AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1338580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338580 MtrunA17_Chr7g0276591 95.502 289 11 2 1 287 1 289 2.34e-144 407
Msa1338580 MtrunA17_Chr8g0345361 43.458 214 97 5 10 199 15 228 1.47e-49 164
Msa1338580 MtrunA17_Chr2g0295571 33.083 266 137 7 14 264 23 262 4.46e-31 117
Msa1338580 MtrunA17_Chr4g0067591 42.405 158 68 4 9 149 2 153 1.41e-27 107
Msa1338580 MtrunA17_Chr1g0191601 34.667 150 89 3 6 149 30 176 2.99e-23 97.8
Msa1338580 MtrunA17_Chr3g0113811 32.051 156 92 5 2 149 6 155 1.82e-22 91.7
Msa1338580 MtrunA17_Chr3g0128771 35.156 128 77 2 25 149 44 168 2.02e-22 91.7
Msa1338580 MtrunA17_Chr6g0486651 37.126 167 86 5 24 172 41 206 2.34e-22 95.5
Msa1338580 MtrunA17_Chr1g0167811 34.783 138 74 4 27 148 34 171 6.99e-22 93.2
Msa1338580 MtrunA17_Chr7g0273051 37.984 129 65 4 33 149 44 169 1.76e-21 92.8
Msa1338580 MtrunA17_Chr5g0409211 35.878 131 75 3 27 149 14 143 1.90e-21 89.0
Msa1338580 MtrunA17_Chr3g0105441 48.276 87 40 1 75 156 102 188 2.29e-21 90.9
Msa1338580 MtrunA17_Chr5g0426881 32.394 142 64 4 23 146 62 189 5.87e-21 91.7
Msa1338580 MtrunA17_Chr7g0244851 32.768 177 103 4 1 176 10 171 6.06e-21 87.8
Msa1338580 MtrunA17_Chr5g0407431 35.433 127 73 2 25 148 33 153 2.21e-20 87.0
Msa1338580 MtrunA17_Chr1g0186661 41.584 101 46 2 61 148 79 179 3.34e-20 89.0
Msa1338580 MtrunA17_Chr8g0383881 46.591 88 36 2 75 151 103 190 5.21e-20 86.3
Msa1338580 MtrunA17_Chr8g0383861 46.591 88 36 2 75 151 113 200 7.31e-20 85.9
Msa1338580 MtrunA17_Chr3g0133001 44.565 92 42 3 71 159 126 211 1.20e-19 88.2
Msa1338580 MtrunA17_Chr4g0059281 27.907 215 127 6 23 213 39 249 1.32e-19 86.7
Msa1338580 MtrunA17_Chr2g0325161 43.902 82 39 1 75 149 91 172 1.58e-19 85.5
Msa1338580 MtrunA17_Chr3g0118061 38.261 115 67 2 35 145 35 149 2.18e-19 84.3
Msa1338580 MtrunA17_Chr4g0073141 36.496 137 74 4 41 165 78 213 2.33e-19 87.8
Msa1338580 MtrunA17_Chr8g0383871 48.684 76 37 1 75 148 112 187 3.18e-19 84.3
Msa1338580 MtrunA17_Chr8g0370171 33.600 125 74 2 25 146 26 144 3.43e-19 83.6
Msa1338580 MtrunA17_Chr5g0413841 34.756 164 78 7 7 147 32 189 4.08e-19 86.3
Msa1338580 MtrunA17_Chr8g0383921 48.684 76 37 1 75 148 111 186 4.16e-19 83.6
Msa1338580 MtrunA17_Chr8g0383941 31.788 151 92 3 2 148 39 182 5.23e-19 83.6
Msa1338580 MtrunA17_Chr6g0451161 38.732 142 71 6 15 145 68 204 1.06e-18 85.1
Msa1338580 MtrunA17_Chr5g0430781 51.471 68 31 1 75 142 87 152 1.39e-18 82.4
Msa1338580 MtrunA17_Chr2g0327791 45.333 75 38 1 72 143 104 178 1.49e-18 82.4
Msa1338580 MtrunA17_Chr4g0050041 31.884 138 78 2 28 149 64 201 1.96e-18 84.3
Msa1338580 MtrunA17_Chr3g0123631 28.472 144 93 2 24 163 1 138 2.60e-18 80.9
Msa1338580 MtrunA17_Chr3g0126931 33.333 144 75 4 75 217 101 224 2.61e-18 84.0
Msa1338580 MtrunA17_Chr5g0411081 42.857 105 45 4 75 177 122 213 2.72e-18 84.0
Msa1338580 MtrunA17_Chr3g0118071 34.921 126 75 3 27 145 24 149 3.46e-18 81.3
Msa1338580 MtrunA17_Chr4g0010171 34.074 135 84 3 13 147 31 160 3.84e-18 80.5
Msa1338580 MtrunA17_Chr5g0437361 38.095 105 61 2 44 145 45 148 4.78e-18 79.7
Msa1338580 MtrunA17_Chr5g0409201 32.061 131 80 3 25 149 15 142 5.11e-18 79.3
Msa1338580 MtrunA17_Chr2g0279431 44.444 81 44 1 75 154 135 215 5.76e-18 83.2
Msa1338580 MtrunA17_Chr8g0381731 43.820 89 49 1 75 162 148 236 6.05e-18 82.0
Msa1338580 MtrunA17_Chr5g0433861 33.846 130 79 3 26 149 27 155 6.62e-18 82.0
Msa1338580 MtrunA17_Chr2g0325141 30.075 133 80 2 24 143 2 134 6.90e-18 78.6
Msa1338580 MtrunA17_Chr4g0030831 52.113 71 31 2 75 142 84 154 6.94e-18 79.3
Msa1338580 MtrunA17_Chr5g0426781 47.297 74 38 1 75 147 128 201 7.11e-18 82.4
Msa1338580 MtrunA17_Chr3g0129671 59.649 57 23 0 92 148 128 184 8.97e-18 80.5
Msa1338580 MtrunA17_Chr3g0132491 32.353 136 76 4 23 149 57 185 9.43e-18 82.4
Msa1338580 MtrunA17_Chr6g0470751 30.270 185 94 5 15 195 48 201 1.01e-17 81.6
Msa1338580 MtrunA17_Chr3g0144241 31.618 136 83 3 25 151 29 163 1.10e-17 79.3
Msa1338580 MtrunA17_Chr1g0203541 44.156 77 37 1 75 145 105 181 1.20e-17 79.3
Msa1338580 MtrunA17_Chr8g0366521 32.824 131 79 4 26 149 27 155 1.29e-17 81.3
Msa1338580 MtrunA17_Chr3g0123641 28.472 144 93 2 24 163 1 138 1.34e-17 80.1
Msa1338580 MtrunA17_Chr8g0383901 58.491 53 22 0 96 148 127 179 1.40e-17 79.7
Msa1338580 MtrunA17_Chr2g0297011 43.902 82 40 2 65 145 71 147 2.07e-17 77.8
Msa1338580 MtrunA17_Chr8g0383931 58.491 53 22 0 96 148 137 189 2.18e-17 79.3
Msa1338580 MtrunA17_Chr1g0197031 29.221 154 95 4 17 163 19 165 2.62e-17 77.4
Msa1338580 MtrunA17_Chr2g0307411 43.421 76 41 1 75 150 77 150 3.19e-17 78.2
Msa1338580 MtrunA17_Chr5g0427431 45.946 74 35 2 75 145 134 205 3.31e-17 81.3
Msa1338580 MtrunA17_Chr8g0364881 47.945 73 35 2 75 145 68 139 3.34e-17 80.5
Msa1338580 MtrunA17_Chr4g0013561 40.741 81 48 0 75 155 85 165 4.17e-17 78.6
Msa1338580 MtrunA17_Chr2g0300331 61.538 52 20 0 92 143 161 212 4.79e-17 78.6
Msa1338580 MtrunA17_Chr5g0426871 33.083 133 70 4 33 149 57 186 7.61e-17 79.7
Msa1338580 MtrunA17_Chr1g0197021 31.293 147 87 5 12 149 7 148 8.63e-17 75.9
Msa1338580 MtrunA17_Chr8g0366561 30.723 166 99 4 11 162 45 208 1.08e-16 79.3
Msa1338580 MtrunA17_Chr7g0274741 39.744 78 43 1 73 146 68 145 1.13e-16 76.3
Msa1338580 MtrunA17_Chr1g0184171 28.571 161 102 3 16 163 33 193 1.71e-16 78.6
Msa1338580 MtrunA17_Chr7g0269491 52.857 70 30 2 76 142 67 136 2.12e-16 75.9
Msa1338580 MtrunA17_Chr7g0274721 46.377 69 37 0 75 143 68 136 3.66e-16 74.7
Msa1338580 MtrunA17_Chr8g0336881 34.532 139 81 3 15 145 14 150 7.59e-16 76.3
Msa1338580 MtrunA17_Chr7g0246761 39.726 73 42 1 75 145 63 135 1.05e-15 73.9
Msa1338580 MtrunA17_Chr7g0274711 42.667 75 39 1 75 145 67 141 1.95e-15 72.8
Msa1338580 MtrunA17_Chr1g0184631 42.667 75 39 1 75 145 68 142 2.64e-15 72.4
Msa1338580 MtrunA17_Chr4g0027761 41.096 73 41 1 75 147 100 170 2.91e-15 72.8
Msa1338580 MtrunA17_Chr5g0406031 53.571 56 26 0 90 145 179 234 3.10e-15 73.6
Msa1338580 MtrunA17_Chr3g0143301 32.773 119 73 2 27 145 5 116 3.32e-15 70.9
Msa1338580 MtrunA17_Chr8g0345401 55.319 47 21 0 100 146 49 95 4.45e-15 70.9
Msa1338580 MtrunA17_Chr8g0350741 39.024 82 44 2 68 145 55 134 4.64e-15 71.6
Msa1338580 MtrunA17_Chr8g0345381 57.447 47 20 0 100 146 53 99 5.53e-15 70.9
Msa1338580 MtrunA17_Chr7g0274731 44.928 69 38 0 75 143 89 157 1.17e-14 70.9
Msa1338580 MtrunA17_Chr1g0177041 36.667 90 53 1 75 160 74 163 1.97e-14 69.7
Msa1338580 MtrunA17_Chr3g0120011 39.130 92 54 1 59 148 76 167 2.43e-14 70.5
Msa1338580 MtrunA17_Chr4g0052671 43.662 71 37 1 75 142 78 148 3.22e-14 68.9
Msa1338580 MtrunA17_Chr6g0451051 31.667 120 71 3 29 147 4 113 4.69e-14 68.6
Msa1338580 MtrunA17_Chr8g0348151 34.314 102 66 1 75 176 90 190 7.14e-14 68.9
Msa1338580 MtrunA17_Chr7g0261091 22.845 232 157 8 24 235 10 239 7.37e-14 70.9
Msa1338580 MtrunA17_Chr8g0371291 47.887 71 34 1 75 145 158 225 1.33e-13 68.6
Msa1338580 MtrunA17_Chr8g0369571 48.438 64 31 1 100 163 90 151 1.50e-13 67.8
Msa1338580 MtrunA17_Chr3g0081611 29.193 161 96 5 22 172 22 174 1.54e-13 67.4
Msa1338580 MtrunA17_Chr7g0248841 38.158 76 42 1 75 145 74 149 1.76e-13 67.0
Msa1338580 MtrunA17_Chr6g0451031 28.571 126 81 3 30 155 8 124 2.89e-13 65.5
Msa1338580 MtrunA17_Chr1g0157091 40.541 74 42 1 75 148 48 119 3.28e-13 65.5
Msa1338580 MtrunA17_Chr3g0124531 54.237 59 21 3 99 156 68 121 1.07e-12 64.7
Msa1338580 MtrunA17_Chr1g0198201 36.986 73 44 1 75 145 61 133 1.09e-12 66.2
Msa1338580 MtrunA17_Chr7g0237871 53.191 47 22 0 99 145 157 203 1.24e-12 66.2
Msa1338580 MtrunA17_Chr5g0444161 41.892 74 40 2 75 145 157 230 1.56e-12 65.9
Msa1338580 MtrunA17_Chr3g0117821 30.645 124 81 3 25 143 5 128 1.81e-12 63.9
Msa1338580 MtrunA17_Chr5g0396601 45.070 71 36 2 75 142 322 392 3.48e-12 66.2
Msa1338580 MtrunA17_Chr8g0369691 41.558 77 37 4 80 151 423 496 3.76e-12 66.2
Msa1338580 MtrunA17_Chr8g0388201 52.174 46 22 0 97 142 344 389 3.90e-12 66.2
Msa1338580 MtrunA17_Chr5g0396611 55.319 47 21 0 96 142 336 382 4.39e-12 65.9
Msa1338580 MtrunA17_Chr7g0248831 35.897 78 47 1 75 149 80 157 4.44e-12 63.5
Msa1338580 MtrunA17_Chr4g0060981 38.235 68 42 0 75 142 149 216 4.50e-12 64.3
Msa1338580 MtrunA17_Chr2g0301871 48.000 50 26 0 99 148 82 131 4.51e-12 65.1
Msa1338580 MtrunA17_Chr5g0444141 42.667 75 40 2 75 146 192 266 5.09e-12 64.7
Msa1338580 MtrunA17_Chr5g0396591 45.070 71 36 2 75 142 212 282 6.19e-12 64.7
Msa1338580 MtrunA17_Chr5g0427771 54.902 51 19 3 97 145 56 104 1.00e-11 61.6
Msa1338580 MtrunA17_Chr5g0427781 54.902 51 19 3 97 145 56 104 1.04e-11 61.6
Msa1338580 MtrunA17_Chr8g0343571 49.057 53 27 0 99 151 84 136 1.19e-11 62.0
Msa1338580 MtrunA17_Chr3g0118091 33.803 71 45 1 75 143 40 110 1.30e-11 60.8
Msa1338580 MtrunA17_Chr4g0031911 48.276 58 27 2 90 147 201 255 1.54e-11 63.5
Msa1338580 MtrunA17_Chr4g0031921 48.276 58 27 2 90 147 201 255 2.21e-11 63.2
Msa1338580 MtrunA17_Chr7g0248101 43.284 67 34 2 84 146 71 137 2.49e-11 61.2
Msa1338580 MtrunA17_Chr5g0408871 42.424 66 34 3 80 142 483 547 2.77e-11 63.9
Msa1338580 MtrunA17_Chr3g0118101 36.986 73 42 2 75 144 87 158 2.78e-11 61.2
Msa1338580 MtrunA17_Chr8g0388231 40.845 71 39 1 75 142 309 379 3.41e-11 63.2
Msa1338580 MtrunA17_Chr1g0169651 39.437 71 40 2 75 145 660 727 3.52e-11 63.5
Msa1338580 MtrunA17_Chr1g0171061 48.387 62 24 4 97 156 54 109 4.16e-11 59.7
Msa1338580 MtrunA17_Chr2g0317671 31.373 102 58 3 51 145 108 204 5.96e-11 60.8
Msa1338580 MtrunA17_Chr4g0039541 45.000 60 27 3 90 146 50 106 7.59e-11 58.9
Msa1338580 MtrunA17_Chr8g0347101 48.000 50 26 0 100 149 314 363 9.41e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1338580 AT1G72310.1 32.248 307 156 8 1 260 1 302 2.88e-43 150
Msa1338580 AT1G53820.1 32.517 286 136 8 22 256 22 301 4.81e-37 134
Msa1338580 AT3G16720.1 33.444 302 144 9 8 277 14 290 6.35e-37 133
Msa1338580 AT3G62690.1 35.102 245 135 7 20 254 24 254 1.15e-28 110
Msa1338580 AT4G15975.1 58.333 72 30 0 74 145 50 121 3.56e-26 103
Msa1338580 AT4G40070.1 43.548 124 61 3 32 147 49 171 5.83e-26 104
Msa1338580 AT2G47560.1 41.429 140 75 3 20 155 24 160 1.43e-24 99.0
Msa1338580 AT3G14320.1 55.556 72 32 0 71 142 59 130 5.69e-23 94.4
Msa1338580 AT2G42360.1 29.091 220 140 6 7 222 13 220 2.57e-21 90.5
Msa1338580 AT4G09110.1 32.727 165 93 5 3 162 34 185 5.42e-21 90.9
Msa1338580 AT1G23980.1 33.750 160 82 5 9 145 31 189 9.24e-21 91.3
Msa1338580 AT5G17600.1 37.903 124 71 2 67 184 108 231 1.47e-20 90.5
Msa1338580 AT5G57750.1 32.353 170 92 6 25 172 31 199 1.79e-20 87.8
Msa1338580 AT2G35000.1 34.351 131 77 3 25 146 51 181 2.98e-20 90.1
Msa1338580 AT2G34990.2 32.414 145 89 4 17 155 32 173 3.04e-20 89.4
Msa1338580 AT2G34990.1 33.094 139 84 4 17 149 10 145 3.05e-20 89.0
Msa1338580 AT3G05200.1 33.333 126 80 1 25 146 49 174 3.17e-20 90.1
Msa1338580 AT2G20030.1 36.765 136 69 4 16 142 39 166 5.46e-20 89.4
Msa1338580 AT5G43420.1 39.316 117 44 3 65 154 78 194 7.02e-20 89.0
Msa1338580 AT5G27420.1 33.333 144 87 2 28 167 53 191 7.08e-20 88.6
Msa1338580 AT1G49220.1 33.333 132 85 2 19 148 53 183 8.00e-20 86.7
Msa1338580 AT5G46650.1 31.126 151 89 4 25 160 25 175 8.06e-20 87.4
Msa1338580 AT1G72220.1 33.793 145 85 4 12 146 80 223 1.75e-19 88.2
Msa1338580 AT1G72200.1 33.333 147 80 5 25 160 63 202 2.21e-19 87.8
Msa1338580 AT5G05280.1 32.558 129 84 1 25 153 41 166 3.20e-19 83.6
Msa1338580 AT4G17905.1 36.585 123 71 3 74 191 126 246 3.37e-19 86.3
Msa1338580 AT3G18773.1 32.576 132 87 1 19 148 47 178 3.68e-19 84.3
Msa1338580 AT1G76410.1 32.800 125 82 1 26 148 28 152 4.71e-19 83.2
Msa1338580 AT4G17905.2 36.585 123 71 3 74 191 152 272 4.90e-19 85.9
Msa1338580 AT2G42350.1 33.758 157 83 3 7 150 2 150 5.01e-19 84.0
Msa1338580 AT4G10150.1 32.258 155 87 3 31 169 32 184 8.93e-19 83.6
Msa1338580 AT3G19140.1 34.884 129 74 3 33 153 14 140 9.44e-19 81.3
Msa1338580 AT5G10380.1 50.633 79 37 2 75 151 109 187 1.49e-18 84.3
Msa1338580 AT2G27940.1 35.878 131 72 3 24 143 54 183 1.51e-18 83.2
Msa1338580 AT3G10910.1 33.333 132 82 2 25 150 33 164 2.12e-18 81.3
Msa1338580 AT1G20823.1 35.211 142 80 4 15 145 16 156 2.19e-18 81.6
Msa1338580 AT5G01880.1 48.611 72 36 1 75 145 79 150 2.30e-18 80.5
Msa1338580 AT1G04360.1 40.777 103 42 3 64 147 79 181 2.40e-18 84.7
Msa1338580 AT4G17920.1 26.389 216 136 6 24 218 25 238 2.67e-18 83.2
Msa1338580 AT5G05810.1 48.000 75 34 2 71 142 116 188 3.22e-18 84.3
Msa1338580 AT2G17450.1 31.783 129 71 2 25 145 28 147 4.35e-18 80.5
Msa1338580 AT3G03550.1 47.126 87 39 3 76 160 134 215 5.77e-18 83.2
Msa1338580 AT4G30400.1 42.424 99 50 2 75 166 107 205 8.22e-18 83.6
Msa1338580 AT1G49200.1 30.303 132 89 2 19 148 54 184 9.09e-18 80.5
Msa1338580 AT4G33565.1 50.000 74 34 2 75 146 191 263 1.06e-17 82.4
Msa1338580 AT2G18650.1 37.410 139 70 6 41 164 59 195 1.26e-17 82.8
Msa1338580 AT4G28890.1 52.174 69 32 1 75 142 97 165 1.48e-17 82.4
Msa1338580 AT1G33480.1 36.066 122 69 2 31 145 26 145 1.68e-17 80.5
Msa1338580 AT4G10160.1 38.614 101 54 2 75 169 72 170 2.09e-17 79.7
Msa1338580 AT1G49210.1 31.061 132 88 2 19 148 53 183 2.38e-17 79.3
Msa1338580 AT2G35420.1 30.405 148 93 3 7 145 2 148 3.43e-17 79.7
Msa1338580 AT1G32361.1 43.243 74 41 1 72 145 127 199 7.74e-17 79.7
Msa1338580 AT1G35330.1 33.333 141 66 5 26 149 49 178 1.03e-16 79.3
Msa1338580 AT5G40250.1 35.099 151 74 5 15 145 42 188 1.04e-16 79.7
Msa1338580 AT3G48030.1 42.105 76 42 1 75 148 180 255 1.50e-16 79.0
Msa1338580 AT3G48030.2 42.105 76 42 1 75 148 102 177 1.64e-16 78.2
Msa1338580 AT4G09120.1 35.294 136 69 5 62 192 88 209 2.00e-16 78.6
Msa1338580 AT1G49230.1 57.407 54 23 0 95 148 126 179 2.96e-16 76.3
Msa1338580 AT3G11110.1 32.867 143 90 4 5 145 14 152 3.68e-16 74.7
Msa1338580 AT3G18930.2 42.683 82 36 2 75 145 120 201 6.80e-16 77.8
Msa1338580 AT3G18930.3 42.683 82 36 2 75 145 120 201 6.80e-16 77.8
Msa1338580 AT3G18930.1 42.683 82 36 2 75 145 120 201 6.80e-16 77.8
Msa1338580 AT1G22500.1 44.304 79 40 2 75 149 89 167 1.31e-15 76.6
Msa1338580 AT4G09100.1 40.789 76 41 2 75 146 56 131 4.22e-15 70.9
Msa1338580 AT3G61550.1 37.500 88 43 1 74 149 98 185 6.66e-15 72.4
Msa1338580 AT2G44578.1 29.545 132 72 2 26 157 17 127 7.22e-15 70.9
Msa1338580 AT1G74410.1 37.363 91 56 1 53 142 128 218 1.02e-14 72.0
Msa1338580 AT2G35910.1 38.298 94 55 2 75 166 121 213 3.18e-14 70.5
Msa1338580 AT2G34000.1 33.600 125 64 4 25 142 21 133 3.37e-14 68.9
Msa1338580 AT3G60966.1 50.000 58 29 0 100 157 62 119 3.45e-14 68.6
Msa1338580 AT2G44581.1 29.600 125 67 2 26 150 17 120 4.33e-14 68.6
Msa1338580 AT3G60220.1 47.297 74 35 2 79 148 92 165 5.69e-14 71.6
Msa1338580 AT5G66070.5 58.696 46 19 0 100 145 176 221 6.39e-14 69.7
Msa1338580 AT5G66070.1 58.696 46 19 0 100 145 176 221 6.39e-14 69.7
Msa1338580 AT5G47610.1 28.099 121 75 3 27 145 42 152 8.14e-14 68.6
Msa1338580 AT5G58580.1 46.053 76 39 1 75 148 111 186 9.83e-14 70.5
Msa1338580 AT5G66070.2 58.696 46 19 0 100 145 200 245 1.04e-13 69.7
Msa1338580 AT2G46160.1 36.905 84 44 1 75 149 104 187 1.24e-13 68.9
Msa1338580 AT2G46160.2 36.905 84 44 1 75 149 104 187 1.24e-13 68.9
Msa1338580 AT4G24015.1 40.299 67 40 0 82 148 87 153 1.50e-13 67.8
Msa1338580 AT5G06490.1 45.763 59 32 0 100 158 129 187 1.55e-13 68.2
Msa1338580 AT4G35480.1 53.191 47 22 0 99 145 112 158 2.36e-13 67.8
Msa1338580 AT2G46493.1 51.064 47 23 0 100 146 138 184 2.65e-13 67.4
Msa1338580 AT4G09130.1 39.474 76 42 1 75 146 91 166 2.78e-13 69.7
Msa1338580 AT4G35840.1 56.522 46 20 0 100 145 191 236 4.47e-13 67.8
Msa1338580 AT5G07040.1 41.250 80 38 3 75 148 66 142 8.21e-13 65.5
Msa1338580 AT2G17730.1 58.140 43 18 0 100 142 196 238 1.24e-12 66.6
Msa1338580 AT3G20395.1 33.000 100 66 1 47 146 119 217 1.86e-12 65.9
Msa1338580 AT2G46495.2 40.278 72 39 1 75 142 263 334 2.66e-12 66.6
Msa1338580 AT2G25410.1 53.191 47 22 0 97 143 324 370 2.72e-12 67.0
Msa1338580 AT4G17245.1 49.123 57 28 1 95 150 97 153 3.06e-12 63.9
Msa1338580 AT2G46495.1 52.174 46 22 0 97 142 317 362 3.16e-12 66.6
Msa1338580 AT5G42200.1 30.370 135 77 4 24 150 29 154 3.70e-12 63.5
Msa1338580 AT2G46494.1 53.191 47 22 0 100 146 316 362 4.22e-12 66.2
Msa1338580 AT1G28040.1 53.488 43 20 0 100 142 253 295 5.65e-12 65.5
Msa1338580 AT5G53110.1 38.554 83 44 2 75 152 302 382 9.60e-12 65.1
Msa1338580 AT4G38140.1 44.928 69 36 2 88 154 50 118 1.01e-11 62.0
Msa1338580 AT5G66160.1 34.400 125 64 7 22 142 164 274 3.38e-11 63.2
Msa1338580 AT4G30370.1 41.429 70 38 2 75 142 89 157 3.64e-11 61.2
Msa1338580 AT1G53010.1 51.064 47 23 0 99 145 129 175 3.77e-11 61.2
Msa1338580 AT4G35840.2 46.552 58 29 1 90 145 211 268 3.81e-11 62.8
Msa1338580 AT5G24870.3 33.735 83 46 3 77 151 437 518 4.10e-11 63.5
Msa1338580 AT5G24870.1 33.735 83 46 3 77 151 437 518 4.10e-11 63.5
Msa1338580 AT5G24870.2 33.735 83 46 3 77 151 437 518 4.10e-11 63.5
Msa1338580 AT5G66160.2 32.143 140 77 7 22 157 164 289 4.45e-11 62.8
Msa1338580 AT5G36001.1 45.283 53 29 0 97 149 261 313 6.39e-11 62.4
Msa1338580 AT1G22670.1 26.190 126 72 4 20 142 167 274 7.61e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCACAAATGTCTTGATT+TGG 0.239718 tig0002269:-23251 Msa1338580:CDS
TCCCACAAATGTCTTGATTT+GGG 0.251331 tig0002269:-23250 Msa1338580:CDS
CTTCCTTTGGCTTTGTTTGT+TGG 0.258583 tig0002269:+22941 None:intergenic
AAAAGAAGATGGTTTGGATT+TGG 0.260868 tig0002269:-23493 Msa1338580:CDS
ATGAAGAAGAAGAGGTTATT+TGG 0.277891 tig0002269:+23217 None:intergenic
CATCATCATTCTTCTCTTCA+TGG 0.279773 tig0002269:-23685 Msa1338580:CDS
CTTTGTCCTGCTGCTTCCTT+TGG 0.292845 tig0002269:+22928 None:intergenic
GACCACTACGCCGGCGCCTT+CGG 0.293588 tig0002269:+23577 None:intergenic
ACCACTACGCCGGCGCCTTC+GGG 0.297711 tig0002269:+23578 None:intergenic
ACTCAACCTGCCCTCTTTGC+AGG 0.327511 tig0002269:-23362 Msa1338580:CDS
TGAAACATGTGATTGCATTT+AGG 0.347113 tig0002269:+23417 None:intergenic
AAGTGGGACTCCAAGGATTC+AGG 0.364051 tig0002269:+22974 None:intergenic
CCTTTGGCTTTGTTTGTTGG+TGG 0.400584 tig0002269:+22944 None:intergenic
CAATTCAAAAGAAGATGGTT+TGG 0.404245 tig0002269:-23499 Msa1338580:CDS
CCCCAAATCAAGACATTTGT+GGG 0.412724 tig0002269:+23249 None:intergenic
TTCTTCTTCATCTACTACTT+CGG 0.413687 tig0002269:-23205 Msa1338580:CDS
AAGAAGAGGTTATTTGGTTG+TGG 0.426627 tig0002269:+23223 None:intergenic
TGCAAAGAGGGCAGGTTGAG+TGG 0.431294 tig0002269:+23364 None:intergenic
TTTGAATTGAATATTGATAT+GGG 0.436624 tig0002269:+23513 None:intergenic
TCCCCAGCCGTTGATATAAC+CGG 0.439273 tig0002269:-23723 Msa1338580:CDS
ATTTATAGTATTATCACCAT+TGG 0.441813 tig0002269:+23158 None:intergenic
GTATAATGAGCCTGAATCCT+TGG 0.447061 tig0002269:-22984 Msa1338580:CDS
ATCATCATCACCCTTAGCTT+CGG 0.447612 tig0002269:-23058 Msa1338580:CDS
AGACGTGATGATGAAGGAAA+TGG 0.450213 tig0002269:-23126 Msa1338580:CDS
ATGAAGGAAATGGAATGTTA+AGG 0.450806 tig0002269:-23116 Msa1338580:CDS
CTCCTTCAACCACTTCCGAC+AGG 0.455690 tig0002269:+23457 None:intergenic
TTCAACAATGAGTGACTCAT+TGG 0.456625 tig0002269:-23772 None:intergenic
TTGCCGGTTATATCAACGGC+TGG 0.471787 tig0002269:+23720 None:intergenic
ACATAGATTGCATTGATATG+TGG 0.473099 tig0002269:-23395 Msa1338580:CDS
TCTCCCTTCTGCCGAAGCTA+AGG 0.473267 tig0002269:+23047 None:intergenic
GATGACCACCATGATCTTGC+CGG 0.486374 tig0002269:+23704 None:intergenic
GAGGGCAGGTTGAGTGGGAA+TGG 0.488860 tig0002269:+23370 None:intergenic
TGATATAACCGGCAAGATCA+TGG 0.493165 tig0002269:-23712 Msa1338580:CDS
CAAGAGTTGTCCTGCAAAGA+GGG 0.497859 tig0002269:+23352 None:intergenic
ATATTCAATTCAAAAGAAGA+TGG 0.498801 tig0002269:-23504 Msa1338580:CDS
GCCCCAAATCAAGACATTTG+TGG 0.499916 tig0002269:+23248 None:intergenic
TTCAGTTTGCCTGTCGGAAG+TGG 0.506863 tig0002269:-23466 Msa1338580:CDS
TGCCTGTCGGAAGTGGTTGA+AGG 0.509140 tig0002269:-23459 Msa1338580:CDS
CTCCCTTCTGCCGAAGCTAA+GGG 0.510155 tig0002269:+23048 None:intergenic
TGCCGGTTATATCAACGGCT+GGG 0.511321 tig0002269:+23721 None:intergenic
GGAGATTAAAGTCATTAAAG+AGG 0.519320 tig0002269:-23029 Msa1338580:CDS
CCCACAAATGTCTTGATTTG+GGG 0.521017 tig0002269:-23249 Msa1338580:CDS
TCACCCTTAGCTTCGGCAGA+AGG 0.534028 tig0002269:-23051 Msa1338580:CDS
GGAAGTGGTTGAAGGAGAAA+AGG 0.536011 tig0002269:-23451 Msa1338580:CDS
AATTGAATATTGATATGGGT+AGG 0.538423 tig0002269:+23517 None:intergenic
ATTGAATATTGATATGGGTA+GGG 0.539693 tig0002269:+23518 None:intergenic
AGTAGTAGATGAAGAAGAAG+AGG 0.542343 tig0002269:+23209 None:intergenic
ACAAAGCCAAAGGAAGCAGC+AGG 0.543151 tig0002269:-22934 Msa1338580:CDS
TATGGGTAGGGAGTTGAGTA+CGG 0.544287 tig0002269:+23530 None:intergenic
ATTCCCAATCCCGAAGGCGC+CGG 0.547400 tig0002269:-23587 Msa1338580:CDS
CTGAGTCCACCAGAATCCCT+TGG 0.552402 tig0002269:+23629 None:intergenic
CACCCTTAGCTTCGGCAGAA+GGG 0.553724 tig0002269:-23050 Msa1338580:CDS
AGTTGTCCTGCAAAGAGGGC+AGG 0.569356 tig0002269:+23356 None:intergenic
GCCGGTTATATCAACGGCTG+GGG 0.570359 tig0002269:+23722 None:intergenic
GCGCCGGCGTAGTGGTCAAG+AGG 0.575061 tig0002269:-23571 Msa1338580:CDS
ACAGTAGAAGTGGGACTCCA+AGG 0.579015 tig0002269:+22967 None:intergenic
GCAAAGAGGGCAGGTTGAGT+GGG 0.580151 tig0002269:+23365 None:intergenic
AGCAACAGACGTGATGATGA+AGG 0.580501 tig0002269:-23132 Msa1338580:CDS
TGTTAAGGATTGATATACCC+AGG 0.588607 tig0002269:-23101 Msa1338580:CDS
TGGTTGAAGGAGAAAAGGTG+AGG 0.589581 tig0002269:-23446 Msa1338580:CDS
GTAGTCGCCTCACACTCCCT+GGG 0.592494 tig0002269:+23084 None:intergenic
GATCTTGCCGGTTATATCAA+CGG 0.596991 tig0002269:+23716 None:intergenic
ACTACTACTGAGGAGGGAGG+AGG 0.600788 tig0002269:+23321 None:intergenic
GGTTGAAGGAGAAAAGGTGA+GGG 0.600820 tig0002269:-23445 Msa1338580:CDS
CGTAGTGGTCAAGAGGGTGG+TGG 0.601585 tig0002269:-23564 Msa1338580:CDS
TGATATACCCAGGGAGTGTG+AGG 0.605794 tig0002269:-23091 Msa1338580:CDS
CGGCGTAGTGGTCAAGAGGG+TGG 0.605954 tig0002269:-23567 Msa1338580:CDS
GGTAGGGAGTTGAGTACGGA+AGG 0.610522 tig0002269:+23534 None:intergenic
GCAAGAGTTGTCCTGCAAAG+AGG 0.611110 tig0002269:+23351 None:intergenic
GATTCTGGTGGACTCAGAGT+CGG 0.614221 tig0002269:-23623 Msa1338580:CDS
GGAGTGTTCAGTTTGCCTGT+CGG 0.621399 tig0002269:-23472 Msa1338580:CDS
CGCCGGCGTAGTGGTCAAGA+GGG 0.635932 tig0002269:-23570 Msa1338580:CDS
ACTTCTTCATCGTCATCCAA+TGG 0.639103 tig0002269:-23174 Msa1338580:CDS
CCACCAACAAACAAAGCCAA+AGG 0.647496 tig0002269:-22944 Msa1338580:CDS
TTGTTGGTGGACAGTAGAAG+TGG 0.657228 tig0002269:+22957 None:intergenic
GTTAAGGATTGATATACCCA+GGG 0.671073 tig0002269:-23100 Msa1338580:CDS
ACTACTACTACTGAGGAGGG+AGG 0.677091 tig0002269:+23318 None:intergenic
ACAACAATTCCCAATCCCGA+AGG 0.678435 tig0002269:-23593 Msa1338580:CDS
TGTTGGTGGACAGTAGAAGT+GGG 0.714380 tig0002269:+22958 None:intergenic
TATAACCGGCAAGATCATGG+TGG 0.759577 tig0002269:-23709 Msa1338580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGAATTGAATATTGATAT+GGG + tig0002269:23179-23198 None:intergenic 15.0%
!!! TTTTGAATTGAATATTGATA+TGG + tig0002269:23180-23199 None:intergenic 15.0%
!! TTTGAATTGAATATTGATAT+GGG + tig0002269:23179-23198 None:intergenic 15.0%
!!! TTTTGAATTGAATATTGATA+TGG + tig0002269:23180-23199 None:intergenic 15.0%
!! ATATTCAATTCAAAAGAAGA+TGG - tig0002269:23185-23204 Msa1338580:CDS 20.0%
!! ATTTATAGTATTATCACCAT+TGG + tig0002269:23534-23553 None:intergenic 20.0%
!! ATATTCAATTCAAAAGAAGA+TGG - tig0002269:23185-23204 Msa1338580:CDS 20.0%
!! ATTTATAGTATTATCACCAT+TGG + tig0002269:23534-23553 None:intergenic 20.0%
! ATTGAATATTGATATGGGTA+GGG + tig0002269:23174-23193 None:intergenic 25.0%
! AATTGAATATTGATATGGGT+AGG + tig0002269:23175-23194 None:intergenic 25.0%
! ATTGAATATTGATATGGGTA+GGG + tig0002269:23174-23193 None:intergenic 25.0%
! AATTGAATATTGATATGGGT+AGG + tig0002269:23175-23194 None:intergenic 25.0%
CAATTCAAAAGAAGATGGTT+TGG - tig0002269:23190-23209 Msa1338580:CDS 30.0%
! AAAAGAAGATGGTTTGGATT+TGG - tig0002269:23196-23215 Msa1338580:CDS 30.0%
TGAAACATGTGATTGCATTT+AGG + tig0002269:23275-23294 None:intergenic 30.0%
! ACATAGATTGCATTGATATG+TGG - tig0002269:23294-23313 Msa1338580:CDS 30.0%
ATGAAGAAGAAGAGGTTATT+TGG + tig0002269:23475-23494 None:intergenic 30.0%
TTCTTCTTCATCTACTACTT+CGG - tig0002269:23484-23503 Msa1338580:CDS 30.0%
ATGAAGGAAATGGAATGTTA+AGG - tig0002269:23573-23592 Msa1338580:CDS 30.0%
GGAGATTAAAGTCATTAAAG+AGG - tig0002269:23660-23679 Msa1338580:CDS 30.0%
CAATTCAAAAGAAGATGGTT+TGG - tig0002269:23190-23209 Msa1338580:CDS 30.0%
! AAAAGAAGATGGTTTGGATT+TGG - tig0002269:23196-23215 Msa1338580:CDS 30.0%
TGAAACATGTGATTGCATTT+AGG + tig0002269:23275-23294 None:intergenic 30.0%
! ACATAGATTGCATTGATATG+TGG - tig0002269:23294-23313 Msa1338580:CDS 30.0%
ATGAAGAAGAAGAGGTTATT+TGG + tig0002269:23475-23494 None:intergenic 30.0%
TTCTTCTTCATCTACTACTT+CGG - tig0002269:23484-23503 Msa1338580:CDS 30.0%
ATGAAGGAAATGGAATGTTA+AGG - tig0002269:23573-23592 Msa1338580:CDS 30.0%
GGAGATTAAAGTCATTAAAG+AGG - tig0002269:23660-23679 Msa1338580:CDS 30.0%
CATCATCATTCTTCTCTTCA+TGG - tig0002269:23004-23023 Msa1338580:CDS 35.0%
! TTTCTTCCATCTTTTTGCCA+AGG - tig0002269:23043-23062 Msa1338580:CDS 35.0%
! TTCTTCCATCTTTTTGCCAA+GGG - tig0002269:23044-23063 Msa1338580:CDS 35.0%
TTCTACTACTACTACTACTG+AGG + tig0002269:23381-23400 None:intergenic 35.0%
TTCCCACAAATGTCTTGATT+TGG - tig0002269:23438-23457 Msa1338580:CDS 35.0%
TCCCACAAATGTCTTGATTT+GGG - tig0002269:23439-23458 Msa1338580:CDS 35.0%
AAGAAGAGGTTATTTGGTTG+TGG + tig0002269:23469-23488 None:intergenic 35.0%
AGTAGTAGATGAAGAAGAAG+AGG + tig0002269:23483-23502 None:intergenic 35.0%
TGTTAAGGATTGATATACCC+AGG - tig0002269:23588-23607 Msa1338580:CDS 35.0%
GTTAAGGATTGATATACCCA+GGG - tig0002269:23589-23608 Msa1338580:CDS 35.0%
CATCATCATTCTTCTCTTCA+TGG - tig0002269:23004-23023 Msa1338580:CDS 35.0%
! TTTCTTCCATCTTTTTGCCA+AGG - tig0002269:23043-23062 Msa1338580:CDS 35.0%
! TTCTTCCATCTTTTTGCCAA+GGG - tig0002269:23044-23063 Msa1338580:CDS 35.0%
TTCTACTACTACTACTACTG+AGG + tig0002269:23381-23400 None:intergenic 35.0%
TTCCCACAAATGTCTTGATT+TGG - tig0002269:23438-23457 Msa1338580:CDS 35.0%
TCCCACAAATGTCTTGATTT+GGG - tig0002269:23439-23458 Msa1338580:CDS 35.0%
AAGAAGAGGTTATTTGGTTG+TGG + tig0002269:23469-23488 None:intergenic 35.0%
AGTAGTAGATGAAGAAGAAG+AGG + tig0002269:23483-23502 None:intergenic 35.0%
TGTTAAGGATTGATATACCC+AGG - tig0002269:23588-23607 Msa1338580:CDS 35.0%
GTTAAGGATTGATATACCCA+GGG - tig0002269:23589-23608 Msa1338580:CDS 35.0%
! GATCTTGCCGGTTATATCAA+CGG + tig0002269:22976-22995 None:intergenic 40.0%
TGATATAACCGGCAAGATCA+TGG - tig0002269:22977-22996 Msa1338580:CDS 40.0%
AGAATCCCTTGGCAAAAAGA+TGG + tig0002269:23052-23071 None:intergenic 40.0%
! ATCTTTTTGCCAAGGGATTC+TGG - tig0002269:23051-23070 Msa1338580:CDS 40.0%
ACTACTACTACTACTGAGGA+GGG + tig0002269:23377-23396 None:intergenic 40.0%
TACTACTACTACTACTGAGG+AGG + tig0002269:23378-23397 None:intergenic 40.0%
CCCCAAATCAAGACATTTGT+GGG + tig0002269:23443-23462 None:intergenic 40.0%
! CCCACAAATGTCTTGATTTG+GGG - tig0002269:23440-23459 Msa1338580:CDS 40.0%
ACTTCTTCATCGTCATCCAA+TGG - tig0002269:23515-23534 Msa1338580:CDS 40.0%
! AGACGTGATGATGAAGGAAA+TGG - tig0002269:23563-23582 Msa1338580:CDS 40.0%
ATCATCATCACCCTTAGCTT+CGG - tig0002269:23631-23650 Msa1338580:CDS 40.0%
GTATAATGAGCCTGAATCCT+TGG - tig0002269:23705-23724 Msa1338580:CDS 40.0%
!! CTTCCTTTGGCTTTGTTTGT+TGG + tig0002269:23751-23770 None:intergenic 40.0%
! GATCTTGCCGGTTATATCAA+CGG + tig0002269:22976-22995 None:intergenic 40.0%
TGATATAACCGGCAAGATCA+TGG - tig0002269:22977-22996 Msa1338580:CDS 40.0%
AGAATCCCTTGGCAAAAAGA+TGG + tig0002269:23052-23071 None:intergenic 40.0%
! ATCTTTTTGCCAAGGGATTC+TGG - tig0002269:23051-23070 Msa1338580:CDS 40.0%
ACTACTACTACTACTGAGGA+GGG + tig0002269:23377-23396 None:intergenic 40.0%
TACTACTACTACTACTGAGG+AGG + tig0002269:23378-23397 None:intergenic 40.0%
CCCCAAATCAAGACATTTGT+GGG + tig0002269:23443-23462 None:intergenic 40.0%
! CCCACAAATGTCTTGATTTG+GGG - tig0002269:23440-23459 Msa1338580:CDS 40.0%
ACTTCTTCATCGTCATCCAA+TGG - tig0002269:23515-23534 Msa1338580:CDS 40.0%
! AGACGTGATGATGAAGGAAA+TGG - tig0002269:23563-23582 Msa1338580:CDS 40.0%
ATCATCATCACCCTTAGCTT+CGG - tig0002269:23631-23650 Msa1338580:CDS 40.0%
GTATAATGAGCCTGAATCCT+TGG - tig0002269:23705-23724 Msa1338580:CDS 40.0%
!! CTTCCTTTGGCTTTGTTTGT+TGG + tig0002269:23751-23770 None:intergenic 40.0%
TATAACCGGCAAGATCATGG+TGG - tig0002269:22980-22999 Msa1338580:CDS 45.0%
! TTTTTGCCAAGGGATTCTGG+TGG - tig0002269:23054-23073 Msa1338580:CDS 45.0%
ACAACAATTCCCAATCCCGA+AGG - tig0002269:23096-23115 Msa1338580:CDS 45.0%
TATGGGTAGGGAGTTGAGTA+CGG + tig0002269:23162-23181 None:intergenic 45.0%
GGAAGTGGTTGAAGGAGAAA+AGG - tig0002269:23238-23257 Msa1338580:CDS 45.0%
TGGTTGAAGGAGAAAAGGTG+AGG - tig0002269:23243-23262 Msa1338580:CDS 45.0%
GGTTGAAGGAGAAAAGGTGA+GGG - tig0002269:23244-23263 Msa1338580:CDS 45.0%
CAAGAGTTGTCCTGCAAAGA+GGG + tig0002269:23340-23359 None:intergenic 45.0%
GCCCCAAATCAAGACATTTG+TGG + tig0002269:23444-23463 None:intergenic 45.0%
! AGCAACAGACGTGATGATGA+AGG - tig0002269:23557-23576 Msa1338580:CDS 45.0%
! TGTTGGTGGACAGTAGAAGT+GGG + tig0002269:23734-23753 None:intergenic 45.0%
! TTGTTGGTGGACAGTAGAAG+TGG + tig0002269:23735-23754 None:intergenic 45.0%
!! CCTTTGGCTTTGTTTGTTGG+TGG + tig0002269:23748-23767 None:intergenic 45.0%
CCACCAACAAACAAAGCCAA+AGG - tig0002269:23745-23764 Msa1338580:CDS 45.0%
TATAACCGGCAAGATCATGG+TGG - tig0002269:22980-22999 Msa1338580:CDS 45.0%
! TTTTTGCCAAGGGATTCTGG+TGG - tig0002269:23054-23073 Msa1338580:CDS 45.0%
ACAACAATTCCCAATCCCGA+AGG - tig0002269:23096-23115 Msa1338580:CDS 45.0%
TATGGGTAGGGAGTTGAGTA+CGG + tig0002269:23162-23181 None:intergenic 45.0%
GGAAGTGGTTGAAGGAGAAA+AGG - tig0002269:23238-23257 Msa1338580:CDS 45.0%
TGGTTGAAGGAGAAAAGGTG+AGG - tig0002269:23243-23262 Msa1338580:CDS 45.0%
GGTTGAAGGAGAAAAGGTGA+GGG - tig0002269:23244-23263 Msa1338580:CDS 45.0%
CAAGAGTTGTCCTGCAAAGA+GGG + tig0002269:23340-23359 None:intergenic 45.0%
GCCCCAAATCAAGACATTTG+TGG + tig0002269:23444-23463 None:intergenic 45.0%
! AGCAACAGACGTGATGATGA+AGG - tig0002269:23557-23576 Msa1338580:CDS 45.0%
! TGTTGGTGGACAGTAGAAGT+GGG + tig0002269:23734-23753 None:intergenic 45.0%
! TTGTTGGTGGACAGTAGAAG+TGG + tig0002269:23735-23754 None:intergenic 45.0%
!! CCTTTGGCTTTGTTTGTTGG+TGG + tig0002269:23748-23767 None:intergenic 45.0%
CCACCAACAAACAAAGCCAA+AGG - tig0002269:23745-23764 Msa1338580:CDS 45.0%
TCCCCAGCCGTTGATATAAC+CGG - tig0002269:22966-22985 Msa1338580:CDS 50.0%
! TGCCGGTTATATCAACGGCT+GGG + tig0002269:22971-22990 None:intergenic 50.0%
! TTGCCGGTTATATCAACGGC+TGG + tig0002269:22972-22991 None:intergenic 50.0%
GATGACCACCATGATCTTGC+CGG + tig0002269:22988-23007 None:intergenic 50.0%
!! GATTCTGGTGGACTCAGAGT+CGG - tig0002269:23066-23085 Msa1338580:CDS 50.0%
! GGAGTGTTCAGTTTGCCTGT+CGG - tig0002269:23217-23236 Msa1338580:CDS 50.0%
TTCAGTTTGCCTGTCGGAAG+TGG - tig0002269:23223-23242 Msa1338580:CDS 50.0%
GCAAGAGTTGTCCTGCAAAG+AGG + tig0002269:23341-23360 None:intergenic 50.0%
ACTACTACTACTGAGGAGGG+AGG + tig0002269:23374-23393 None:intergenic 50.0%
! TGATATACCCAGGGAGTGTG+AGG - tig0002269:23598-23617 Msa1338580:CDS 50.0%
! CTTTTAAGCAGCAGCAGCAG+AGG - tig0002269:23683-23702 Msa1338580:CDS 50.0%
AAGTGGGACTCCAAGGATTC+AGG + tig0002269:23718-23737 None:intergenic 50.0%
ACAGTAGAAGTGGGACTCCA+AGG + tig0002269:23725-23744 None:intergenic 50.0%
ACAAAGCCAAAGGAAGCAGC+AGG - tig0002269:23755-23774 Msa1338580:CDS 50.0%
! CTTTGTCCTGCTGCTTCCTT+TGG + tig0002269:23764-23783 None:intergenic 50.0%
TCCCCAGCCGTTGATATAAC+CGG - tig0002269:22966-22985 Msa1338580:CDS 50.0%
! TGCCGGTTATATCAACGGCT+GGG + tig0002269:22971-22990 None:intergenic 50.0%
! TTGCCGGTTATATCAACGGC+TGG + tig0002269:22972-22991 None:intergenic 50.0%
GATGACCACCATGATCTTGC+CGG + tig0002269:22988-23007 None:intergenic 50.0%
!! GATTCTGGTGGACTCAGAGT+CGG - tig0002269:23066-23085 Msa1338580:CDS 50.0%
! GGAGTGTTCAGTTTGCCTGT+CGG - tig0002269:23217-23236 Msa1338580:CDS 50.0%
TTCAGTTTGCCTGTCGGAAG+TGG - tig0002269:23223-23242 Msa1338580:CDS 50.0%
GCAAGAGTTGTCCTGCAAAG+AGG + tig0002269:23341-23360 None:intergenic 50.0%
ACTACTACTACTGAGGAGGG+AGG + tig0002269:23374-23393 None:intergenic 50.0%
! TGATATACCCAGGGAGTGTG+AGG - tig0002269:23598-23617 Msa1338580:CDS 50.0%
! CTTTTAAGCAGCAGCAGCAG+AGG - tig0002269:23683-23702 Msa1338580:CDS 50.0%
AAGTGGGACTCCAAGGATTC+AGG + tig0002269:23718-23737 None:intergenic 50.0%
ACAGTAGAAGTGGGACTCCA+AGG + tig0002269:23725-23744 None:intergenic 50.0%
ACAAAGCCAAAGGAAGCAGC+AGG - tig0002269:23755-23774 Msa1338580:CDS 50.0%
! CTTTGTCCTGCTGCTTCCTT+TGG + tig0002269:23764-23783 None:intergenic 50.0%
GCCGGTTATATCAACGGCTG+GGG + tig0002269:22970-22989 None:intergenic 55.0%
CTGAGTCCACCAGAATCCCT+TGG + tig0002269:23063-23082 None:intergenic 55.0%
GGTAGGGAGTTGAGTACGGA+AGG + tig0002269:23158-23177 None:intergenic 55.0%
TGCCTGTCGGAAGTGGTTGA+AGG - tig0002269:23230-23249 Msa1338580:CDS 55.0%
CTCCTTCAACCACTTCCGAC+AGG + tig0002269:23235-23254 None:intergenic 55.0%
! GCAAAGAGGGCAGGTTGAGT+GGG + tig0002269:23327-23346 None:intergenic 55.0%
! TGCAAAGAGGGCAGGTTGAG+TGG + tig0002269:23328-23347 None:intergenic 55.0%
ACTCAACCTGCCCTCTTTGC+AGG - tig0002269:23327-23346 Msa1338580:CDS 55.0%
AGTTGTCCTGCAAAGAGGGC+AGG + tig0002269:23336-23355 None:intergenic 55.0%
ACTACTACTGAGGAGGGAGG+AGG + tig0002269:23371-23390 None:intergenic 55.0%
TCACCCTTAGCTTCGGCAGA+AGG - tig0002269:23638-23657 Msa1338580:CDS 55.0%
CACCCTTAGCTTCGGCAGAA+GGG - tig0002269:23639-23658 Msa1338580:CDS 55.0%
CTCCCTTCTGCCGAAGCTAA+GGG + tig0002269:23644-23663 None:intergenic 55.0%
TCTCCCTTCTGCCGAAGCTA+AGG + tig0002269:23645-23664 None:intergenic 55.0%
GCCGGTTATATCAACGGCTG+GGG + tig0002269:22970-22989 None:intergenic 55.0%
CTGAGTCCACCAGAATCCCT+TGG + tig0002269:23063-23082 None:intergenic 55.0%
GGTAGGGAGTTGAGTACGGA+AGG + tig0002269:23158-23177 None:intergenic 55.0%
TGCCTGTCGGAAGTGGTTGA+AGG - tig0002269:23230-23249 Msa1338580:CDS 55.0%
CTCCTTCAACCACTTCCGAC+AGG + tig0002269:23235-23254 None:intergenic 55.0%
! GCAAAGAGGGCAGGTTGAGT+GGG + tig0002269:23327-23346 None:intergenic 55.0%
! TGCAAAGAGGGCAGGTTGAG+TGG + tig0002269:23328-23347 None:intergenic 55.0%
ACTCAACCTGCCCTCTTTGC+AGG - tig0002269:23327-23346 Msa1338580:CDS 55.0%
AGTTGTCCTGCAAAGAGGGC+AGG + tig0002269:23336-23355 None:intergenic 55.0%
ACTACTACTGAGGAGGGAGG+AGG + tig0002269:23371-23390 None:intergenic 55.0%
TCACCCTTAGCTTCGGCAGA+AGG - tig0002269:23638-23657 Msa1338580:CDS 55.0%
CACCCTTAGCTTCGGCAGAA+GGG - tig0002269:23639-23658 Msa1338580:CDS 55.0%
CTCCCTTCTGCCGAAGCTAA+GGG + tig0002269:23644-23663 None:intergenic 55.0%
TCTCCCTTCTGCCGAAGCTA+AGG + tig0002269:23645-23664 None:intergenic 55.0%
! ATTCCCAATCCCGAAGGCGC+CGG - tig0002269:23102-23121 Msa1338580:CDS 60.0%
CACCCTCTTGACCACTACGC+CGG + tig0002269:23124-23143 None:intergenic 60.0%
CGTAGTGGTCAAGAGGGTGG+TGG - tig0002269:23125-23144 Msa1338580:CDS 60.0%
! GAGGGCAGGTTGAGTGGGAA+TGG + tig0002269:23322-23341 None:intergenic 60.0%
GTAGTCGCCTCACACTCCCT+GGG + tig0002269:23608-23627 None:intergenic 60.0%
AGTAGTCGCCTCACACTCCC+TGG + tig0002269:23609-23628 None:intergenic 60.0%
! ATTCCCAATCCCGAAGGCGC+CGG - tig0002269:23102-23121 Msa1338580:CDS 60.0%
CACCCTCTTGACCACTACGC+CGG + tig0002269:23124-23143 None:intergenic 60.0%
CGTAGTGGTCAAGAGGGTGG+TGG - tig0002269:23125-23144 Msa1338580:CDS 60.0%
! GAGGGCAGGTTGAGTGGGAA+TGG + tig0002269:23322-23341 None:intergenic 60.0%
GTAGTCGCCTCACACTCCCT+GGG + tig0002269:23608-23627 None:intergenic 60.0%
AGTAGTCGCCTCACACTCCC+TGG + tig0002269:23609-23628 None:intergenic 60.0%
CGCCGGCGTAGTGGTCAAGA+GGG - tig0002269:23119-23138 Msa1338580:CDS 65.0%
CGGCGTAGTGGTCAAGAGGG+TGG - tig0002269:23122-23141 Msa1338580:CDS 65.0%
CGCCGGCGTAGTGGTCAAGA+GGG - tig0002269:23119-23138 Msa1338580:CDS 65.0%
CGGCGTAGTGGTCAAGAGGG+TGG - tig0002269:23122-23141 Msa1338580:CDS 65.0%
ACGCCGGCGCCTTCGGGATT+GGG + tig0002269:23108-23127 None:intergenic 70.0%
TACGCCGGCGCCTTCGGGAT+TGG + tig0002269:23109-23128 None:intergenic 70.0%
ACCACTACGCCGGCGCCTTC+GGG + tig0002269:23114-23133 None:intergenic 70.0%
GACCACTACGCCGGCGCCTT+CGG + tig0002269:23115-23134 None:intergenic 70.0%
! GCGCCGGCGTAGTGGTCAAG+AGG - tig0002269:23118-23137 Msa1338580:CDS 70.0%
ACGCCGGCGCCTTCGGGATT+GGG + tig0002269:23108-23127 None:intergenic 70.0%
TACGCCGGCGCCTTCGGGAT+TGG + tig0002269:23109-23128 None:intergenic 70.0%
ACCACTACGCCGGCGCCTTC+GGG + tig0002269:23114-23133 None:intergenic 70.0%
GACCACTACGCCGGCGCCTT+CGG + tig0002269:23115-23134 None:intergenic 70.0%
! GCGCCGGCGTAGTGGTCAAG+AGG - tig0002269:23118-23137 Msa1338580:CDS 70.0%
!! TCCCGAAGGCGCCGGCGTAG+TGG - tig0002269:23110-23129 Msa1338580:CDS 75.0%
!! TCCCGAAGGCGCCGGCGTAG+TGG - tig0002269:23110-23129 Msa1338580:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0002269 gene 22924 23787 22924 ID=Msa1338580;Name=Msa1338580
tig0002269 mRNA 22924 23787 22924 ID=Msa1338580-mRNA-1;Parent=Msa1338580;Name=Msa1338580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|287
tig0002269 exon 22924 23787 22924 ID=Msa1338580-mRNA-1:exon:1712;Parent=Msa1338580-mRNA-1
tig0002269 CDS 22924 23787 22924 ID=Msa1338580-mRNA-1:cds;Parent=Msa1338580-mRNA-1
Gene Sequence

>Msa1338580

ATGAGTGACTCATTGGCAAGTGATAATAATCAACTTGATGATTCCCCAGCCGTTGATATAACCGGCAAGATCATGGTGGTCATCATCATTCTTCTCTTCATGGTTATTGTTACTTTTCTTTTCTTCCATCTTTTTGCCAAGGGATTCTGGTGGACTCAGAGTCGGAGCAGTGACAACAATTCCCAATCCCGAAGGCGCCGGCGTAGTGGTCAAGAGGGTGGTGGTCTTGATCCTTCCGTACTCAACTCCCTACCCATATCAATATTCAATTCAAAAGAAGATGGTTTGGATTTGGAGTGTTCAGTTTGCCTGTCGGAAGTGGTTGAAGGAGAAAAGGTGAGGGTTTTGCCTAAATGCAATCACATGTTTCACATAGATTGCATTGATATGTGGTTCCATTCCCACTCAACCTGCCCTCTTTGCAGGACAACTCTTGCTGCAACTCCTCCTCCCTCCTCAGTAGTAGTAGTAGTAGAAGTAGAATCATCAACATCTGCTGCTGCTGCTGCTGCTTTTCCCACAAATGTCTTGATTTGGGGCAACCACAACCAAATAACCTCTTCTTCTTCATCTACTACTTCGGAACAAAACACTTCTTCATCGTCATCCAATGGTGATAATACTATAAATAACAGCAACAGACGTGATGATGAAGGAAATGGAATGTTAAGGATTGATATACCCAGGGAGTGTGAGGCGACTACTTCATCATCATCACCCTTAGCTTCGGCAGAAGGGAGATTAAAGTCATTAAAGAGGCTTTTAAGCAGCAGCAGCAGAGGTATAATGAGCCTGAATCCTTGGAGTCCCACTTCTACTGTCCACCAACAAACAAAGCCAAAGGAAGCAGCAGGACAAAGCTAG
Protein sequence

>Msa1338580

MSDSLASDNNQLDDSPAVDITGKIMVVIIILLFMVIVTFLFFHLFAKGFWWTQSRSSDNNSQSRRRRRSGQEGGGLDPSVLNSLPISIFNSKEDGLDLECSVCLSEVVEGEKVRVLPKCNHMFHIDCIDMWFHSHSTCPLCRTTLAATPPPSSVVVVVEVESSTSAAAAAAFPTNVLIWGNHNQITSSSSSTTSEQNTSSSSSNGDNTINNSNRRDDEGNGMLRIDIPRECEATTSSSSPLASAEGRLKSLKRLLSSSSRGIMSLNPWSPTSTVHQQTKPKEAAGQS*