AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331950 MtrunA17_Chr4g0064041 97.297 370 10 0 1 370 1 370 0.0 704
Msa1331950 MtrunA17_Chr6g0483981 52.475 202 66 5 1 184 1 190 6.81e-51 178
Msa1331950 MtrunA17_Chr6g0483981 48.227 141 66 3 190 327 26 162 1.95e-31 125
Msa1331950 MtrunA17_Chr2g0306461 46.875 128 65 3 1 128 1 125 1.58e-31 118
Msa1331950 MtrunA17_Chr2g0306461 47.273 110 56 2 181 290 18 125 5.99e-28 108
Msa1331950 MtrunA17_Chr5g0394321 43.885 139 70 4 29 166 26 157 2.43e-31 117
Msa1331950 MtrunA17_Chr5g0394321 37.931 174 85 4 190 362 25 176 1.71e-30 115
Msa1331950 MtrunA17_Chr4g0033131 44.531 128 66 4 3 128 5 129 1.09e-30 115
Msa1331950 MtrunA17_Chr4g0033131 42.017 119 65 2 185 301 22 138 5.30e-26 102
Msa1331950 MtrunA17_Chr4g0033531 44.531 128 66 4 3 128 5 129 1.09e-30 115
Msa1331950 MtrunA17_Chr4g0033531 42.017 119 65 2 185 301 22 138 5.30e-26 102
Msa1331950 MtrunA17_Chr1g0205701 41.497 147 79 3 190 336 24 163 2.78e-27 106
Msa1331950 MtrunA17_Chr1g0205701 41.096 146 76 3 31 176 27 162 1.45e-25 102
Msa1331950 MtrunA17_Chr3g0132431 44.828 116 59 2 27 142 24 134 1.48e-26 104
Msa1331950 MtrunA17_Chr3g0132431 41.985 131 67 4 180 309 18 140 1.77e-24 99.0
Msa1331950 MtrunA17_Chr3g0132441 49.020 102 47 2 27 128 24 120 7.19e-26 102
Msa1331950 MtrunA17_Chr3g0132441 50.000 100 45 2 191 290 26 120 1.14e-24 99.4
Msa1331950 MtrunA17_Chr3g0132701 48.544 103 48 2 27 128 24 122 5.13e-25 101
Msa1331950 MtrunA17_Chr3g0132701 45.690 116 55 3 176 290 14 122 4.62e-24 98.6
Msa1331950 MtrunA17_Chr3g0132511 48.544 103 48 2 27 128 24 122 5.48e-25 101
Msa1331950 MtrunA17_Chr3g0132511 45.690 116 55 3 176 290 14 122 5.92e-24 98.6
Msa1331950 MtrunA17_Chr8g0387804 36.434 129 79 2 1 128 1 127 2.01e-24 97.1
Msa1331950 MtrunA17_Chr8g0387804 36.634 101 63 1 190 290 28 127 2.10e-16 75.1
Msa1331950 MtrunA17_Chr1g0196801 35.526 152 85 3 190 341 22 160 1.77e-23 95.9
Msa1331950 MtrunA17_Chr1g0196801 35.200 125 74 3 27 149 21 140 1.24e-16 77.0
Msa1331950 MtrunA17_Chr1g0150131 40.000 120 67 2 194 311 29 145 4.00e-23 95.1
Msa1331950 MtrunA17_Chr1g0150131 33.333 138 89 2 13 147 9 146 5.76e-19 84.0
Msa1331950 MtrunA17_Chr8g0335531 40.698 172 84 7 1 170 1 156 1.30e-22 94.0
Msa1331950 MtrunA17_Chr8g0335531 34.615 182 91 6 191 365 24 184 7.39e-20 86.3
Msa1331950 MtrunA17_Chr6g0458331 42.574 101 55 2 191 290 37 135 6.48e-22 91.3
Msa1331950 MtrunA17_Chr6g0458331 38.679 106 62 2 25 129 33 136 6.99e-18 80.5
Msa1331950 MtrunA17_Chr8g0360371 39.130 115 67 2 191 305 24 135 8.71e-22 94.4
Msa1331950 MtrunA17_Chr8g0360371 29.577 213 112 6 5 189 7 209 4.12e-18 84.0
Msa1331950 MtrunA17_Chr2g0331181 36.913 149 72 6 191 336 27 156 1.65e-21 90.9
Msa1331950 MtrunA17_Chr2g0331181 34.437 151 95 3 11 160 9 156 5.04e-20 87.0
Msa1331950 MtrunA17_Chr3g0132411 41.818 110 59 2 191 300 65 169 2.03e-21 90.1
Msa1331950 MtrunA17_Chr3g0132411 37.963 108 62 2 27 134 63 165 1.42e-14 71.2
Msa1331950 MtrunA17_Chr2g0323021 35.256 156 93 5 9 163 6 154 2.56e-21 91.3
Msa1331950 MtrunA17_Chr2g0323021 41.964 112 57 3 198 309 33 136 6.55e-21 90.5
Msa1331950 MtrunA17_Chr4g0064031 40.984 122 69 3 25 144 25 145 9.78e-21 88.2
Msa1331950 MtrunA17_Chr4g0064031 40.816 98 55 3 191 285 28 125 1.80e-18 81.6
Msa1331950 MtrunA17_Chr1g0211101 34.884 129 69 3 190 307 32 156 2.54e-20 87.4
Msa1331950 MtrunA17_Chr1g0211101 30.345 145 94 4 11 154 16 154 1.44e-16 77.0
Msa1331950 MtrunA17_Chr2g0301431 40.000 120 61 5 11 127 12 123 3.28e-20 85.5
Msa1331950 MtrunA17_Chr2g0301431 39.394 99 53 2 191 289 32 123 9.23e-17 75.9
Msa1331950 MtrunA17_Chr7g0253701 37.795 127 64 4 9 129 6 123 3.76e-20 86.3
Msa1331950 MtrunA17_Chr7g0253701 40.594 101 55 2 191 290 26 122 4.79e-15 72.0
Msa1331950 MtrunA17_Chr7g0253671 37.795 127 64 4 9 129 6 123 3.76e-20 86.3
Msa1331950 MtrunA17_Chr7g0253671 40.594 101 55 2 191 290 26 122 4.79e-15 72.0
Msa1331950 MtrunA17_Chr1g0177341 37.190 121 71 2 11 130 7 123 9.91e-20 85.1
Msa1331950 MtrunA17_Chr1g0177341 41.584 101 54 2 191 290 25 121 4.51e-17 77.8
Msa1331950 MtrunA17_Chr1g0177331 37.190 121 71 2 11 130 7 123 9.91e-20 85.1
Msa1331950 MtrunA17_Chr1g0177331 41.584 101 54 2 191 290 25 121 4.51e-17 77.8
Msa1331950 MtrunA17_Chr8g0335571 43.137 102 51 3 191 290 24 120 1.83e-19 85.5
Msa1331950 MtrunA17_Chr8g0335571 41.935 124 60 5 10 131 10 123 1.91e-18 82.8
Msa1331950 MtrunA17_Chr7g0253631 37.500 120 71 1 9 128 6 121 3.38e-19 85.9
Msa1331950 MtrunA17_Chr7g0253631 36.275 102 57 3 191 290 26 121 4.20e-13 68.6
Msa1331950 MtrunA17_Chr7g0253681 37.500 128 64 5 9 129 6 124 4.09e-19 83.6
Msa1331950 MtrunA17_Chr7g0253681 38.261 115 66 2 177 290 13 123 1.87e-16 76.3
Msa1331950 MtrunA17_Chr2g0317231 37.624 101 61 1 190 290 24 122 4.48e-19 89.0
Msa1331950 MtrunA17_Chr2g0317231 29.457 129 85 3 1 129 1 123 2.16e-12 68.6
Msa1331950 MtrunA17_Chr4g0062341 32.394 142 85 4 191 330 32 164 5.12e-19 84.0
Msa1331950 MtrunA17_Chr4g0062341 32.000 150 87 4 27 174 30 166 1.65e-16 77.0
Msa1331950 MtrunA17_Chr4g0062311 32.394 142 85 4 191 330 32 164 5.12e-19 84.0
Msa1331950 MtrunA17_Chr4g0062311 32.000 150 87 4 27 174 30 166 1.65e-16 77.0
Msa1331950 MtrunA17_Chr8g0380711 41.584 101 51 3 190 289 27 120 5.48e-19 82.0
Msa1331950 MtrunA17_Chr8g0380711 42.268 97 50 1 31 127 30 120 2.63e-18 80.1
Msa1331950 MtrunA17_Chr4g0041811 38.235 102 63 0 191 292 32 133 6.96e-19 84.3
Msa1331950 MtrunA17_Chr4g0041811 32.000 100 68 0 30 129 33 132 9.60e-14 70.1
Msa1331950 MtrunA17_Chr3g0136871 36.607 112 70 1 194 304 31 142 1.74e-18 82.4
Msa1331950 MtrunA17_Chr3g0136871 28.916 166 96 3 25 190 24 167 6.96e-14 69.3
Msa1331950 MtrunA17_Chr2g0324721 31.953 169 108 4 191 355 27 192 1.84e-18 82.8
Msa1331950 MtrunA17_Chr2g0324721 34.615 156 93 4 31 185 29 176 4.41e-18 81.6
Msa1331950 MtrunA17_Chr7g0253731 35.484 124 65 4 12 129 8 122 4.99e-18 80.5
Msa1331950 MtrunA17_Chr7g0253731 37.624 101 58 2 191 290 25 121 4.34e-14 69.3
Msa1331950 MtrunA17_Chr7g0253761 31.737 167 97 4 10 164 7 168 6.16e-18 80.9
Msa1331950 MtrunA17_Chr7g0253761 34.000 100 62 1 191 290 26 121 1.18e-12 65.9
Msa1331950 MtrunA17_Chr4g0039721 31.111 135 87 3 191 323 32 162 3.31e-17 79.0
Msa1331950 MtrunA17_Chr4g0039721 30.645 124 80 3 27 148 30 149 1.13e-13 68.9
Msa1331950 MtrunA17_Chr8g0380901 40.000 100 53 2 190 289 27 119 4.27e-17 76.6
Msa1331950 MtrunA17_Chr8g0380901 35.537 121 67 3 7 127 10 119 8.02e-15 70.5
Msa1331950 MtrunA17_Chr3g0125791 37.736 106 59 2 183 288 25 123 4.76e-17 76.6
Msa1331950 MtrunA17_Chr3g0125791 37.624 101 56 2 29 129 33 126 9.92e-15 70.5
Msa1331950 MtrunA17_Chr7g0253641 35.593 118 72 1 12 129 9 122 8.52e-17 79.0
Msa1331950 MtrunA17_Chr7g0253641 37.255 102 56 3 191 290 26 121 7.45e-14 70.5
Msa1331950 MtrunA17_Chr6g0459441 39.423 104 57 4 191 293 26 124 1.21e-16 77.0
Msa1331950 MtrunA17_Chr6g0459441 36.893 103 59 3 27 128 24 121 1.47e-13 68.6
Msa1331950 MtrunA17_Chr8g0385031 33.750 160 92 3 191 337 24 182 1.58e-16 79.3
Msa1331950 MtrunA17_Chr8g0385031 29.353 201 113 6 7 188 6 196 1.43e-15 76.6
Msa1331950 MtrunA17_Chr2g0324711 33.621 116 70 2 191 301 25 138 4.27e-16 79.0
Msa1331950 MtrunA17_Chr2g0324711 29.130 230 131 7 5 213 10 228 1.08e-15 77.4
Msa1331950 MtrunA17_Chr6g0481491 36.697 109 64 2 191 299 28 131 5.11e-16 76.3
Msa1331950 MtrunA17_Chr6g0481491 32.203 118 75 2 11 128 10 122 3.13e-15 73.9
Msa1331950 MtrunA17_Chr4g0040291 34.694 147 90 4 31 177 27 167 5.27e-16 75.5
Msa1331950 MtrunA17_Chr4g0040291 31.538 130 84 3 190 318 24 149 7.90e-14 69.3
Msa1331950 MtrunA17_Chr6g0453921 35.606 132 78 3 184 313 31 157 5.59e-16 75.5
Msa1331950 MtrunA17_Chr6g0453921 35.252 139 83 3 8 144 17 150 1.55e-14 71.2
Msa1331950 MtrunA17_Chr8g0385041 31.250 192 112 5 31 208 27 212 4.25e-15 75.5
Msa1331950 MtrunA17_Chr8g0385041 33.108 148 83 4 191 325 25 169 2.47e-13 70.1
Msa1331950 MtrunA17_Chr2g0319611 36.275 102 63 2 191 290 26 127 4.71e-15 74.3
Msa1331950 MtrunA17_Chr2g0319611 33.945 109 70 2 28 134 25 133 3.97e-13 68.9
Msa1331950 MtrunA17_Chr8g0385021 34.507 142 86 2 191 326 24 164 1.14e-14 73.6
Msa1331950 MtrunA17_Chr8g0385021 30.526 190 119 5 7 188 6 190 7.39e-13 68.2
Msa1331950 MtrunA17_Chr6g0453801 32.877 146 91 3 184 327 28 168 2.97e-14 70.1
Msa1331950 MtrunA17_Chr6g0453801 30.263 152 91 4 9 158 23 161 3.71e-12 64.3
Msa1331950 MtrunA17_Chr6g0453791 35.938 128 73 4 187 313 27 146 6.30e-14 69.3
Msa1331950 MtrunA17_Chr3g0125761 36.449 107 61 2 183 289 25 124 6.45e-14 68.2
Msa1331950 MtrunA17_Chr3g0125761 31.746 126 72 4 5 127 10 124 9.79e-13 64.7
Msa1331950 MtrunA17_Chr1g0188981 33.562 146 88 3 191 327 29 174 1.25e-13 68.9
Msa1331950 MtrunA17_Chr1g0188981 33.333 99 65 1 31 128 31 129 1.29e-12 66.2
Msa1331950 MtrunA17_Chr2g0289741 28.758 153 93 3 9 160 7 144 4.75e-13 66.6
Msa1331950 MtrunA17_Chr2g0289741 29.530 149 95 3 185 332 21 160 1.84e-11 62.4
Msa1331950 MtrunA17_Chr4g0001571 34.375 128 76 3 182 309 23 142 5.44e-13 66.6
Msa1331950 MtrunA17_Chr4g0001571 34.314 102 62 2 27 128 27 123 2.42e-12 64.7
Msa1331950 MtrunA17_Chr4g0073901 30.693 101 69 1 191 290 29 129 7.79e-13 66.6
Msa1331950 MtrunA17_Chr5g0441381 32.051 156 86 6 191 329 34 186 3.86e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331950 AT2G32300.1 41.497 147 82 2 9 155 6 148 2.10e-30 117
Msa1331950 AT2G32300.1 39.716 141 78 2 191 331 26 159 7.70e-24 99.8
Msa1331950 AT2G32300.2 41.497 147 82 2 9 155 36 178 7.63e-30 116
Msa1331950 AT2G32300.2 39.716 141 78 2 191 331 56 189 2.47e-23 99.0
Msa1331950 AT2G31050.1 39.655 174 96 2 10 177 10 180 2.11e-29 112
Msa1331950 AT2G31050.1 42.017 119 66 1 185 303 23 138 5.92e-25 100
Msa1331950 AT5G20230.1 46.721 122 63 2 31 151 27 147 1.95e-28 110
Msa1331950 AT5G20230.1 37.430 179 105 3 191 369 25 196 3.34e-28 109
Msa1331950 AT3G17675.1 51.923 104 42 3 27 128 30 127 5.21e-28 107
Msa1331950 AT3G17675.1 40.000 100 56 1 191 290 32 127 2.04e-20 86.7
Msa1331950 AT2G26720.1 40.426 141 81 1 1 141 1 138 2.36e-27 107
Msa1331950 AT2G26720.1 38.655 119 70 1 185 303 23 138 1.76e-22 94.4
Msa1331950 AT2G25060.1 42.149 121 61 2 192 311 32 144 1.29e-25 102
Msa1331950 AT2G25060.1 39.241 158 77 4 13 163 14 159 2.24e-23 96.3
Msa1331950 AT5G26330.1 46.000 100 52 1 191 290 24 121 1.45e-25 102
Msa1331950 AT5G26330.1 45.455 99 52 1 31 129 26 122 2.78e-22 93.6
Msa1331950 AT1G45063.2 26.780 295 169 6 9 301 9 258 1.62e-25 104
Msa1331950 AT1G45063.1 26.780 295 169 6 9 301 9 258 9.70e-25 104
Msa1331950 AT3G20570.1 38.281 128 78 1 191 318 30 156 1.44e-23 97.4
Msa1331950 AT3G20570.1 34.239 184 117 4 1 183 1 181 2.11e-20 88.6
Msa1331950 AT3G53330.1 27.698 278 165 9 31 290 27 286 5.54e-23 98.2
Msa1331950 AT4G31840.1 34.807 181 84 6 192 369 28 177 8.82e-23 94.4
Msa1331950 AT4G31840.1 31.613 155 98 1 6 160 5 151 5.55e-19 84.0
Msa1331950 AT5G53870.2 38.235 170 86 5 191 347 22 185 1.20e-21 95.5
Msa1331950 AT5G53870.2 34.066 182 106 4 10 188 12 182 2.56e-19 88.6
Msa1331950 AT5G53870.1 38.235 170 86 5 191 347 22 185 1.49e-21 95.1
Msa1331950 AT5G53870.1 34.066 182 106 4 10 188 12 182 3.33e-19 88.6
Msa1331950 AT3G60270.1 41.121 107 58 2 184 290 19 120 1.79e-21 91.3
Msa1331950 AT3G60270.1 42.574 101 53 2 31 131 28 123 1.92e-19 85.5
Msa1331950 AT5G07475.1 38.571 140 71 5 190 319 29 163 3.01e-21 90.9
Msa1331950 AT5G07475.1 38.333 120 67 3 27 144 28 142 2.74e-17 79.7
Msa1331950 AT4G28365.1 31.053 190 113 6 1 188 5 178 1.40e-20 89.0
Msa1331950 AT4G28365.1 34.737 190 93 8 191 368 29 199 4.03e-19 85.1
Msa1331950 AT4G30590.1 34.579 107 69 1 185 290 22 128 9.21e-20 86.7
Msa1331950 AT4G30590.1 33.803 142 87 3 8 145 10 148 6.94e-16 75.9
Msa1331950 AT1G79800.1 37.838 111 66 2 181 290 24 132 3.94e-19 84.7
Msa1331950 AT1G79800.1 34.454 119 71 4 31 145 36 151 3.32e-14 70.9
Msa1331950 AT5G15350.1 38.519 135 76 3 181 313 19 148 4.38e-19 84.3
Msa1331950 AT5G15350.1 33.333 117 71 3 28 142 28 139 7.68e-12 63.9
Msa1331950 AT3G27200.1 35.878 131 71 5 1 129 3 122 6.47e-18 80.9
Msa1331950 AT3G27200.1 36.634 101 58 3 191 290 26 121 9.41e-16 75.1
Msa1331950 AT1G72230.1 34.328 134 83 2 197 330 29 157 9.99e-18 80.5
Msa1331950 AT1G72230.1 31.111 180 107 4 4 183 3 165 3.04e-17 79.3
Msa1331950 AT3G60280.1 38.679 106 60 3 183 288 16 116 4.03e-17 80.1
Msa1331950 AT3G60280.1 37.624 101 58 2 31 131 26 121 4.02e-14 71.2
Msa1331950 AT5G25090.1 32.544 169 101 4 194 362 30 185 5.07e-17 79.0
Msa1331950 AT5G25090.1 36.735 98 62 0 32 129 30 127 7.29e-13 67.0
Msa1331950 AT5G14345.1 33.636 110 70 2 197 305 22 129 6.41e-17 77.4
Msa1331950 AT5G14345.1 32.110 109 71 2 36 143 23 129 3.93e-13 66.6
Msa1331950 AT2G44790.1 37.719 114 60 4 184 295 25 129 1.35e-16 78.2
Msa1331950 AT2G44790.1 40.909 88 49 2 47 132 42 128 2.16e-15 74.7
Msa1331950 AT1G64640.1 36.667 120 74 2 191 309 33 151 2.73e-16 77.0
Msa1331950 AT1G64640.1 31.081 148 94 3 8 153 10 151 1.29e-15 75.1
Msa1331950 AT4G27520.1 33.333 144 91 4 3 146 7 145 4.93e-16 79.0
Msa1331950 AT4G27520.1 34.884 129 79 3 191 317 31 156 4.93e-16 79.0
Msa1331950 AT1G22480.1 40.385 104 57 2 34 137 24 122 2.97e-15 73.6
Msa1331950 AT1G22480.1 39.000 100 56 2 196 295 24 118 2.07e-14 71.2
Msa1331950 AT1G48940.1 36.842 95 56 2 198 290 33 125 9.31e-15 72.0
Msa1331950 AT1G48940.1 31.200 125 81 3 11 132 7 129 1.95e-11 62.8
Msa1331950 AT3G18590.1 35.294 102 62 2 191 290 27 126 9.46e-15 72.4
Msa1331950 AT3G18590.1 32.000 125 78 4 8 129 7 127 3.68e-12 65.1
Msa1331950 AT5G57920.1 29.348 92 65 0 199 290 32 123 3.33e-14 70.9
Msa1331950 AT5G57920.1 27.193 114 81 1 30 141 25 138 2.06e-11 62.8
Msa1331950 AT5G57920.2 28.696 115 80 1 199 311 31 145 5.79e-14 70.1
Msa1331950 AT5G57920.2 27.193 114 81 1 30 141 24 137 5.60e-11 61.6
Msa1331950 AT2G23990.1 31.959 194 124 5 8 199 7 194 6.13e-14 70.5
Msa1331950 AT2G23990.1 32.000 100 67 1 194 292 31 130 1.13e-13 69.7
Msa1331950 AT4G12880.1 36.975 119 68 3 174 290 12 125 7.93e-14 68.6
Msa1331950 AT5G57920.3 27.642 123 87 1 199 319 64 186 9.88e-14 70.1
Msa1331950 AT5G57920.3 26.786 112 80 1 32 141 59 170 8.44e-11 61.6
Msa1331950 AT2G02850.1 34.343 99 58 2 190 288 35 126 2.41e-13 67.0
Msa1331950 AT2G02850.1 32.787 122 74 3 9 129 15 129 3.68e-13 66.2
Msa1331950 AT4G32490.1 30.818 159 97 5 31 188 33 179 3.82e-13 68.6
Msa1331950 AT4G32490.1 28.272 191 102 7 191 355 31 212 1.38e-12 67.0
Msa1331950 AT1G08500.1 34.532 139 72 5 191 311 30 167 8.16e-12 64.7
Msa1331950 AT4G01380.1 35.417 96 59 3 198 291 79 173 1.36e-11 63.9

Find 154 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTTCTTGATTGTTATT+TGG 0.083068 8_4:+51713181 Msa1331950:three_prime_UTR
TTTGATACGTTCCAACATTA+TGG 0.216064 8_4:-51710983 None:intergenic
CTATTTCTTGATTGTTATTT+GGG 0.216861 8_4:+51713182 Msa1331950:three_prime_UTR
TGATTTATTTGTGTGATTCT+TGG 0.220074 8_4:+51713033 Msa1331950:three_prime_UTR
TACTATATCTGTGGTGTTAC+TGG 0.237614 8_4:+51712674 Msa1331950:CDS
CTGTTCATCTACTACAGTTT+TGG 0.258545 8_4:+51713110 Msa1331950:three_prime_UTR
GTTGGTATTTATAGGGAAAA+AGG 0.277208 8_4:-51711048 None:intergenic
TATGTTTCGTTGGTATTTAT+AGG 0.279706 8_4:-51711056 None:intergenic
TTATTTGGGATAGTTGTAAT+TGG 0.287487 8_4:+51713196 Msa1331950:three_prime_UTR
ATGTTTCGTTGGTATTTATA+GGG 0.290046 8_4:-51711055 None:intergenic
CAACATTGATGGAAAGCTTT+TGG 0.291973 8_4:-51712712 None:intergenic
GATGAGATGAGATGCTAATT+AGG 0.295325 8_4:+51712995 Msa1331950:three_prime_UTR
GCCGCGTCTCTTGGAGTTGC+CGG 0.310336 8_4:+51712908 Msa1331950:CDS
AACTTCATTTGTGCCGTTCC+AGG 0.347262 8_4:+51711618 Msa1331950:CDS
CCACGTTGTGTGCATTCAAT+TGG 0.357168 8_4:-51712547 None:intergenic
AACTCCGGTGCCGCGTCTCT+TGG 0.359466 8_4:+51712899 Msa1331950:CDS
TGGGGCAGGTGTAGCGGCCT+TGG 0.370641 8_4:-51711781 None:intergenic
GAATATGCTTTGCGTTTGTT+TGG 0.372537 8_4:-51711130 None:intergenic
TGTAGTGTTCTTAGTGGTCT+CGG 0.374105 8_4:-51711172 None:intergenic
CGCCTCCGGTTCTCCCTCAC+CGG 0.374150 8_4:+51712817 Msa1331950:CDS
AGAGTAACACTTAACAAAAC+TGG 0.383012 8_4:+51712644 Msa1331950:CDS
TGACAGAACCACCTGGAGAC+TGG 0.395337 8_4:-51712862 None:intergenic
GCCACTCCGCCTTCCGCCTC+CGG 0.397842 8_4:+51712803 Msa1331950:CDS
GTGCTTCATTCTATACCAAC+TGG 0.401088 8_4:+51711341 Msa1331950:CDS
ACCCCTTCTTCCCAGTCTCC+AGG 0.402610 8_4:+51712851 Msa1331950:CDS
TCGTTCAATGTCACGGTAGC+TGG 0.403067 8_4:-51711582 None:intergenic
ATGAAAGAACTTAATTTGTA+AGG 0.407461 8_4:-51711083 None:intergenic
TCACCGACGGTGTAAGTAAC+AGG 0.416106 8_4:-51711855 None:intergenic
TAAGCAGCAGCACCGTTAGA+TGG 0.418533 8_4:-51711897 None:intergenic
AAGAACTAAGACACGCTCAT+AGG 0.421558 8_4:-51710947 None:intergenic
GAAGGAGAAGGTGATGTGGC+AGG 0.422952 8_4:-51712752 None:intergenic
TCTCGCAAGTCTTTCAAAGT+TGG 0.423148 8_4:+51711933 Msa1331950:CDS
AGACCCCGGTGAGGGAGAAC+CGG 0.423247 8_4:-51712822 None:intergenic
GACTGGGAAGAAGGGGTGAC+AGG 0.424292 8_4:-51712845 None:intergenic
TTGTTAAGTGTTACTCTCAC+TGG 0.424897 8_4:-51712638 None:intergenic
TGTCCAGCTGAACAATGTCC+TGG 0.428453 8_4:-51711636 None:intergenic
ACCGTGACATTGAACGAAAC+AGG 0.440151 8_4:+51711588 Msa1331950:CDS
CTTGGAGTTGGAGCAGAAAC+AGG 0.440341 8_4:-51711696 None:intergenic
CCTGCTCCAGCTCCTGCTAC+TGG 0.441017 8_4:+51711831 Msa1331950:CDS
GTGCAAATGATCCATGGAAC+AGG 0.441402 8_4:-51711267 None:intergenic
GCTACCACTACCAACATTGA+TGG 0.445225 8_4:-51712723 None:intergenic
TTGTAATTGGTAATGCATAT+TGG 0.445798 8_4:+51713209 Msa1331950:three_prime_UTR
AGAATGAAGCACCGTTGGTT+GGG 0.451694 8_4:-51711330 None:intergenic
GCACCGGAGTTCTCAGGAGG+GGG 0.455438 8_4:-51712887 None:intergenic
GGTGGAGAAGCACTTGGAGT+TGG 0.455723 8_4:-51711708 None:intergenic
GTAGGAGCTGGAGTAGCCTT+AGG 0.459132 8_4:-51711729 None:intergenic
GTTACTGGACACTGCTCTGC+AGG 0.461094 8_4:+51712689 Msa1331950:CDS
GCAGGTGTAGCGGCCTTGGT+TGG 0.463363 8_4:-51711777 None:intergenic
GCCTCCGGTTCTCCCTCACC+GGG 0.464351 8_4:+51712818 Msa1331950:CDS
GACGCGGCACCGGAGTTCTC+AGG 0.465593 8_4:-51712893 None:intergenic
AACATTAAGGTTCTTTGCCA+TGG 0.467663 8_4:-51711212 None:intergenic
GTGTAGTGTAGTGTTCTTAG+TGG 0.467698 8_4:-51711178 None:intergenic
CCACCTGGAGACTGGGAAGA+AGG 0.472672 8_4:-51712854 None:intergenic
GTAGTAGATGGTGCTGGGGC+AGG 0.476078 8_4:-51711795 None:intergenic
CCGCGTCTCTTGGAGTTGCC+GGG 0.476568 8_4:+51712909 Msa1331950:CDS
GTTGGAACGTATCAAATTGA+AGG 0.478705 8_4:+51710990 Msa1331950:five_prime_UTR
GAAAGACTTGCGAGAAGCCC+AGG 0.480465 8_4:-51711925 None:intergenic
GCTGGAACAGGGGTAGGAGC+TGG 0.482904 8_4:-51711741 None:intergenic
TCATCGCCTTCTCCTTCCAC+AGG 0.484678 8_4:+51712779 Msa1331950:CDS
CCGTCGGTGACACCATTGGC+TGG 0.488830 8_4:+51711868 Msa1331950:CDS
TAAGTAACAGGTCCAGTAGC+AGG 0.490680 8_4:-51711843 None:intergenic
GACAGAACCACCTGGAGACT+GGG 0.492609 8_4:-51712861 None:intergenic
TTCAAAGTTGGAGACATCCT+TGG 0.494707 8_4:+51711945 Msa1331950:CDS
GTTCCAGGACATTGTTCAGC+TGG 0.499514 8_4:+51711633 Msa1331950:CDS
TCCTGTTTCGTTCAATGTCA+CGG 0.504654 8_4:-51711589 None:intergenic
GAGGGAGAACCGGAGGCGGA+AGG 0.504963 8_4:-51712812 None:intergenic
TAGAATGAAGCACCGTTGGT+TGG 0.509679 8_4:-51711331 None:intergenic
CACCTGGAGACTGGGAAGAA+GGG 0.510075 8_4:-51712853 None:intergenic
CTTTCCATCAATGTTGGTAG+TGG 0.510316 8_4:+51712719 Msa1331950:CDS
GGCGATGAGGCGGAAGGAGA+AGG 0.513509 8_4:-51712764 None:intergenic
GTAGCGGCCTTGGTTGGTGC+CGG 0.513837 8_4:-51711771 None:intergenic
GGTAGCTGGACTGTTTGTTA+AGG 0.513870 8_4:-51711568 None:intergenic
GTGCTGCTGCTTATACAACC+TGG 0.514286 8_4:+51711907 Msa1331950:CDS
TGCAAAGGTTATAAAAGCGT+TGG 0.514287 8_4:+51713286 Msa1331950:three_prime_UTR
GTAAGGACAATATGTTTCGT+TGG 0.514686 8_4:-51711066 None:intergenic
CCAGTAGCAGGAGCTGGAGC+AGG 0.514710 8_4:-51711831 None:intergenic
ACAGGTCCAGTAGCAGGAGC+TGG 0.516512 8_4:-51711837 None:intergenic
AGAACTAAGACACGCTCATA+GGG 0.519705 8_4:-51710946 None:intergenic
AGCAGCACCGTTAGATGGAA+TGG 0.523720 8_4:-51711892 None:intergenic
GAAGCAGTAGTAGATGGTGC+TGG 0.524239 8_4:-51711801 None:intergenic
TCCAAGTGCTTCTCCACCTA+AGG 0.524590 8_4:+51711713 Msa1331950:CDS
GGCGGAGTGGCACCTGTGGA+AGG 0.524949 8_4:-51712791 None:intergenic
GTGGCACCTGTGGAAGGAGA+AGG 0.526612 8_4:-51712785 None:intergenic
AAGCAGTAGTAGATGGTGCT+GGG 0.527160 8_4:-51711800 None:intergenic
CAAAAGCTTTCCATCAATGT+TGG 0.527473 8_4:+51712713 Msa1331950:CDS
AACTCCAAGAGACGCGGCAC+CGG 0.528242 8_4:-51712903 None:intergenic
GTGACAGGAGACCCCGGTGA+GGG 0.529596 8_4:-51712830 None:intergenic
GTAGTGTTCTTAGTGGTCTC+GGG 0.532612 8_4:-51711171 None:intergenic
CGGTGAGGGAGAACCGGAGG+CGG 0.533082 8_4:-51712816 None:intergenic
TGCTGCTGCTTATACAACCT+GGG 0.535411 8_4:+51711908 Msa1331950:CDS
GGGTTGCTGAAAGTTGCAAT+TGG 0.537641 8_4:-51712614 None:intergenic
GGTATAGAATGAAGCACCGT+TGG 0.538174 8_4:-51711335 None:intergenic
AAAAGCACCGGCACCAACCA+AGG 0.541334 8_4:+51711764 Msa1331950:CDS
TGGTGCTGGGGCAGGTGTAG+CGG 0.541610 8_4:-51711787 None:intergenic
GCAGGAGCTGGAGCAGGTGT+TGG 0.542881 8_4:-51711825 None:intergenic
GTGCAAGACTTGAGAGTCGT+TGG 0.544315 8_4:-51711026 None:intergenic
TACACCGTCGGTGACACCAT+TGG 0.546097 8_4:+51711864 Msa1331950:CDS
TTAAGTGTTACTCTCACTGG+TGG 0.550431 8_4:-51712635 None:intergenic
GGAGAAGGCGATGAGGCGGA+AGG 0.552275 8_4:-51712770 None:intergenic
GGAGAACCGGAGGCGGAAGG+CGG 0.556109 8_4:-51712809 None:intergenic
ACCTGGAGACTGGGAAGAAG+GGG 0.556112 8_4:-51712852 None:intergenic
GCCTTAGGTGGAGAAGCACT+TGG 0.556300 8_4:-51711714 None:intergenic
GCAGTGTTCAATTATGCAAG+TGG 0.556563 8_4:+51711477 Msa1331950:intron
AAGGAGAAGGTGATGTGGCA+GGG 0.559165 8_4:-51712751 None:intergenic
GTTGGTGAAGCAGTAGTAGA+TGG 0.562949 8_4:-51711807 None:intergenic
TGGACAACATGATGTTGCTA+AGG 0.564994 8_4:+51711497 Msa1331950:CDS
CCCCGGTGAGGGAGAACCGG+AGG 0.568850 8_4:-51712819 None:intergenic
TGCAGCTGCAATTGAGAGGA+CGG 0.569204 8_4:-51712942 None:intergenic
AGATGGAATGGTCCAGCCAA+TGG 0.572806 8_4:-51711880 None:intergenic
GAGATGAGATGCTAATTAGG+AGG 0.573955 8_4:+51712998 Msa1331950:three_prime_UTR
GGCACCGGAGTTCTCAGGAG+GGG 0.576346 8_4:-51712888 None:intergenic
TTGTTTGTGCAAATGATCCA+TGG 0.576582 8_4:-51711273 None:intergenic
GGCTGGACCATTCCATCTAA+CGG 0.581650 8_4:+51711885 Msa1331950:CDS
CCAGCCAATGGTGTCACCGA+CGG 0.581738 8_4:-51711868 None:intergenic
CCCTGTTCCAGCAAAAGCAC+CGG 0.587423 8_4:+51711752 Msa1331950:CDS
CACCGGAGTTCTCAGGAGGG+GGG 0.588751 8_4:-51712886 None:intergenic
GAGAGTCGTTGGCGTTTACA+CGG 0.589723 8_4:-51711015 None:intergenic
GAAGGGGTGACAGGAGACCC+CGG 0.590847 8_4:-51712836 None:intergenic
TGCTTCATTCTATACCAACT+GGG 0.590943 8_4:+51711342 Msa1331950:CDS
ACCGGAGGCGGAAGGCGGAG+TGG 0.594091 8_4:-51712804 None:intergenic
ACAGCTTACGATAGTTGCAA+TGG 0.598738 8_4:+51711528 Msa1331950:CDS
GCGGCACCGGAGTTCTCAGG+AGG 0.599451 8_4:-51712890 None:intergenic
GTTGCTGCAAACCTGTTCCA+TGG 0.601439 8_4:+51711256 Msa1331950:CDS
TAAGTGTTACTCTCACTGGT+GGG 0.601887 8_4:-51712634 None:intergenic
TTCACTGTAGGCGACACTCT+CGG 0.604689 8_4:+51711379 Msa1331950:CDS
AGCTGAACAATGTCCTGGAA+CGG 0.608366 8_4:-51711631 None:intergenic
GGACCTGTTACTTACACCGT+CGG 0.610193 8_4:+51711852 Msa1331950:CDS
GGAGCTGGAGTAGCCTTAGG+TGG 0.618274 8_4:-51711726 None:intergenic
CCTTCTTCCCAGTCTCCAGG+TGG 0.619545 8_4:+51712854 Msa1331950:CDS
GGAAGGCGGAGTGGCACCTG+TGG 0.619926 8_4:-51712795 None:intergenic
CGGCACCGGAGTTCTCAGGA+GGG 0.620355 8_4:-51712889 None:intergenic
AAAATGCAGCTGCAATTGAG+AGG 0.622849 8_4:-51712946 None:intergenic
GGAAGGAGAAGGCGATGAGG+CGG 0.623870 8_4:-51712774 None:intergenic
GAGAGTGTCGCCTACAGTGA+AGG 0.626729 8_4:-51711377 None:intergenic
GGTACTCATTACTATATCTG+TGG 0.633939 8_4:+51712665 Msa1331950:CDS
CCCGGCAACTCCAAGAGACG+CGG 0.637522 8_4:-51712909 None:intergenic
GAGGACGGTGACAAATAACC+CGG 0.639473 8_4:-51712927 None:intergenic
TCCAACAAAACCTTCACTGT+AGG 0.644441 8_4:+51711367 Msa1331950:CDS
CCAATTGAATGCACACAACG+TGG 0.647358 8_4:+51712547 Msa1331950:CDS
ATTTGCACAAACAAGACATG+TGG 0.650443 8_4:+51711282 Msa1331950:CDS
GGTGACAGGAGACCCCGGTG+AGG 0.653268 8_4:-51712831 None:intergenic
ACAGCGGACTATCAGAATCA+CGG 0.656084 8_4:+51713247 Msa1331950:three_prime_UTR
CATGTGGTTGGTGATACCAC+AGG 0.660891 8_4:+51711298 Msa1331950:CDS
CTACACTACACAAACAACCA+TGG 0.662752 8_4:+51711195 Msa1331950:exon
GGCGGAAGGAGAAGGTGATG+TGG 0.668642 8_4:-51712756 None:intergenic
CAACGTGGAAGAAGTGACAA+AGG 0.672668 8_4:+51712562 Msa1331950:CDS
GGTTGGACTATCCCAACCAA+CGG 0.674561 8_4:+51711319 Msa1331950:CDS
AGCAGTAGTAGATGGTGCTG+GGG 0.674917 8_4:-51711799 None:intergenic
TGTGGAAGGAGAAGGCGATG+AGG 0.677050 8_4:-51712777 None:intergenic
GCACAAACAAGACATGTGGT+TGG 0.685878 8_4:+51711286 Msa1331950:CDS
GGTTGGGATAGTCCAACCTG+TGG 0.687809 8_4:-51711314 None:intergenic
TGGTTGGTGATACCACAGGT+TGG 0.725223 8_4:+51711302 Msa1331950:CDS
CCTCCGGTTCTCCCTCACCG+GGG 0.753255 8_4:+51712819 Msa1331950:CDS
GTGTATGATTGATATCACAG+CGG 0.797976 8_4:+51713231 Msa1331950:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCATATTCAAATTAG+TGG - chr8_4:51712244-51712263 None:intergenic 15.0%
!!! AAATAAATAAACACTTTTGT+TGG + chr8_4:51713147-51713166 Msa1331950:three_prime_UTR 15.0%
!!! AATAAATAAACACTTTTGTT+GGG + chr8_4:51713148-51713167 Msa1331950:three_prime_UTR 15.0%
!! ATTAATCATATTCAAATTAG+TGG - chr8_4:51712244-51712263 None:intergenic 15.0%
!!! AAATAAATAAACACTTTTGT+TGG + chr8_4:51713147-51713166 Msa1331950:three_prime_UTR 15.0%
!!! AATAAATAAACACTTTTGTT+GGG + chr8_4:51713148-51713167 Msa1331950:three_prime_UTR 15.0%
!!! ATGAAAGAACTTAATTTGTA+AGG - chr8_4:51711086-51711105 None:intergenic 20.0%
!! TATACCTATTAATCAAGAAT+GGG - chr8_4:51712184-51712203 None:intergenic 20.0%
!! ATATACCTATTAATCAAGAA+TGG - chr8_4:51712185-51712204 None:intergenic 20.0%
!! GATTAACAAAATTCAATACA+TGG + chr8_4:51712300-51712319 Msa1331950:intron 20.0%
!! GTATATATTAATCAAGAGAT+CGG - chr8_4:51712338-51712357 None:intergenic 20.0%
!!! TTTAGATGTATAATTTTGTG+AGG + chr8_4:51712482-51712501 Msa1331950:intron 20.0%
!!! TTTGTTATTGTGTTTTTTTG+AGG + chr8_4:51713063-51713082 Msa1331950:three_prime_UTR 20.0%
!!! ACTATTTCTTGATTGTTATT+TGG + chr8_4:51713181-51713200 Msa1331950:three_prime_UTR 20.0%
!!! CTATTTCTTGATTGTTATTT+GGG + chr8_4:51713182-51713201 Msa1331950:three_prime_UTR 20.0%
!!! AAACTGTTATATTTTTGCAA+AGG + chr8_4:51713271-51713290 Msa1331950:three_prime_UTR 20.0%
!!! ATGAAAGAACTTAATTTGTA+AGG - chr8_4:51711086-51711105 None:intergenic 20.0%
!! TATACCTATTAATCAAGAAT+GGG - chr8_4:51712184-51712203 None:intergenic 20.0%
!! ATATACCTATTAATCAAGAA+TGG - chr8_4:51712185-51712204 None:intergenic 20.0%
!! GATTAACAAAATTCAATACA+TGG + chr8_4:51712300-51712319 Msa1331950:intron 20.0%
!! GTATATATTAATCAAGAGAT+CGG - chr8_4:51712338-51712357 None:intergenic 20.0%
!!! TTTAGATGTATAATTTTGTG+AGG + chr8_4:51712482-51712501 Msa1331950:intron 20.0%
!!! TTTGTTATTGTGTTTTTTTG+AGG + chr8_4:51713063-51713082 Msa1331950:three_prime_UTR 20.0%
!!! ACTATTTCTTGATTGTTATT+TGG + chr8_4:51713181-51713200 Msa1331950:three_prime_UTR 20.0%
!!! CTATTTCTTGATTGTTATTT+GGG + chr8_4:51713182-51713201 Msa1331950:three_prime_UTR 20.0%
!!! AAACTGTTATATTTTTGCAA+AGG + chr8_4:51713271-51713290 Msa1331950:three_prime_UTR 20.0%
! ATGTTTCGTTGGTATTTATA+GGG - chr8_4:51711058-51711077 None:intergenic 25.0%
! TATGTTTCGTTGGTATTTAT+AGG - chr8_4:51711059-51711078 None:intergenic 25.0%
! AAGCATATTCCTATAAAAAC+AGG + chr8_4:51711143-51711162 Msa1331950:five_prime_UTR 25.0%
! AGCATATTCCTATAAAAACA+GGG + chr8_4:51711144-51711163 Msa1331950:five_prime_UTR 25.0%
! GAACAAAAACAAGAACATTA+AGG - chr8_4:51711228-51711247 None:intergenic 25.0%
! TAAACGAATCAAAATGACAA+GGG - chr8_4:51711425-51711444 None:intergenic 25.0%
! ATAAACGAATCAAAATGACA+AGG - chr8_4:51711426-51711445 None:intergenic 25.0%
! ATACCTATTAATCAAGAATG+GGG - chr8_4:51712183-51712202 None:intergenic 25.0%
!! TTAGGTATCTAAAATTGTTG+TGG + chr8_4:51712414-51712433 Msa1331950:intron 25.0%
! TGATTTATTTGTGTGATTCT+TGG + chr8_4:51713033-51713052 Msa1331950:three_prime_UTR 25.0%
!! TTATTTGGGATAGTTGTAAT+TGG + chr8_4:51713196-51713215 Msa1331950:three_prime_UTR 25.0%
!!! TTGTAATTGGTAATGCATAT+TGG + chr8_4:51713209-51713228 Msa1331950:three_prime_UTR 25.0%
! ATGTTTCGTTGGTATTTATA+GGG - chr8_4:51711058-51711077 None:intergenic 25.0%
! TATGTTTCGTTGGTATTTAT+AGG - chr8_4:51711059-51711078 None:intergenic 25.0%
! AAGCATATTCCTATAAAAAC+AGG + chr8_4:51711143-51711162 Msa1331950:five_prime_UTR 25.0%
! AGCATATTCCTATAAAAACA+GGG + chr8_4:51711144-51711163 Msa1331950:five_prime_UTR 25.0%
! GAACAAAAACAAGAACATTA+AGG - chr8_4:51711228-51711247 None:intergenic 25.0%
! TAAACGAATCAAAATGACAA+GGG - chr8_4:51711425-51711444 None:intergenic 25.0%
! ATAAACGAATCAAAATGACA+AGG - chr8_4:51711426-51711445 None:intergenic 25.0%
! ATACCTATTAATCAAGAATG+GGG - chr8_4:51712183-51712202 None:intergenic 25.0%
!! TTAGGTATCTAAAATTGTTG+TGG + chr8_4:51712414-51712433 Msa1331950:intron 25.0%
! TGATTTATTTGTGTGATTCT+TGG + chr8_4:51713033-51713052 Msa1331950:three_prime_UTR 25.0%
!! TTATTTGGGATAGTTGTAAT+TGG + chr8_4:51713196-51713215 Msa1331950:three_prime_UTR 25.0%
!!! TTGTAATTGGTAATGCATAT+TGG + chr8_4:51713209-51713228 Msa1331950:three_prime_UTR 25.0%
!!! AGCTTTTTTGTCCATAATGT+TGG + chr8_4:51710972-51710991 Msa1331950:five_prime_UTR 30.0%
TTTGATACGTTCCAACATTA+TGG - chr8_4:51710986-51711005 None:intergenic 30.0%
GTTGGTATTTATAGGGAAAA+AGG - chr8_4:51711051-51711070 None:intergenic 30.0%
GCATATTCCTATAAAAACAG+GGG + chr8_4:51711145-51711164 Msa1331950:five_prime_UTR 30.0%
CAGTGTTAGATTTGATTAAC+CGG + chr8_4:51712061-51712080 Msa1331950:intron 30.0%
AGTGTTAGATTTGATTAACC+GGG + chr8_4:51712062-51712081 Msa1331950:intron 30.0%
TTAACCAGGTTGTTGAATTT+AGG + chr8_4:51712396-51712415 Msa1331950:intron 30.0%
AGAGTAACACTTAACAAAAC+TGG + chr8_4:51712644-51712663 Msa1331950:CDS 30.0%
!!! AGCTTTTTTGTCCATAATGT+TGG + chr8_4:51710972-51710991 Msa1331950:five_prime_UTR 30.0%
TTTGATACGTTCCAACATTA+TGG - chr8_4:51710986-51711005 None:intergenic 30.0%
GTTGGTATTTATAGGGAAAA+AGG - chr8_4:51711051-51711070 None:intergenic 30.0%
GCATATTCCTATAAAAACAG+GGG + chr8_4:51711145-51711164 Msa1331950:five_prime_UTR 30.0%
CAGTGTTAGATTTGATTAAC+CGG + chr8_4:51712061-51712080 Msa1331950:intron 30.0%
AGTGTTAGATTTGATTAACC+GGG + chr8_4:51712062-51712081 Msa1331950:intron 30.0%
TTAACCAGGTTGTTGAATTT+AGG + chr8_4:51712396-51712415 Msa1331950:intron 30.0%
AGAGTAACACTTAACAAAAC+TGG + chr8_4:51712644-51712663 Msa1331950:CDS 30.0%
GTTGGAACGTATCAAATTGA+AGG + chr8_4:51710990-51711009 Msa1331950:five_prime_UTR 35.0%
GTAAGGACAATATGTTTCGT+TGG - chr8_4:51711069-51711088 None:intergenic 35.0%
GAATATGCTTTGCGTTTGTT+TGG - chr8_4:51711133-51711152 None:intergenic 35.0%
AACATTAAGGTTCTTTGCCA+TGG - chr8_4:51711215-51711234 None:intergenic 35.0%
TTGTTTGTGCAAATGATCCA+TGG - chr8_4:51711276-51711295 None:intergenic 35.0%
ATTTGCACAAACAAGACATG+TGG + chr8_4:51711282-51711301 Msa1331950:CDS 35.0%
TGCTTCATTCTATACCAACT+GGG + chr8_4:51711342-51711361 Msa1331950:CDS 35.0%
TCAATAACCATGACTTACCA+AGG - chr8_4:51711965-51711984 None:intergenic 35.0%
AGATTTGATTAACCGGGAAA+TGG + chr8_4:51712068-51712087 Msa1331950:intron 35.0%
ATAGATTACACATTACCCTC+TGG + chr8_4:51712131-51712150 Msa1331950:intron 35.0%
GATACCTAAATTCAACAACC+TGG - chr8_4:51712403-51712422 None:intergenic 35.0%
! TTGTTAAGTGTTACTCTCAC+TGG - chr8_4:51712641-51712660 None:intergenic 35.0%
GGTACTCATTACTATATCTG+TGG + chr8_4:51712665-51712684 Msa1331950:CDS 35.0%
!! TACTATATCTGTGGTGTTAC+TGG + chr8_4:51712674-51712693 Msa1331950:CDS 35.0%
! CAACATTGATGGAAAGCTTT+TGG - chr8_4:51712715-51712734 None:intergenic 35.0%
CAAAAGCTTTCCATCAATGT+TGG + chr8_4:51712713-51712732 Msa1331950:CDS 35.0%
GATGAGATGAGATGCTAATT+AGG + chr8_4:51712995-51713014 Msa1331950:three_prime_UTR 35.0%
! CTGTTCATCTACTACAGTTT+TGG + chr8_4:51713110-51713129 Msa1331950:three_prime_UTR 35.0%
GTGTATGATTGATATCACAG+CGG + chr8_4:51713231-51713250 Msa1331950:three_prime_UTR 35.0%
! TGCAAAGGTTATAAAAGCGT+TGG + chr8_4:51713286-51713305 Msa1331950:three_prime_UTR 35.0%
GTTGGAACGTATCAAATTGA+AGG + chr8_4:51710990-51711009 Msa1331950:five_prime_UTR 35.0%
GTAAGGACAATATGTTTCGT+TGG - chr8_4:51711069-51711088 None:intergenic 35.0%
GAATATGCTTTGCGTTTGTT+TGG - chr8_4:51711133-51711152 None:intergenic 35.0%
AACATTAAGGTTCTTTGCCA+TGG - chr8_4:51711215-51711234 None:intergenic 35.0%
TTGTTTGTGCAAATGATCCA+TGG - chr8_4:51711276-51711295 None:intergenic 35.0%
ATTTGCACAAACAAGACATG+TGG + chr8_4:51711282-51711301 Msa1331950:CDS 35.0%
TGCTTCATTCTATACCAACT+GGG + chr8_4:51711342-51711361 Msa1331950:CDS 35.0%
TCAATAACCATGACTTACCA+AGG - chr8_4:51711965-51711984 None:intergenic 35.0%
AGATTTGATTAACCGGGAAA+TGG + chr8_4:51712068-51712087 Msa1331950:intron 35.0%
ATAGATTACACATTACCCTC+TGG + chr8_4:51712131-51712150 Msa1331950:intron 35.0%
GATACCTAAATTCAACAACC+TGG - chr8_4:51712403-51712422 None:intergenic 35.0%
! TTGTTAAGTGTTACTCTCAC+TGG - chr8_4:51712641-51712660 None:intergenic 35.0%
GGTACTCATTACTATATCTG+TGG + chr8_4:51712665-51712684 Msa1331950:CDS 35.0%
!! TACTATATCTGTGGTGTTAC+TGG + chr8_4:51712674-51712693 Msa1331950:CDS 35.0%
! CAACATTGATGGAAAGCTTT+TGG - chr8_4:51712715-51712734 None:intergenic 35.0%
CAAAAGCTTTCCATCAATGT+TGG + chr8_4:51712713-51712732 Msa1331950:CDS 35.0%
GATGAGATGAGATGCTAATT+AGG + chr8_4:51712995-51713014 Msa1331950:three_prime_UTR 35.0%
! CTGTTCATCTACTACAGTTT+TGG + chr8_4:51713110-51713129 Msa1331950:three_prime_UTR 35.0%
GTGTATGATTGATATCACAG+CGG + chr8_4:51713231-51713250 Msa1331950:three_prime_UTR 35.0%
! TGCAAAGGTTATAAAAGCGT+TGG + chr8_4:51713286-51713305 Msa1331950:three_prime_UTR 35.0%
AGAACTAAGACACGCTCATA+GGG - chr8_4:51710949-51710968 None:intergenic 40.0%
AAGAACTAAGACACGCTCAT+AGG - chr8_4:51710950-51710969 None:intergenic 40.0%
TGTAGTGTTCTTAGTGGTCT+CGG - chr8_4:51711175-51711194 None:intergenic 40.0%
GTGTAGTGTAGTGTTCTTAG+TGG - chr8_4:51711181-51711200 None:intergenic 40.0%
CTACACTACACAAACAACCA+TGG + chr8_4:51711195-51711214 Msa1331950:exon 40.0%
GTGCTTCATTCTATACCAAC+TGG + chr8_4:51711341-51711360 Msa1331950:CDS 40.0%
TCCAACAAAACCTTCACTGT+AGG + chr8_4:51711367-51711386 Msa1331950:CDS 40.0%
GCAGTGTTCAATTATGCAAG+TGG + chr8_4:51711477-51711496 Msa1331950:intron 40.0%
TGGACAACATGATGTTGCTA+AGG + chr8_4:51711497-51711516 Msa1331950:CDS 40.0%
ACAGCTTACGATAGTTGCAA+TGG + chr8_4:51711528-51711547 Msa1331950:CDS 40.0%
TCCTGTTTCGTTCAATGTCA+CGG - chr8_4:51711592-51711611 None:intergenic 40.0%
TCTCGCAAGTCTTTCAAAGT+TGG + chr8_4:51711933-51711952 Msa1331950:CDS 40.0%
TTCAAAGTTGGAGACATCCT+TGG + chr8_4:51711945-51711964 Msa1331950:CDS 40.0%
! TACGGTGATTTTCACACAAG+AGG + chr8_4:51712098-51712117 Msa1331950:intron 40.0%
TGAAAGTCACAACACATGAG+AGG + chr8_4:51712156-51712175 Msa1331950:intron 40.0%
GGACCCCATTCTTGATTAAT+AGG + chr8_4:51712177-51712196 Msa1331950:intron 40.0%
GTGTGTGAAATGCATTAACC+AGG + chr8_4:51712382-51712401 Msa1331950:intron 40.0%
! TAAGTGTTACTCTCACTGGT+GGG - chr8_4:51712637-51712656 None:intergenic 40.0%
! TTAAGTGTTACTCTCACTGG+TGG - chr8_4:51712638-51712657 None:intergenic 40.0%
! CTTTCCATCAATGTTGGTAG+TGG + chr8_4:51712719-51712738 Msa1331950:CDS 40.0%
AAAATGCAGCTGCAATTGAG+AGG - chr8_4:51712949-51712968 None:intergenic 40.0%
GAGATGAGATGCTAATTAGG+AGG + chr8_4:51712998-51713017 Msa1331950:three_prime_UTR 40.0%
AGAACTAAGACACGCTCATA+GGG - chr8_4:51710949-51710968 None:intergenic 40.0%
AAGAACTAAGACACGCTCAT+AGG - chr8_4:51710950-51710969 None:intergenic 40.0%
TGTAGTGTTCTTAGTGGTCT+CGG - chr8_4:51711175-51711194 None:intergenic 40.0%
GTGTAGTGTAGTGTTCTTAG+TGG - chr8_4:51711181-51711200 None:intergenic 40.0%
CTACACTACACAAACAACCA+TGG + chr8_4:51711195-51711214 Msa1331950:exon 40.0%
GTGCTTCATTCTATACCAAC+TGG + chr8_4:51711341-51711360 Msa1331950:CDS 40.0%
TCCAACAAAACCTTCACTGT+AGG + chr8_4:51711367-51711386 Msa1331950:CDS 40.0%
GCAGTGTTCAATTATGCAAG+TGG + chr8_4:51711477-51711496 Msa1331950:intron 40.0%
TGGACAACATGATGTTGCTA+AGG + chr8_4:51711497-51711516 Msa1331950:CDS 40.0%
ACAGCTTACGATAGTTGCAA+TGG + chr8_4:51711528-51711547 Msa1331950:CDS 40.0%
TCCTGTTTCGTTCAATGTCA+CGG - chr8_4:51711592-51711611 None:intergenic 40.0%
TCTCGCAAGTCTTTCAAAGT+TGG + chr8_4:51711933-51711952 Msa1331950:CDS 40.0%
TTCAAAGTTGGAGACATCCT+TGG + chr8_4:51711945-51711964 Msa1331950:CDS 40.0%
! TACGGTGATTTTCACACAAG+AGG + chr8_4:51712098-51712117 Msa1331950:intron 40.0%
TGAAAGTCACAACACATGAG+AGG + chr8_4:51712156-51712175 Msa1331950:intron 40.0%
GGACCCCATTCTTGATTAAT+AGG + chr8_4:51712177-51712196 Msa1331950:intron 40.0%
GTGTGTGAAATGCATTAACC+AGG + chr8_4:51712382-51712401 Msa1331950:intron 40.0%
! TAAGTGTTACTCTCACTGGT+GGG - chr8_4:51712637-51712656 None:intergenic 40.0%
! TTAAGTGTTACTCTCACTGG+TGG - chr8_4:51712638-51712657 None:intergenic 40.0%
! CTTTCCATCAATGTTGGTAG+TGG + chr8_4:51712719-51712738 Msa1331950:CDS 40.0%
AAAATGCAGCTGCAATTGAG+AGG - chr8_4:51712949-51712968 None:intergenic 40.0%
GAGATGAGATGCTAATTAGG+AGG + chr8_4:51712998-51713017 Msa1331950:three_prime_UTR 40.0%
GTAGTGTTCTTAGTGGTCTC+GGG - chr8_4:51711174-51711193 None:intergenic 45.0%
GTGCAAATGATCCATGGAAC+AGG - chr8_4:51711270-51711289 None:intergenic 45.0%
GCACAAACAAGACATGTGGT+TGG + chr8_4:51711286-51711305 Msa1331950:CDS 45.0%
!! AGAATGAAGCACCGTTGGTT+GGG - chr8_4:51711333-51711352 None:intergenic 45.0%
!! TAGAATGAAGCACCGTTGGT+TGG - chr8_4:51711334-51711353 None:intergenic 45.0%
!! GGTATAGAATGAAGCACCGT+TGG - chr8_4:51711338-51711357 None:intergenic 45.0%
!! GCCTACAGTGAAGGTTTTGT+TGG - chr8_4:51711371-51711390 None:intergenic 45.0%
! GGTAGCTGGACTGTTTGTTA+AGG - chr8_4:51711571-51711590 None:intergenic 45.0%
ACCGTGACATTGAACGAAAC+AGG + chr8_4:51711588-51711607 Msa1331950:CDS 45.0%
! AACTTCATTTGTGCCGTTCC+AGG + chr8_4:51711618-51711637 Msa1331950:CDS 45.0%
AGCTGAACAATGTCCTGGAA+CGG - chr8_4:51711634-51711653 None:intergenic 45.0%
AAGCAGTAGTAGATGGTGCT+GGG - chr8_4:51711803-51711822 None:intergenic 45.0%
! GTTGGTGAAGCAGTAGTAGA+TGG - chr8_4:51711810-51711829 None:intergenic 45.0%
TAAGTAACAGGTCCAGTAGC+AGG - chr8_4:51711846-51711865 None:intergenic 45.0%
! TGCTGCTGCTTATACAACCT+GGG + chr8_4:51711908-51711927 Msa1331950:CDS 45.0%
GAGACATCCTTGGTAAGTCA+TGG + chr8_4:51711955-51711974 Msa1331950:intron 45.0%
CCGTATGATGATCCATTTCC+CGG - chr8_4:51712083-51712102 None:intergenic 45.0%
CCGGGAAATGGATCATCATA+CGG + chr8_4:51712080-51712099 Msa1331950:intron 45.0%
GTTGTGACTTTCACACCAGA+GGG - chr8_4:51712149-51712168 None:intergenic 45.0%
TGTTGTGACTTTCACACCAG+AGG - chr8_4:51712150-51712169 None:intergenic 45.0%
CCACGTTGTGTGCATTCAAT+TGG - chr8_4:51712550-51712569 None:intergenic 45.0%
CCAATTGAATGCACACAACG+TGG + chr8_4:51712547-51712566 Msa1331950:CDS 45.0%
CAACGTGGAAGAAGTGACAA+AGG + chr8_4:51712562-51712581 Msa1331950:CDS 45.0%
GGGTTGCTGAAAGTTGCAAT+TGG - chr8_4:51712617-51712636 None:intergenic 45.0%
GCTACCACTACCAACATTGA+TGG - chr8_4:51712726-51712745 None:intergenic 45.0%
!! ACAGCGGACTATCAGAATCA+CGG + chr8_4:51713247-51713266 Msa1331950:three_prime_UTR 45.0%
GTAGTGTTCTTAGTGGTCTC+GGG - chr8_4:51711174-51711193 None:intergenic 45.0%
GTGCAAATGATCCATGGAAC+AGG - chr8_4:51711270-51711289 None:intergenic 45.0%
GCACAAACAAGACATGTGGT+TGG + chr8_4:51711286-51711305 Msa1331950:CDS 45.0%
!! AGAATGAAGCACCGTTGGTT+GGG - chr8_4:51711333-51711352 None:intergenic 45.0%
!! TAGAATGAAGCACCGTTGGT+TGG - chr8_4:51711334-51711353 None:intergenic 45.0%
!! GGTATAGAATGAAGCACCGT+TGG - chr8_4:51711338-51711357 None:intergenic 45.0%
!! GCCTACAGTGAAGGTTTTGT+TGG - chr8_4:51711371-51711390 None:intergenic 45.0%
! GGTAGCTGGACTGTTTGTTA+AGG - chr8_4:51711571-51711590 None:intergenic 45.0%
ACCGTGACATTGAACGAAAC+AGG + chr8_4:51711588-51711607 Msa1331950:CDS 45.0%
! AACTTCATTTGTGCCGTTCC+AGG + chr8_4:51711618-51711637 Msa1331950:CDS 45.0%
AGCTGAACAATGTCCTGGAA+CGG - chr8_4:51711634-51711653 None:intergenic 45.0%
AAGCAGTAGTAGATGGTGCT+GGG - chr8_4:51711803-51711822 None:intergenic 45.0%
! GTTGGTGAAGCAGTAGTAGA+TGG - chr8_4:51711810-51711829 None:intergenic 45.0%
TAAGTAACAGGTCCAGTAGC+AGG - chr8_4:51711846-51711865 None:intergenic 45.0%
! TGCTGCTGCTTATACAACCT+GGG + chr8_4:51711908-51711927 Msa1331950:CDS 45.0%
GAGACATCCTTGGTAAGTCA+TGG + chr8_4:51711955-51711974 Msa1331950:intron 45.0%
CCGTATGATGATCCATTTCC+CGG - chr8_4:51712083-51712102 None:intergenic 45.0%
CCGGGAAATGGATCATCATA+CGG + chr8_4:51712080-51712099 Msa1331950:intron 45.0%
GTTGTGACTTTCACACCAGA+GGG - chr8_4:51712149-51712168 None:intergenic 45.0%
TGTTGTGACTTTCACACCAG+AGG - chr8_4:51712150-51712169 None:intergenic 45.0%
CCACGTTGTGTGCATTCAAT+TGG - chr8_4:51712550-51712569 None:intergenic 45.0%
CCAATTGAATGCACACAACG+TGG + chr8_4:51712547-51712566 Msa1331950:CDS 45.0%
CAACGTGGAAGAAGTGACAA+AGG + chr8_4:51712562-51712581 Msa1331950:CDS 45.0%
GGGTTGCTGAAAGTTGCAAT+TGG - chr8_4:51712617-51712636 None:intergenic 45.0%
GCTACCACTACCAACATTGA+TGG - chr8_4:51712726-51712745 None:intergenic 45.0%
!! ACAGCGGACTATCAGAATCA+CGG + chr8_4:51713247-51713266 Msa1331950:three_prime_UTR 45.0%
GAGAGTCGTTGGCGTTTACA+CGG - chr8_4:51711018-51711037 None:intergenic 50.0%
GTGCAAGACTTGAGAGTCGT+TGG - chr8_4:51711029-51711048 None:intergenic 50.0%
GTTGCTGCAAACCTGTTCCA+TGG + chr8_4:51711256-51711275 Msa1331950:CDS 50.0%
!! CATGTGGTTGGTGATACCAC+AGG + chr8_4:51711298-51711317 Msa1331950:CDS 50.0%
!! TGGTTGGTGATACCACAGGT+TGG + chr8_4:51711302-51711321 Msa1331950:CDS 50.0%
GGTTGGACTATCCCAACCAA+CGG + chr8_4:51711319-51711338 Msa1331950:CDS 50.0%
!!! GGTTTTGTTGGAAGCCCAGT+TGG - chr8_4:51711359-51711378 None:intergenic 50.0%
TTCACTGTAGGCGACACTCT+CGG + chr8_4:51711379-51711398 Msa1331950:CDS 50.0%
TCGTTCAATGTCACGGTAGC+TGG - chr8_4:51711585-51711604 None:intergenic 50.0%
GTTCCAGGACATTGTTCAGC+TGG + chr8_4:51711633-51711652 Msa1331950:CDS 50.0%
TGTCCAGCTGAACAATGTCC+TGG - chr8_4:51711639-51711658 None:intergenic 50.0%
CTTGGAGTTGGAGCAGAAAC+AGG - chr8_4:51711699-51711718 None:intergenic 50.0%
TCCAAGTGCTTCTCCACCTA+AGG + chr8_4:51711713-51711732 Msa1331950:CDS 50.0%
! AGCAGTAGTAGATGGTGCTG+GGG - chr8_4:51711802-51711821 None:intergenic 50.0%
GAAGCAGTAGTAGATGGTGC+TGG - chr8_4:51711804-51711823 None:intergenic 50.0%
! GGACCTGTTACTTACACCGT+CGG + chr8_4:51711852-51711871 Msa1331950:CDS 50.0%
TCACCGACGGTGTAAGTAAC+AGG - chr8_4:51711858-51711877 None:intergenic 50.0%
AGATGGAATGGTCCAGCCAA+TGG - chr8_4:51711883-51711902 None:intergenic 50.0%
GGCTGGACCATTCCATCTAA+CGG + chr8_4:51711885-51711904 Msa1331950:CDS 50.0%
AGCAGCACCGTTAGATGGAA+TGG - chr8_4:51711895-51711914 None:intergenic 50.0%
TAAGCAGCAGCACCGTTAGA+TGG - chr8_4:51711900-51711919 None:intergenic 50.0%
! GTGCTGCTGCTTATACAACC+TGG + chr8_4:51711907-51711926 Msa1331950:CDS 50.0%
AAGGAGAAGGTGATGTGGCA+GGG - chr8_4:51712754-51712773 None:intergenic 50.0%
GAGGACGGTGACAAATAACC+CGG - chr8_4:51712930-51712949 None:intergenic 50.0%
TGCAGCTGCAATTGAGAGGA+CGG - chr8_4:51712945-51712964 None:intergenic 50.0%
GAGAGTCGTTGGCGTTTACA+CGG - chr8_4:51711018-51711037 None:intergenic 50.0%
GTGCAAGACTTGAGAGTCGT+TGG - chr8_4:51711029-51711048 None:intergenic 50.0%
GTTGCTGCAAACCTGTTCCA+TGG + chr8_4:51711256-51711275 Msa1331950:CDS 50.0%
!! CATGTGGTTGGTGATACCAC+AGG + chr8_4:51711298-51711317 Msa1331950:CDS 50.0%
!! TGGTTGGTGATACCACAGGT+TGG + chr8_4:51711302-51711321 Msa1331950:CDS 50.0%
GGTTGGACTATCCCAACCAA+CGG + chr8_4:51711319-51711338 Msa1331950:CDS 50.0%
!!! GGTTTTGTTGGAAGCCCAGT+TGG - chr8_4:51711359-51711378 None:intergenic 50.0%
TTCACTGTAGGCGACACTCT+CGG + chr8_4:51711379-51711398 Msa1331950:CDS 50.0%
TCGTTCAATGTCACGGTAGC+TGG - chr8_4:51711585-51711604 None:intergenic 50.0%
GTTCCAGGACATTGTTCAGC+TGG + chr8_4:51711633-51711652 Msa1331950:CDS 50.0%
TGTCCAGCTGAACAATGTCC+TGG - chr8_4:51711639-51711658 None:intergenic 50.0%
CTTGGAGTTGGAGCAGAAAC+AGG - chr8_4:51711699-51711718 None:intergenic 50.0%
TCCAAGTGCTTCTCCACCTA+AGG + chr8_4:51711713-51711732 Msa1331950:CDS 50.0%
! AGCAGTAGTAGATGGTGCTG+GGG - chr8_4:51711802-51711821 None:intergenic 50.0%
GAAGCAGTAGTAGATGGTGC+TGG - chr8_4:51711804-51711823 None:intergenic 50.0%
! GGACCTGTTACTTACACCGT+CGG + chr8_4:51711852-51711871 Msa1331950:CDS 50.0%
TCACCGACGGTGTAAGTAAC+AGG - chr8_4:51711858-51711877 None:intergenic 50.0%
AGATGGAATGGTCCAGCCAA+TGG - chr8_4:51711883-51711902 None:intergenic 50.0%
GGCTGGACCATTCCATCTAA+CGG + chr8_4:51711885-51711904 Msa1331950:CDS 50.0%
AGCAGCACCGTTAGATGGAA+TGG - chr8_4:51711895-51711914 None:intergenic 50.0%
TAAGCAGCAGCACCGTTAGA+TGG - chr8_4:51711900-51711919 None:intergenic 50.0%
! GTGCTGCTGCTTATACAACC+TGG + chr8_4:51711907-51711926 Msa1331950:CDS 50.0%
AAGGAGAAGGTGATGTGGCA+GGG - chr8_4:51712754-51712773 None:intergenic 50.0%
GAGGACGGTGACAAATAACC+CGG - chr8_4:51712930-51712949 None:intergenic 50.0%
TGCAGCTGCAATTGAGAGGA+CGG - chr8_4:51712945-51712964 None:intergenic 50.0%
!!! CGGGTCGCCCCTGTTTTTAT+AGG - chr8_4:51711155-51711174 None:intergenic 55.0%
GGTTGGGATAGTCCAACCTG+TGG - chr8_4:51711317-51711336 None:intergenic 55.0%
!! GAGAGTGTCGCCTACAGTGA+AGG - chr8_4:51711380-51711399 None:intergenic 55.0%
!! GGTGGAGAAGCACTTGGAGT+TGG - chr8_4:51711711-51711730 None:intergenic 55.0%
!! GCCTTAGGTGGAGAAGCACT+TGG - chr8_4:51711717-51711736 None:intergenic 55.0%
GTAGGAGCTGGAGTAGCCTT+AGG - chr8_4:51711732-51711751 None:intergenic 55.0%
! GCTTTTGCTGGAACAGGGGT+AGG - chr8_4:51711750-51711769 None:intergenic 55.0%
! CGGTGCTTTTGCTGGAACAG+GGG - chr8_4:51711754-51711773 None:intergenic 55.0%
! CCGGTGCTTTTGCTGGAACA+GGG - chr8_4:51711755-51711774 None:intergenic 55.0%
! CCCTGTTCCAGCAAAAGCAC+CGG + chr8_4:51711752-51711771 Msa1331950:CDS 55.0%
!! AAAAGCACCGGCACCAACCA+AGG + chr8_4:51711764-51711783 Msa1331950:CDS 55.0%
TACACCGTCGGTGACACCAT+TGG + chr8_4:51711864-51711883 Msa1331950:CDS 55.0%
GAAAGACTTGCGAGAAGCCC+AGG - chr8_4:51711928-51711947 None:intergenic 55.0%
GTTACTGGACACTGCTCTGC+AGG + chr8_4:51712689-51712708 Msa1331950:CDS 55.0%
GAAGGAGAAGGTGATGTGGC+AGG - chr8_4:51712755-51712774 None:intergenic 55.0%
TGTGGAAGGAGAAGGCGATG+AGG - chr8_4:51712780-51712799 None:intergenic 55.0%
TCATCGCCTTCTCCTTCCAC+AGG + chr8_4:51712779-51712798 Msa1331950:CDS 55.0%
ACCTGGAGACTGGGAAGAAG+GGG - chr8_4:51712855-51712874 None:intergenic 55.0%
CACCTGGAGACTGGGAAGAA+GGG - chr8_4:51712856-51712875 None:intergenic 55.0%
GACAGAACCACCTGGAGACT+GGG - chr8_4:51712864-51712883 None:intergenic 55.0%
TGACAGAACCACCTGGAGAC+TGG - chr8_4:51712865-51712884 None:intergenic 55.0%
!!! CGGGTCGCCCCTGTTTTTAT+AGG - chr8_4:51711155-51711174 None:intergenic 55.0%
GGTTGGGATAGTCCAACCTG+TGG - chr8_4:51711317-51711336 None:intergenic 55.0%
!! GAGAGTGTCGCCTACAGTGA+AGG - chr8_4:51711380-51711399 None:intergenic 55.0%
!! GGTGGAGAAGCACTTGGAGT+TGG - chr8_4:51711711-51711730 None:intergenic 55.0%
!! GCCTTAGGTGGAGAAGCACT+TGG - chr8_4:51711717-51711736 None:intergenic 55.0%
GTAGGAGCTGGAGTAGCCTT+AGG - chr8_4:51711732-51711751 None:intergenic 55.0%
! GCTTTTGCTGGAACAGGGGT+AGG - chr8_4:51711750-51711769 None:intergenic 55.0%
! CGGTGCTTTTGCTGGAACAG+GGG - chr8_4:51711754-51711773 None:intergenic 55.0%
! CCGGTGCTTTTGCTGGAACA+GGG - chr8_4:51711755-51711774 None:intergenic 55.0%
! CCCTGTTCCAGCAAAAGCAC+CGG + chr8_4:51711752-51711771 Msa1331950:CDS 55.0%
!! AAAAGCACCGGCACCAACCA+AGG + chr8_4:51711764-51711783 Msa1331950:CDS 55.0%
TACACCGTCGGTGACACCAT+TGG + chr8_4:51711864-51711883 Msa1331950:CDS 55.0%
GAAAGACTTGCGAGAAGCCC+AGG - chr8_4:51711928-51711947 None:intergenic 55.0%
GTTACTGGACACTGCTCTGC+AGG + chr8_4:51712689-51712708 Msa1331950:CDS 55.0%
GAAGGAGAAGGTGATGTGGC+AGG - chr8_4:51712755-51712774 None:intergenic 55.0%
TGTGGAAGGAGAAGGCGATG+AGG - chr8_4:51712780-51712799 None:intergenic 55.0%
TCATCGCCTTCTCCTTCCAC+AGG + chr8_4:51712779-51712798 Msa1331950:CDS 55.0%
ACCTGGAGACTGGGAAGAAG+GGG - chr8_4:51712855-51712874 None:intergenic 55.0%
CACCTGGAGACTGGGAAGAA+GGG - chr8_4:51712856-51712875 None:intergenic 55.0%
GACAGAACCACCTGGAGACT+GGG - chr8_4:51712864-51712883 None:intergenic 55.0%
TGACAGAACCACCTGGAGAC+TGG - chr8_4:51712865-51712884 None:intergenic 55.0%
! GGAGCTGGAGTAGCCTTAGG+TGG - chr8_4:51711729-51711748 None:intergenic 60.0%
! GCCGGTGCTTTTGCTGGAAC+AGG - chr8_4:51711756-51711775 None:intergenic 60.0%
!!! GTTGGTGCCGGTGCTTTTGC+TGG - chr8_4:51711762-51711781 None:intergenic 60.0%
! GTAGTAGATGGTGCTGGGGC+AGG - chr8_4:51711798-51711817 None:intergenic 60.0%
ACAGGTCCAGTAGCAGGAGC+TGG - chr8_4:51711840-51711859 None:intergenic 60.0%
!! CCAGCCAATGGTGTCACCGA+CGG - chr8_4:51711871-51711890 None:intergenic 60.0%
GGCGGAAGGAGAAGGTGATG+TGG - chr8_4:51712759-51712778 None:intergenic 60.0%
GGAAGGAGAAGGCGATGAGG+CGG - chr8_4:51712777-51712796 None:intergenic 60.0%
GTGGCACCTGTGGAAGGAGA+AGG - chr8_4:51712788-51712807 None:intergenic 60.0%
GACTGGGAAGAAGGGGTGAC+AGG - chr8_4:51712848-51712867 None:intergenic 60.0%
ACCCCTTCTTCCCAGTCTCC+AGG + chr8_4:51712851-51712870 Msa1331950:CDS 60.0%
CCACCTGGAGACTGGGAAGA+AGG - chr8_4:51712857-51712876 None:intergenic 60.0%
CCTTCTTCCCAGTCTCCAGG+TGG + chr8_4:51712854-51712873 Msa1331950:CDS 60.0%
AACTCCAAGAGACGCGGCAC+CGG - chr8_4:51712906-51712925 None:intergenic 60.0%
! GGAGCTGGAGTAGCCTTAGG+TGG - chr8_4:51711729-51711748 None:intergenic 60.0%
! GCCGGTGCTTTTGCTGGAAC+AGG - chr8_4:51711756-51711775 None:intergenic 60.0%
!!! GTTGGTGCCGGTGCTTTTGC+TGG - chr8_4:51711762-51711781 None:intergenic 60.0%
! GTAGTAGATGGTGCTGGGGC+AGG - chr8_4:51711798-51711817 None:intergenic 60.0%
ACAGGTCCAGTAGCAGGAGC+TGG - chr8_4:51711840-51711859 None:intergenic 60.0%
!! CCAGCCAATGGTGTCACCGA+CGG - chr8_4:51711871-51711890 None:intergenic 60.0%
GGCGGAAGGAGAAGGTGATG+TGG - chr8_4:51712759-51712778 None:intergenic 60.0%
GGAAGGAGAAGGCGATGAGG+CGG - chr8_4:51712777-51712796 None:intergenic 60.0%
GTGGCACCTGTGGAAGGAGA+AGG - chr8_4:51712788-51712807 None:intergenic 60.0%
GACTGGGAAGAAGGGGTGAC+AGG - chr8_4:51712848-51712867 None:intergenic 60.0%
ACCCCTTCTTCCCAGTCTCC+AGG + chr8_4:51712851-51712870 Msa1331950:CDS 60.0%
CCACCTGGAGACTGGGAAGA+AGG - chr8_4:51712857-51712876 None:intergenic 60.0%
CCTTCTTCCCAGTCTCCAGG+TGG + chr8_4:51712854-51712873 Msa1331950:CDS 60.0%
AACTCCAAGAGACGCGGCAC+CGG - chr8_4:51712906-51712925 None:intergenic 60.0%
GCTGGAACAGGGGTAGGAGC+TGG - chr8_4:51711744-51711763 None:intergenic 65.0%
! GTAGCGGCCTTGGTTGGTGC+CGG - chr8_4:51711774-51711793 None:intergenic 65.0%
GCAGGTGTAGCGGCCTTGGT+TGG - chr8_4:51711780-51711799 None:intergenic 65.0%
! TGGTGCTGGGGCAGGTGTAG+CGG - chr8_4:51711790-51711809 None:intergenic 65.0%
GCAGGAGCTGGAGCAGGTGT+TGG - chr8_4:51711828-51711847 None:intergenic 65.0%
CCAGTAGCAGGAGCTGGAGC+AGG - chr8_4:51711834-51711853 None:intergenic 65.0%
CCTGCTCCAGCTCCTGCTAC+TGG + chr8_4:51711831-51711850 Msa1331950:CDS 65.0%
CCGTCGGTGACACCATTGGC+TGG + chr8_4:51711868-51711887 Msa1331950:CDS 65.0%
GGCGATGAGGCGGAAGGAGA+AGG - chr8_4:51712767-51712786 None:intergenic 65.0%
GGAGAAGGCGATGAGGCGGA+AGG - chr8_4:51712773-51712792 None:intergenic 65.0%
AGACCCCGGTGAGGGAGAAC+CGG - chr8_4:51712825-51712844 None:intergenic 65.0%
GTGACAGGAGACCCCGGTGA+GGG - chr8_4:51712833-51712852 None:intergenic 65.0%
GAAGGGGTGACAGGAGACCC+CGG - chr8_4:51712839-51712858 None:intergenic 65.0%
AGCCCCCCTCCTGAGAACTC+CGG + chr8_4:51712884-51712903 Msa1331950:CDS 65.0%
CACCGGAGTTCTCAGGAGGG+GGG - chr8_4:51712889-51712908 None:intergenic 65.0%
GCACCGGAGTTCTCAGGAGG+GGG - chr8_4:51712890-51712909 None:intergenic 65.0%
! GGCACCGGAGTTCTCAGGAG+GGG - chr8_4:51712891-51712910 None:intergenic 65.0%
! CGGCACCGGAGTTCTCAGGA+GGG - chr8_4:51712892-51712911 None:intergenic 65.0%
!! AACTCCGGTGCCGCGTCTCT+TGG + chr8_4:51712899-51712918 Msa1331950:CDS 65.0%
GCCGCGTCTCTTGGAGTTGC+CGG + chr8_4:51712908-51712927 Msa1331950:CDS 65.0%
CCCGGCAACTCCAAGAGACG+CGG - chr8_4:51712912-51712931 None:intergenic 65.0%
CCGCGTCTCTTGGAGTTGCC+GGG + chr8_4:51712909-51712928 Msa1331950:CDS 65.0%
GCTGGAACAGGGGTAGGAGC+TGG - chr8_4:51711744-51711763 None:intergenic 65.0%
! GTAGCGGCCTTGGTTGGTGC+CGG - chr8_4:51711774-51711793 None:intergenic 65.0%
GCAGGTGTAGCGGCCTTGGT+TGG - chr8_4:51711780-51711799 None:intergenic 65.0%
! TGGTGCTGGGGCAGGTGTAG+CGG - chr8_4:51711790-51711809 None:intergenic 65.0%
GCAGGAGCTGGAGCAGGTGT+TGG - chr8_4:51711828-51711847 None:intergenic 65.0%
CCAGTAGCAGGAGCTGGAGC+AGG - chr8_4:51711834-51711853 None:intergenic 65.0%
CCTGCTCCAGCTCCTGCTAC+TGG + chr8_4:51711831-51711850 Msa1331950:CDS 65.0%
CCGTCGGTGACACCATTGGC+TGG + chr8_4:51711868-51711887 Msa1331950:CDS 65.0%
GGCGATGAGGCGGAAGGAGA+AGG - chr8_4:51712767-51712786 None:intergenic 65.0%
GGAGAAGGCGATGAGGCGGA+AGG - chr8_4:51712773-51712792 None:intergenic 65.0%
AGACCCCGGTGAGGGAGAAC+CGG - chr8_4:51712825-51712844 None:intergenic 65.0%
GTGACAGGAGACCCCGGTGA+GGG - chr8_4:51712833-51712852 None:intergenic 65.0%
GAAGGGGTGACAGGAGACCC+CGG - chr8_4:51712839-51712858 None:intergenic 65.0%
AGCCCCCCTCCTGAGAACTC+CGG + chr8_4:51712884-51712903 Msa1331950:CDS 65.0%
CACCGGAGTTCTCAGGAGGG+GGG - chr8_4:51712889-51712908 None:intergenic 65.0%
GCACCGGAGTTCTCAGGAGG+GGG - chr8_4:51712890-51712909 None:intergenic 65.0%
! GGCACCGGAGTTCTCAGGAG+GGG - chr8_4:51712891-51712910 None:intergenic 65.0%
! CGGCACCGGAGTTCTCAGGA+GGG - chr8_4:51712892-51712911 None:intergenic 65.0%
!! AACTCCGGTGCCGCGTCTCT+TGG + chr8_4:51712899-51712918 Msa1331950:CDS 65.0%
GCCGCGTCTCTTGGAGTTGC+CGG + chr8_4:51712908-51712927 Msa1331950:CDS 65.0%
CCCGGCAACTCCAAGAGACG+CGG - chr8_4:51712912-51712931 None:intergenic 65.0%
CCGCGTCTCTTGGAGTTGCC+GGG + chr8_4:51712909-51712928 Msa1331950:CDS 65.0%
TGGGGCAGGTGTAGCGGCCT+TGG - chr8_4:51711784-51711803 None:intergenic 70.0%
GGCGGAGTGGCACCTGTGGA+AGG - chr8_4:51712794-51712813 None:intergenic 70.0%
GGAAGGCGGAGTGGCACCTG+TGG - chr8_4:51712798-51712817 None:intergenic 70.0%
GGAGAACCGGAGGCGGAAGG+CGG - chr8_4:51712812-51712831 None:intergenic 70.0%
GAGGGAGAACCGGAGGCGGA+AGG - chr8_4:51712815-51712834 None:intergenic 70.0%
CGGTGAGGGAGAACCGGAGG+CGG - chr8_4:51712819-51712838 None:intergenic 70.0%
CGCCTCCGGTTCTCCCTCAC+CGG + chr8_4:51712817-51712836 Msa1331950:CDS 70.0%
GCCTCCGGTTCTCCCTCACC+GGG + chr8_4:51712818-51712837 Msa1331950:CDS 70.0%
CCTCCGGTTCTCCCTCACCG+GGG + chr8_4:51712819-51712838 Msa1331950:CDS 70.0%
GGTGACAGGAGACCCCGGTG+AGG - chr8_4:51712834-51712853 None:intergenic 70.0%
GGGGGGCTGACAGAACCACC+TGG - chr8_4:51712872-51712891 None:intergenic 70.0%
! GCGGCACCGGAGTTCTCAGG+AGG - chr8_4:51712893-51712912 None:intergenic 70.0%
! GACGCGGCACCGGAGTTCTC+AGG - chr8_4:51712896-51712915 None:intergenic 70.0%
TGGGGCAGGTGTAGCGGCCT+TGG - chr8_4:51711784-51711803 None:intergenic 70.0%
GGCGGAGTGGCACCTGTGGA+AGG - chr8_4:51712794-51712813 None:intergenic 70.0%
GGAAGGCGGAGTGGCACCTG+TGG - chr8_4:51712798-51712817 None:intergenic 70.0%
GGAGAACCGGAGGCGGAAGG+CGG - chr8_4:51712812-51712831 None:intergenic 70.0%
GAGGGAGAACCGGAGGCGGA+AGG - chr8_4:51712815-51712834 None:intergenic 70.0%
CGGTGAGGGAGAACCGGAGG+CGG - chr8_4:51712819-51712838 None:intergenic 70.0%
CGCCTCCGGTTCTCCCTCAC+CGG + chr8_4:51712817-51712836 Msa1331950:CDS 70.0%
GCCTCCGGTTCTCCCTCACC+GGG + chr8_4:51712818-51712837 Msa1331950:CDS 70.0%
CCTCCGGTTCTCCCTCACCG+GGG + chr8_4:51712819-51712838 Msa1331950:CDS 70.0%
GGTGACAGGAGACCCCGGTG+AGG - chr8_4:51712834-51712853 None:intergenic 70.0%
GGGGGGCTGACAGAACCACC+TGG - chr8_4:51712872-51712891 None:intergenic 70.0%
! GCGGCACCGGAGTTCTCAGG+AGG - chr8_4:51712893-51712912 None:intergenic 70.0%
! GACGCGGCACCGGAGTTCTC+AGG - chr8_4:51712896-51712915 None:intergenic 70.0%
GCCACTCCGCCTTCCGCCTC+CGG + chr8_4:51712803-51712822 Msa1331950:CDS 75.0%
ACCGGAGGCGGAAGGCGGAG+TGG - chr8_4:51712807-51712826 None:intergenic 75.0%
CCCCGGTGAGGGAGAACCGG+AGG - chr8_4:51712822-51712841 None:intergenic 75.0%
GCCACTCCGCCTTCCGCCTC+CGG + chr8_4:51712803-51712822 Msa1331950:CDS 75.0%
ACCGGAGGCGGAAGGCGGAG+TGG - chr8_4:51712807-51712826 None:intergenic 75.0%
CCCCGGTGAGGGAGAACCGG+AGG - chr8_4:51712822-51712841 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51710932 51713314 51710932 ID=Msa1331950;Name=Msa1331950
chr8_4 mRNA 51710932 51713314 51710932 ID=Msa1331950-mRNA-1;Parent=Msa1331950;Name=Msa1331950-mRNA-1;_AED=0.12;_eAED=0.12;_QI=282|1|1|1|1|1|3|338|370
chr8_4 exon 51710932 51711400 51710932 ID=Msa1331950-mRNA-1:exon:15332;Parent=Msa1331950-mRNA-1
chr8_4 exon 51711481 51711966 51711481 ID=Msa1331950-mRNA-1:exon:15333;Parent=Msa1331950-mRNA-1
chr8_4 exon 51712537 51713314 51712537 ID=Msa1331950-mRNA-1:exon:15334;Parent=Msa1331950-mRNA-1
chr8_4 five_prime_UTR 51710932 51711213 51710932 ID=Msa1331950-mRNA-1:five_prime_utr;Parent=Msa1331950-mRNA-1
chr8_4 CDS 51711214 51711400 51711214 ID=Msa1331950-mRNA-1:cds;Parent=Msa1331950-mRNA-1
chr8_4 CDS 51711481 51711966 51711481 ID=Msa1331950-mRNA-1:cds;Parent=Msa1331950-mRNA-1
chr8_4 CDS 51712537 51712976 51712537 ID=Msa1331950-mRNA-1:cds;Parent=Msa1331950-mRNA-1
chr8_4 three_prime_UTR 51712977 51713314 51712977 ID=Msa1331950-mRNA-1:three_prime_utr;Parent=Msa1331950-mRNA-1
Gene Sequence

>Msa1331950

ATGGCAAAGAACCTTAATGTTCTTGTTTTTGTTCTACTTGCAGTTGCTGCAAACCTGTTCCATGGATCATTTGCACAAACAAGACATGTGGTTGGTGATACCACAGGTTGGACTATCCCAACCAACGGTGCTTCATTCTATACCAACTGGGCTTCCAACAAAACCTTCACTGTAGGCGACACTCTCGTGTTCAATTATGCAAGTGGACAACATGATGTTGCTAAGGTAACAAAAACAGCTTACGATAGTTGCAATGGAGCAAACACACTTTTCACCTTAACAAACAGTCCAGCTACCGTGACATTGAACGAAACAGGACAACAAAACTTCATTTGTGCCGTTCCAGGACATTGTTCAGCTGGACAAAAACTTTCAATTAACGTTGTTAAAGCTTCTACTTCACCTGTTTCTGCTCCAACTCCAAGTGCTTCTCCACCTAAGGCTACTCCAGCTCCTACCCCTGTTCCAGCAAAAGCACCGGCACCAACCAAGGCCGCTACACCTGCCCCAGCACCATCTACTACTGCTTCACCAACACCTGCTCCAGCTCCTGCTACTGGACCTGTTACTTACACCGTCGGTGACACCATTGGCTGGACCATTCCATCTAACGGTGCTGCTGCTTATACAACCTGGGCTTCTCGCAAGTCTTTCAAAGTTGGAGACATCCTTGTTTTCAATTTCCAATTGAATGCACACAACGTGGAAGAAGTGACAAAGGAAAAGTATGATTCATGCAACTCAGCTTCTCCAATTGCAACTTTCAGCAACCCACCAGTGAGAGTAACACTTAACAAAACTGGTACTCATTACTATATCTGTGGTGTTACTGGACACTGCTCTGCAGGCCAAAAGCTTTCCATCAATGTTGGTAGTGGTAGCAGCAGCCCTGCCACATCACCTTCTCCTTCCGCCTCATCGCCTTCTCCTTCCACAGGTGCCACTCCGCCTTCCGCCTCCGGTTCTCCCTCACCGGGGTCTCCTGTCACCCCTTCTTCCCAGTCTCCAGGTGGTTCTGTCAGCCCCCCTCCTGAGAACTCCGGTGCCGCGTCTCTTGGAGTTGCCGGGTTATTTGTCACCGTCCTCTCAATTGCAGCTGCATTTTTCTGTTAG
Protein sequence

>Msa1331950

MAKNLNVLVFVLLAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNYASGQHDVAKVTKTAYDSCNGANTLFTLTNSPATVTLNETGQQNFICAVPGHCSAGQKLSINVVKASTSPVSAPTPSASPPKATPAPTPVPAKAPAPTKAATPAPAPSTTASPTPAPAPATGPVTYTVGDTIGWTIPSNGAAAYTTWASRKSFKVGDILVFNFQLNAHNVEEVTKEKYDSCNSASPIATFSNPPVRVTLNKTGTHYYICGVTGHCSAGQKLSINVGSGSSSPATSPSPSASSPSPSTGATPPSASGSPSPGSPVTPSSQSPGGSVSPPPENSGAASLGVAGLFVTVLSIAAAFFC*