AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1432180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1432180 MtrunA17_Chr4g0064041 97.297 370 10 0 1 370 1 370 0.0 704
Msa1432180 MtrunA17_Chr6g0483981 52.475 202 66 5 1 184 1 190 6.81e-51 178
Msa1432180 MtrunA17_Chr6g0483981 48.227 141 66 3 190 327 26 162 1.95e-31 125
Msa1432180 MtrunA17_Chr2g0306461 46.875 128 65 3 1 128 1 125 1.58e-31 118
Msa1432180 MtrunA17_Chr2g0306461 47.273 110 56 2 181 290 18 125 5.99e-28 108
Msa1432180 MtrunA17_Chr5g0394321 43.885 139 70 4 29 166 26 157 2.43e-31 117
Msa1432180 MtrunA17_Chr5g0394321 37.931 174 85 4 190 362 25 176 1.71e-30 115
Msa1432180 MtrunA17_Chr4g0033131 44.531 128 66 4 3 128 5 129 1.09e-30 115
Msa1432180 MtrunA17_Chr4g0033131 42.017 119 65 2 185 301 22 138 5.30e-26 102
Msa1432180 MtrunA17_Chr4g0033531 44.531 128 66 4 3 128 5 129 1.09e-30 115
Msa1432180 MtrunA17_Chr4g0033531 42.017 119 65 2 185 301 22 138 5.30e-26 102
Msa1432180 MtrunA17_Chr1g0205701 41.497 147 79 3 190 336 24 163 2.78e-27 106
Msa1432180 MtrunA17_Chr1g0205701 41.096 146 76 3 31 176 27 162 1.45e-25 102
Msa1432180 MtrunA17_Chr3g0132431 44.828 116 59 2 27 142 24 134 1.48e-26 104
Msa1432180 MtrunA17_Chr3g0132431 41.985 131 67 4 180 309 18 140 1.77e-24 99.0
Msa1432180 MtrunA17_Chr3g0132441 49.020 102 47 2 27 128 24 120 7.19e-26 102
Msa1432180 MtrunA17_Chr3g0132441 50.000 100 45 2 191 290 26 120 1.14e-24 99.4
Msa1432180 MtrunA17_Chr3g0132701 48.544 103 48 2 27 128 24 122 5.13e-25 101
Msa1432180 MtrunA17_Chr3g0132701 45.690 116 55 3 176 290 14 122 4.62e-24 98.6
Msa1432180 MtrunA17_Chr3g0132511 48.544 103 48 2 27 128 24 122 5.48e-25 101
Msa1432180 MtrunA17_Chr3g0132511 45.690 116 55 3 176 290 14 122 5.92e-24 98.6
Msa1432180 MtrunA17_Chr8g0387804 36.434 129 79 2 1 128 1 127 2.01e-24 97.1
Msa1432180 MtrunA17_Chr8g0387804 36.634 101 63 1 190 290 28 127 2.10e-16 75.1
Msa1432180 MtrunA17_Chr1g0196801 35.526 152 85 3 190 341 22 160 1.77e-23 95.9
Msa1432180 MtrunA17_Chr1g0196801 35.200 125 74 3 27 149 21 140 1.24e-16 77.0
Msa1432180 MtrunA17_Chr1g0150131 40.000 120 67 2 194 311 29 145 4.00e-23 95.1
Msa1432180 MtrunA17_Chr1g0150131 33.333 138 89 2 13 147 9 146 5.76e-19 84.0
Msa1432180 MtrunA17_Chr8g0335531 40.698 172 84 7 1 170 1 156 1.30e-22 94.0
Msa1432180 MtrunA17_Chr8g0335531 34.615 182 91 6 191 365 24 184 7.39e-20 86.3
Msa1432180 MtrunA17_Chr6g0458331 42.574 101 55 2 191 290 37 135 6.48e-22 91.3
Msa1432180 MtrunA17_Chr6g0458331 38.679 106 62 2 25 129 33 136 6.99e-18 80.5
Msa1432180 MtrunA17_Chr8g0360371 39.130 115 67 2 191 305 24 135 8.71e-22 94.4
Msa1432180 MtrunA17_Chr8g0360371 29.577 213 112 6 5 189 7 209 4.12e-18 84.0
Msa1432180 MtrunA17_Chr2g0331181 36.913 149 72 6 191 336 27 156 1.65e-21 90.9
Msa1432180 MtrunA17_Chr2g0331181 34.437 151 95 3 11 160 9 156 5.04e-20 87.0
Msa1432180 MtrunA17_Chr3g0132411 41.818 110 59 2 191 300 65 169 2.03e-21 90.1
Msa1432180 MtrunA17_Chr3g0132411 37.963 108 62 2 27 134 63 165 1.42e-14 71.2
Msa1432180 MtrunA17_Chr2g0323021 35.256 156 93 5 9 163 6 154 2.56e-21 91.3
Msa1432180 MtrunA17_Chr2g0323021 41.964 112 57 3 198 309 33 136 6.55e-21 90.5
Msa1432180 MtrunA17_Chr4g0064031 40.984 122 69 3 25 144 25 145 9.78e-21 88.2
Msa1432180 MtrunA17_Chr4g0064031 40.816 98 55 3 191 285 28 125 1.80e-18 81.6
Msa1432180 MtrunA17_Chr1g0211101 34.884 129 69 3 190 307 32 156 2.54e-20 87.4
Msa1432180 MtrunA17_Chr1g0211101 30.345 145 94 4 11 154 16 154 1.44e-16 77.0
Msa1432180 MtrunA17_Chr2g0301431 40.000 120 61 5 11 127 12 123 3.28e-20 85.5
Msa1432180 MtrunA17_Chr2g0301431 39.394 99 53 2 191 289 32 123 9.23e-17 75.9
Msa1432180 MtrunA17_Chr7g0253701 37.795 127 64 4 9 129 6 123 3.76e-20 86.3
Msa1432180 MtrunA17_Chr7g0253701 40.594 101 55 2 191 290 26 122 4.79e-15 72.0
Msa1432180 MtrunA17_Chr7g0253671 37.795 127 64 4 9 129 6 123 3.76e-20 86.3
Msa1432180 MtrunA17_Chr7g0253671 40.594 101 55 2 191 290 26 122 4.79e-15 72.0
Msa1432180 MtrunA17_Chr1g0177341 37.190 121 71 2 11 130 7 123 9.91e-20 85.1
Msa1432180 MtrunA17_Chr1g0177341 41.584 101 54 2 191 290 25 121 4.51e-17 77.8
Msa1432180 MtrunA17_Chr1g0177331 37.190 121 71 2 11 130 7 123 9.91e-20 85.1
Msa1432180 MtrunA17_Chr1g0177331 41.584 101 54 2 191 290 25 121 4.51e-17 77.8
Msa1432180 MtrunA17_Chr8g0335571 43.137 102 51 3 191 290 24 120 1.83e-19 85.5
Msa1432180 MtrunA17_Chr8g0335571 41.935 124 60 5 10 131 10 123 1.91e-18 82.8
Msa1432180 MtrunA17_Chr7g0253631 37.500 120 71 1 9 128 6 121 3.38e-19 85.9
Msa1432180 MtrunA17_Chr7g0253631 36.275 102 57 3 191 290 26 121 4.20e-13 68.6
Msa1432180 MtrunA17_Chr7g0253681 37.500 128 64 5 9 129 6 124 4.09e-19 83.6
Msa1432180 MtrunA17_Chr7g0253681 38.261 115 66 2 177 290 13 123 1.87e-16 76.3
Msa1432180 MtrunA17_Chr2g0317231 37.624 101 61 1 190 290 24 122 4.48e-19 89.0
Msa1432180 MtrunA17_Chr2g0317231 29.457 129 85 3 1 129 1 123 2.16e-12 68.6
Msa1432180 MtrunA17_Chr4g0062341 32.394 142 85 4 191 330 32 164 5.12e-19 84.0
Msa1432180 MtrunA17_Chr4g0062341 32.000 150 87 4 27 174 30 166 1.65e-16 77.0
Msa1432180 MtrunA17_Chr4g0062311 32.394 142 85 4 191 330 32 164 5.12e-19 84.0
Msa1432180 MtrunA17_Chr4g0062311 32.000 150 87 4 27 174 30 166 1.65e-16 77.0
Msa1432180 MtrunA17_Chr8g0380711 41.584 101 51 3 190 289 27 120 5.48e-19 82.0
Msa1432180 MtrunA17_Chr8g0380711 42.268 97 50 1 31 127 30 120 2.63e-18 80.1
Msa1432180 MtrunA17_Chr4g0041811 38.235 102 63 0 191 292 32 133 6.96e-19 84.3
Msa1432180 MtrunA17_Chr4g0041811 32.000 100 68 0 30 129 33 132 9.60e-14 70.1
Msa1432180 MtrunA17_Chr3g0136871 36.607 112 70 1 194 304 31 142 1.74e-18 82.4
Msa1432180 MtrunA17_Chr3g0136871 28.916 166 96 3 25 190 24 167 6.96e-14 69.3
Msa1432180 MtrunA17_Chr2g0324721 31.953 169 108 4 191 355 27 192 1.84e-18 82.8
Msa1432180 MtrunA17_Chr2g0324721 34.615 156 93 4 31 185 29 176 4.41e-18 81.6
Msa1432180 MtrunA17_Chr7g0253731 35.484 124 65 4 12 129 8 122 4.99e-18 80.5
Msa1432180 MtrunA17_Chr7g0253731 37.624 101 58 2 191 290 25 121 4.34e-14 69.3
Msa1432180 MtrunA17_Chr7g0253761 31.737 167 97 4 10 164 7 168 6.16e-18 80.9
Msa1432180 MtrunA17_Chr7g0253761 34.000 100 62 1 191 290 26 121 1.18e-12 65.9
Msa1432180 MtrunA17_Chr4g0039721 31.111 135 87 3 191 323 32 162 3.31e-17 79.0
Msa1432180 MtrunA17_Chr4g0039721 30.645 124 80 3 27 148 30 149 1.13e-13 68.9
Msa1432180 MtrunA17_Chr8g0380901 40.000 100 53 2 190 289 27 119 4.27e-17 76.6
Msa1432180 MtrunA17_Chr8g0380901 35.537 121 67 3 7 127 10 119 8.02e-15 70.5
Msa1432180 MtrunA17_Chr3g0125791 37.736 106 59 2 183 288 25 123 4.76e-17 76.6
Msa1432180 MtrunA17_Chr3g0125791 37.624 101 56 2 29 129 33 126 9.92e-15 70.5
Msa1432180 MtrunA17_Chr7g0253641 35.593 118 72 1 12 129 9 122 8.52e-17 79.0
Msa1432180 MtrunA17_Chr7g0253641 37.255 102 56 3 191 290 26 121 7.45e-14 70.5
Msa1432180 MtrunA17_Chr6g0459441 39.423 104 57 4 191 293 26 124 1.21e-16 77.0
Msa1432180 MtrunA17_Chr6g0459441 36.893 103 59 3 27 128 24 121 1.47e-13 68.6
Msa1432180 MtrunA17_Chr8g0385031 33.750 160 92 3 191 337 24 182 1.58e-16 79.3
Msa1432180 MtrunA17_Chr8g0385031 29.353 201 113 6 7 188 6 196 1.43e-15 76.6
Msa1432180 MtrunA17_Chr2g0324711 33.621 116 70 2 191 301 25 138 4.27e-16 79.0
Msa1432180 MtrunA17_Chr2g0324711 29.130 230 131 7 5 213 10 228 1.08e-15 77.4
Msa1432180 MtrunA17_Chr6g0481491 36.697 109 64 2 191 299 28 131 5.11e-16 76.3
Msa1432180 MtrunA17_Chr6g0481491 32.203 118 75 2 11 128 10 122 3.13e-15 73.9
Msa1432180 MtrunA17_Chr4g0040291 34.694 147 90 4 31 177 27 167 5.27e-16 75.5
Msa1432180 MtrunA17_Chr4g0040291 31.538 130 84 3 190 318 24 149 7.90e-14 69.3
Msa1432180 MtrunA17_Chr6g0453921 35.606 132 78 3 184 313 31 157 5.59e-16 75.5
Msa1432180 MtrunA17_Chr6g0453921 35.252 139 83 3 8 144 17 150 1.55e-14 71.2
Msa1432180 MtrunA17_Chr8g0385041 31.250 192 112 5 31 208 27 212 4.25e-15 75.5
Msa1432180 MtrunA17_Chr8g0385041 33.108 148 83 4 191 325 25 169 2.47e-13 70.1
Msa1432180 MtrunA17_Chr2g0319611 36.275 102 63 2 191 290 26 127 4.71e-15 74.3
Msa1432180 MtrunA17_Chr2g0319611 33.945 109 70 2 28 134 25 133 3.97e-13 68.9
Msa1432180 MtrunA17_Chr8g0385021 34.507 142 86 2 191 326 24 164 1.14e-14 73.6
Msa1432180 MtrunA17_Chr8g0385021 30.526 190 119 5 7 188 6 190 7.39e-13 68.2
Msa1432180 MtrunA17_Chr6g0453801 32.877 146 91 3 184 327 28 168 2.97e-14 70.1
Msa1432180 MtrunA17_Chr6g0453801 30.263 152 91 4 9 158 23 161 3.71e-12 64.3
Msa1432180 MtrunA17_Chr6g0453791 35.938 128 73 4 187 313 27 146 6.30e-14 69.3
Msa1432180 MtrunA17_Chr3g0125761 36.449 107 61 2 183 289 25 124 6.45e-14 68.2
Msa1432180 MtrunA17_Chr3g0125761 31.746 126 72 4 5 127 10 124 9.79e-13 64.7
Msa1432180 MtrunA17_Chr1g0188981 33.562 146 88 3 191 327 29 174 1.25e-13 68.9
Msa1432180 MtrunA17_Chr1g0188981 33.333 99 65 1 31 128 31 129 1.29e-12 66.2
Msa1432180 MtrunA17_Chr2g0289741 28.758 153 93 3 9 160 7 144 4.75e-13 66.6
Msa1432180 MtrunA17_Chr2g0289741 29.530 149 95 3 185 332 21 160 1.84e-11 62.4
Msa1432180 MtrunA17_Chr4g0001571 34.375 128 76 3 182 309 23 142 5.44e-13 66.6
Msa1432180 MtrunA17_Chr4g0001571 34.314 102 62 2 27 128 27 123 2.42e-12 64.7
Msa1432180 MtrunA17_Chr4g0073901 30.693 101 69 1 191 290 29 129 7.79e-13 66.6
Msa1432180 MtrunA17_Chr5g0441381 32.051 156 86 6 191 329 34 186 3.86e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1432180 AT2G32300.1 41.497 147 82 2 9 155 6 148 2.10e-30 117
Msa1432180 AT2G32300.1 39.716 141 78 2 191 331 26 159 7.70e-24 99.8
Msa1432180 AT2G32300.2 41.497 147 82 2 9 155 36 178 7.63e-30 116
Msa1432180 AT2G32300.2 39.716 141 78 2 191 331 56 189 2.47e-23 99.0
Msa1432180 AT2G31050.1 39.655 174 96 2 10 177 10 180 2.11e-29 112
Msa1432180 AT2G31050.1 42.017 119 66 1 185 303 23 138 5.92e-25 100
Msa1432180 AT5G20230.1 46.721 122 63 2 31 151 27 147 1.95e-28 110
Msa1432180 AT5G20230.1 37.430 179 105 3 191 369 25 196 3.34e-28 109
Msa1432180 AT3G17675.1 51.923 104 42 3 27 128 30 127 5.21e-28 107
Msa1432180 AT3G17675.1 40.000 100 56 1 191 290 32 127 2.04e-20 86.7
Msa1432180 AT2G26720.1 40.426 141 81 1 1 141 1 138 2.36e-27 107
Msa1432180 AT2G26720.1 38.655 119 70 1 185 303 23 138 1.76e-22 94.4
Msa1432180 AT2G25060.1 42.149 121 61 2 192 311 32 144 1.29e-25 102
Msa1432180 AT2G25060.1 39.241 158 77 4 13 163 14 159 2.24e-23 96.3
Msa1432180 AT5G26330.1 46.000 100 52 1 191 290 24 121 1.45e-25 102
Msa1432180 AT5G26330.1 45.455 99 52 1 31 129 26 122 2.78e-22 93.6
Msa1432180 AT1G45063.2 26.780 295 169 6 9 301 9 258 1.62e-25 104
Msa1432180 AT1G45063.1 26.780 295 169 6 9 301 9 258 9.70e-25 104
Msa1432180 AT3G20570.1 38.281 128 78 1 191 318 30 156 1.44e-23 97.4
Msa1432180 AT3G20570.1 34.239 184 117 4 1 183 1 181 2.11e-20 88.6
Msa1432180 AT3G53330.1 27.698 278 165 9 31 290 27 286 5.54e-23 98.2
Msa1432180 AT4G31840.1 34.807 181 84 6 192 369 28 177 8.82e-23 94.4
Msa1432180 AT4G31840.1 31.613 155 98 1 6 160 5 151 5.55e-19 84.0
Msa1432180 AT5G53870.2 38.235 170 86 5 191 347 22 185 1.20e-21 95.5
Msa1432180 AT5G53870.2 34.066 182 106 4 10 188 12 182 2.56e-19 88.6
Msa1432180 AT5G53870.1 38.235 170 86 5 191 347 22 185 1.49e-21 95.1
Msa1432180 AT5G53870.1 34.066 182 106 4 10 188 12 182 3.33e-19 88.6
Msa1432180 AT3G60270.1 41.121 107 58 2 184 290 19 120 1.79e-21 91.3
Msa1432180 AT3G60270.1 42.574 101 53 2 31 131 28 123 1.92e-19 85.5
Msa1432180 AT5G07475.1 38.571 140 71 5 190 319 29 163 3.01e-21 90.9
Msa1432180 AT5G07475.1 38.333 120 67 3 27 144 28 142 2.74e-17 79.7
Msa1432180 AT4G28365.1 31.053 190 113 6 1 188 5 178 1.40e-20 89.0
Msa1432180 AT4G28365.1 34.737 190 93 8 191 368 29 199 4.03e-19 85.1
Msa1432180 AT4G30590.1 34.579 107 69 1 185 290 22 128 9.21e-20 86.7
Msa1432180 AT4G30590.1 33.803 142 87 3 8 145 10 148 6.94e-16 75.9
Msa1432180 AT1G79800.1 37.838 111 66 2 181 290 24 132 3.94e-19 84.7
Msa1432180 AT1G79800.1 34.454 119 71 4 31 145 36 151 3.32e-14 70.9
Msa1432180 AT5G15350.1 38.519 135 76 3 181 313 19 148 4.38e-19 84.3
Msa1432180 AT5G15350.1 33.333 117 71 3 28 142 28 139 7.68e-12 63.9
Msa1432180 AT3G27200.1 35.878 131 71 5 1 129 3 122 6.47e-18 80.9
Msa1432180 AT3G27200.1 36.634 101 58 3 191 290 26 121 9.41e-16 75.1
Msa1432180 AT1G72230.1 34.328 134 83 2 197 330 29 157 9.99e-18 80.5
Msa1432180 AT1G72230.1 31.111 180 107 4 4 183 3 165 3.04e-17 79.3
Msa1432180 AT3G60280.1 38.679 106 60 3 183 288 16 116 4.03e-17 80.1
Msa1432180 AT3G60280.1 37.624 101 58 2 31 131 26 121 4.02e-14 71.2
Msa1432180 AT5G25090.1 32.544 169 101 4 194 362 30 185 5.07e-17 79.0
Msa1432180 AT5G25090.1 36.735 98 62 0 32 129 30 127 7.29e-13 67.0
Msa1432180 AT5G14345.1 33.636 110 70 2 197 305 22 129 6.41e-17 77.4
Msa1432180 AT5G14345.1 32.110 109 71 2 36 143 23 129 3.93e-13 66.6
Msa1432180 AT2G44790.1 37.719 114 60 4 184 295 25 129 1.35e-16 78.2
Msa1432180 AT2G44790.1 40.909 88 49 2 47 132 42 128 2.16e-15 74.7
Msa1432180 AT1G64640.1 36.667 120 74 2 191 309 33 151 2.73e-16 77.0
Msa1432180 AT1G64640.1 31.081 148 94 3 8 153 10 151 1.29e-15 75.1
Msa1432180 AT4G27520.1 33.333 144 91 4 3 146 7 145 4.93e-16 79.0
Msa1432180 AT4G27520.1 34.884 129 79 3 191 317 31 156 4.93e-16 79.0
Msa1432180 AT1G22480.1 40.385 104 57 2 34 137 24 122 2.97e-15 73.6
Msa1432180 AT1G22480.1 39.000 100 56 2 196 295 24 118 2.07e-14 71.2
Msa1432180 AT1G48940.1 36.842 95 56 2 198 290 33 125 9.31e-15 72.0
Msa1432180 AT1G48940.1 31.200 125 81 3 11 132 7 129 1.95e-11 62.8
Msa1432180 AT3G18590.1 35.294 102 62 2 191 290 27 126 9.46e-15 72.4
Msa1432180 AT3G18590.1 32.000 125 78 4 8 129 7 127 3.68e-12 65.1
Msa1432180 AT5G57920.1 29.348 92 65 0 199 290 32 123 3.33e-14 70.9
Msa1432180 AT5G57920.1 27.193 114 81 1 30 141 25 138 2.06e-11 62.8
Msa1432180 AT5G57920.2 28.696 115 80 1 199 311 31 145 5.79e-14 70.1
Msa1432180 AT5G57920.2 27.193 114 81 1 30 141 24 137 5.60e-11 61.6
Msa1432180 AT2G23990.1 31.959 194 124 5 8 199 7 194 6.13e-14 70.5
Msa1432180 AT2G23990.1 32.000 100 67 1 194 292 31 130 1.13e-13 69.7
Msa1432180 AT4G12880.1 36.975 119 68 3 174 290 12 125 7.93e-14 68.6
Msa1432180 AT5G57920.3 27.642 123 87 1 199 319 64 186 9.88e-14 70.1
Msa1432180 AT5G57920.3 26.786 112 80 1 32 141 59 170 8.44e-11 61.6
Msa1432180 AT2G02850.1 34.343 99 58 2 190 288 35 126 2.41e-13 67.0
Msa1432180 AT2G02850.1 32.787 122 74 3 9 129 15 129 3.68e-13 66.2
Msa1432180 AT4G32490.1 30.818 159 97 5 31 188 33 179 3.82e-13 68.6
Msa1432180 AT4G32490.1 28.272 191 102 7 191 355 31 212 1.38e-12 67.0
Msa1432180 AT1G08500.1 34.532 139 72 5 191 311 30 167 8.16e-12 64.7
Msa1432180 AT4G01380.1 35.417 96 59 3 198 291 79 173 1.36e-11 63.9

Find 154 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTTCTTGATTGTTATT+TGG 0.083068 tig0026958:+56823 Msa1432180:three_prime_UTR
TTTGATACGTTCCAACATTA+TGG 0.216064 tig0026958:-54625 None:intergenic
CTATTTCTTGATTGTTATTT+GGG 0.216861 tig0026958:+56824 Msa1432180:three_prime_UTR
TGATTTATTTGTGTGATTCT+TGG 0.220074 tig0026958:+56675 Msa1432180:three_prime_UTR
TACTATATCTGTGGTGTTAC+TGG 0.237614 tig0026958:+56316 Msa1432180:CDS
CTGTTCATCTACTACAGTTT+TGG 0.258545 tig0026958:+56752 Msa1432180:three_prime_UTR
GTTGGTATTTATAGGGAAAA+AGG 0.277208 tig0026958:-54690 None:intergenic
TATGTTTCGTTGGTATTTAT+AGG 0.279706 tig0026958:-54698 None:intergenic
TTATTTGGGATAGTTGTAAT+TGG 0.287487 tig0026958:+56838 Msa1432180:three_prime_UTR
ATGTTTCGTTGGTATTTATA+GGG 0.290046 tig0026958:-54697 None:intergenic
CAACATTGATGGAAAGCTTT+TGG 0.291973 tig0026958:-56354 None:intergenic
GATGAGATGAGATGCTAATT+AGG 0.295325 tig0026958:+56637 Msa1432180:three_prime_UTR
GCCGCGTCTCTTGGAGTTGC+CGG 0.310336 tig0026958:+56550 Msa1432180:CDS
AACTTCATTTGTGCCGTTCC+AGG 0.347262 tig0026958:+55260 Msa1432180:CDS
CCACGTTGTGTGCATTCAAT+TGG 0.357168 tig0026958:-56189 None:intergenic
AACTCCGGTGCCGCGTCTCT+TGG 0.359466 tig0026958:+56541 Msa1432180:CDS
TGGGGCAGGTGTAGCGGCCT+TGG 0.370641 tig0026958:-55423 None:intergenic
GAATATGCTTTGCGTTTGTT+TGG 0.372537 tig0026958:-54772 None:intergenic
TGTAGTGTTCTTAGTGGTCT+CGG 0.374105 tig0026958:-54814 None:intergenic
CGCCTCCGGTTCTCCCTCAC+CGG 0.374150 tig0026958:+56459 Msa1432180:CDS
AGAGTAACACTTAACAAAAC+TGG 0.383012 tig0026958:+56286 Msa1432180:CDS
TGACAGAACCACCTGGAGAC+TGG 0.395337 tig0026958:-56504 None:intergenic
GCCACTCCGCCTTCCGCCTC+CGG 0.397842 tig0026958:+56445 Msa1432180:CDS
GTGCTTCATTCTATACCAAC+TGG 0.401088 tig0026958:+54983 Msa1432180:CDS
ACCCCTTCTTCCCAGTCTCC+AGG 0.402610 tig0026958:+56493 Msa1432180:CDS
TCGTTCAATGTCACGGTAGC+TGG 0.403067 tig0026958:-55224 None:intergenic
ATGAAAGAACTTAATTTGTA+AGG 0.407461 tig0026958:-54725 None:intergenic
TCACCGACGGTGTAAGTAAC+AGG 0.416106 tig0026958:-55497 None:intergenic
TAAGCAGCAGCACCGTTAGA+TGG 0.418533 tig0026958:-55539 None:intergenic
AAGAACTAAGACACGCTCAT+AGG 0.421558 tig0026958:-54589 None:intergenic
GAAGGAGAAGGTGATGTGGC+AGG 0.422952 tig0026958:-56394 None:intergenic
TCTCGCAAGTCTTTCAAAGT+TGG 0.423148 tig0026958:+55575 Msa1432180:CDS
AGACCCCGGTGAGGGAGAAC+CGG 0.423247 tig0026958:-56464 None:intergenic
GACTGGGAAGAAGGGGTGAC+AGG 0.424292 tig0026958:-56487 None:intergenic
TTGTTAAGTGTTACTCTCAC+TGG 0.424897 tig0026958:-56280 None:intergenic
TGTCCAGCTGAACAATGTCC+TGG 0.428453 tig0026958:-55278 None:intergenic
ACCGTGACATTGAACGAAAC+AGG 0.440151 tig0026958:+55230 Msa1432180:CDS
CTTGGAGTTGGAGCAGAAAC+AGG 0.440341 tig0026958:-55338 None:intergenic
CCTGCTCCAGCTCCTGCTAC+TGG 0.441017 tig0026958:+55473 Msa1432180:CDS
GTGCAAATGATCCATGGAAC+AGG 0.441402 tig0026958:-54909 None:intergenic
GCTACCACTACCAACATTGA+TGG 0.445225 tig0026958:-56365 None:intergenic
TTGTAATTGGTAATGCATAT+TGG 0.445798 tig0026958:+56851 Msa1432180:three_prime_UTR
AGAATGAAGCACCGTTGGTT+GGG 0.451694 tig0026958:-54972 None:intergenic
GCACCGGAGTTCTCAGGAGG+GGG 0.455438 tig0026958:-56529 None:intergenic
GGTGGAGAAGCACTTGGAGT+TGG 0.455723 tig0026958:-55350 None:intergenic
GTAGGAGCTGGAGTAGCCTT+AGG 0.459132 tig0026958:-55371 None:intergenic
GTTACTGGACACTGCTCTGC+AGG 0.461094 tig0026958:+56331 Msa1432180:CDS
GCAGGTGTAGCGGCCTTGGT+TGG 0.463363 tig0026958:-55419 None:intergenic
GCCTCCGGTTCTCCCTCACC+GGG 0.464351 tig0026958:+56460 Msa1432180:CDS
GACGCGGCACCGGAGTTCTC+AGG 0.465593 tig0026958:-56535 None:intergenic
AACATTAAGGTTCTTTGCCA+TGG 0.467663 tig0026958:-54854 None:intergenic
GTGTAGTGTAGTGTTCTTAG+TGG 0.467698 tig0026958:-54820 None:intergenic
CCACCTGGAGACTGGGAAGA+AGG 0.472672 tig0026958:-56496 None:intergenic
GTAGTAGATGGTGCTGGGGC+AGG 0.476078 tig0026958:-55437 None:intergenic
CCGCGTCTCTTGGAGTTGCC+GGG 0.476568 tig0026958:+56551 Msa1432180:CDS
GTTGGAACGTATCAAATTGA+AGG 0.478705 tig0026958:+54632 Msa1432180:five_prime_UTR
GAAAGACTTGCGAGAAGCCC+AGG 0.480465 tig0026958:-55567 None:intergenic
GCTGGAACAGGGGTAGGAGC+TGG 0.482904 tig0026958:-55383 None:intergenic
TCATCGCCTTCTCCTTCCAC+AGG 0.484678 tig0026958:+56421 Msa1432180:CDS
CCGTCGGTGACACCATTGGC+TGG 0.488830 tig0026958:+55510 Msa1432180:CDS
TAAGTAACAGGTCCAGTAGC+AGG 0.490680 tig0026958:-55485 None:intergenic
GACAGAACCACCTGGAGACT+GGG 0.492609 tig0026958:-56503 None:intergenic
TTCAAAGTTGGAGACATCCT+TGG 0.494707 tig0026958:+55587 Msa1432180:CDS
GTTCCAGGACATTGTTCAGC+TGG 0.499514 tig0026958:+55275 Msa1432180:CDS
TCCTGTTTCGTTCAATGTCA+CGG 0.504654 tig0026958:-55231 None:intergenic
GAGGGAGAACCGGAGGCGGA+AGG 0.504963 tig0026958:-56454 None:intergenic
TAGAATGAAGCACCGTTGGT+TGG 0.509679 tig0026958:-54973 None:intergenic
CACCTGGAGACTGGGAAGAA+GGG 0.510075 tig0026958:-56495 None:intergenic
CTTTCCATCAATGTTGGTAG+TGG 0.510316 tig0026958:+56361 Msa1432180:CDS
GGCGATGAGGCGGAAGGAGA+AGG 0.513509 tig0026958:-56406 None:intergenic
GTAGCGGCCTTGGTTGGTGC+CGG 0.513837 tig0026958:-55413 None:intergenic
GGTAGCTGGACTGTTTGTTA+AGG 0.513870 tig0026958:-55210 None:intergenic
GTGCTGCTGCTTATACAACC+TGG 0.514286 tig0026958:+55549 Msa1432180:CDS
TGCAAAGGTTATAAAAGCGT+TGG 0.514287 tig0026958:+56928 Msa1432180:three_prime_UTR
GTAAGGACAATATGTTTCGT+TGG 0.514686 tig0026958:-54708 None:intergenic
CCAGTAGCAGGAGCTGGAGC+AGG 0.514710 tig0026958:-55473 None:intergenic
ACAGGTCCAGTAGCAGGAGC+TGG 0.516512 tig0026958:-55479 None:intergenic
AGAACTAAGACACGCTCATA+GGG 0.519705 tig0026958:-54588 None:intergenic
AGCAGCACCGTTAGATGGAA+TGG 0.523720 tig0026958:-55534 None:intergenic
GAAGCAGTAGTAGATGGTGC+TGG 0.524239 tig0026958:-55443 None:intergenic
TCCAAGTGCTTCTCCACCTA+AGG 0.524590 tig0026958:+55355 Msa1432180:CDS
GGCGGAGTGGCACCTGTGGA+AGG 0.524949 tig0026958:-56433 None:intergenic
GTGGCACCTGTGGAAGGAGA+AGG 0.526612 tig0026958:-56427 None:intergenic
AAGCAGTAGTAGATGGTGCT+GGG 0.527160 tig0026958:-55442 None:intergenic
CAAAAGCTTTCCATCAATGT+TGG 0.527473 tig0026958:+56355 Msa1432180:CDS
AACTCCAAGAGACGCGGCAC+CGG 0.528242 tig0026958:-56545 None:intergenic
GTGACAGGAGACCCCGGTGA+GGG 0.529596 tig0026958:-56472 None:intergenic
GTAGTGTTCTTAGTGGTCTC+GGG 0.532612 tig0026958:-54813 None:intergenic
CGGTGAGGGAGAACCGGAGG+CGG 0.533082 tig0026958:-56458 None:intergenic
TGCTGCTGCTTATACAACCT+GGG 0.535411 tig0026958:+55550 Msa1432180:CDS
GGGTTGCTGAAAGTTGCAAT+TGG 0.537641 tig0026958:-56256 None:intergenic
GGTATAGAATGAAGCACCGT+TGG 0.538174 tig0026958:-54977 None:intergenic
AAAAGCACCGGCACCAACCA+AGG 0.541334 tig0026958:+55406 Msa1432180:CDS
TGGTGCTGGGGCAGGTGTAG+CGG 0.541610 tig0026958:-55429 None:intergenic
GCAGGAGCTGGAGCAGGTGT+TGG 0.542881 tig0026958:-55467 None:intergenic
GTGCAAGACTTGAGAGTCGT+TGG 0.544315 tig0026958:-54668 None:intergenic
TACACCGTCGGTGACACCAT+TGG 0.546097 tig0026958:+55506 Msa1432180:CDS
TTAAGTGTTACTCTCACTGG+TGG 0.550431 tig0026958:-56277 None:intergenic
GGAGAAGGCGATGAGGCGGA+AGG 0.552275 tig0026958:-56412 None:intergenic
GGAGAACCGGAGGCGGAAGG+CGG 0.556109 tig0026958:-56451 None:intergenic
ACCTGGAGACTGGGAAGAAG+GGG 0.556112 tig0026958:-56494 None:intergenic
GCCTTAGGTGGAGAAGCACT+TGG 0.556300 tig0026958:-55356 None:intergenic
GCAGTGTTCAATTATGCAAG+TGG 0.556563 tig0026958:+55119 Msa1432180:intron
AAGGAGAAGGTGATGTGGCA+GGG 0.559165 tig0026958:-56393 None:intergenic
GTTGGTGAAGCAGTAGTAGA+TGG 0.562949 tig0026958:-55449 None:intergenic
TGGACAACATGATGTTGCTA+AGG 0.564994 tig0026958:+55139 Msa1432180:CDS
CCCCGGTGAGGGAGAACCGG+AGG 0.568850 tig0026958:-56461 None:intergenic
TGCAGCTGCAATTGAGAGGA+CGG 0.569204 tig0026958:-56584 None:intergenic
AGATGGAATGGTCCAGCCAA+TGG 0.572806 tig0026958:-55522 None:intergenic
GAGATGAGATGCTAATTAGG+AGG 0.573955 tig0026958:+56640 Msa1432180:three_prime_UTR
GGCACCGGAGTTCTCAGGAG+GGG 0.576346 tig0026958:-56530 None:intergenic
TTGTTTGTGCAAATGATCCA+TGG 0.576582 tig0026958:-54915 None:intergenic
GGCTGGACCATTCCATCTAA+CGG 0.581650 tig0026958:+55527 Msa1432180:CDS
CCAGCCAATGGTGTCACCGA+CGG 0.581738 tig0026958:-55510 None:intergenic
CCCTGTTCCAGCAAAAGCAC+CGG 0.587423 tig0026958:+55394 Msa1432180:CDS
CACCGGAGTTCTCAGGAGGG+GGG 0.588751 tig0026958:-56528 None:intergenic
GAGAGTCGTTGGCGTTTACA+CGG 0.589723 tig0026958:-54657 None:intergenic
GAAGGGGTGACAGGAGACCC+CGG 0.590847 tig0026958:-56478 None:intergenic
TGCTTCATTCTATACCAACT+GGG 0.590943 tig0026958:+54984 Msa1432180:CDS
ACCGGAGGCGGAAGGCGGAG+TGG 0.594091 tig0026958:-56446 None:intergenic
ACAGCTTACGATAGTTGCAA+TGG 0.598738 tig0026958:+55170 Msa1432180:CDS
GCGGCACCGGAGTTCTCAGG+AGG 0.599451 tig0026958:-56532 None:intergenic
GTTGCTGCAAACCTGTTCCA+TGG 0.601439 tig0026958:+54898 Msa1432180:CDS
TAAGTGTTACTCTCACTGGT+GGG 0.601887 tig0026958:-56276 None:intergenic
TTCACTGTAGGCGACACTCT+CGG 0.604689 tig0026958:+55021 Msa1432180:CDS
AGCTGAACAATGTCCTGGAA+CGG 0.608366 tig0026958:-55273 None:intergenic
GGACCTGTTACTTACACCGT+CGG 0.610193 tig0026958:+55494 Msa1432180:CDS
GGAGCTGGAGTAGCCTTAGG+TGG 0.618274 tig0026958:-55368 None:intergenic
CCTTCTTCCCAGTCTCCAGG+TGG 0.619545 tig0026958:+56496 Msa1432180:CDS
GGAAGGCGGAGTGGCACCTG+TGG 0.619926 tig0026958:-56437 None:intergenic
CGGCACCGGAGTTCTCAGGA+GGG 0.620355 tig0026958:-56531 None:intergenic
AAAATGCAGCTGCAATTGAG+AGG 0.622849 tig0026958:-56588 None:intergenic
GGAAGGAGAAGGCGATGAGG+CGG 0.623870 tig0026958:-56416 None:intergenic
GAGAGTGTCGCCTACAGTGA+AGG 0.626729 tig0026958:-55019 None:intergenic
GGTACTCATTACTATATCTG+TGG 0.633939 tig0026958:+56307 Msa1432180:CDS
CCCGGCAACTCCAAGAGACG+CGG 0.637522 tig0026958:-56551 None:intergenic
GAGGACGGTGACAAATAACC+CGG 0.639473 tig0026958:-56569 None:intergenic
TCCAACAAAACCTTCACTGT+AGG 0.644441 tig0026958:+55009 Msa1432180:CDS
CCAATTGAATGCACACAACG+TGG 0.647358 tig0026958:+56189 Msa1432180:CDS
ATTTGCACAAACAAGACATG+TGG 0.650443 tig0026958:+54924 Msa1432180:CDS
GGTGACAGGAGACCCCGGTG+AGG 0.653268 tig0026958:-56473 None:intergenic
ACAGCGGACTATCAGAATCA+CGG 0.656084 tig0026958:+56889 Msa1432180:three_prime_UTR
CATGTGGTTGGTGATACCAC+AGG 0.660891 tig0026958:+54940 Msa1432180:CDS
CTACACTACACAAACAACCA+TGG 0.662752 tig0026958:+54837 Msa1432180:exon
GGCGGAAGGAGAAGGTGATG+TGG 0.668642 tig0026958:-56398 None:intergenic
CAACGTGGAAGAAGTGACAA+AGG 0.672668 tig0026958:+56204 Msa1432180:CDS
GGTTGGACTATCCCAACCAA+CGG 0.674561 tig0026958:+54961 Msa1432180:CDS
AGCAGTAGTAGATGGTGCTG+GGG 0.674917 tig0026958:-55441 None:intergenic
TGTGGAAGGAGAAGGCGATG+AGG 0.677050 tig0026958:-56419 None:intergenic
GCACAAACAAGACATGTGGT+TGG 0.685878 tig0026958:+54928 Msa1432180:CDS
GGTTGGGATAGTCCAACCTG+TGG 0.687809 tig0026958:-54956 None:intergenic
TGGTTGGTGATACCACAGGT+TGG 0.725223 tig0026958:+54944 Msa1432180:CDS
CCTCCGGTTCTCCCTCACCG+GGG 0.753255 tig0026958:+56461 Msa1432180:CDS
GTGTATGATTGATATCACAG+CGG 0.797976 tig0026958:+56873 Msa1432180:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCATATTCAAATTAG+TGG - tig0026958:55886-55905 None:intergenic 15.0%
!!! AAATAAATAAACACTTTTGT+TGG + tig0026958:56789-56808 Msa1432180:three_prime_UTR 15.0%
!!! AATAAATAAACACTTTTGTT+GGG + tig0026958:56790-56809 Msa1432180:three_prime_UTR 15.0%
!! ATTAATCATATTCAAATTAG+TGG - tig0026958:55886-55905 None:intergenic 15.0%
!!! AAATAAATAAACACTTTTGT+TGG + tig0026958:56789-56808 Msa1432180:three_prime_UTR 15.0%
!!! AATAAATAAACACTTTTGTT+GGG + tig0026958:56790-56809 Msa1432180:three_prime_UTR 15.0%
!!! ATGAAAGAACTTAATTTGTA+AGG - tig0026958:54728-54747 None:intergenic 20.0%
!! TATACCTATTAATCAAGAAT+GGG - tig0026958:55826-55845 None:intergenic 20.0%
!! ATATACCTATTAATCAAGAA+TGG - tig0026958:55827-55846 None:intergenic 20.0%
!! GATTAACAAAATTCAATACA+TGG + tig0026958:55942-55961 Msa1432180:intron 20.0%
!! GTATATATTAATCAAGAGAT+CGG - tig0026958:55980-55999 None:intergenic 20.0%
!!! TTTAGATGTATAATTTTGTG+AGG + tig0026958:56124-56143 Msa1432180:intron 20.0%
!!! TTTGTTATTGTGTTTTTTTG+AGG + tig0026958:56705-56724 Msa1432180:three_prime_UTR 20.0%
!!! ACTATTTCTTGATTGTTATT+TGG + tig0026958:56823-56842 Msa1432180:three_prime_UTR 20.0%
!!! CTATTTCTTGATTGTTATTT+GGG + tig0026958:56824-56843 Msa1432180:three_prime_UTR 20.0%
!!! AAACTGTTATATTTTTGCAA+AGG + tig0026958:56913-56932 Msa1432180:three_prime_UTR 20.0%
!!! ATGAAAGAACTTAATTTGTA+AGG - tig0026958:54728-54747 None:intergenic 20.0%
!! TATACCTATTAATCAAGAAT+GGG - tig0026958:55826-55845 None:intergenic 20.0%
!! ATATACCTATTAATCAAGAA+TGG - tig0026958:55827-55846 None:intergenic 20.0%
!! GATTAACAAAATTCAATACA+TGG + tig0026958:55942-55961 Msa1432180:intron 20.0%
!! GTATATATTAATCAAGAGAT+CGG - tig0026958:55980-55999 None:intergenic 20.0%
!!! TTTAGATGTATAATTTTGTG+AGG + tig0026958:56124-56143 Msa1432180:intron 20.0%
!!! TTTGTTATTGTGTTTTTTTG+AGG + tig0026958:56705-56724 Msa1432180:three_prime_UTR 20.0%
!!! ACTATTTCTTGATTGTTATT+TGG + tig0026958:56823-56842 Msa1432180:three_prime_UTR 20.0%
!!! CTATTTCTTGATTGTTATTT+GGG + tig0026958:56824-56843 Msa1432180:three_prime_UTR 20.0%
!!! AAACTGTTATATTTTTGCAA+AGG + tig0026958:56913-56932 Msa1432180:three_prime_UTR 20.0%
! ATGTTTCGTTGGTATTTATA+GGG - tig0026958:54700-54719 None:intergenic 25.0%
! TATGTTTCGTTGGTATTTAT+AGG - tig0026958:54701-54720 None:intergenic 25.0%
! AAGCATATTCCTATAAAAAC+AGG + tig0026958:54785-54804 Msa1432180:five_prime_UTR 25.0%
! AGCATATTCCTATAAAAACA+GGG + tig0026958:54786-54805 Msa1432180:five_prime_UTR 25.0%
! GAACAAAAACAAGAACATTA+AGG - tig0026958:54870-54889 None:intergenic 25.0%
! TAAACGAATCAAAATGACAA+GGG - tig0026958:55067-55086 None:intergenic 25.0%
! ATAAACGAATCAAAATGACA+AGG - tig0026958:55068-55087 None:intergenic 25.0%
! ATACCTATTAATCAAGAATG+GGG - tig0026958:55825-55844 None:intergenic 25.0%
!! TTAGGTATCTAAAATTGTTG+TGG + tig0026958:56056-56075 Msa1432180:intron 25.0%
! TGATTTATTTGTGTGATTCT+TGG + tig0026958:56675-56694 Msa1432180:three_prime_UTR 25.0%
!! TTATTTGGGATAGTTGTAAT+TGG + tig0026958:56838-56857 Msa1432180:three_prime_UTR 25.0%
!!! TTGTAATTGGTAATGCATAT+TGG + tig0026958:56851-56870 Msa1432180:three_prime_UTR 25.0%
! ATGTTTCGTTGGTATTTATA+GGG - tig0026958:54700-54719 None:intergenic 25.0%
! TATGTTTCGTTGGTATTTAT+AGG - tig0026958:54701-54720 None:intergenic 25.0%
! AAGCATATTCCTATAAAAAC+AGG + tig0026958:54785-54804 Msa1432180:five_prime_UTR 25.0%
! AGCATATTCCTATAAAAACA+GGG + tig0026958:54786-54805 Msa1432180:five_prime_UTR 25.0%
! GAACAAAAACAAGAACATTA+AGG - tig0026958:54870-54889 None:intergenic 25.0%
! TAAACGAATCAAAATGACAA+GGG - tig0026958:55067-55086 None:intergenic 25.0%
! ATAAACGAATCAAAATGACA+AGG - tig0026958:55068-55087 None:intergenic 25.0%
! ATACCTATTAATCAAGAATG+GGG - tig0026958:55825-55844 None:intergenic 25.0%
!! TTAGGTATCTAAAATTGTTG+TGG + tig0026958:56056-56075 Msa1432180:intron 25.0%
! TGATTTATTTGTGTGATTCT+TGG + tig0026958:56675-56694 Msa1432180:three_prime_UTR 25.0%
!! TTATTTGGGATAGTTGTAAT+TGG + tig0026958:56838-56857 Msa1432180:three_prime_UTR 25.0%
!!! TTGTAATTGGTAATGCATAT+TGG + tig0026958:56851-56870 Msa1432180:three_prime_UTR 25.0%
!!! AGCTTTTTTGTCCATAATGT+TGG + tig0026958:54614-54633 Msa1432180:five_prime_UTR 30.0%
TTTGATACGTTCCAACATTA+TGG - tig0026958:54628-54647 None:intergenic 30.0%
GTTGGTATTTATAGGGAAAA+AGG - tig0026958:54693-54712 None:intergenic 30.0%
GCATATTCCTATAAAAACAG+GGG + tig0026958:54787-54806 Msa1432180:five_prime_UTR 30.0%
CAGTGTTAGATTTGATTAAC+CGG + tig0026958:55703-55722 Msa1432180:intron 30.0%
AGTGTTAGATTTGATTAACC+GGG + tig0026958:55704-55723 Msa1432180:intron 30.0%
TTAACCAGGTTGTTGAATTT+AGG + tig0026958:56038-56057 Msa1432180:intron 30.0%
AGAGTAACACTTAACAAAAC+TGG + tig0026958:56286-56305 Msa1432180:CDS 30.0%
!!! AGCTTTTTTGTCCATAATGT+TGG + tig0026958:54614-54633 Msa1432180:five_prime_UTR 30.0%
TTTGATACGTTCCAACATTA+TGG - tig0026958:54628-54647 None:intergenic 30.0%
GTTGGTATTTATAGGGAAAA+AGG - tig0026958:54693-54712 None:intergenic 30.0%
GCATATTCCTATAAAAACAG+GGG + tig0026958:54787-54806 Msa1432180:five_prime_UTR 30.0%
CAGTGTTAGATTTGATTAAC+CGG + tig0026958:55703-55722 Msa1432180:intron 30.0%
AGTGTTAGATTTGATTAACC+GGG + tig0026958:55704-55723 Msa1432180:intron 30.0%
TTAACCAGGTTGTTGAATTT+AGG + tig0026958:56038-56057 Msa1432180:intron 30.0%
AGAGTAACACTTAACAAAAC+TGG + tig0026958:56286-56305 Msa1432180:CDS 30.0%
GTTGGAACGTATCAAATTGA+AGG + tig0026958:54632-54651 Msa1432180:five_prime_UTR 35.0%
GTAAGGACAATATGTTTCGT+TGG - tig0026958:54711-54730 None:intergenic 35.0%
GAATATGCTTTGCGTTTGTT+TGG - tig0026958:54775-54794 None:intergenic 35.0%
AACATTAAGGTTCTTTGCCA+TGG - tig0026958:54857-54876 None:intergenic 35.0%
TTGTTTGTGCAAATGATCCA+TGG - tig0026958:54918-54937 None:intergenic 35.0%
ATTTGCACAAACAAGACATG+TGG + tig0026958:54924-54943 Msa1432180:CDS 35.0%
TGCTTCATTCTATACCAACT+GGG + tig0026958:54984-55003 Msa1432180:CDS 35.0%
TCAATAACCATGACTTACCA+AGG - tig0026958:55607-55626 None:intergenic 35.0%
AGATTTGATTAACCGGGAAA+TGG + tig0026958:55710-55729 Msa1432180:intron 35.0%
ATAGATTACACATTACCCTC+TGG + tig0026958:55773-55792 Msa1432180:intron 35.0%
GATACCTAAATTCAACAACC+TGG - tig0026958:56045-56064 None:intergenic 35.0%
! TTGTTAAGTGTTACTCTCAC+TGG - tig0026958:56283-56302 None:intergenic 35.0%
GGTACTCATTACTATATCTG+TGG + tig0026958:56307-56326 Msa1432180:CDS 35.0%
!! TACTATATCTGTGGTGTTAC+TGG + tig0026958:56316-56335 Msa1432180:CDS 35.0%
! CAACATTGATGGAAAGCTTT+TGG - tig0026958:56357-56376 None:intergenic 35.0%
CAAAAGCTTTCCATCAATGT+TGG + tig0026958:56355-56374 Msa1432180:CDS 35.0%
GATGAGATGAGATGCTAATT+AGG + tig0026958:56637-56656 Msa1432180:three_prime_UTR 35.0%
! CTGTTCATCTACTACAGTTT+TGG + tig0026958:56752-56771 Msa1432180:three_prime_UTR 35.0%
GTGTATGATTGATATCACAG+CGG + tig0026958:56873-56892 Msa1432180:three_prime_UTR 35.0%
! TGCAAAGGTTATAAAAGCGT+TGG + tig0026958:56928-56947 Msa1432180:three_prime_UTR 35.0%
GTTGGAACGTATCAAATTGA+AGG + tig0026958:54632-54651 Msa1432180:five_prime_UTR 35.0%
GTAAGGACAATATGTTTCGT+TGG - tig0026958:54711-54730 None:intergenic 35.0%
GAATATGCTTTGCGTTTGTT+TGG - tig0026958:54775-54794 None:intergenic 35.0%
AACATTAAGGTTCTTTGCCA+TGG - tig0026958:54857-54876 None:intergenic 35.0%
TTGTTTGTGCAAATGATCCA+TGG - tig0026958:54918-54937 None:intergenic 35.0%
ATTTGCACAAACAAGACATG+TGG + tig0026958:54924-54943 Msa1432180:CDS 35.0%
TGCTTCATTCTATACCAACT+GGG + tig0026958:54984-55003 Msa1432180:CDS 35.0%
TCAATAACCATGACTTACCA+AGG - tig0026958:55607-55626 None:intergenic 35.0%
AGATTTGATTAACCGGGAAA+TGG + tig0026958:55710-55729 Msa1432180:intron 35.0%
ATAGATTACACATTACCCTC+TGG + tig0026958:55773-55792 Msa1432180:intron 35.0%
GATACCTAAATTCAACAACC+TGG - tig0026958:56045-56064 None:intergenic 35.0%
! TTGTTAAGTGTTACTCTCAC+TGG - tig0026958:56283-56302 None:intergenic 35.0%
GGTACTCATTACTATATCTG+TGG + tig0026958:56307-56326 Msa1432180:CDS 35.0%
!! TACTATATCTGTGGTGTTAC+TGG + tig0026958:56316-56335 Msa1432180:CDS 35.0%
! CAACATTGATGGAAAGCTTT+TGG - tig0026958:56357-56376 None:intergenic 35.0%
CAAAAGCTTTCCATCAATGT+TGG + tig0026958:56355-56374 Msa1432180:CDS 35.0%
GATGAGATGAGATGCTAATT+AGG + tig0026958:56637-56656 Msa1432180:three_prime_UTR 35.0%
! CTGTTCATCTACTACAGTTT+TGG + tig0026958:56752-56771 Msa1432180:three_prime_UTR 35.0%
GTGTATGATTGATATCACAG+CGG + tig0026958:56873-56892 Msa1432180:three_prime_UTR 35.0%
! TGCAAAGGTTATAAAAGCGT+TGG + tig0026958:56928-56947 Msa1432180:three_prime_UTR 35.0%
AGAACTAAGACACGCTCATA+GGG - tig0026958:54591-54610 None:intergenic 40.0%
AAGAACTAAGACACGCTCAT+AGG - tig0026958:54592-54611 None:intergenic 40.0%
TGTAGTGTTCTTAGTGGTCT+CGG - tig0026958:54817-54836 None:intergenic 40.0%
GTGTAGTGTAGTGTTCTTAG+TGG - tig0026958:54823-54842 None:intergenic 40.0%
CTACACTACACAAACAACCA+TGG + tig0026958:54837-54856 Msa1432180:exon 40.0%
GTGCTTCATTCTATACCAAC+TGG + tig0026958:54983-55002 Msa1432180:CDS 40.0%
TCCAACAAAACCTTCACTGT+AGG + tig0026958:55009-55028 Msa1432180:CDS 40.0%
GCAGTGTTCAATTATGCAAG+TGG + tig0026958:55119-55138 Msa1432180:intron 40.0%
TGGACAACATGATGTTGCTA+AGG + tig0026958:55139-55158 Msa1432180:CDS 40.0%
ACAGCTTACGATAGTTGCAA+TGG + tig0026958:55170-55189 Msa1432180:CDS 40.0%
TCCTGTTTCGTTCAATGTCA+CGG - tig0026958:55234-55253 None:intergenic 40.0%
TCTCGCAAGTCTTTCAAAGT+TGG + tig0026958:55575-55594 Msa1432180:CDS 40.0%
TTCAAAGTTGGAGACATCCT+TGG + tig0026958:55587-55606 Msa1432180:CDS 40.0%
! TACGGTGATTTTCACACAAG+AGG + tig0026958:55740-55759 Msa1432180:intron 40.0%
TGAAAGTCACAACACATGAG+AGG + tig0026958:55798-55817 Msa1432180:intron 40.0%
GGACCCCATTCTTGATTAAT+AGG + tig0026958:55819-55838 Msa1432180:intron 40.0%
GTGTGTGAAATGCATTAACC+AGG + tig0026958:56024-56043 Msa1432180:intron 40.0%
! TAAGTGTTACTCTCACTGGT+GGG - tig0026958:56279-56298 None:intergenic 40.0%
! TTAAGTGTTACTCTCACTGG+TGG - tig0026958:56280-56299 None:intergenic 40.0%
! CTTTCCATCAATGTTGGTAG+TGG + tig0026958:56361-56380 Msa1432180:CDS 40.0%
AAAATGCAGCTGCAATTGAG+AGG - tig0026958:56591-56610 None:intergenic 40.0%
GAGATGAGATGCTAATTAGG+AGG + tig0026958:56640-56659 Msa1432180:three_prime_UTR 40.0%
AGAACTAAGACACGCTCATA+GGG - tig0026958:54591-54610 None:intergenic 40.0%
AAGAACTAAGACACGCTCAT+AGG - tig0026958:54592-54611 None:intergenic 40.0%
TGTAGTGTTCTTAGTGGTCT+CGG - tig0026958:54817-54836 None:intergenic 40.0%
GTGTAGTGTAGTGTTCTTAG+TGG - tig0026958:54823-54842 None:intergenic 40.0%
CTACACTACACAAACAACCA+TGG + tig0026958:54837-54856 Msa1432180:exon 40.0%
GTGCTTCATTCTATACCAAC+TGG + tig0026958:54983-55002 Msa1432180:CDS 40.0%
TCCAACAAAACCTTCACTGT+AGG + tig0026958:55009-55028 Msa1432180:CDS 40.0%
GCAGTGTTCAATTATGCAAG+TGG + tig0026958:55119-55138 Msa1432180:intron 40.0%
TGGACAACATGATGTTGCTA+AGG + tig0026958:55139-55158 Msa1432180:CDS 40.0%
ACAGCTTACGATAGTTGCAA+TGG + tig0026958:55170-55189 Msa1432180:CDS 40.0%
TCCTGTTTCGTTCAATGTCA+CGG - tig0026958:55234-55253 None:intergenic 40.0%
TCTCGCAAGTCTTTCAAAGT+TGG + tig0026958:55575-55594 Msa1432180:CDS 40.0%
TTCAAAGTTGGAGACATCCT+TGG + tig0026958:55587-55606 Msa1432180:CDS 40.0%
! TACGGTGATTTTCACACAAG+AGG + tig0026958:55740-55759 Msa1432180:intron 40.0%
TGAAAGTCACAACACATGAG+AGG + tig0026958:55798-55817 Msa1432180:intron 40.0%
GGACCCCATTCTTGATTAAT+AGG + tig0026958:55819-55838 Msa1432180:intron 40.0%
GTGTGTGAAATGCATTAACC+AGG + tig0026958:56024-56043 Msa1432180:intron 40.0%
! TAAGTGTTACTCTCACTGGT+GGG - tig0026958:56279-56298 None:intergenic 40.0%
! TTAAGTGTTACTCTCACTGG+TGG - tig0026958:56280-56299 None:intergenic 40.0%
! CTTTCCATCAATGTTGGTAG+TGG + tig0026958:56361-56380 Msa1432180:CDS 40.0%
AAAATGCAGCTGCAATTGAG+AGG - tig0026958:56591-56610 None:intergenic 40.0%
GAGATGAGATGCTAATTAGG+AGG + tig0026958:56640-56659 Msa1432180:three_prime_UTR 40.0%
GTAGTGTTCTTAGTGGTCTC+GGG - tig0026958:54816-54835 None:intergenic 45.0%
GTGCAAATGATCCATGGAAC+AGG - tig0026958:54912-54931 None:intergenic 45.0%
GCACAAACAAGACATGTGGT+TGG + tig0026958:54928-54947 Msa1432180:CDS 45.0%
!! AGAATGAAGCACCGTTGGTT+GGG - tig0026958:54975-54994 None:intergenic 45.0%
!! TAGAATGAAGCACCGTTGGT+TGG - tig0026958:54976-54995 None:intergenic 45.0%
!! GGTATAGAATGAAGCACCGT+TGG - tig0026958:54980-54999 None:intergenic 45.0%
!! GCCTACAGTGAAGGTTTTGT+TGG - tig0026958:55013-55032 None:intergenic 45.0%
! GGTAGCTGGACTGTTTGTTA+AGG - tig0026958:55213-55232 None:intergenic 45.0%
ACCGTGACATTGAACGAAAC+AGG + tig0026958:55230-55249 Msa1432180:CDS 45.0%
! AACTTCATTTGTGCCGTTCC+AGG + tig0026958:55260-55279 Msa1432180:CDS 45.0%
AGCTGAACAATGTCCTGGAA+CGG - tig0026958:55276-55295 None:intergenic 45.0%
AAGCAGTAGTAGATGGTGCT+GGG - tig0026958:55445-55464 None:intergenic 45.0%
! GTTGGTGAAGCAGTAGTAGA+TGG - tig0026958:55452-55471 None:intergenic 45.0%
TAAGTAACAGGTCCAGTAGC+AGG - tig0026958:55488-55507 None:intergenic 45.0%
! TGCTGCTGCTTATACAACCT+GGG + tig0026958:55550-55569 Msa1432180:CDS 45.0%
GAGACATCCTTGGTAAGTCA+TGG + tig0026958:55597-55616 Msa1432180:intron 45.0%
CCGTATGATGATCCATTTCC+CGG - tig0026958:55725-55744 None:intergenic 45.0%
CCGGGAAATGGATCATCATA+CGG + tig0026958:55722-55741 Msa1432180:intron 45.0%
GTTGTGACTTTCACACCAGA+GGG - tig0026958:55791-55810 None:intergenic 45.0%
TGTTGTGACTTTCACACCAG+AGG - tig0026958:55792-55811 None:intergenic 45.0%
CCACGTTGTGTGCATTCAAT+TGG - tig0026958:56192-56211 None:intergenic 45.0%
CCAATTGAATGCACACAACG+TGG + tig0026958:56189-56208 Msa1432180:CDS 45.0%
CAACGTGGAAGAAGTGACAA+AGG + tig0026958:56204-56223 Msa1432180:CDS 45.0%
GGGTTGCTGAAAGTTGCAAT+TGG - tig0026958:56259-56278 None:intergenic 45.0%
GCTACCACTACCAACATTGA+TGG - tig0026958:56368-56387 None:intergenic 45.0%
!! ACAGCGGACTATCAGAATCA+CGG + tig0026958:56889-56908 Msa1432180:three_prime_UTR 45.0%
GTAGTGTTCTTAGTGGTCTC+GGG - tig0026958:54816-54835 None:intergenic 45.0%
GTGCAAATGATCCATGGAAC+AGG - tig0026958:54912-54931 None:intergenic 45.0%
GCACAAACAAGACATGTGGT+TGG + tig0026958:54928-54947 Msa1432180:CDS 45.0%
!! AGAATGAAGCACCGTTGGTT+GGG - tig0026958:54975-54994 None:intergenic 45.0%
!! TAGAATGAAGCACCGTTGGT+TGG - tig0026958:54976-54995 None:intergenic 45.0%
!! GGTATAGAATGAAGCACCGT+TGG - tig0026958:54980-54999 None:intergenic 45.0%
!! GCCTACAGTGAAGGTTTTGT+TGG - tig0026958:55013-55032 None:intergenic 45.0%
! GGTAGCTGGACTGTTTGTTA+AGG - tig0026958:55213-55232 None:intergenic 45.0%
ACCGTGACATTGAACGAAAC+AGG + tig0026958:55230-55249 Msa1432180:CDS 45.0%
! AACTTCATTTGTGCCGTTCC+AGG + tig0026958:55260-55279 Msa1432180:CDS 45.0%
AGCTGAACAATGTCCTGGAA+CGG - tig0026958:55276-55295 None:intergenic 45.0%
AAGCAGTAGTAGATGGTGCT+GGG - tig0026958:55445-55464 None:intergenic 45.0%
! GTTGGTGAAGCAGTAGTAGA+TGG - tig0026958:55452-55471 None:intergenic 45.0%
TAAGTAACAGGTCCAGTAGC+AGG - tig0026958:55488-55507 None:intergenic 45.0%
! TGCTGCTGCTTATACAACCT+GGG + tig0026958:55550-55569 Msa1432180:CDS 45.0%
GAGACATCCTTGGTAAGTCA+TGG + tig0026958:55597-55616 Msa1432180:intron 45.0%
CCGTATGATGATCCATTTCC+CGG - tig0026958:55725-55744 None:intergenic 45.0%
CCGGGAAATGGATCATCATA+CGG + tig0026958:55722-55741 Msa1432180:intron 45.0%
GTTGTGACTTTCACACCAGA+GGG - tig0026958:55791-55810 None:intergenic 45.0%
TGTTGTGACTTTCACACCAG+AGG - tig0026958:55792-55811 None:intergenic 45.0%
CCACGTTGTGTGCATTCAAT+TGG - tig0026958:56192-56211 None:intergenic 45.0%
CCAATTGAATGCACACAACG+TGG + tig0026958:56189-56208 Msa1432180:CDS 45.0%
CAACGTGGAAGAAGTGACAA+AGG + tig0026958:56204-56223 Msa1432180:CDS 45.0%
GGGTTGCTGAAAGTTGCAAT+TGG - tig0026958:56259-56278 None:intergenic 45.0%
GCTACCACTACCAACATTGA+TGG - tig0026958:56368-56387 None:intergenic 45.0%
!! ACAGCGGACTATCAGAATCA+CGG + tig0026958:56889-56908 Msa1432180:three_prime_UTR 45.0%
GAGAGTCGTTGGCGTTTACA+CGG - tig0026958:54660-54679 None:intergenic 50.0%
GTGCAAGACTTGAGAGTCGT+TGG - tig0026958:54671-54690 None:intergenic 50.0%
GTTGCTGCAAACCTGTTCCA+TGG + tig0026958:54898-54917 Msa1432180:CDS 50.0%
!! CATGTGGTTGGTGATACCAC+AGG + tig0026958:54940-54959 Msa1432180:CDS 50.0%
!! TGGTTGGTGATACCACAGGT+TGG + tig0026958:54944-54963 Msa1432180:CDS 50.0%
GGTTGGACTATCCCAACCAA+CGG + tig0026958:54961-54980 Msa1432180:CDS 50.0%
!!! GGTTTTGTTGGAAGCCCAGT+TGG - tig0026958:55001-55020 None:intergenic 50.0%
TTCACTGTAGGCGACACTCT+CGG + tig0026958:55021-55040 Msa1432180:CDS 50.0%
TCGTTCAATGTCACGGTAGC+TGG - tig0026958:55227-55246 None:intergenic 50.0%
GTTCCAGGACATTGTTCAGC+TGG + tig0026958:55275-55294 Msa1432180:CDS 50.0%
TGTCCAGCTGAACAATGTCC+TGG - tig0026958:55281-55300 None:intergenic 50.0%
CTTGGAGTTGGAGCAGAAAC+AGG - tig0026958:55341-55360 None:intergenic 50.0%
TCCAAGTGCTTCTCCACCTA+AGG + tig0026958:55355-55374 Msa1432180:CDS 50.0%
! AGCAGTAGTAGATGGTGCTG+GGG - tig0026958:55444-55463 None:intergenic 50.0%
GAAGCAGTAGTAGATGGTGC+TGG - tig0026958:55446-55465 None:intergenic 50.0%
! GGACCTGTTACTTACACCGT+CGG + tig0026958:55494-55513 Msa1432180:CDS 50.0%
TCACCGACGGTGTAAGTAAC+AGG - tig0026958:55500-55519 None:intergenic 50.0%
AGATGGAATGGTCCAGCCAA+TGG - tig0026958:55525-55544 None:intergenic 50.0%
GGCTGGACCATTCCATCTAA+CGG + tig0026958:55527-55546 Msa1432180:CDS 50.0%
AGCAGCACCGTTAGATGGAA+TGG - tig0026958:55537-55556 None:intergenic 50.0%
TAAGCAGCAGCACCGTTAGA+TGG - tig0026958:55542-55561 None:intergenic 50.0%
! GTGCTGCTGCTTATACAACC+TGG + tig0026958:55549-55568 Msa1432180:CDS 50.0%
AAGGAGAAGGTGATGTGGCA+GGG - tig0026958:56396-56415 None:intergenic 50.0%
GAGGACGGTGACAAATAACC+CGG - tig0026958:56572-56591 None:intergenic 50.0%
TGCAGCTGCAATTGAGAGGA+CGG - tig0026958:56587-56606 None:intergenic 50.0%
GAGAGTCGTTGGCGTTTACA+CGG - tig0026958:54660-54679 None:intergenic 50.0%
GTGCAAGACTTGAGAGTCGT+TGG - tig0026958:54671-54690 None:intergenic 50.0%
GTTGCTGCAAACCTGTTCCA+TGG + tig0026958:54898-54917 Msa1432180:CDS 50.0%
!! CATGTGGTTGGTGATACCAC+AGG + tig0026958:54940-54959 Msa1432180:CDS 50.0%
!! TGGTTGGTGATACCACAGGT+TGG + tig0026958:54944-54963 Msa1432180:CDS 50.0%
GGTTGGACTATCCCAACCAA+CGG + tig0026958:54961-54980 Msa1432180:CDS 50.0%
!!! GGTTTTGTTGGAAGCCCAGT+TGG - tig0026958:55001-55020 None:intergenic 50.0%
TTCACTGTAGGCGACACTCT+CGG + tig0026958:55021-55040 Msa1432180:CDS 50.0%
TCGTTCAATGTCACGGTAGC+TGG - tig0026958:55227-55246 None:intergenic 50.0%
GTTCCAGGACATTGTTCAGC+TGG + tig0026958:55275-55294 Msa1432180:CDS 50.0%
TGTCCAGCTGAACAATGTCC+TGG - tig0026958:55281-55300 None:intergenic 50.0%
CTTGGAGTTGGAGCAGAAAC+AGG - tig0026958:55341-55360 None:intergenic 50.0%
TCCAAGTGCTTCTCCACCTA+AGG + tig0026958:55355-55374 Msa1432180:CDS 50.0%
! AGCAGTAGTAGATGGTGCTG+GGG - tig0026958:55444-55463 None:intergenic 50.0%
GAAGCAGTAGTAGATGGTGC+TGG - tig0026958:55446-55465 None:intergenic 50.0%
! GGACCTGTTACTTACACCGT+CGG + tig0026958:55494-55513 Msa1432180:CDS 50.0%
TCACCGACGGTGTAAGTAAC+AGG - tig0026958:55500-55519 None:intergenic 50.0%
AGATGGAATGGTCCAGCCAA+TGG - tig0026958:55525-55544 None:intergenic 50.0%
GGCTGGACCATTCCATCTAA+CGG + tig0026958:55527-55546 Msa1432180:CDS 50.0%
AGCAGCACCGTTAGATGGAA+TGG - tig0026958:55537-55556 None:intergenic 50.0%
TAAGCAGCAGCACCGTTAGA+TGG - tig0026958:55542-55561 None:intergenic 50.0%
! GTGCTGCTGCTTATACAACC+TGG + tig0026958:55549-55568 Msa1432180:CDS 50.0%
AAGGAGAAGGTGATGTGGCA+GGG - tig0026958:56396-56415 None:intergenic 50.0%
GAGGACGGTGACAAATAACC+CGG - tig0026958:56572-56591 None:intergenic 50.0%
TGCAGCTGCAATTGAGAGGA+CGG - tig0026958:56587-56606 None:intergenic 50.0%
!!! CGGGTCGCCCCTGTTTTTAT+AGG - tig0026958:54797-54816 None:intergenic 55.0%
GGTTGGGATAGTCCAACCTG+TGG - tig0026958:54959-54978 None:intergenic 55.0%
!! GAGAGTGTCGCCTACAGTGA+AGG - tig0026958:55022-55041 None:intergenic 55.0%
!! GGTGGAGAAGCACTTGGAGT+TGG - tig0026958:55353-55372 None:intergenic 55.0%
!! GCCTTAGGTGGAGAAGCACT+TGG - tig0026958:55359-55378 None:intergenic 55.0%
GTAGGAGCTGGAGTAGCCTT+AGG - tig0026958:55374-55393 None:intergenic 55.0%
! GCTTTTGCTGGAACAGGGGT+AGG - tig0026958:55392-55411 None:intergenic 55.0%
! CGGTGCTTTTGCTGGAACAG+GGG - tig0026958:55396-55415 None:intergenic 55.0%
! CCGGTGCTTTTGCTGGAACA+GGG - tig0026958:55397-55416 None:intergenic 55.0%
! CCCTGTTCCAGCAAAAGCAC+CGG + tig0026958:55394-55413 Msa1432180:CDS 55.0%
!! AAAAGCACCGGCACCAACCA+AGG + tig0026958:55406-55425 Msa1432180:CDS 55.0%
TACACCGTCGGTGACACCAT+TGG + tig0026958:55506-55525 Msa1432180:CDS 55.0%
GAAAGACTTGCGAGAAGCCC+AGG - tig0026958:55570-55589 None:intergenic 55.0%
GTTACTGGACACTGCTCTGC+AGG + tig0026958:56331-56350 Msa1432180:CDS 55.0%
GAAGGAGAAGGTGATGTGGC+AGG - tig0026958:56397-56416 None:intergenic 55.0%
TGTGGAAGGAGAAGGCGATG+AGG - tig0026958:56422-56441 None:intergenic 55.0%
TCATCGCCTTCTCCTTCCAC+AGG + tig0026958:56421-56440 Msa1432180:CDS 55.0%
ACCTGGAGACTGGGAAGAAG+GGG - tig0026958:56497-56516 None:intergenic 55.0%
CACCTGGAGACTGGGAAGAA+GGG - tig0026958:56498-56517 None:intergenic 55.0%
GACAGAACCACCTGGAGACT+GGG - tig0026958:56506-56525 None:intergenic 55.0%
TGACAGAACCACCTGGAGAC+TGG - tig0026958:56507-56526 None:intergenic 55.0%
!!! CGGGTCGCCCCTGTTTTTAT+AGG - tig0026958:54797-54816 None:intergenic 55.0%
GGTTGGGATAGTCCAACCTG+TGG - tig0026958:54959-54978 None:intergenic 55.0%
!! GAGAGTGTCGCCTACAGTGA+AGG - tig0026958:55022-55041 None:intergenic 55.0%
!! GGTGGAGAAGCACTTGGAGT+TGG - tig0026958:55353-55372 None:intergenic 55.0%
!! GCCTTAGGTGGAGAAGCACT+TGG - tig0026958:55359-55378 None:intergenic 55.0%
GTAGGAGCTGGAGTAGCCTT+AGG - tig0026958:55374-55393 None:intergenic 55.0%
! GCTTTTGCTGGAACAGGGGT+AGG - tig0026958:55392-55411 None:intergenic 55.0%
! CGGTGCTTTTGCTGGAACAG+GGG - tig0026958:55396-55415 None:intergenic 55.0%
! CCGGTGCTTTTGCTGGAACA+GGG - tig0026958:55397-55416 None:intergenic 55.0%
! CCCTGTTCCAGCAAAAGCAC+CGG + tig0026958:55394-55413 Msa1432180:CDS 55.0%
!! AAAAGCACCGGCACCAACCA+AGG + tig0026958:55406-55425 Msa1432180:CDS 55.0%
TACACCGTCGGTGACACCAT+TGG + tig0026958:55506-55525 Msa1432180:CDS 55.0%
GAAAGACTTGCGAGAAGCCC+AGG - tig0026958:55570-55589 None:intergenic 55.0%
GTTACTGGACACTGCTCTGC+AGG + tig0026958:56331-56350 Msa1432180:CDS 55.0%
GAAGGAGAAGGTGATGTGGC+AGG - tig0026958:56397-56416 None:intergenic 55.0%
TGTGGAAGGAGAAGGCGATG+AGG - tig0026958:56422-56441 None:intergenic 55.0%
TCATCGCCTTCTCCTTCCAC+AGG + tig0026958:56421-56440 Msa1432180:CDS 55.0%
ACCTGGAGACTGGGAAGAAG+GGG - tig0026958:56497-56516 None:intergenic 55.0%
CACCTGGAGACTGGGAAGAA+GGG - tig0026958:56498-56517 None:intergenic 55.0%
GACAGAACCACCTGGAGACT+GGG - tig0026958:56506-56525 None:intergenic 55.0%
TGACAGAACCACCTGGAGAC+TGG - tig0026958:56507-56526 None:intergenic 55.0%
! GGAGCTGGAGTAGCCTTAGG+TGG - tig0026958:55371-55390 None:intergenic 60.0%
! GCCGGTGCTTTTGCTGGAAC+AGG - tig0026958:55398-55417 None:intergenic 60.0%
!!! GTTGGTGCCGGTGCTTTTGC+TGG - tig0026958:55404-55423 None:intergenic 60.0%
! GTAGTAGATGGTGCTGGGGC+AGG - tig0026958:55440-55459 None:intergenic 60.0%
ACAGGTCCAGTAGCAGGAGC+TGG - tig0026958:55482-55501 None:intergenic 60.0%
!! CCAGCCAATGGTGTCACCGA+CGG - tig0026958:55513-55532 None:intergenic 60.0%
GGCGGAAGGAGAAGGTGATG+TGG - tig0026958:56401-56420 None:intergenic 60.0%
GGAAGGAGAAGGCGATGAGG+CGG - tig0026958:56419-56438 None:intergenic 60.0%
GTGGCACCTGTGGAAGGAGA+AGG - tig0026958:56430-56449 None:intergenic 60.0%
GACTGGGAAGAAGGGGTGAC+AGG - tig0026958:56490-56509 None:intergenic 60.0%
ACCCCTTCTTCCCAGTCTCC+AGG + tig0026958:56493-56512 Msa1432180:CDS 60.0%
CCACCTGGAGACTGGGAAGA+AGG - tig0026958:56499-56518 None:intergenic 60.0%
CCTTCTTCCCAGTCTCCAGG+TGG + tig0026958:56496-56515 Msa1432180:CDS 60.0%
AACTCCAAGAGACGCGGCAC+CGG - tig0026958:56548-56567 None:intergenic 60.0%
! GGAGCTGGAGTAGCCTTAGG+TGG - tig0026958:55371-55390 None:intergenic 60.0%
! GCCGGTGCTTTTGCTGGAAC+AGG - tig0026958:55398-55417 None:intergenic 60.0%
!!! GTTGGTGCCGGTGCTTTTGC+TGG - tig0026958:55404-55423 None:intergenic 60.0%
! GTAGTAGATGGTGCTGGGGC+AGG - tig0026958:55440-55459 None:intergenic 60.0%
ACAGGTCCAGTAGCAGGAGC+TGG - tig0026958:55482-55501 None:intergenic 60.0%
!! CCAGCCAATGGTGTCACCGA+CGG - tig0026958:55513-55532 None:intergenic 60.0%
GGCGGAAGGAGAAGGTGATG+TGG - tig0026958:56401-56420 None:intergenic 60.0%
GGAAGGAGAAGGCGATGAGG+CGG - tig0026958:56419-56438 None:intergenic 60.0%
GTGGCACCTGTGGAAGGAGA+AGG - tig0026958:56430-56449 None:intergenic 60.0%
GACTGGGAAGAAGGGGTGAC+AGG - tig0026958:56490-56509 None:intergenic 60.0%
ACCCCTTCTTCCCAGTCTCC+AGG + tig0026958:56493-56512 Msa1432180:CDS 60.0%
CCACCTGGAGACTGGGAAGA+AGG - tig0026958:56499-56518 None:intergenic 60.0%
CCTTCTTCCCAGTCTCCAGG+TGG + tig0026958:56496-56515 Msa1432180:CDS 60.0%
AACTCCAAGAGACGCGGCAC+CGG - tig0026958:56548-56567 None:intergenic 60.0%
GCTGGAACAGGGGTAGGAGC+TGG - tig0026958:55386-55405 None:intergenic 65.0%
! GTAGCGGCCTTGGTTGGTGC+CGG - tig0026958:55416-55435 None:intergenic 65.0%
GCAGGTGTAGCGGCCTTGGT+TGG - tig0026958:55422-55441 None:intergenic 65.0%
! TGGTGCTGGGGCAGGTGTAG+CGG - tig0026958:55432-55451 None:intergenic 65.0%
GCAGGAGCTGGAGCAGGTGT+TGG - tig0026958:55470-55489 None:intergenic 65.0%
CCAGTAGCAGGAGCTGGAGC+AGG - tig0026958:55476-55495 None:intergenic 65.0%
CCTGCTCCAGCTCCTGCTAC+TGG + tig0026958:55473-55492 Msa1432180:CDS 65.0%
CCGTCGGTGACACCATTGGC+TGG + tig0026958:55510-55529 Msa1432180:CDS 65.0%
GGCGATGAGGCGGAAGGAGA+AGG - tig0026958:56409-56428 None:intergenic 65.0%
GGAGAAGGCGATGAGGCGGA+AGG - tig0026958:56415-56434 None:intergenic 65.0%
AGACCCCGGTGAGGGAGAAC+CGG - tig0026958:56467-56486 None:intergenic 65.0%
GTGACAGGAGACCCCGGTGA+GGG - tig0026958:56475-56494 None:intergenic 65.0%
GAAGGGGTGACAGGAGACCC+CGG - tig0026958:56481-56500 None:intergenic 65.0%
AGCCCCCCTCCTGAGAACTC+CGG + tig0026958:56526-56545 Msa1432180:CDS 65.0%
CACCGGAGTTCTCAGGAGGG+GGG - tig0026958:56531-56550 None:intergenic 65.0%
GCACCGGAGTTCTCAGGAGG+GGG - tig0026958:56532-56551 None:intergenic 65.0%
! GGCACCGGAGTTCTCAGGAG+GGG - tig0026958:56533-56552 None:intergenic 65.0%
! CGGCACCGGAGTTCTCAGGA+GGG - tig0026958:56534-56553 None:intergenic 65.0%
!! AACTCCGGTGCCGCGTCTCT+TGG + tig0026958:56541-56560 Msa1432180:CDS 65.0%
GCCGCGTCTCTTGGAGTTGC+CGG + tig0026958:56550-56569 Msa1432180:CDS 65.0%
CCCGGCAACTCCAAGAGACG+CGG - tig0026958:56554-56573 None:intergenic 65.0%
CCGCGTCTCTTGGAGTTGCC+GGG + tig0026958:56551-56570 Msa1432180:CDS 65.0%
GCTGGAACAGGGGTAGGAGC+TGG - tig0026958:55386-55405 None:intergenic 65.0%
! GTAGCGGCCTTGGTTGGTGC+CGG - tig0026958:55416-55435 None:intergenic 65.0%
GCAGGTGTAGCGGCCTTGGT+TGG - tig0026958:55422-55441 None:intergenic 65.0%
! TGGTGCTGGGGCAGGTGTAG+CGG - tig0026958:55432-55451 None:intergenic 65.0%
GCAGGAGCTGGAGCAGGTGT+TGG - tig0026958:55470-55489 None:intergenic 65.0%
CCAGTAGCAGGAGCTGGAGC+AGG - tig0026958:55476-55495 None:intergenic 65.0%
CCTGCTCCAGCTCCTGCTAC+TGG + tig0026958:55473-55492 Msa1432180:CDS 65.0%
CCGTCGGTGACACCATTGGC+TGG + tig0026958:55510-55529 Msa1432180:CDS 65.0%
GGCGATGAGGCGGAAGGAGA+AGG - tig0026958:56409-56428 None:intergenic 65.0%
GGAGAAGGCGATGAGGCGGA+AGG - tig0026958:56415-56434 None:intergenic 65.0%
AGACCCCGGTGAGGGAGAAC+CGG - tig0026958:56467-56486 None:intergenic 65.0%
GTGACAGGAGACCCCGGTGA+GGG - tig0026958:56475-56494 None:intergenic 65.0%
GAAGGGGTGACAGGAGACCC+CGG - tig0026958:56481-56500 None:intergenic 65.0%
AGCCCCCCTCCTGAGAACTC+CGG + tig0026958:56526-56545 Msa1432180:CDS 65.0%
CACCGGAGTTCTCAGGAGGG+GGG - tig0026958:56531-56550 None:intergenic 65.0%
GCACCGGAGTTCTCAGGAGG+GGG - tig0026958:56532-56551 None:intergenic 65.0%
! GGCACCGGAGTTCTCAGGAG+GGG - tig0026958:56533-56552 None:intergenic 65.0%
! CGGCACCGGAGTTCTCAGGA+GGG - tig0026958:56534-56553 None:intergenic 65.0%
!! AACTCCGGTGCCGCGTCTCT+TGG + tig0026958:56541-56560 Msa1432180:CDS 65.0%
GCCGCGTCTCTTGGAGTTGC+CGG + tig0026958:56550-56569 Msa1432180:CDS 65.0%
CCCGGCAACTCCAAGAGACG+CGG - tig0026958:56554-56573 None:intergenic 65.0%
CCGCGTCTCTTGGAGTTGCC+GGG + tig0026958:56551-56570 Msa1432180:CDS 65.0%
TGGGGCAGGTGTAGCGGCCT+TGG - tig0026958:55426-55445 None:intergenic 70.0%
GGCGGAGTGGCACCTGTGGA+AGG - tig0026958:56436-56455 None:intergenic 70.0%
GGAAGGCGGAGTGGCACCTG+TGG - tig0026958:56440-56459 None:intergenic 70.0%
GGAGAACCGGAGGCGGAAGG+CGG - tig0026958:56454-56473 None:intergenic 70.0%
GAGGGAGAACCGGAGGCGGA+AGG - tig0026958:56457-56476 None:intergenic 70.0%
CGGTGAGGGAGAACCGGAGG+CGG - tig0026958:56461-56480 None:intergenic 70.0%
CGCCTCCGGTTCTCCCTCAC+CGG + tig0026958:56459-56478 Msa1432180:CDS 70.0%
GCCTCCGGTTCTCCCTCACC+GGG + tig0026958:56460-56479 Msa1432180:CDS 70.0%
CCTCCGGTTCTCCCTCACCG+GGG + tig0026958:56461-56480 Msa1432180:CDS 70.0%
GGTGACAGGAGACCCCGGTG+AGG - tig0026958:56476-56495 None:intergenic 70.0%
GGGGGGCTGACAGAACCACC+TGG - tig0026958:56514-56533 None:intergenic 70.0%
! GCGGCACCGGAGTTCTCAGG+AGG - tig0026958:56535-56554 None:intergenic 70.0%
! GACGCGGCACCGGAGTTCTC+AGG - tig0026958:56538-56557 None:intergenic 70.0%
TGGGGCAGGTGTAGCGGCCT+TGG - tig0026958:55426-55445 None:intergenic 70.0%
GGCGGAGTGGCACCTGTGGA+AGG - tig0026958:56436-56455 None:intergenic 70.0%
GGAAGGCGGAGTGGCACCTG+TGG - tig0026958:56440-56459 None:intergenic 70.0%
GGAGAACCGGAGGCGGAAGG+CGG - tig0026958:56454-56473 None:intergenic 70.0%
GAGGGAGAACCGGAGGCGGA+AGG - tig0026958:56457-56476 None:intergenic 70.0%
CGGTGAGGGAGAACCGGAGG+CGG - tig0026958:56461-56480 None:intergenic 70.0%
CGCCTCCGGTTCTCCCTCAC+CGG + tig0026958:56459-56478 Msa1432180:CDS 70.0%
GCCTCCGGTTCTCCCTCACC+GGG + tig0026958:56460-56479 Msa1432180:CDS 70.0%
CCTCCGGTTCTCCCTCACCG+GGG + tig0026958:56461-56480 Msa1432180:CDS 70.0%
GGTGACAGGAGACCCCGGTG+AGG - tig0026958:56476-56495 None:intergenic 70.0%
GGGGGGCTGACAGAACCACC+TGG - tig0026958:56514-56533 None:intergenic 70.0%
! GCGGCACCGGAGTTCTCAGG+AGG - tig0026958:56535-56554 None:intergenic 70.0%
! GACGCGGCACCGGAGTTCTC+AGG - tig0026958:56538-56557 None:intergenic 70.0%
GCCACTCCGCCTTCCGCCTC+CGG + tig0026958:56445-56464 Msa1432180:CDS 75.0%
ACCGGAGGCGGAAGGCGGAG+TGG - tig0026958:56449-56468 None:intergenic 75.0%
CCCCGGTGAGGGAGAACCGG+AGG - tig0026958:56464-56483 None:intergenic 75.0%
GCCACTCCGCCTTCCGCCTC+CGG + tig0026958:56445-56464 Msa1432180:CDS 75.0%
ACCGGAGGCGGAAGGCGGAG+TGG - tig0026958:56449-56468 None:intergenic 75.0%
CCCCGGTGAGGGAGAACCGG+AGG - tig0026958:56464-56483 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0026958 gene 54574 56956 54574 ID=Msa1432180;Name=Msa1432180
tig0026958 mRNA 54574 56956 54574 ID=Msa1432180-mRNA-1;Parent=Msa1432180;Name=Msa1432180-mRNA-1;_AED=0.12;_eAED=0.12;_QI=282|1|1|1|1|1|3|338|370
tig0026958 exon 54574 55042 54574 ID=Msa1432180-mRNA-1:exon:7921;Parent=Msa1432180-mRNA-1
tig0026958 exon 55123 55608 55123 ID=Msa1432180-mRNA-1:exon:7922;Parent=Msa1432180-mRNA-1
tig0026958 exon 56179 56956 56179 ID=Msa1432180-mRNA-1:exon:7923;Parent=Msa1432180-mRNA-1
tig0026958 five_prime_UTR 54574 54855 54574 ID=Msa1432180-mRNA-1:five_prime_utr;Parent=Msa1432180-mRNA-1
tig0026958 CDS 54856 55042 54856 ID=Msa1432180-mRNA-1:cds;Parent=Msa1432180-mRNA-1
tig0026958 CDS 55123 55608 55123 ID=Msa1432180-mRNA-1:cds;Parent=Msa1432180-mRNA-1
tig0026958 CDS 56179 56618 56179 ID=Msa1432180-mRNA-1:cds;Parent=Msa1432180-mRNA-1
tig0026958 three_prime_UTR 56619 56956 56619 ID=Msa1432180-mRNA-1:three_prime_utr;Parent=Msa1432180-mRNA-1
Gene Sequence

>Msa1432180

ATGGCAAAGAACCTTAATGTTCTTGTTTTTGTTCTACTTGCAGTTGCTGCAAACCTGTTCCATGGATCATTTGCACAAACAAGACATGTGGTTGGTGATACCACAGGTTGGACTATCCCAACCAACGGTGCTTCATTCTATACCAACTGGGCTTCCAACAAAACCTTCACTGTAGGCGACACTCTCGTGTTCAATTATGCAAGTGGACAACATGATGTTGCTAAGGTAACAAAAACAGCTTACGATAGTTGCAATGGAGCAAACACACTTTTCACCTTAACAAACAGTCCAGCTACCGTGACATTGAACGAAACAGGACAACAAAACTTCATTTGTGCCGTTCCAGGACATTGTTCAGCTGGACAAAAACTTTCAATTAACGTTGTTAAAGCTTCTACTTCACCTGTTTCTGCTCCAACTCCAAGTGCTTCTCCACCTAAGGCTACTCCAGCTCCTACCCCTGTTCCAGCAAAAGCACCGGCACCAACCAAGGCCGCTACACCTGCCCCAGCACCATCTACTACTGCTTCACCAACACCTGCTCCAGCTCCTGCTACTGGACCTGTTACTTACACCGTCGGTGACACCATTGGCTGGACCATTCCATCTAACGGTGCTGCTGCTTATACAACCTGGGCTTCTCGCAAGTCTTTCAAAGTTGGAGACATCCTTGTTTTCAATTTCCAATTGAATGCACACAACGTGGAAGAAGTGACAAAGGAAAAGTATGATTCATGCAACTCAGCTTCTCCAATTGCAACTTTCAGCAACCCACCAGTGAGAGTAACACTTAACAAAACTGGTACTCATTACTATATCTGTGGTGTTACTGGACACTGCTCTGCAGGCCAAAAGCTTTCCATCAATGTTGGTAGTGGTAGCAGCAGCCCTGCCACATCACCTTCTCCTTCCGCCTCATCGCCTTCTCCTTCCACAGGTGCCACTCCGCCTTCCGCCTCCGGTTCTCCCTCACCGGGGTCTCCTGTCACCCCTTCTTCCCAGTCTCCAGGTGGTTCTGTCAGCCCCCCTCCTGAGAACTCCGGTGCCGCGTCTCTTGGAGTTGCCGGGTTATTTGTCACCGTCCTCTCAATTGCAGCTGCATTTTTCTGTTAG
Protein sequence

>Msa1432180

MAKNLNVLVFVLLAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNYASGQHDVAKVTKTAYDSCNGANTLFTLTNSPATVTLNETGQQNFICAVPGHCSAGQKLSINVVKASTSPVSAPTPSASPPKATPAPTPVPAKAPAPTKAATPAPAPSTTASPTPAPAPATGPVTYTVGDTIGWTIPSNGAAAYTTWASRKSFKVGDILVFNFQLNAHNVEEVTKEKYDSCNSASPIATFSNPPVRVTLNKTGTHYYICGVTGHCSAGQKLSINVGSGSSSPATSPSPSASSPSPSTGATPPSASGSPSPGSPVTPSSQSPGGSVSPPPENSGAASLGVAGLFVTVLSIAAAFFC*