CGG | 0.605918 | 3_1:+19157591 | None:intergenic |
| AGAATTCCTATCTTCTTCCG+TGG | 0.605970 | 3_1:+19158728 | None:intergenic |
| GTCCATCGCTAACGATTCCA+CGG | 0.607941 | 3_1:-19158745 | Msa0351780:CDS |
| ACGATTAACTCATGGTCGGA+AGG | 0.614382 | 3_1:-19156916 | Msa0351780:intron |
| GGAGAGCATGACAGACTCGA+AGG | 0.618022 | 3_1:+19158794 | None:intergenic |
| AGATTATCAAAATCTACCAA+GGG | 0.625044 | 3_1:-19155858 | Msa0351780:three_prime_UTR |
| AGAGTTTCCATCAGCAATTG+GGG | 0.625927 | 3_1:-19158474 | Msa0351780:CDS |
| GCACTGTTTCTTGATTACGA+TGG | 0.630628 | 3_1:-19158410 | Msa0351780:CDS |
| ATTTACGATTAACTCATGGT+CGG | 0.632995 | 3_1:-19156920 | Msa0351780:CDS |
| GAGTGTACAAAAGACATCAA+AGG | 0.636577 | 3_1:-19157338 | Msa0351780:CDS |
| ACAAGGACAAGATCAAGGCT+CGG | 0.658800 | 3_1:-19158827 | Msa0351780:CDS |
| GATTATCAAAATCTACCAAG+GGG | 0.673290 | 3_1:-19155857 | Msa0351780:three_prime_UTR |
| GGTTCGACCAGTGATTGACT+GGG | 0.682318 | 3_1:-19156729 | Msa0351780:CDS |
| GGGTGATTATCAGATATGGA+CGG | 0.682398 | 3_1:+19157803 | None:intergenic |
| GCGTGCTGCTGTTAAAAGTG+TGG | 0.708932 | 3_1:-19158221 | Msa0351780:CDS |
| ACATTATCGCAATGTAGACG+AGG | 0.713352 | 3_1:-19157279 | Msa0351780:CDS |
| TTATCGCAATGTAGACGAGG+AGG | 0.714342 | 3_1:-19157276 | Msa0351780:intron |
| GTTGCAGTATCAGCAATGCG+AGG | 0.729280 | 3_1:+19158854 | None:intergenic |
| ATTATCAAAATCTACCAAGG+GGG | 0.730497 | 3_1:-19155856 | Msa0351780:three_prime_UTR |
| ATTCCTGCCGATGATTGATG+AGG | 0.731711 | 3_1:-19157598 | Msa0351780:intron |
| CGCCCCTAAAGAAAGCAACG+CGG | 0.751129 | 3_1:-19156353 | Msa0351780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATAACTGATATAAAA+TGG | - | chr3_1:19158246-19158265 | Msa0351780:intron | 10.0% |
| !!! | TAAATAATATTTCTTTTCTA+GGG | + | chr3_1:19158855-19158874 | None:intergenic | 10.0% |
| !!! | TTAAATAATATTTCTTTTCT+AGG | + | chr3_1:19158856-19158875 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTGTTAAAAGTTT+TGG | - | chr3_1:19155681-19155700 | Msa0351780:three_prime_UTR | 15.0% |
| !!! | ATCAATTTTGTTCTAATTTA+AGG | - | chr3_1:19155728-19155747 | Msa0351780:three_prime_UTR | 15.0% |
| !! | GAAGATTATAAATCAATATA+GGG | + | chr3_1:19157012-19157031 | None:intergenic | 15.0% |
| !! | AGAAGATTATAAATCAATAT+AGG | + | chr3_1:19157013-19157032 | None:intergenic | 15.0% |
| !!! | TTATAATCTTCTAAAATTAC+AGG | - | chr3_1:19157021-19157040 | Msa0351780:intron | 15.0% |
| !!! | TATAATCTTCTAAAATTACA+GGG | - | chr3_1:19157022-19157041 | Msa0351780:intron | 15.0% |
| !!! | AATCTAGAATAAAAATTGAT+AGG | + | chr3_1:19157144-19157163 | None:intergenic | 15.0% |
| !! | ATTGAAAACAACAAAAAAAT+AGG | + | chr3_1:19157486-19157505 | None:intergenic | 15.0% |
| !!! | TTAATTTGTTGATTATGTAA+TGG | - | chr3_1:19158014-19158033 | Msa0351780:intron | 15.0% |
| !! | TATATCAGTTATAAAAAGTA+AGG | + | chr3_1:19158243-19158262 | None:intergenic | 15.0% |
| !!! | TTATTTTCTTTCTGAATTAT+TGG | - | chr3_1:19158877-19158896 | Msa0351780:CDS | 15.0% |
| !! | AAATTGAAAGGAAAAAATAA+AGG | + | chr3_1:19158939-19158958 | None:intergenic | 15.0% |
| !!! | TATTTTTTCCTTTCAATTTA+AGG | - | chr3_1:19158940-19158959 | Msa0351780:five_prime_UTR | 15.0% |
| !!! | ATTTTTTCCTTTCAATTTAA+GGG | - | chr3_1:19158941-19158960 | Msa0351780:five_prime_UTR | 15.0% |
| !!! | TTCATTTTTTACATGTAATT+TGG | - | chr3_1:19158978-19158997 | Msa0351780:five_prime_UTR | 15.0% |
| !!! | TTGGTTTTAAAGTAGAAATT+TGG | - | chr3_1:19155700-19155719 | Msa0351780:three_prime_UTR | 20.0% |
| !! | AAGAAAATATCTATGGATAT+TGG | - | chr3_1:19156029-19156048 | Msa0351780:three_prime_UTR | 20.0% |
| !! | ATAAAAAAAGGAAACGAATA+AGG | + | chr3_1:19156169-19156188 | None:intergenic | 20.0% |
| !! | GCTGCAAAAATTATAAAAAA+AGG | + | chr3_1:19156181-19156200 | None:intergenic | 20.0% |
| !!! | TTGTTTTGATTTAACTGATT+CGG | - | chr3_1:19156412-19156431 | Msa0351780:intron | 20.0% |
| !! | TGTAAAAAAATGTTGATGTT+AGG | - | chr3_1:19156738-19156757 | Msa0351780:CDS | 20.0% |
| !!! | TCATTTTCTCAAATTCTTAT+TGG | - | chr3_1:19157212-19157231 | Msa0351780:intron | 20.0% |
| !!! | GTTAAAAATGGAATCATTTT+AGG | + | chr3_1:19157610-19157629 | None:intergenic | 20.0% |
| !! | TGAATATGAAACTAAATAAG+AGG | + | chr3_1:19157672-19157691 | None:intergenic | 20.0% |
| !! | GAATAATGTTTGTATCATTA+GGG | - | chr3_1:19158476-19158495 | Msa0351780:CDS | 20.0% |
| !!! | TTAAAGATAGATTCTGATTT+TGG | - | chr3_1:19158638-19158657 | Msa0351780:CDS | 20.0% |
| !!! | TGAGAAAATTTCAATTTTCA+AGG | - | chr3_1:19158668-19158687 | Msa0351780:CDS | 20.0% |
| !!! | GAGAAAATTTCAATTTTCAA+GGG | - | chr3_1:19158669-19158688 | Msa0351780:CDS | 20.0% |
| ! | TGTAAAATTCTCAATAGATC+TGG | - | chr3_1:19155770-19155789 | Msa0351780:three_prime_UTR | 25.0% |
| !! | AGAAAAGTTGAAGTATTTGT+CGG | + | chr3_1:19155906-19155925 | None:intergenic | 25.0% |
| !! | ATAGATATTTTCTTGTGAGT+AGG | + | chr3_1:19156023-19156042 | None:intergenic | 25.0% |
| ! | TACTCACAAGAAAATATCTA+TGG | - | chr3_1:19156022-19156041 | Msa0351780:three_prime_UTR | 25.0% |
| !!! | AAGGTTAGTAATTTGTTCAA+AGG | + | chr3_1:19156228-19156247 | None:intergenic | 25.0% |
| ! | ACAAGAGAAGAAAAATAATC+AGG | + | chr3_1:19156396-19156415 | None:intergenic | 25.0% |
| ! | ATTTACATTTCTCTATATGC+AGG | + | chr3_1:19156601-19156620 | None:intergenic | 25.0% |
| !!! | ACATGAATTTGTTGGATTAA+CGG | - | chr3_1:19156800-19156819 | Msa0351780:intron | 25.0% |
| !!! | TTCTAGAAGTATCTTTCTAA+AGG | - | chr3_1:19156984-19157003 | Msa0351780:intron | 25.0% |
| !!! | TCTAGAAGTATCTTTCTAAA+GGG | - | chr3_1:19156985-19157004 | Msa0351780:intron | 25.0% |
| ! | ATTCATATAATGTACAGAGT+TGG | - | chr3_1:19157687-19157706 | Msa0351780:intron | 25.0% |
| ! | TTCATATAATGTACAGAGTT+GGG | - | chr3_1:19157688-19157707 | Msa0351780:intron | 25.0% |
| !!! | ACGTGTTTTTGATATTATGA+AGG | - | chr3_1:19157724-19157743 | Msa0351780:intron | 25.0% |
| ! | TATAGTTACTGATATTGTTC+AGG | - | chr3_1:19157917-19157936 | Msa0351780:intron | 25.0% |
| !! | ATTTAAGGTTAATATGTTGC+TGG | - | chr3_1:19158171-19158190 | Msa0351780:intron | 25.0% |
| ! | AATTGCAACAAAACTTTCAA+AGG | + | chr3_1:19158410-19158429 | None:intergenic | 25.0% |
| ! | GGAATAATGTTTGTATCATT+AGG | - | chr3_1:19158475-19158494 | Msa0351780:CDS | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+AGG | + | chr3_1:19158502-19158521 | None:intergenic | 25.0% |
| !! | CTTATTTAAAGTCAAACTTG+TGG | - | chr3_1:19158517-19158536 | Msa0351780:intron | 25.0% |
| !! | ATAGATTCTGATTTTGGATT+TGG | - | chr3_1:19158644-19158663 | Msa0351780:CDS | 25.0% |
| ! | AAGATTATCAAAATCTACCA+AGG | - | chr3_1:19158817-19158836 | Msa0351780:CDS | 25.0% |
| ! | AGATTATCAAAATCTACCAA+GGG | - | chr3_1:19158818-19158837 | Msa0351780:CDS | 25.0% |
| ! | AATACTTCAACTTTTCTGCA+TGG | - | chr3_1:19155909-19155928 | Msa0351780:three_prime_UTR | 30.0% |
| ATATCTATGGATATTGGTCA+TGG | - | chr3_1:19156035-19156054 | Msa0351780:three_prime_UTR | 30.0% | |
| TCGACAACAAATTACATAGA+GGG | + | chr3_1:19156127-19156146 | None:intergenic | 30.0% | |
| TTCGACAACAAATTACATAG+AGG | + | chr3_1:19156128-19156147 | None:intergenic | 30.0% | |
| CAAATTACTAACCTTGCAAA+AGG | - | chr3_1:19156233-19156252 | Msa0351780:intron | 30.0% | |
| CAGGATATTACATACATTGT+CGG | + | chr3_1:19156336-19156355 | None:intergenic | 30.0% | |
| ATGTATGTAATATCCTGCAA+TGG | - | chr3_1:19156339-19156358 | Msa0351780:CDS | 30.0% | |
| AAAAGAGAAAAATGCAGTAC+AGG | + | chr3_1:19156565-19156584 | None:intergenic | 30.0% | |
| TTCATGTACCTGAAGAAATA+AGG | + | chr3_1:19156787-19156806 | None:intergenic | 30.0% | |
| ATTAGGGTGATTATCAGATA+TGG | + | chr3_1:19156880-19156899 | None:intergenic | 30.0% | |
| ATAATCACCCTAATTGCATT+AGG | - | chr3_1:19156886-19156905 | Msa0351780:intron | 30.0% | |
| AGAAATCATGAACTGAAAAG+TGG | + | chr3_1:19156930-19156949 | None:intergenic | 30.0% | |
| !! | TCTTCTAAAATTACAGGGTA+AGG | - | chr3_1:19157027-19157046 | Msa0351780:intron | 30.0% |
| TGTAATACATATGTCAGTGT+TGG | + | chr3_1:19157182-19157201 | None:intergenic | 30.0% | |
| GAGAATCAAAAAGGAAAGAA+GGG | + | chr3_1:19157440-19157459 | None:intergenic | 30.0% | |
| CCATGAGTTAATCGTAAATT+TGG | + | chr3_1:19157755-19157774 | None:intergenic | 30.0% | |
| CCAAATTTACGATTAACTCA+TGG | - | chr3_1:19157752-19157771 | Msa0351780:intron | 30.0% | |
| ATTTACGATTAACTCATGGT+CGG | - | chr3_1:19157756-19157775 | Msa0351780:intron | 30.0% | |
| TAACAGACATGTCTCTTAAA+AGG | + | chr3_1:19157882-19157901 | None:intergenic | 30.0% | |
| !! | TGATATTGTTCAGGTTTTAG+AGG | - | chr3_1:19157926-19157945 | Msa0351780:intron | 30.0% |
| ! | CACTAGACATGTTTTCATTT+AGG | - | chr3_1:19158085-19158104 | Msa0351780:intron | 30.0% |
| ATATATAGCTAGCACATCAT+CGG | + | chr3_1:19158122-19158141 | None:intergenic | 30.0% | |
| GATGTGCTAGCTATATATAT+TGG | - | chr3_1:19158124-19158143 | Msa0351780:intron | 30.0% | |
| !! | CTATATATATTGGTGACGAT+CGG | - | chr3_1:19158134-19158153 | Msa0351780:intron | 30.0% |
| AACCTTAAATGCATCTTCAT+CGG | + | chr3_1:19158161-19158180 | None:intergenic | 30.0% | |
| ! | GCAATTTTGTACATTTGCTT+TGG | - | chr3_1:19158424-19158443 | Msa0351780:CDS | 30.0% |
| CTCTGTAGTATAATGTATAG+AGG | - | chr3_1:19158590-19158609 | Msa0351780:intron | 30.0% | |
| !! | TTCAATTTTCAAGGGTTTCT+TGG | - | chr3_1:19158677-19158696 | Msa0351780:CDS | 30.0% |
| !!! | TTTTTTGTTCAAAGCTCTTG+TGG | - | chr3_1:19158753-19158772 | Msa0351780:CDS | 30.0% |
| GATTATCAAAATCTACCAAG+GGG | - | chr3_1:19158819-19158838 | Msa0351780:CDS | 30.0% | |
| ATTATCAAAATCTACCAAGG+GGG | - | chr3_1:19158820-19158839 | Msa0351780:CDS | 30.0% | |
| !! | CCCTTCATTTATTGGTTTAA+GGG | + | chr3_1:19158909-19158928 | None:intergenic | 30.0% |
| CCCTTAAACCAATAAATGAA+GGG | - | chr3_1:19158906-19158925 | Msa0351780:five_prime_UTR | 30.0% | |
| !! | TCCCTTCATTTATTGGTTTA+AGG | + | chr3_1:19158910-19158929 | None:intergenic | 30.0% |
| GAACAATTCCCTTCATTTAT+TGG | + | chr3_1:19158917-19158936 | None:intergenic | 30.0% | |
| GAATTCTCCCTTAAATTGAA+AGG | + | chr3_1:19158951-19158970 | None:intergenic | 30.0% | |
| ATGATGTTCGTTCTAATGGT+TGG | - | chr3_1:19155973-19155992 | Msa0351780:three_prime_UTR | 35.0% | |
| TAGAGTTTCCATCAGCAATT+GGG | - | chr3_1:19156201-19156220 | Msa0351780:intron | 35.0% | |
| ! | CTATTTTCTTGCCTTTTGCA+AGG | + | chr3_1:19156247-19156266 | None:intergenic | 35.0% |
| ! | CACTGTTTCTTGATTACGAT+GGG | - | chr3_1:19156267-19156286 | Msa0351780:intron | 35.0% |
| TTTCCGACTGCAATAATTAG+CGG | - | chr3_1:19156486-19156505 | Msa0351780:intron | 35.0% | |
| ! | TTTCTTCAGCTACCTTTTCA+CGG | + | chr3_1:19156518-19156537 | None:intergenic | 35.0% |
| !!! | TTTTTTCAACTGTACCAGAG+GGG | + | chr3_1:19156697-19156716 | None:intergenic | 35.0% |
| !!! | CTTTTTTCAACTGTACCAGA+GGG | + | chr3_1:19156698-19156717 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCAACTGTACCAG+AGG | + | chr3_1:19156699-19156718 | None:intergenic | 35.0% |
| TACAAGTAAAGTGACACTGA+TGG | + | chr3_1:19156722-19156741 | None:intergenic | 35.0% | |
| AAATAAGGTGCAACAATGGT+TGG | + | chr3_1:19156772-19156791 | None:intergenic | 35.0% | |
| GAAGAAATAAGGTGCAACAA+TGG | + | chr3_1:19156776-19156795 | None:intergenic | 35.0% | |
| ! | TTGTTGCACCTTATTTCTTC+AGG | - | chr3_1:19156776-19156795 | Msa0351780:intron | 35.0% |
| CTTCAGGTACATGAATTTGT+TGG | - | chr3_1:19156792-19156811 | Msa0351780:intron | 35.0% | |
| AGTCATGGAATGGACATAAT+TGG | - | chr3_1:19156840-19156859 | Msa0351780:intron | 35.0% | |
| CAGTAGACCTAATGCAATTA+GGG | + | chr3_1:19156896-19156915 | None:intergenic | 35.0% | |
| TCAGTAGACCTAATGCAATT+AGG | + | chr3_1:19156897-19156916 | None:intergenic | 35.0% | |
| CATTAGGTCTACTGATAAGA+AGG | - | chr3_1:19156902-19156921 | Msa0351780:intron | 35.0% | |
| GAGTGTACAAAAGACATCAA+AGG | - | chr3_1:19157338-19157357 | Msa0351780:CDS | 35.0% | |
| CGAGAATCAAAAAGGAAAGA+AGG | + | chr3_1:19157441-19157460 | None:intergenic | 35.0% | |
| TACAAGAGCGAGAATCAAAA+AGG | + | chr3_1:19157449-19157468 | None:intergenic | 35.0% | |
| !! | CGCGATAAGTTGGTTAAAAA+TGG | + | chr3_1:19157622-19157641 | None:intergenic | 35.0% |
| TGATGAAATACGCGATAAGT+TGG | + | chr3_1:19157632-19157651 | None:intergenic | 35.0% | |
| ACTTATCGCGTATTTCATCA+TGG | - | chr3_1:19157632-19157651 | Msa0351780:CDS | 35.0% | |
| TAATGTACAGAGTTGGGATT+TGG | - | chr3_1:19157694-19157713 | Msa0351780:intron | 35.0% | |
| ! | ACATTTTTGCTCGAATCACT+TGG | - | chr3_1:19157987-19158006 | Msa0351780:intron | 35.0% |
| !! | GGTTAGTTTGCGTATATTCA+AGG | - | chr3_1:19158035-19158054 | Msa0351780:intron | 35.0% |
| GATATAAAATGGACCGTAAC+AGG | - | chr3_1:19158257-19158276 | Msa0351780:intron | 35.0% | |
| !! | GTTTTGAGCGAGGTTAATAA+AGG | - | chr3_1:19158279-19158298 | Msa0351780:intron | 35.0% |
| ! | AGCGAGGTTAATAAAGGTTT+TGG | - | chr3_1:19158285-19158304 | Msa0351780:intron | 35.0% |
| TCCTTCAGAGGTAATTCTTA+TGG | - | chr3_1:19158362-19158381 | Msa0351780:CDS | 35.0% | |
| ACCATAAGAATTACCTCTGA+AGG | + | chr3_1:19158366-19158385 | None:intergenic | 35.0% | |
| ! | CATGTTGTTTGCTAGTACAT+TGG | - | chr3_1:19158454-19158473 | Msa0351780:CDS | 35.0% |
| !! | TAAGCTCTGAAGAAGATCAT+AGG | - | chr3_1:19158708-19158727 | Msa0351780:CDS | 35.0% |
| TTGTGGAAGCTGTAAATTCA+TGG | - | chr3_1:19158770-19158789 | Msa0351780:CDS | 35.0% | |
| GCCCTTAAACCAATAAATGA+AGG | - | chr3_1:19158905-19158924 | Msa0351780:five_prime_UTR | 35.0% | |
| CTCAATAGATCTGGATCCAA+TGG | - | chr3_1:19155779-19155798 | Msa0351780:three_prime_UTR | 40.0% | |
| ! | TGATTTGTCTTCAGGTCCAT+TGG | + | chr3_1:19155798-19155817 | None:intergenic | 40.0% |
| CTGATACTGCAACCTTAACA+AGG | - | chr3_1:19155832-19155851 | Msa0351780:three_prime_UTR | 40.0% | |
| CCTTGATCTTGTCCTTGTTA+AGG | + | chr3_1:19155847-19155866 | None:intergenic | 40.0% | |
| CCTTAACAAGGACAAGATCA+AGG | - | chr3_1:19155844-19155863 | Msa0351780:three_prime_UTR | 40.0% | |
| AGAATTCCTATCTTCTTCCG+TGG | + | chr3_1:19155951-19155970 | None:intergenic | 40.0% | |
| CTCGATGATGTTCGTTCTAA+TGG | - | chr3_1:19155969-19155988 | Msa0351780:three_prime_UTR | 40.0% | |
| ! | CTGATGCTGCTTATTTAACC+TGG | - | chr3_1:19156075-19156094 | Msa0351780:three_prime_UTR | 40.0% |
| CTAGAGTTTCCATCAGCAAT+TGG | - | chr3_1:19156200-19156219 | Msa0351780:intron | 40.0% | |
| AGAGTTTCCATCAGCAATTG+GGG | - | chr3_1:19156202-19156221 | Msa0351780:intron | 40.0% | |
| ! | GCACTGTTTCTTGATTACGA+TGG | - | chr3_1:19156266-19156285 | Msa0351780:intron | 40.0% |
| CGCTCAGGATTATCAACAAT+TGG | + | chr3_1:19156302-19156321 | None:intergenic | 40.0% | |
| CTTCCGCTAATTATTGCAGT+CGG | + | chr3_1:19156492-19156511 | None:intergenic | 40.0% | |
| TCATGTTTGTACTAGCTCAG+TGG | - | chr3_1:19156630-19156649 | Msa0351780:intron | 40.0% | |
| GATTTGAACTATGTCCCTTG+AGG | + | chr3_1:19156675-19156694 | None:intergenic | 40.0% | |
| ! | TTAACGGATCTCCATTATGC+TGG | - | chr3_1:19156816-19156835 | Msa0351780:intron | 40.0% |
| TTCCATGACTACCAGCATAA+TGG | + | chr3_1:19156830-19156849 | None:intergenic | 40.0% | |
| TTATGCTGGTAGTCATGGAA+TGG | - | chr3_1:19156830-19156849 | Msa0351780:intron | 40.0% | |
| GGGTGATTATCAGATATGGA+CGG | + | chr3_1:19156876-19156895 | None:intergenic | 40.0% | |
| GTGCATACCTCATCAATCAT+CGG | + | chr3_1:19157088-19157107 | None:intergenic | 40.0% | |
| !! | TCTTATTGGTGTCAGCATGT+TGG | - | chr3_1:19157226-19157245 | Msa0351780:intron | 40.0% |
| ATGAGCACTAACACAGATAC+CGG | + | chr3_1:19157272-19157291 | None:intergenic | 40.0% | |
| TAGTGCTCATAGATCATGAC+TGG | - | chr3_1:19157282-19157301 | Msa0351780:CDS | 40.0% | |
| TACACTCAGTGAGCAACTTA+CGG | + | chr3_1:19157325-19157344 | None:intergenic | 40.0% | |
| ACATTATCGCAATGTAGACG+AGG | - | chr3_1:19157397-19157416 | Msa0351780:intron | 40.0% | |
| GACCGATGAAGATGCATTTA+AGG | - | chr3_1:19158156-19158175 | Msa0351780:intron | 40.0% | |
| ! | AAACCGCGTTGCTTTCTTTA+GGG | + | chr3_1:19158329-19158348 | None:intergenic | 40.0% |
| ! | TAAACCGCGTTGCTTTCTTT+AGG | + | chr3_1:19158330-19158349 | None:intergenic | 40.0% |
| !! | TGTATCATTAGGGCCTTGTT+TGG | - | chr3_1:19158486-19158505 | Msa0351780:intron | 40.0% |
| GTCAAACTTGTGGTATATGC+AGG | - | chr3_1:19158527-19158546 | Msa0351780:intron | 40.0% | |
| GGAATTTCTCAAGTCACTTG+TGG | - | chr3_1:19158554-19158573 | Msa0351780:intron | 40.0% | |
| TTCTCAAGTCACTTGTGGTA+TGG | - | chr3_1:19158559-19158578 | Msa0351780:intron | 40.0% | |
| ! | GAGGAGCATGATTTGTCTTC+AGG | + | chr3_1:19155806-19155825 | None:intergenic | 45.0% |
| ACAAGGACAAGATCAAGGCT+CGG | - | chr3_1:19155849-19155868 | Msa0351780:three_prime_UTR | 45.0% | |
| ACGATTCCACGGAAGAAGAT+AGG | - | chr3_1:19155942-19155961 | Msa0351780:three_prime_UTR | 45.0% | |
| ! | TGCTGCTTATTTAACCTGGC+TGG | - | chr3_1:19156079-19156098 | Msa0351780:exon | 45.0% |
| GCTTATTTAACCTGGCTGGT+AGG | - | chr3_1:19156083-19156102 | Msa0351780:exon | 45.0% | |
| CTATGTCCCTTGAGGTTACA+AGG | + | chr3_1:19156667-19156686 | None:intergenic | 45.0% | |
| GACATAGTTCAAATCCCCTC+TGG | - | chr3_1:19156680-19156699 | Msa0351780:intron | 45.0% | |
| CTCCATTATGCTGGTAGTCA+TGG | - | chr3_1:19156825-19156844 | Msa0351780:intron | 45.0% | |
| TCAGATATGGACGGTCTAAG+AGG | + | chr3_1:19156867-19156886 | None:intergenic | 45.0% | |
| ATTCCTGCCGATGATTGATG+AGG | - | chr3_1:19157078-19157097 | Msa0351780:intron | 45.0% | |
| ATACCTCATCAATCATCGGC+AGG | + | chr3_1:19157084-19157103 | None:intergenic | 45.0% | |
| TGAGCACTAACACAGATACC+GGG | + | chr3_1:19157271-19157290 | None:intergenic | 45.0% | |
| ! | TGACTGGCTCATGTTTATGC+AGG | - | chr3_1:19157298-19157317 | Msa0351780:CDS | 45.0% |
| TTATCGCAATGTAGACGAGG+AGG | - | chr3_1:19157400-19157419 | Msa0351780:intron | 45.0% | |
| TGTACAGAGTTGGGATTTGG+TGG | - | chr3_1:19157697-19157716 | Msa0351780:intron | 45.0% | |
| ACGATTAACTCATGGTCGGA+AGG | - | chr3_1:19157760-19157779 | Msa0351780:intron | 45.0% | |
| ACCAGTGATTGACTGGGATA+AGG | - | chr3_1:19157953-19157972 | Msa0351780:intron | 45.0% | |
| CCAGTGATTGACTGGGATAA+GGG | - | chr3_1:19157954-19157973 | Msa0351780:intron | 45.0% | |
| ACCTCGCTCAAAACCTGTTA+CGG | + | chr3_1:19158273-19158292 | None:intergenic | 45.0% | |
| ! | AACCGCGTTGCTTTCTTTAG+GGG | + | chr3_1:19158328-19158347 | None:intergenic | 45.0% |
| CTCTCTTTGTGATCCTTCAG+AGG | - | chr3_1:19158350-19158369 | Msa0351780:intron | 45.0% | |
| CTTGTGGTATATGCAGGTCA+TGG | - | chr3_1:19158533-19158552 | Msa0351780:intron | 45.0% | |
| TAGGGACATAATAACCCCCT+TGG | + | chr3_1:19158837-19158856 | None:intergenic | 45.0% | |
| !! | TAATCAAAATTATATAAAAT+AGG | + | chr3_1:19159029-19159048 | None:intergenic | 5.0% |
| GTTGCAGTATCAGCAATGCG+AGG | + | chr3_1:19155825-19155844 | None:intergenic | 50.0% | |
| GTCCATCGCTAACGATTCCA+CGG | - | chr3_1:19155931-19155950 | Msa0351780:three_prime_UTR | 50.0% | |
| TTCCGTGGAATCGTTAGCGA+TGG | + | chr3_1:19155936-19155955 | None:intergenic | 50.0% | |
| GCAGCATCAGCTTCAGAAGA+TGG | + | chr3_1:19156065-19156084 | None:intergenic | 50.0% | |
| GTATGTGTTTCCTACCAGCC+AGG | + | chr3_1:19156096-19156115 | None:intergenic | 50.0% | |
| TCAAAGGCCCCAATTGCTGA+TGG | + | chr3_1:19156212-19156231 | None:intergenic | 50.0% | |
| ! | ACAGTGCTATTCGCCATTGC+AGG | + | chr3_1:19156355-19156374 | None:intergenic | 50.0% |
| ! | GCGTGCTGCTGTTAAAAGTG+TGG | - | chr3_1:19156455-19156474 | Msa0351780:intron | 50.0% |
| TAGCGGAAGAAGCCGTGAAA+AGG | - | chr3_1:19156503-19156522 | Msa0351780:intron | 50.0% | |
| AGCTCGACCTTGTAACCTCA+AGG | - | chr3_1:19156657-19156676 | Msa0351780:intron | 50.0% | |
| GCTCGACCTTGTAACCTCAA+GGG | - | chr3_1:19156658-19156677 | Msa0351780:intron | 50.0% | |
| CTTAGTGTTAGTGTCGTGCC+CGG | - | chr3_1:19157250-19157269 | Msa0351780:intron | 50.0% | |
| AGGTTCGACCAGTGATTGAC+TGG | - | chr3_1:19157946-19157965 | Msa0351780:intron | 50.0% | |
| GGTTCGACCAGTGATTGACT+GGG | - | chr3_1:19157947-19157966 | Msa0351780:intron | 50.0% | |
| CCCTTATCCCAGTCAATCAC+TGG | + | chr3_1:19157957-19157976 | None:intergenic | 50.0% | |
| !!! | ACCGTAACAGGTTTTGAGCG+AGG | - | chr3_1:19158269-19158288 | Msa0351780:intron | 50.0% |
| !! | ACAAGATCAAGGCTCGGTGC+AGG | - | chr3_1:19155855-19155874 | Msa0351780:three_prime_UTR | 55.0% |
| ! | GGAGAGCATGACAGACTCGA+AGG | + | chr3_1:19155885-19155904 | None:intergenic | 55.0% |
| ! | TCGGACATGAAAGCACGCTC+AGG | + | chr3_1:19156317-19156336 | None:intergenic | 55.0% |
| GCAGGAATTCAGCAGCAGGT+TGG | + | chr3_1:19157066-19157085 | None:intergenic | 55.0% | |
| ATCGGCAGGAATTCAGCAGC+AGG | + | chr3_1:19157070-19157089 | None:intergenic | 55.0% | |
| ! | CGCGTTGCTTTCTTTAGGGG+CGG | + | chr3_1:19158325-19158344 | None:intergenic | 55.0% |
| CGCCCCTAAAGAAAGCAACG+CGG | - | chr3_1:19158323-19158342 | Msa0351780:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 19155636 | 19159062 | 19155636 | ID=Msa0351780;Name=Msa0351780 |
| chr3_1 | mRNA | 19155636 | 19159062 | 19155636 | ID=Msa0351780-mRNA-1;Parent=Msa0351780;Name=Msa0351780-mRNA-1;_AED=0.14;_eAED=0.14;_QI=162|1|1|1|1|1|11|460|388 |
| chr3_1 | exon | 19155636 | 19156149 | 19155636 | ID=Msa0351780-mRNA-1:exon:4502;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19156327 | 19156419 | 19156327 | ID=Msa0351780-mRNA-1:exon:4501;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19156521 | 19156591 | 19156521 | ID=Msa0351780-mRNA-1:exon:4500;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19156690 | 19156759 | 19156690 | ID=Msa0351780-mRNA-1:exon:4499;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19156917 | 19156994 | 19156917 | ID=Msa0351780-mRNA-1:exon:4498;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19157277 | 19157378 | 19157277 | ID=Msa0351780-mRNA-1:exon:4497;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19157599 | 19157655 | 19157599 | ID=Msa0351780-mRNA-1:exon:4496;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19157775 | 19157900 | 19157775 | ID=Msa0351780-mRNA-1:exon:4495;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19158174 | 19158245 | 19158174 | ID=Msa0351780-mRNA-1:exon:4494;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19158358 | 19158498 | 19158358 | ID=Msa0351780-mRNA-1:exon:4493;Parent=Msa0351780-mRNA-1 |
| chr3_1 | exon | 19158598 | 19159062 | 19158598 | ID=Msa0351780-mRNA-1:exon:4492;Parent=Msa0351780-mRNA-1 |
| chr3_1 | five_prime_UTR | 19158901 | 19159062 | 19158901 | ID=Msa0351780-mRNA-1:five_prime_utr;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19158598 | 19158900 | 19158598 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19158358 | 19158498 | 19158358 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19158174 | 19158245 | 19158174 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19157775 | 19157900 | 19157775 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19157599 | 19157655 | 19157599 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19157277 | 19157378 | 19157277 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19156917 | 19156994 | 19156917 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19156690 | 19156759 | 19156690 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19156521 | 19156591 | 19156521 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19156327 | 19156419 | 19156327 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | CDS | 19156096 | 19156149 | 19156096 | ID=Msa0351780-mRNA-1:cds;Parent=Msa0351780-mRNA-1 |
| chr3_1 | three_prime_UTR | 19155636 | 19156095 | 19155636 | ID=Msa0351780-mRNA-1:three_prime_utr;Parent=Msa0351780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
