Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356960 | AAZ98791.1 | 97.959 | 98 | 2 | 0 | 1 | 98 | 1 | 98 | 1.24e-63 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356960 | sp|Q06445|CYTI_VIGUN | 78.351 | 97 | 21 | 0 | 1 | 97 | 1 | 97 | 1.64e-50 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356960 | Q3S3G8 | 97.959 | 98 | 2 | 0 | 1 | 98 | 1 | 98 | 5.93e-64 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0356960 | -0.807705 | 4.435940e-50 | -8.615850e-47 |
| Msa0006390 | Msa0356960 | 0.804923 | 1.711032e-49 | -8.615850e-47 |
| Msa0011720 | Msa0356960 | 0.860509 | 1.965158e-63 | -8.615850e-47 |
| Msa0014800 | Msa0356960 | 0.829201 | 5.878049e-55 | -8.615850e-47 |
| Msa0033440 | Msa0356960 | 0.816999 | 4.140122e-52 | -8.615850e-47 |
| Msa0035150 | Msa0356960 | 0.802459 | 5.554228e-49 | -8.615850e-47 |
| Msa0048000 | Msa0356960 | 0.858112 | 1.029846e-62 | -8.615850e-47 |
| Msa0050730 | Msa0356960 | 0.863139 | 3.081422e-64 | -8.615850e-47 |
| Msa0050760 | Msa0356960 | 0.892647 | 1.309349e-74 | -8.615850e-47 |
| Msa0060600 | Msa0356960 | 0.828272 | 9.855863e-55 | -8.615850e-47 |
| Msa0064350 | Msa0356960 | 0.836438 | 9.355620e-57 | -8.615850e-47 |
| Msa0073170 | Msa0356960 | 0.806365 | 8.521593e-50 | -8.615850e-47 |
| Msa0078750 | Msa0356960 | 0.850898 | 1.260457e-60 | -8.615850e-47 |
| Msa0089360 | Msa0356960 | 0.845600 | 3.671469e-59 | -8.615850e-47 |
| Msa0090100 | Msa0356960 | 0.822859 | 1.890679e-53 | -8.615850e-47 |
| Msa0090340 | Msa0356960 | 0.810369 | 1.192950e-50 | -8.615850e-47 |
| Msa0092990 | Msa0356960 | 0.849778 | 2.599135e-60 | -8.615850e-47 |
| Msa0096450 | Msa0356960 | 0.837750 | 4.321938e-57 | -8.615850e-47 |
| Msa0105340 | Msa0356960 | 0.834345 | 3.163630e-56 | -8.615850e-47 |
| Msa0105420 | Msa0356960 | 0.802099 | 6.589103e-49 | -8.615850e-47 |
| Msa0108560 | Msa0356960 | 0.815635 | 8.356683e-52 | -8.615850e-47 |
| Msa0120340 | Msa0356960 | 0.841295 | 5.183074e-58 | -8.615850e-47 |
| Msa0137570 | Msa0356960 | 0.812644 | 3.821760e-51 | -8.615850e-47 |
| Msa0140860 | Msa0356960 | 0.806437 | 8.228076e-50 | -8.615850e-47 |
| Msa0140910 | Msa0356960 | 0.830520 | 2.803478e-55 | -8.615850e-47 |
| Msa0148100 | Msa0356960 | 0.804840 | 1.780456e-49 | -8.615850e-47 |
| Msa0148360 | Msa0356960 | 0.801927 | 7.147057e-49 | -8.615850e-47 |
| Msa0151690 | Msa0356960 | 0.825231 | 5.246743e-54 | -8.615850e-47 |
| Msa0173070 | Msa0356960 | 0.807644 | 4.570464e-50 | -8.615850e-47 |
| Msa0184020 | Msa0356960 | 0.807562 | 4.757093e-50 | -8.615850e-47 |
| Msa0188630 | Msa0356960 | 0.802540 | 5.344797e-49 | -8.615850e-47 |
| Msa0205850 | Msa0356960 | 0.802488 | 5.479015e-49 | -8.615850e-47 |
| Msa0210250 | Msa0356960 | 0.804242 | 2.372845e-49 | -8.615850e-47 |
| Msa0217400 | Msa0356960 | 0.804190 | 2.433399e-49 | -8.615850e-47 |
| Msa0220580 | Msa0356960 | 0.834246 | 3.349529e-56 | -8.615850e-47 |
| Msa0220740 | Msa0356960 | 0.821757 | 3.408021e-53 | -8.615850e-47 |
| Msa0233300 | Msa0356960 | 0.805008 | 1.642206e-49 | -8.615850e-47 |
| Msa0236630 | Msa0356960 | 0.811033 | 8.572317e-51 | -8.615850e-47 |
| Msa0243710 | Msa0356960 | 0.847480 | 1.126062e-59 | -8.615850e-47 |
| Msa0250670 | Msa0356960 | 0.810459 | 1.140731e-50 | -8.615850e-47 |
| Msa0257250 | Msa0356960 | 0.802867 | 4.576529e-49 | -8.615850e-47 |
| Msa0258760 | Msa0356960 | 0.849038 | 4.177627e-60 | -8.615850e-47 |
| Msa0260810 | Msa0356960 | 0.863181 | 2.989850e-64 | -8.615850e-47 |
| Msa0269450 | Msa0356960 | 0.835661 | 1.473360e-56 | -8.615850e-47 |
| Msa0282250 | Msa0356960 | 0.834219 | 3.401070e-56 | -8.615850e-47 |
| Msa0287650 | Msa0356960 | 0.811073 | 8.401697e-51 | -8.615850e-47 |
| Msa0290650 | Msa0356960 | 0.802784 | 4.760480e-49 | -8.615850e-47 |
| Msa0296560 | Msa0356960 | 0.808418 | 3.127829e-50 | -8.615850e-47 |
| Msa0296760 | Msa0356960 | 0.814833 | 1.259420e-51 | -8.615850e-47 |
| Msa0306210 | Msa0356960 | -0.810917 | 9.082272e-51 | -8.615850e-47 |
| Msa0311700 | Msa0356960 | 0.848882 | 4.615517e-60 | -8.615850e-47 |
| Msa0315290 | Msa0356960 | 0.804912 | 1.719871e-49 | -8.615850e-47 |
| Msa0323080 | Msa0356960 | 0.808896 | 2.472019e-50 | -8.615850e-47 |
| Msa0323620 | Msa0356960 | 0.803439 | 3.484553e-49 | -8.615850e-47 |
| Msa0326670 | Msa0356960 | 0.805641 | 1.209917e-49 | -8.615850e-47 |
| Msa0334360 | Msa0356960 | 0.816839 | 4.495742e-52 | -8.615850e-47 |
| Msa0335040 | Msa0356960 | 0.814287 | 1.664049e-51 | -8.615850e-47 |
| Msa0343810 | Msa0356960 | 0.804570 | 2.027269e-49 | -8.615850e-47 |
| Msa0346430 | Msa0356960 | 0.859248 | 4.717261e-63 | -8.615850e-47 |
| Msa0356960 | Msa0371540 | 0.800770 | 1.233303e-48 | -8.615850e-47 |
| Msa0356960 | Msa0373930 | 0.826818 | 2.201675e-54 | -8.615850e-47 |
| Msa0356960 | Msa0376590 | 0.810738 | 9.929891e-51 | -8.615850e-47 |
| Msa0356960 | Msa0379640 | 0.831343 | 1.761962e-55 | -8.615850e-47 |
| Msa0356960 | Msa0380040 | 0.824947 | 6.123401e-54 | -8.615850e-47 |
| Msa0356960 | Msa0389810 | 0.821955 | 3.065403e-53 | -8.615850e-47 |
| Msa0356960 | Msa0391690 | 0.858106 | 1.034296e-62 | -8.615850e-47 |
| Msa0356960 | Msa0392710 | 0.803818 | 2.907916e-49 | -8.615850e-47 |
| Msa0356960 | Msa0393710 | 0.804384 | 2.217306e-49 | -8.615850e-47 |
| Msa0356960 | Msa0394340 | 0.830181 | 3.392827e-55 | -8.615850e-47 |
| Msa0356960 | Msa0403150 | 0.801862 | 7.368185e-49 | -8.615850e-47 |
| Msa0356960 | Msa0416300 | 0.803229 | 3.851621e-49 | -8.615850e-47 |
| Msa0356960 | Msa0426330 | 0.805909 | 1.063010e-49 | -8.615850e-47 |
| Msa0356960 | Msa0429290 | 0.805513 | 1.287390e-49 | -8.615850e-47 |
| Msa0356960 | Msa0442200 | 0.818720 | 1.691435e-52 | -8.615850e-47 |
| Msa0356960 | Msa0442850 | 0.804851 | 1.771089e-49 | -8.615850e-47 |
| Msa0356960 | Msa0449760 | 0.891405 | 4.094228e-74 | -8.615850e-47 |
| Msa0356960 | Msa0449820 | 0.800755 | 1.242034e-48 | -8.615850e-47 |
| Msa0356960 | Msa0449830 | 0.900973 | 4.284503e-78 | -8.615850e-47 |
| Msa0356960 | Msa0453350 | 0.804923 | 1.711032e-49 | -8.615850e-47 |
| Msa0356960 | Msa0458440 | 0.806068 | 9.842180e-50 | -8.615850e-47 |
| Msa0356960 | Msa0464900 | 0.839200 | 1.826996e-57 | -8.615850e-47 |
| Msa0356960 | Msa0466060 | 0.811850 | 5.695822e-51 | -8.615850e-47 |
| Msa0356960 | Msa0468130 | 0.804903 | 1.727475e-49 | -8.615850e-47 |
| Msa0356960 | Msa0471800 | 0.802803 | 4.716776e-49 | -8.615850e-47 |
| Msa0356960 | Msa0473240 | 0.823696 | 1.205621e-53 | -8.615850e-47 |
| Msa0356960 | Msa0475580 | 0.812905 | 3.350025e-51 | -8.615850e-47 |
| Msa0356960 | Msa0477130 | -0.809886 | 1.516039e-50 | -8.615850e-47 |
| Msa0356960 | Msa0482190 | -0.822994 | 1.758790e-53 | -8.615850e-47 |
| Msa0356960 | Msa0484780 | 0.829754 | 4.313914e-55 | -8.615850e-47 |
| Msa0356960 | Msa0485500 | -0.816395 | 5.654675e-52 | -8.615850e-47 |
| Msa0356960 | Msa0489030 | 0.809205 | 2.122518e-50 | -8.615850e-47 |
| Msa0356960 | Msa0489610 | 0.823009 | 1.743989e-53 | -8.615850e-47 |
| Msa0356960 | Msa0493630 | 0.804034 | 2.621261e-49 | -8.615850e-47 |
| Msa0356960 | Msa0516370 | 0.809440 | 1.890485e-50 | -8.615850e-47 |
| Msa0356960 | Msa0517340 | 0.810941 | 8.973715e-51 | -8.615850e-47 |
| Msa0356960 | Msa0521250 | 0.804301 | 2.307140e-49 | -8.615850e-47 |
| Msa0356960 | Msa0523460 | 0.844296 | 8.253845e-59 | -8.615850e-47 |
| Msa0356960 | Msa0536130 | 0.801313 | 9.549074e-49 | -8.615850e-47 |
| Msa0356960 | Msa0536220 | 0.825076 | 5.707775e-54 | -8.615850e-47 |
| Msa0356960 | Msa0539750 | 0.808851 | 2.528216e-50 | -8.615850e-47 |
| Msa0356960 | Msa0543900 | 0.806449 | 8.183618e-50 | -8.615850e-47 |
| Msa0356960 | Msa0553220 | -0.810922 | 9.059489e-51 | -8.615850e-47 |
| Msa0356960 | Msa0554740 | 0.800367 | 1.490086e-48 | -8.615850e-47 |
| Msa0356960 | Msa0556240 | 0.810227 | 1.280132e-50 | -8.615850e-47 |
| Msa0356960 | Msa0577220 | 0.813410 | 2.595780e-51 | -8.615850e-47 |
| Msa0356960 | Msa0578970 | 0.888169 | 7.493989e-73 | -8.615850e-47 |
| Msa0356960 | Msa0585230 | 0.810556 | 1.087018e-50 | -8.615850e-47 |
| Msa0356960 | Msa0587690 | 0.820893 | 5.392010e-53 | -8.615850e-47 |
| Msa0356960 | Msa0591710 | 0.819972 | 8.769421e-53 | -8.615850e-47 |
| Msa0356960 | Msa0595850 | 0.806380 | 8.462676e-50 | -8.615850e-47 |
| Msa0356960 | Msa0599580 | 0.829988 | 3.782058e-55 | -8.615850e-47 |
| Msa0356960 | Msa0599770 | 0.815662 | 8.241777e-52 | -8.615850e-47 |
| Msa0356960 | Msa0599890 | 0.820952 | 5.224973e-53 | -8.615850e-47 |
| Msa0356960 | Msa0608710 | 0.815187 | 1.051249e-51 | -8.615850e-47 |
| Msa0356960 | Msa0610590 | 0.889385 | 2.540525e-73 | -8.615850e-47 |
| Msa0356960 | Msa0622340 | 0.802125 | 6.507129e-49 | -8.615850e-47 |
| Msa0356960 | Msa0626090 | 0.844567 | 6.979749e-59 | -8.615850e-47 |
| Msa0356960 | Msa0630960 | 0.810462 | 1.139143e-50 | -8.615850e-47 |
| Msa0356960 | Msa0631990 | 0.863990 | 1.677806e-64 | -8.615850e-47 |
| Msa0356960 | Msa0644840 | 0.806422 | 8.289758e-50 | -8.615850e-47 |
| Msa0356960 | Msa0647450 | -0.806635 | 7.474314e-50 | -8.615850e-47 |
| Msa0356960 | Msa0649970 | 0.801501 | 8.738231e-49 | -8.615850e-47 |
| Msa0356960 | Msa0651190 | 0.878870 | 1.978489e-69 | -8.615850e-47 |
| Msa0356960 | Msa0651790 | 0.815945 | 7.126305e-52 | -8.615850e-47 |
| Msa0356960 | Msa0661190 | -0.804710 | 1.895490e-49 | -8.615850e-47 |
| Msa0356960 | Msa0662650 | 0.839775 | 1.294775e-57 | -8.615850e-47 |
| Msa0356960 | Msa0663240 | 0.813100 | 3.036605e-51 | -8.615850e-47 |
| Msa0356960 | Msa0670660 | 0.872641 | 2.719689e-67 | -8.615850e-47 |
| Msa0356960 | Msa0672690 | 0.804164 | 2.463336e-49 | -8.615850e-47 |
| Msa0356960 | Msa0678820 | 0.813406 | 2.601631e-51 | -8.615850e-47 |
| Msa0356960 | Msa0688480 | 0.824362 | 8.410425e-54 | -8.615850e-47 |
| Msa0356960 | Msa0692110 | 0.805842 | 1.098242e-49 | -8.615850e-47 |
| Msa0356960 | Msa0692230 | 0.803295 | 3.732387e-49 | -8.615850e-47 |
| Msa0356960 | Msa0694250 | 0.816972 | 4.197367e-52 | -8.615850e-47 |
| Msa0356960 | Msa0708860 | 0.844620 | 6.754591e-59 | -8.615850e-47 |
| Msa0356960 | Msa0713790 | 0.803795 | 2.939265e-49 | -8.615850e-47 |
| Msa0356960 | Msa0720480 | 0.830942 | 2.209981e-55 | -8.615850e-47 |
| Msa0356960 | Msa0731710 | 0.803058 | 4.177492e-49 | -8.615850e-47 |
| Msa0356960 | Msa0743260 | 0.840971 | 6.305034e-58 | -8.615850e-47 |
| Msa0356960 | Msa0749520 | 0.804583 | 2.014676e-49 | -8.615850e-47 |
| Msa0356960 | Msa0756310 | 0.822928 | 1.822325e-53 | -8.615850e-47 |
| Msa0356960 | Msa0767080 | 0.823959 | 1.045907e-53 | -8.615850e-47 |
| Msa0356960 | Msa0777230 | 0.813359 | 2.664420e-51 | -8.615850e-47 |
| Msa0356960 | Msa0787470 | 0.807052 | 6.101802e-50 | -8.615850e-47 |
| Msa0356960 | Msa0791910 | 0.809454 | 1.876804e-50 | -8.615850e-47 |
| Msa0356960 | Msa0794510 | -0.808303 | 3.308787e-50 | -8.615850e-47 |
| Msa0356960 | Msa0820770 | 0.806446 | 8.192742e-50 | -8.615850e-47 |
| Msa0356960 | Msa0835730 | 0.812977 | 3.231866e-51 | -8.615850e-47 |
| Msa0356960 | Msa0835920 | 0.823660 | 1.229297e-53 | -8.615850e-47 |
| Msa0356960 | Msa0845000 | 0.824122 | 9.577366e-54 | -8.615850e-47 |
| Msa0356960 | Msa0846810 | 0.851990 | 6.191223e-61 | -8.615850e-47 |
| Msa0356960 | Msa0853170 | 0.800352 | 1.500239e-48 | -8.615850e-47 |
| Msa0356960 | Msa0861090 | 0.801259 | 9.798807e-49 | -8.615850e-47 |
| Msa0356960 | Msa0874500 | 0.807772 | 4.292446e-50 | -8.615850e-47 |
| Msa0356960 | Msa0875620 | 0.812227 | 4.713447e-51 | -8.615850e-47 |
| Msa0356960 | Msa0876850 | -0.835078 | 2.068429e-56 | -8.615850e-47 |
| Msa0356960 | Msa0877410 | 0.803597 | 3.230751e-49 | -8.615850e-47 |
| Msa0356960 | Msa0882510 | 0.817953 | 2.523582e-52 | -8.615850e-47 |
| Msa0356960 | Msa0891600 | -0.810267 | 1.254966e-50 | -8.615850e-47 |
| Msa0356960 | Msa0896210 | 0.852995 | 3.200478e-61 | -8.615850e-47 |
| Msa0356960 | Msa0896220 | 0.847474 | 1.130367e-59 | -8.615850e-47 |
| Msa0356960 | Msa0899230 | 0.835221 | 1.904252e-56 | -8.615850e-47 |
| Msa0356960 | Msa0907070 | 0.808517 | 2.979116e-50 | -8.615850e-47 |
| Msa0356960 | Msa0908170 | 0.861039 | 1.357482e-63 | -8.615850e-47 |
| Msa0356960 | Msa0910980 | -0.857100 | 2.054488e-62 | -8.615850e-47 |
| Msa0356960 | Msa0924310 | 0.811121 | 8.200778e-51 | -8.615850e-47 |
| Msa0356960 | Msa0927670 | 0.849421 | 3.269092e-60 | -8.615850e-47 |
| Msa0356960 | Msa0933230 | 0.825217 | 5.286566e-54 | -8.615850e-47 |
| Msa0356960 | Msa0933310 | 0.805157 | 1.528476e-49 | -8.615850e-47 |
| Msa0356960 | Msa0942080 | -0.841654 | 4.168576e-58 | -8.615850e-47 |
| Msa0356960 | Msa0947590 | 0.830148 | 3.456261e-55 | -8.615850e-47 |
| Msa0356960 | Msa0960160 | 0.828238 | 1.004613e-54 | -8.615850e-47 |
| Msa0356960 | Msa0971090 | 0.806903 | 6.561824e-50 | -8.615850e-47 |
| Msa0356960 | Msa0982240 | 0.805047 | 1.611825e-49 | -8.615850e-47 |
| Msa0356960 | Msa0982270 | 0.814688 | 1.356649e-51 | -8.615850e-47 |
| Msa0356960 | Msa0992490 | -0.824140 | 9.482147e-54 | -8.615850e-47 |
| Msa0356960 | Msa0993290 | 0.805351 | 1.392234e-49 | -8.615850e-47 |
| Msa0356960 | Msa0993600 | 0.809276 | 2.050302e-50 | -8.615850e-47 |
| Msa0356960 | Msa0996080 | 0.811556 | 6.599934e-51 | -8.615850e-47 |
| Msa0356960 | Msa0999040 | 0.847565 | 1.066963e-59 | -8.615850e-47 |
| Msa0356960 | Msa1010350 | 0.802292 | 6.012609e-49 | -8.615850e-47 |
| Msa0356960 | Msa1019840 | -0.824038 | 1.001970e-53 | -8.615850e-47 |
| Msa0356960 | Msa1026760 | 0.813491 | 2.491744e-51 | -8.615850e-47 |
| Msa0356960 | Msa1026790 | 0.819627 | 1.051902e-52 | -8.615850e-47 |
| Msa0356960 | Msa1039880 | 0.840498 | 8.388612e-58 | -8.615850e-47 |
| Msa0356960 | Msa1043050 | 0.801679 | 8.037204e-49 | -8.615850e-47 |
| Msa0356960 | Msa1043390 | 0.818127 | 2.304832e-52 | -8.615850e-47 |
| Msa0356960 | Msa1043450 | 0.816814 | 4.554820e-52 | -8.615850e-47 |
| Msa0356960 | Msa1043920 | 0.804644 | 1.956620e-49 | -8.615850e-47 |
| Msa0356960 | Msa1045200 | 0.810491 | 1.122640e-50 | -8.615850e-47 |
| Msa0356960 | Msa1060220 | 0.814530 | 1.469852e-51 | -8.615850e-47 |
| Msa0356960 | Msa1068200 | -0.809449 | 1.881483e-50 | -8.615850e-47 |
| Msa0356960 | Msa1075080 | -0.802658 | 5.054105e-49 | -8.615850e-47 |
| Msa0356960 | Msa1075220 | -0.838247 | 3.221024e-57 | -8.615850e-47 |
| Msa0356960 | Msa1080160 | 0.806252 | 9.001462e-50 | -8.615850e-47 |
| Msa0356960 | Msa1081590 | 0.810319 | 1.222650e-50 | -8.615850e-47 |
| Msa0356960 | Msa1082500 | 0.822273 | 2.587443e-53 | -8.615850e-47 |
| Msa0356960 | Msa1087470 | 0.851185 | 1.046044e-60 | -8.615850e-47 |
| Msa0356960 | Msa1092090 | 0.828449 | 8.933808e-55 | -8.615850e-47 |
| Msa0356960 | Msa1095480 | 0.808764 | 2.638842e-50 | -8.615850e-47 |
| Msa0356960 | Msa1097840 | 0.806766 | 7.014963e-50 | -8.615850e-47 |
| Msa0356960 | Msa1111180 | 0.825369 | 4.867138e-54 | -8.615850e-47 |
| Msa0356960 | Msa1116130 | -0.815917 | 7.228891e-52 | -8.615850e-47 |
| Msa0356960 | Msa1116150 | 0.817377 | 3.403750e-52 | -8.615850e-47 |
| Msa0356960 | Msa1116690 | 0.829763 | 4.291955e-55 | -8.615850e-47 |
| Msa0356960 | Msa1130270 | -0.808620 | 2.831889e-50 | -8.615850e-47 |
| Msa0356960 | Msa1131940 | -0.824029 | 1.007097e-53 | -8.615850e-47 |
| Msa0356960 | Msa1133710 | 0.804581 | 2.016797e-49 | -8.615850e-47 |
| Msa0356960 | Msa1137600 | 0.818979 | 1.477318e-52 | -8.615850e-47 |
| Msa0356960 | Msa1139000 | -0.806901 | 6.567862e-50 | -8.615850e-47 |
| Msa0356960 | Msa1151710 | 0.805865 | 1.086036e-49 | -8.615850e-47 |
| Msa0356960 | Msa1162550 | -0.831615 | 1.510138e-55 | -8.615850e-47 |
| Msa0356960 | Msa1170800 | 0.807538 | 4.814535e-50 | -8.615850e-47 |
| Msa0356960 | Msa1172670 | 0.816270 | 6.028374e-52 | -8.615850e-47 |
| Msa0356960 | Msa1179460 | 0.802552 | 5.313486e-49 | -8.615850e-47 |
| Msa0356960 | Msa1199560 | 0.820436 | 6.867357e-53 | -8.615850e-47 |
| Msa0356960 | Msa1205130 | 0.800616 | 1.325736e-48 | -8.615850e-47 |
| Msa0356960 | Msa1207380 | 0.813175 | 2.924274e-51 | -8.615850e-47 |
| Msa0356960 | Msa1211150 | -0.853375 | 2.491290e-61 | -8.615850e-47 |
| Msa0356960 | Msa1217810 | 0.823048 | 1.708014e-53 | -8.615850e-47 |
| Msa0356960 | Msa1218650 | 0.800504 | 1.397572e-48 | -8.615850e-47 |
| Msa0356960 | Msa1218960 | 0.807239 | 5.570871e-50 | -8.615850e-47 |
| Msa0356960 | Msa1219430 | 0.808705 | 2.715899e-50 | -8.615850e-47 |
| Msa0356960 | Msa1228210 | 0.806062 | 9.870707e-50 | -8.615850e-47 |
| Msa0356960 | Msa1233500 | 0.826564 | 2.531449e-54 | -8.615850e-47 |
| Msa0356960 | Msa1233890 | 0.833285 | 5.822130e-56 | -8.615850e-47 |
| Msa0356960 | Msa1239910 | 0.801975 | 6.987670e-49 | -8.615850e-47 |
| Msa0356960 | Msa1242220 | 0.800628 | 1.318304e-48 | -8.615850e-47 |
| Msa0356960 | Msa1244830 | 0.807252 | 5.535810e-50 | -8.615850e-47 |
| Msa0356960 | Msa1252070 | 0.813763 | 2.171537e-51 | -8.615850e-47 |
| Msa0356960 | Msa1258380 | -0.822414 | 2.399008e-53 | -8.615850e-47 |
| Msa0356960 | Msa1259590 | -0.802218 | 6.226080e-49 | -8.615850e-47 |
| Msa0356960 | Msa1271280 | 0.806849 | 6.737411e-50 | -8.615850e-47 |
| Msa0356960 | Msa1271300 | 0.810186 | 1.306589e-50 | -8.615850e-47 |
| Msa0356960 | Msa1277280 | 0.830268 | 3.232170e-55 | -8.615850e-47 |
| Msa0356960 | Msa1279210 | 0.805384 | 1.370176e-49 | -8.615850e-47 |
| Msa0356960 | Msa1279650 | 0.883895 | 3.045377e-71 | -8.615850e-47 |
| Msa0356960 | Msa1283860 | 0.804523 | 2.073899e-49 | -8.615850e-47 |
| Msa0356960 | Msa1288420 | 0.826467 | 2.670510e-54 | -8.615850e-47 |
| Msa0356960 | Msa1289010 | 0.828318 | 9.608091e-55 | -8.615850e-47 |
| Msa0356960 | Msa1292730 | 0.836047 | 1.176140e-56 | -8.615850e-47 |
| Msa0356960 | Msa1296940 | 0.859848 | 3.112760e-63 | -8.615850e-47 |
| Msa0356960 | Msa1299300 | -0.840834 | 6.848711e-58 | -8.615850e-47 |
| Msa0356960 | Msa1305750 | 0.804054 | 2.596872e-49 | -8.615850e-47 |
| Msa0356960 | Msa1307740 | 0.807939 | 3.955734e-50 | -8.615850e-47 |
| Msa0356960 | Msa1316560 | -0.803701 | 3.074105e-49 | -8.615850e-47 |
| Msa0356960 | Msa1318240 | 0.817959 | 2.515794e-52 | -8.615850e-47 |
| Msa0356960 | Msa1322190 | 0.813137 | 2.979719e-51 | -8.615850e-47 |
| Msa0356960 | Msa1322860 | 0.811953 | 5.409863e-51 | -8.615850e-47 |
| Msa0356960 | Msa1322890 | 0.800509 | 1.393830e-48 | -8.615850e-47 |
| Msa0356960 | Msa1328700 | 0.806459 | 8.142869e-50 | -8.615850e-47 |
| Msa0356960 | Msa1340020 | 0.818771 | 1.647470e-52 | -8.615850e-47 |
| Msa0356960 | Msa1340650 | 0.836335 | 9.939054e-57 | -8.615850e-47 |
| Msa0356960 | Msa1348950 | 0.806139 | 9.510808e-50 | -8.615850e-47 |
| Msa0356960 | Msa1357530 | 0.810306 | 1.230864e-50 | -8.615850e-47 |
| Msa0356960 | Msa1358610 | -0.806763 | 7.023814e-50 | -8.615850e-47 |
| Msa0356960 | Msa1359650 | -0.829272 | 5.648025e-55 | -8.615850e-47 |
| Msa0356960 | Msa1362880 | 0.824863 | 6.411210e-54 | -8.615850e-47 |
| Msa0356960 | Msa1363890 | 0.811444 | 6.981666e-51 | -8.615850e-47 |
| Msa0356960 | Msa1365040 | -0.836008 | 1.203725e-56 | -8.615850e-47 |
| Msa0356960 | Msa1370340 | 0.813674 | 2.271574e-51 | -8.615850e-47 |
| Msa0356960 | Msa1382160 | 0.819994 | 8.671067e-53 | -8.615850e-47 |
| Msa0356960 | Msa1384040 | 0.807031 | 6.163830e-50 | -8.615850e-47 |
| Msa0356960 | Msa1384350 | 0.812046 | 5.162792e-51 | -8.615850e-47 |
| Msa0356960 | Msa1386430 | 0.835695 | 1.444970e-56 | -8.615850e-47 |
| Msa0356960 | Msa1393040 | 0.805528 | 1.278027e-49 | -8.615850e-47 |
| Msa0356960 | Msa1393740 | 0.805199 | 1.498160e-49 | -8.615850e-47 |
| Msa0356960 | Msa1396830 | 0.805124 | 1.553068e-49 | -8.615850e-47 |
| Msa0356960 | Msa1404540 | 0.856672 | 2.746916e-62 | -8.615850e-47 |
| Msa0356960 | Msa1408790 | 0.856377 | 3.352916e-62 | -8.615850e-47 |
| Msa0356960 | Msa1411020 | 0.833217 | 6.055254e-56 | -8.615850e-47 |
| Msa0356960 | Msa1412890 | 0.802866 | 4.578728e-49 | -8.615850e-47 |
| Msa0356960 | Msa1419110 | 0.816550 | 5.218950e-52 | -8.615850e-47 |
| Msa0356960 | Msa1420490 | 0.820183 | 7.849162e-53 | -8.615850e-47 |
| Msa0356960 | Msa1423390 | 0.819166 | 1.339394e-52 | -8.615850e-47 |
| Msa0356960 | Msa1424290 | 0.828576 | 8.325076e-55 | -8.615850e-47 |
| Msa0356960 | Msa1424450 | 0.800114 | 1.677451e-48 | -8.615850e-47 |
| Msa0356960 | Msa1425010 | 0.812729 | 3.660778e-51 | -8.615850e-47 |
| Msa0356960 | Msa1431060 | 0.848418 | 6.206414e-60 | -8.615850e-47 |
| Msa0356960 | Msa1434350 | 0.834999 | 2.165925e-56 | -8.615850e-47 |
| Msa0356960 | Msa1436040 | 0.848944 | 4.438741e-60 | -8.615850e-47 |
| Msa0356960 | Msa1439230 | 0.807755 | 4.329277e-50 | -8.615850e-47 |
| Msa0356960 | Msa1439320 | 0.837162 | 6.116318e-57 | -8.615850e-47 |
| Msa0356960 | Msa1440370 | 0.813052 | 3.111884e-51 | -8.615850e-47 |
| Msa0356960 | Msa1440600 | 0.889228 | 2.923786e-73 | -8.615850e-47 |
| Msa0356960 | Msa1440810 | 0.817950 | 2.528187e-52 | -8.615850e-47 |
| Msa0356960 | Msa1444250 | -0.818785 | 1.635579e-52 | -8.615850e-47 |
| Msa0356960 | Msa1444740 | 0.820900 | 5.370466e-53 | -8.615850e-47 |
| Msa0356960 | Msa1445030 | 0.803421 | 3.514266e-49 | -8.615850e-47 |
| Msa0356960 | Msa1448510 | 0.801655 | 8.126150e-49 | -8.615850e-47 |
| Msa0356960 | Msa1451620 | -0.817523 | 3.155011e-52 | -8.615850e-47 |
| Msa0356960 | Msa1453560 | 0.804354 | 2.248661e-49 | -8.615850e-47 |
| Msa0356960 | Msa1457670 | -0.841863 | 3.669807e-58 | -8.615850e-47 |
| Msa0356960 | Msa1464940 | 0.822251 | 2.617927e-53 | -8.615850e-47 |
| Msa0356960 | Msa1466730 | 0.824625 | 7.292618e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356960 | MtrunA17_Chr3g0093771 | 96.939 | 98 | 3 | 0 | 1 | 98 | 25 | 122 | 8.22e-67 | 196 |
| Msa0356960 | MtrunA17_Chr8g0354141 | 64.286 | 98 | 34 | 1 | 1 | 97 | 38 | 135 | 3.46e-40 | 132 |
| Msa0356960 | MtrunA17_Chr5g0441261 | 63.000 | 100 | 34 | 1 | 1 | 97 | 1 | 100 | 6.80e-40 | 127 |
| Msa0356960 | MtrunA17_Chr3g0097041 | 48.936 | 94 | 48 | 0 | 4 | 97 | 62 | 155 | 1.20e-29 | 103 |
| Msa0356960 | MtrunA17_Chr4g0076001 | 42.667 | 75 | 43 | 0 | 15 | 89 | 38 | 112 | 2.52e-16 | 68.6 |
| Msa0356960 | MtrunA17_Chr3g0096881 | 46.250 | 80 | 40 | 2 | 20 | 97 | 78 | 156 | 1.04e-14 | 67.0 |
| Msa0356960 | MtrunA17_Chr2g0290101 | 42.254 | 71 | 41 | 0 | 22 | 92 | 46 | 116 | 8.38e-13 | 59.3 |
| Msa0356960 | MtrunA17_Chr8g0386751 | 36.709 | 79 | 50 | 0 | 8 | 86 | 62 | 140 | 1.53e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356960 | AT3G12490.1 | 69.072 | 97 | 30 | 0 | 1 | 97 | 1 | 97 | 1.19e-45 | 144 |
| Msa0356960 | AT3G12490.2 | 69.072 | 97 | 30 | 0 | 1 | 97 | 34 | 130 | 1.15e-44 | 144 |
| Msa0356960 | AT2G40880.1 | 63.218 | 87 | 32 | 0 | 4 | 90 | 35 | 121 | 8.96e-38 | 123 |
| Msa0356960 | AT5G12140.1 | 56.044 | 91 | 40 | 0 | 4 | 94 | 10 | 100 | 2.63e-34 | 114 |
| Msa0356960 | AT5G05110.1 | 55.682 | 88 | 38 | 1 | 4 | 90 | 45 | 132 | 1.79e-27 | 100 |
| Msa0356960 | AT5G47550.1 | 38.571 | 70 | 42 | 1 | 22 | 90 | 45 | 114 | 1.07e-11 | 57.0 |
| Msa0356960 | AT4G16500.2 | 42.254 | 71 | 40 | 1 | 21 | 90 | 45 | 115 | 1.92e-11 | 56.2 |
| Msa0356960 | AT4G16500.1 | 42.254 | 71 | 40 | 1 | 21 | 90 | 45 | 115 | 1.92e-11 | 56.2 |
Find 36 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGTAACTTCTTTCTCTAT+TGG | 0.232957 | 3_1:-37312298 | None:intergenic |
| ACTTCTTTCTCTATTGGATT+TGG | 0.246495 | 3_1:-37312292 | None:intergenic |
| GCAAGACTGTTCTGGTTTCC+TGG | 0.297008 | 3_1:-37312369 | None:intergenic |
| TGTTATGCAGAATGCACTTC+TGG | 0.324506 | 3_1:+37313749 | Msa0356960:intron |
| ATACACAAGGAGAGTGTTAT+AGG | 0.334954 | 3_1:-37315529 | None:intergenic |
| AAAAGATGGGATGAATAAAA+AGG | 0.350737 | 3_1:+37313842 | Msa0356960:CDS |
| CATCGATCGCAAGACTGTTC+TGG | 0.359811 | 3_1:-37312377 | None:intergenic |
| GGTGGAGTTCGCGATGTTCC+AGG | 0.367977 | 3_1:+37312351 | Msa0356960:CDS |
| CATACACCACATCACTTTAG+AGG | 0.393728 | 3_1:+37313818 | Msa0356960:CDS |
| CCTAAGGATCATGTTATGTA+TGG | 0.413712 | 3_1:+37315373 | Msa0356960:three_prime_UTR |
| GGTTTATGAAGCCAAGGTTT+GGG | 0.416419 | 3_1:+37313863 | Msa0356960:CDS |
| TTTGAAGTTGAATGTTGTCC+TGG | 0.419306 | 3_1:-37315574 | None:intergenic |
| AGGTTTATGAAGCCAAGGTT+TGG | 0.435602 | 3_1:+37313862 | Msa0356960:CDS |
| GCTAAAGAGCAAGTGGTTGC+TGG | 0.452937 | 3_1:+37313792 | Msa0356960:CDS |
| ATCACTTTAGAGGTAAAAGA+TGG | 0.458637 | 3_1:+37313828 | Msa0356960:CDS |
| CCAAGGTTTGGGAAAAGTCT+TGG | 0.461362 | 3_1:+37313874 | Msa0356960:CDS |
| AGCTAAGCGCTTTACTGCGC+AGG | 0.474659 | 3_1:-37313942 | None:intergenic |
| TTTCACCTTCGAGTCATGCT+GGG | 0.483377 | 3_1:-37315348 | None:intergenic |
| CCATACATAACATGATCCTT+AGG | 0.485466 | 3_1:-37315373 | None:intergenic |
| AAAGAGAAGGAGAAGAAGAA+TGG | 0.491222 | 3_1:+37312320 | Msa0356960:exon |
| CTCTAAAGTGATGTGGTGTA+TGG | 0.517466 | 3_1:-37313817 | None:intergenic |
| AAAGAAGTTACAGAAAGAGA+AGG | 0.532422 | 3_1:+37312307 | Msa0356960:five_prime_UTR |
| AAAGTCTTGGATGAACTTCA+AGG | 0.534205 | 3_1:+37313887 | Msa0356960:CDS |
| GCGCAGTAAAGCGCTTAGCT+AGG | 0.543427 | 3_1:+37313945 | Msa0356960:exon |
| AGAAGAATGGCAACGCTTGG+TGG | 0.543963 | 3_1:+37312333 | Msa0356960:exon |
| TTGAAGTTGAATGTTGTCCT+GGG | 0.564672 | 3_1:-37315573 | None:intergenic |
| AGAAGAAGAATGGCAACGCT+TGG | 0.566845 | 3_1:+37312330 | Msa0356960:exon |
| CAGAACAGTCTTGCGATCGA+TGG | 0.591248 | 3_1:+37312378 | Msa0356960:CDS |
| ACTCGAAGGTGAAAAGCCTA+AGG | 0.594199 | 3_1:+37315357 | Msa0356960:three_prime_UTR |
| ATGTGCCCAGCATGACTCGA+AGG | 0.621763 | 3_1:+37315343 | Msa0356960:three_prime_UTR |
| CTCGTGACAAGTAAAAGCAA+TGG | 0.629810 | 3_1:-37315408 | None:intergenic |
| GATAAGTGCTAAAGAGCAAG+TGG | 0.632798 | 3_1:+37313785 | Msa0356960:CDS |
| TCACTTTAGAGGTAAAAGAT+GGG | 0.635507 | 3_1:+37313829 | Msa0356960:CDS |
| ATGAGCATTATTGACAACCC+AGG | 0.716995 | 3_1:+37315556 | Msa0356960:three_prime_UTR |
| AATGCTCATACACATACACA+AGG | 0.720500 | 3_1:-37315542 | None:intergenic |
| GTCTTGGATGAACTTCAAGG+AGG | 0.758137 | 3_1:+37313890 | Msa0356960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAGTAAATATTCAATT+TGG | + | chr3_1:37312558-37312577 | Msa0356960:intron | 10.0% |
| !!! | TTTTGTCAAAAAAAAAAAAA+GGG | - | chr3_1:37312740-37312759 | None:intergenic | 10.0% |
| !!! | ATTTTGTCAAAAAAAAAAAA+AGG | - | chr3_1:37312741-37312760 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGACAAAATTA+CGG | + | chr3_1:37312743-37312762 | Msa0356960:intron | 10.0% |
| !!! | ATTTTAAAGAATATGATATA+AGG | - | chr3_1:37313147-37313166 | None:intergenic | 10.0% |
| !! | ACTTTATAAATATTTCAAAT+AGG | - | chr3_1:37313202-37313221 | None:intergenic | 10.0% |
| !!! | ATTTTAAGAAATACTAAAAT+TGG | + | chr3_1:37313454-37313473 | Msa0356960:intron | 10.0% |
| !! | AAATGAACAAAATAAATAAA+CGG | - | chr3_1:37313651-37313670 | None:intergenic | 10.0% |
| !!! | TTTTATCATTTTTATTTAGT+TGG | + | chr3_1:37313722-37313741 | Msa0356960:intron | 10.0% |
| !! | AAAATTTATCTTTCTTAATA+GGG | - | chr3_1:37314396-37314415 | None:intergenic | 10.0% |
| !! | TAAAATTTATCTTTCTTAAT+AGG | - | chr3_1:37314397-37314416 | None:intergenic | 10.0% |
| !!! | AAATTTTTCAGATTAAATTA+AGG | + | chr3_1:37314672-37314691 | Msa0356960:intron | 10.0% |
| !! | TTTGTCAAAAAAAAAAAAAG+GGG | - | chr3_1:37312739-37312758 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGACAAAATTAC+GGG | + | chr3_1:37312744-37312763 | Msa0356960:intron | 15.0% |
| !! | ATAATAAGTGGTTAAATATA+TGG | - | chr3_1:37313050-37313069 | None:intergenic | 15.0% |
| !! | TTGAAATATTTATAAAGTCA+AGG | + | chr3_1:37313204-37313223 | Msa0356960:intron | 15.0% |
| !!! | TCTCAAATTTTTTATTTGAA+AGG | + | chr3_1:37313348-37313367 | Msa0356960:intron | 15.0% |
| !!! | AAACTCATTTTTTTAATTCA+TGG | - | chr3_1:37314078-37314097 | None:intergenic | 15.0% |
| !! | AAATTTATCTTTCTTAATAG+GGG | - | chr3_1:37314395-37314414 | None:intergenic | 15.0% |
| !! | TCACAAAAGTTATTAAAAAT+TGG | + | chr3_1:37315698-37315717 | Msa0356960:three_prime_UTR | 15.0% |
| !! | CTAAAAAAATTACAAGATGA+AGG | - | chr3_1:37312545-37312564 | None:intergenic | 20.0% |
| !! | CTCTACATGATAAAAAAATT+GGG | - | chr3_1:37312606-37312625 | None:intergenic | 20.0% |
| !! | ACTCTACATGATAAAAAAAT+TGG | - | chr3_1:37312607-37312626 | None:intergenic | 20.0% |
| !! | TTGTCAAAAAAAAAAAAAGG+GGG | - | chr3_1:37312738-37312757 | None:intergenic | 20.0% |
| !! | TTAACAACTTACTCTTAATT+AGG | + | chr3_1:37313088-37313107 | Msa0356960:intron | 20.0% |
| !! | ATAGAAAGTGGATAAATTTA+AGG | - | chr3_1:37313115-37313134 | None:intergenic | 20.0% |
| !!! | AATACTAAAATTGGTTTTTG+AGG | + | chr3_1:37313463-37313482 | Msa0356960:intron | 20.0% |
| !!! | TGCAATTTTCTTTTGTTTTT+TGG | + | chr3_1:37313691-37313710 | Msa0356960:intron | 20.0% |
| !!! | AAAATGAGTTTTCAATGATT+AGG | + | chr3_1:37314087-37314106 | Msa0356960:intron | 20.0% |
| !! | TAGACATTTAGAAATCTTTA+TGG | + | chr3_1:37314609-37314628 | Msa0356960:intron | 20.0% |
| !! | AGACATTTAGAAATCTTTAT+GGG | + | chr3_1:37314610-37314629 | Msa0356960:intron | 20.0% |
| !! | AGAAAAAAGGTTGTATATTA+TGG | + | chr3_1:37314930-37314949 | Msa0356960:intron | 20.0% |
| !!! | AGATAGAATAATTGTGTTTT+TGG | + | chr3_1:37315147-37315166 | Msa0356960:intron | 20.0% |
| !! | AGTTGGATAAATTAACATAA+TGG | - | chr3_1:37315229-37315248 | None:intergenic | 20.0% |
| !! | TAATAATACCAATAATACCA+GGG | - | chr3_1:37315269-37315288 | None:intergenic | 20.0% |
| !! | TTAATAATACCAATAATACC+AGG | - | chr3_1:37315270-37315289 | None:intergenic | 20.0% |
| !!! | ATAACTAATTTTAGCTTCAA+TGG | + | chr3_1:37315481-37315500 | Msa0356960:three_prime_UTR | 20.0% |
| !!! | TAACTAATTTTAGCTTCAAT+GGG | + | chr3_1:37315482-37315501 | Msa0356960:three_prime_UTR | 20.0% |
| ! | TACAAAAATCATGCGTATTT+GGG | - | chr3_1:37312516-37312535 | None:intergenic | 25.0% |
| ! | ATACAAAAATCATGCGTATT+TGG | - | chr3_1:37312517-37312536 | None:intergenic | 25.0% |
| ! | TGTCAAAAAAAAAAAAAGGG+GGG | - | chr3_1:37312737-37312756 | None:intergenic | 25.0% |
| ! | AAAATAAGTAAAGACCCAAT+TGG | - | chr3_1:37312773-37312792 | None:intergenic | 25.0% |
| ! | GACAATGAATACTATATGAA+GGG | + | chr3_1:37312888-37312907 | Msa0356960:intron | 25.0% |
| ! | ACAATGAATACTATATGAAG+GGG | + | chr3_1:37312889-37312908 | Msa0356960:intron | 25.0% |
| ! | TTATGAGTAGTATGTCAAAA+CGG | + | chr3_1:37312995-37313014 | Msa0356960:intron | 25.0% |
| !! | GAGACTTAATTGATAATAAG+TGG | - | chr3_1:37313062-37313081 | None:intergenic | 25.0% |
| ! | TATCCACTTTCTATCAATTT+AGG | + | chr3_1:37313121-37313140 | Msa0356960:intron | 25.0% |
| ! | TGTATAAAGTTTACGATTTG+AGG | - | chr3_1:37313522-37313541 | None:intergenic | 25.0% |
| ! | ACAAAATAAATAAACGGCTT+TGG | - | chr3_1:37313645-37313664 | None:intergenic | 25.0% |
| ! | AAAAGATGGGATGAATAAAA+AGG | + | chr3_1:37313842-37313861 | Msa0356960:CDS | 25.0% |
| !!! | CCTGTTGTTTTAAATATGAA+GGG | + | chr3_1:37313997-37314016 | Msa0356960:intron | 25.0% |
| !!! | ATGTTACTTACTAGTTTTTG+TGG | + | chr3_1:37314051-37314070 | Msa0356960:intron | 25.0% |
| ! | GTGTGTAATTAGTTACTATT+TGG | + | chr3_1:37314253-37314272 | Msa0356960:intron | 25.0% |
| !! | TTAGTTACTATTTGGTGATT+AGG | + | chr3_1:37314261-37314280 | Msa0356960:intron | 25.0% |
| ! | AGAAAACATGAAATTTCTGT+AGG | + | chr3_1:37314453-37314472 | Msa0356960:intron | 25.0% |
| ! | GTATTTGTAGCATTAAGATA+GGG | + | chr3_1:37314475-37314494 | Msa0356960:intron | 25.0% |
| ! | TATTTGTAGCATTAAGATAG+GGG | + | chr3_1:37314476-37314495 | Msa0356960:intron | 25.0% |
| ! | GACATTTAGAAATCTTTATG+GGG | + | chr3_1:37314611-37314630 | Msa0356960:intron | 25.0% |
| ! | TTGTATAGCTGTTAAGTTAA+TGG | - | chr3_1:37314858-37314877 | None:intergenic | 25.0% |
| !! | GTCCAAAGAGTATAATATTA+TGG | + | chr3_1:37315016-37315035 | Msa0356960:intron | 25.0% |
| ! | CACCATAATATTATACTCTT+TGG | - | chr3_1:37315021-37315040 | None:intergenic | 25.0% |
| !! | CAAAGAGTATAATATTATGG+TGG | + | chr3_1:37315019-37315038 | Msa0356960:intron | 25.0% |
| !! | ATAATATTATGGTGGAGAAA+AGG | + | chr3_1:37315027-37315046 | Msa0356960:intron | 25.0% |
| ! | CAAAAGGTAGGTATTATTAT+TGG | + | chr3_1:37315085-37315104 | Msa0356960:intron | 25.0% |
| ! | TCTGAAAAGATAATGTTGAT+TGG | - | chr3_1:37315200-37315219 | None:intergenic | 25.0% |
| ACTTCTTTCTCTATTGGATT+TGG | - | chr3_1:37312295-37312314 | None:intergenic | 30.0% | |
| TCTGTAACTTCTTTCTCTAT+TGG | - | chr3_1:37312301-37312320 | None:intergenic | 30.0% | |
| AAAGAAGTTACAGAAAGAGA+AGG | + | chr3_1:37312307-37312326 | Msa0356960:five_prime_UTR | 30.0% | |
| TGAAGAACACAACAAAAAAC+AGG | + | chr3_1:37312419-37312438 | Msa0356960:CDS | 30.0% | |
| ATTTGGGAAAAAACGATCAT+CGG | - | chr3_1:37312500-37312519 | None:intergenic | 30.0% | |
| AATATCGAGAGCTATAATCA+AGG | + | chr3_1:37312697-37312716 | Msa0356960:intron | 30.0% | |
| ATATCGAGAGCTATAATCAA+GGG | + | chr3_1:37312698-37312717 | Msa0356960:intron | 30.0% | |
| CGACAATGAATACTATATGA+AGG | + | chr3_1:37312887-37312906 | Msa0356960:intron | 30.0% | |
| TGTCAAGTAACCTAATAAGT+GGG | - | chr3_1:37312937-37312956 | None:intergenic | 30.0% | |
| TTGTCAAGTAACCTAATAAG+TGG | - | chr3_1:37312938-37312957 | None:intergenic | 30.0% | |
| ACTTGACACTTTAATAGAGT+CGG | - | chr3_1:37313023-37313042 | None:intergenic | 30.0% | |
| ! | ACTCTATTAAAGTGTCAAGT+TGG | + | chr3_1:37313023-37313042 | Msa0356960:intron | 30.0% |
| ! | GATTAATTTGGTGGTTTACT+TGG | + | chr3_1:37313257-37313276 | Msa0356960:intron | 30.0% |
| TGGTTTACTTGGTAAACATT+TGG | + | chr3_1:37313268-37313287 | Msa0356960:intron | 30.0% | |
| ! | CATTTGTTGAATCTATCGAT+TGG | + | chr3_1:37313302-37313321 | Msa0356960:intron | 30.0% |
| ATGTTCCTTAAACAAGATCA+GGG | - | chr3_1:37313381-37313400 | None:intergenic | 30.0% | |
| AAAGAGTGAAGTTACATTCA+AGG | - | chr3_1:37313586-37313605 | None:intergenic | 30.0% | |
| TCTTTCAGTACTATATGACT+TGG | + | chr3_1:37313601-37313620 | Msa0356960:intron | 30.0% | |
| ! | ATCACTTTAGAGGTAAAAGA+TGG | + | chr3_1:37313828-37313847 | Msa0356960:CDS | 30.0% |
| ! | TCACTTTAGAGGTAAAAGAT+GGG | + | chr3_1:37313829-37313848 | Msa0356960:CDS | 30.0% |
| TAAAAAGGTTTATGAAGCCA+AGG | + | chr3_1:37313857-37313876 | Msa0356960:CDS | 30.0% | |
| ! | TCATATTTAAAACAACAGGC+AGG | - | chr3_1:37313996-37314015 | None:intergenic | 30.0% |
| !!! | GCCTGTTGTTTTAAATATGA+AGG | + | chr3_1:37313996-37314015 | Msa0356960:intron | 30.0% |
| ! | CCCTTCATATTTAAAACAAC+AGG | - | chr3_1:37314000-37314019 | None:intergenic | 30.0% |
| AAATAATCCCATGACTAAAC+CGG | - | chr3_1:37314141-37314160 | None:intergenic | 30.0% | |
| TTAGCGAAACAAGAACAAAA+TGG | + | chr3_1:37314220-37314239 | Msa0356960:intron | 30.0% | |
| TAGCGAAACAAGAACAAAAT+GGG | + | chr3_1:37314221-37314240 | Msa0356960:intron | 30.0% | |
| !! | AGAACAAAATGGGGTTTTAA+TGG | + | chr3_1:37314231-37314250 | Msa0356960:intron | 30.0% |
| GGTATTTGTAGCATTAAGAT+AGG | + | chr3_1:37314474-37314493 | Msa0356960:intron | 30.0% | |
| TGCTAAAGCATACTACTTAT+TGG | - | chr3_1:37314818-37314837 | None:intergenic | 30.0% | |
| TTCTGAACATAAGCTCATTT+GGG | - | chr3_1:37314914-37314933 | None:intergenic | 30.0% | |
| TTTCTGAACATAAGCTCATT+TGG | - | chr3_1:37314915-37314934 | None:intergenic | 30.0% | |
| TGAGCTTATGTTCAGAAAAA+AGG | + | chr3_1:37314917-37314936 | Msa0356960:intron | 30.0% | |
| AAAGGTTGTATATTATGGAG+AGG | + | chr3_1:37314935-37314954 | Msa0356960:intron | 30.0% | |
| AAAAAGAGAGTGAGAATAAC+TGG | + | chr3_1:37314968-37314987 | Msa0356960:intron | 30.0% | |
| TAAACATATGTTCCTGCAAA+AGG | + | chr3_1:37315069-37315088 | Msa0356960:intron | 30.0% | |
| ! | TAATAATACCTACCTTTTGC+AGG | - | chr3_1:37315084-37315103 | None:intergenic | 30.0% |
| AAGGTAGGTATTATTATTGG+TGG | + | chr3_1:37315088-37315107 | Msa0356960:intron | 30.0% | |
| TTTAGTCACCTGAAAAATCA+AGG | - | chr3_1:37315312-37315331 | None:intergenic | 30.0% | |
| AAAGAGAAGGAGAAGAAGAA+TGG | + | chr3_1:37312320-37312339 | Msa0356960:exon | 35.0% | |
| CACCTCTTAAAGTGAATAAG+TGG | + | chr3_1:37312641-37312660 | Msa0356960:intron | 35.0% | |
| CTCCACTTATTCACTTTAAG+AGG | - | chr3_1:37312646-37312665 | None:intergenic | 35.0% | |
| AAAATTACGGGAGACCAATT+GGG | + | chr3_1:37312756-37312775 | Msa0356960:intron | 35.0% | |
| GTCAAGTAACCTAATAAGTG+GGG | - | chr3_1:37312936-37312955 | None:intergenic | 35.0% | |
| ACATACTACTCATAACCTCA+AGG | - | chr3_1:37312990-37313009 | None:intergenic | 35.0% | |
| CTTGACACTTTAATAGAGTC+GGG | - | chr3_1:37313022-37313041 | None:intergenic | 35.0% | |
| AGGCCTAAATTGATAGAAAG+TGG | - | chr3_1:37313127-37313146 | None:intergenic | 35.0% | |
| ATTGCAGGACACTCTTAAAT+AGG | - | chr3_1:37313231-37313250 | None:intergenic | 35.0% | |
| AAATTAATCCCTGACATTGC+AGG | - | chr3_1:37313246-37313265 | None:intergenic | 35.0% | |
| TGCAATGTCAGGGATTAATT+TGG | + | chr3_1:37313245-37313264 | Msa0356960:intron | 35.0% | |
| ! | AATGTCAGGGATTAATTTGG+TGG | + | chr3_1:37313248-37313267 | Msa0356960:intron | 35.0% |
| AATTTGAGAGATCTCACTGA+AGG | - | chr3_1:37313337-37313356 | None:intergenic | 35.0% | |
| TGTTCCTTAAACAAGATCAG+GGG | - | chr3_1:37313380-37313399 | None:intergenic | 35.0% | |
| CATGTTCCTTAAACAAGATC+AGG | - | chr3_1:37313382-37313401 | None:intergenic | 35.0% | |
| ACTGCTAGATTCATACTAAG+AGG | + | chr3_1:37313560-37313579 | Msa0356960:intron | 35.0% | |
| !!! | AAATAAACGGCTTTGGCTTT+TGG | - | chr3_1:37313638-37313657 | None:intergenic | 35.0% |
| !!! | ATGCACTTCTGGAATTTTCA+AGG | + | chr3_1:37313760-37313779 | Msa0356960:CDS | 35.0% |
| !!! | TGCACTTCTGGAATTTTCAA+GGG | + | chr3_1:37313761-37313780 | Msa0356960:CDS | 35.0% |
| !!! | CTTTTACCTCTAAAGTGATG+TGG | - | chr3_1:37313827-37313846 | None:intergenic | 35.0% |
| AAAGTCTTGGATGAACTTCA+AGG | + | chr3_1:37313887-37313906 | Msa0356960:CDS | 35.0% | |
| ! | TGATGTTTGAGATCAGTTTC+CGG | + | chr3_1:37314119-37314138 | Msa0356960:intron | 35.0% |
| TTCGCTAAAGAACGACAAAA+TGG | - | chr3_1:37314208-37314227 | None:intergenic | 35.0% | |
| AGCGAAACAAGAACAAAATG+GGG | + | chr3_1:37314222-37314241 | Msa0356960:intron | 35.0% | |
| CAAGAATAAGTGTTTGCTCA+TGG | + | chr3_1:37314300-37314319 | Msa0356960:intron | 35.0% | |
| ATGGTTGCTACAAAATGTAC+AGG | + | chr3_1:37314319-37314338 | Msa0356960:intron | 35.0% | |
| TGCGTGAACTTTATAGCATT+TGG | + | chr3_1:37314421-37314440 | Msa0356960:intron | 35.0% | |
| !! | ACAATACCTCAGTTCTGAAA+AGG | - | chr3_1:37314533-37314552 | None:intergenic | 35.0% |
| TCTCACAACAAGATCATGTT+TGG | - | chr3_1:37314560-37314579 | None:intergenic | 35.0% | |
| CTTTATGGGGTTTACGTATT+TGG | + | chr3_1:37314624-37314643 | Msa0356960:intron | 35.0% | |
| GACATTTGCAATGTTTCTCT+TGG | + | chr3_1:37314728-37314747 | Msa0356960:intron | 35.0% | |
| CTTGATACTAGCATGAATAC+AGG | - | chr3_1:37314786-37314805 | None:intergenic | 35.0% | |
| CTGTATTCATGCTAGTATCA+AGG | + | chr3_1:37314784-37314803 | Msa0356960:intron | 35.0% | |
| ! | TACTTCTGCCTTGATTTTTC+AGG | + | chr3_1:37315301-37315320 | Msa0356960:intron | 35.0% |
| CCATACATAACATGATCCTT+AGG | - | chr3_1:37315376-37315395 | None:intergenic | 35.0% | |
| CCTAAGGATCATGTTATGTA+TGG | + | chr3_1:37315373-37315392 | Msa0356960:three_prime_UTR | 35.0% | |
| !! | ATACACAAGGAGAGTGTTAT+AGG | - | chr3_1:37315532-37315551 | None:intergenic | 35.0% |
| AATGCTCATACACATACACA+AGG | - | chr3_1:37315545-37315564 | None:intergenic | 35.0% | |
| TTGAAGTTGAATGTTGTCCT+GGG | - | chr3_1:37315576-37315595 | None:intergenic | 35.0% | |
| ! | TTTGAAGTTGAATGTTGTCC+TGG | - | chr3_1:37315577-37315596 | None:intergenic | 35.0% |
| CAAAATTACGGGAGACCAAT+TGG | + | chr3_1:37312755-37312774 | Msa0356960:intron | 40.0% | |
| ACCAACTGAGCTAAACTCAT+GGG | - | chr3_1:37312857-37312876 | None:intergenic | 40.0% | |
| TACCAACTGAGCTAAACTCA+TGG | - | chr3_1:37312858-37312877 | None:intergenic | 40.0% | |
| ! | TGAGTTTAGCTCAGTTGGTA+TGG | + | chr3_1:37312858-37312877 | Msa0356960:intron | 40.0% |
| AATACTATATGAAGGGGCTG+AGG | + | chr3_1:37312895-37312914 | Msa0356960:intron | 40.0% | |
| ACTTTGACACCCCACTTATT+AGG | + | chr3_1:37312924-37312943 | Msa0356960:intron | 40.0% | |
| ATAACCTCAAGGACCTACTT+CGG | - | chr3_1:37312979-37312998 | None:intergenic | 40.0% | |
| !! | GAATCTATCGATTGGTCTAG+AGG | + | chr3_1:37313310-37313329 | Msa0356960:intron | 40.0% |
| ! | TGAACCCCTGATCTTGTTTA+AGG | + | chr3_1:37313373-37313392 | Msa0356960:intron | 40.0% |
| ! | GAACATGAGTCTAGTTCCAT+TGG | + | chr3_1:37313395-37313414 | Msa0356960:intron | 40.0% |
| AACACTGCATTGTGTTCCAA+TGG | - | chr3_1:37313414-37313433 | None:intergenic | 40.0% | |
| ATTGGAACACAATGCAGTGT+TGG | + | chr3_1:37313413-37313432 | Msa0356960:intron | 40.0% | |
| !!! | CTTTGGCTTTTGGTAAGAGA+CGG | - | chr3_1:37313628-37313647 | None:intergenic | 40.0% |
| TGTTATGCAGAATGCACTTC+TGG | + | chr3_1:37313749-37313768 | Msa0356960:intron | 40.0% | |
| GATAAGTGCTAAAGAGCAAG+TGG | + | chr3_1:37313785-37313804 | Msa0356960:CDS | 40.0% | |
| !! | CTCTAAAGTGATGTGGTGTA+TGG | - | chr3_1:37313820-37313839 | None:intergenic | 40.0% |
| CATACACCACATCACTTTAG+AGG | + | chr3_1:37313818-37313837 | Msa0356960:CDS | 40.0% | |
| AGGTTTATGAAGCCAAGGTT+TGG | + | chr3_1:37313862-37313881 | Msa0356960:CDS | 40.0% | |
| GGTTTATGAAGCCAAGGTTT+GGG | + | chr3_1:37313863-37313882 | Msa0356960:CDS | 40.0% | |
| ATCAGTTTCCGGTTTAGTCA+TGG | + | chr3_1:37314130-37314149 | Msa0356960:intron | 40.0% | |
| TCAGTTTCCGGTTTAGTCAT+GGG | + | chr3_1:37314131-37314150 | Msa0356960:intron | 40.0% | |
| TTCTTTGCTTGTCCTGTATC+AGG | + | chr3_1:37314752-37314771 | Msa0356960:intron | 40.0% | |
| ATAAGCTCATTTGGGAAGGA+TGG | - | chr3_1:37314906-37314925 | None:intergenic | 40.0% | |
| GAACATAAGCTCATTTGGGA+AGG | - | chr3_1:37314910-37314929 | None:intergenic | 40.0% | |
| CATATGTTCCTGCAAAAGGT+AGG | + | chr3_1:37315073-37315092 | Msa0356960:intron | 40.0% | |
| GTGGAGAGAAAAGAGAGTAA+AGG | + | chr3_1:37315107-37315126 | Msa0356960:intron | 40.0% | |
| ACGTATGATGCATGTCAAGT+TGG | - | chr3_1:37315246-37315265 | None:intergenic | 40.0% | |
| TCATACGTCCCTGGTATTAT+TGG | + | chr3_1:37315258-37315277 | Msa0356960:intron | 40.0% | |
| CTCGTGACAAGTAAAAGCAA+TGG | - | chr3_1:37315411-37315430 | None:intergenic | 40.0% | |
| ! | CTTTTACTTGTCACGAGTGT+TGG | + | chr3_1:37315414-37315433 | Msa0356960:three_prime_UTR | 40.0% |
| ATGAGCATTATTGACAACCC+AGG | + | chr3_1:37315556-37315575 | Msa0356960:three_prime_UTR | 40.0% | |
| AGAAGAAGAATGGCAACGCT+TGG | + | chr3_1:37312330-37312349 | Msa0356960:exon | 45.0% | |
| CCAACTGAGCTAAACTCATG+GGG | - | chr3_1:37312856-37312875 | None:intergenic | 45.0% | |
| !! | ATTGAGTTGACCTCCGAAGT+AGG | + | chr3_1:37312963-37312982 | Msa0356960:intron | 45.0% |
| !! | TAAGAGTGTCCTGCAATGTC+AGG | + | chr3_1:37313234-37313253 | Msa0356960:intron | 45.0% |
| !! | AAGAGTGTCCTGCAATGTCA+GGG | + | chr3_1:37313235-37313254 | Msa0356960:intron | 45.0% |
| !! | GAACACAATGCAGTGTTGGT+TGG | + | chr3_1:37313417-37313436 | Msa0356960:intron | 45.0% |
| ! | CCAAGACTTTTCCCAAACCT+TGG | - | chr3_1:37313877-37313896 | None:intergenic | 45.0% |
| CCAAGGTTTGGGAAAAGTCT+TGG | + | chr3_1:37313874-37313893 | Msa0356960:CDS | 45.0% | |
| GTCTTGGATGAACTTCAAGG+AGG | + | chr3_1:37313890-37313909 | Msa0356960:CDS | 45.0% | |
| AGCATTAAGATAGGGGAGAG+TGG | + | chr3_1:37314483-37314502 | Msa0356960:intron | 45.0% | |
| !! | TCAGTTCTGAAAAGGTGCAG+AGG | - | chr3_1:37314525-37314544 | None:intergenic | 45.0% |
| ! | TCTGCACCTTTTCAGAACTG+AGG | + | chr3_1:37314524-37314543 | Msa0356960:intron | 45.0% |
| CAGGATACAGATCCTGATAC+AGG | - | chr3_1:37314767-37314786 | None:intergenic | 45.0% | |
| TTTCACCTTCGAGTCATGCT+GGG | - | chr3_1:37315351-37315370 | None:intergenic | 45.0% | |
| ! | TTTTCACCTTCGAGTCATGC+TGG | - | chr3_1:37315352-37315371 | None:intergenic | 45.0% |
| ACTCGAAGGTGAAAAGCCTA+AGG | + | chr3_1:37315357-37315376 | Msa0356960:three_prime_UTR | 45.0% | |
| !!! | TTTTAATTTTTGATTTTTTT+AGG | + | chr3_1:37312792-37312811 | Msa0356960:intron | 5.0% |
| !!! | TTTAATTTTTGATTTTTTTA+GGG | + | chr3_1:37312793-37312812 | Msa0356960:intron | 5.0% |
| AGAAGAATGGCAACGCTTGG+TGG | + | chr3_1:37312333-37312352 | Msa0356960:exon | 50.0% | |
| !! | GCAAGACTGTTCTGGTTTCC+TGG | - | chr3_1:37312372-37312391 | None:intergenic | 50.0% |
| CATCGATCGCAAGACTGTTC+TGG | - | chr3_1:37312380-37312399 | None:intergenic | 50.0% | |
| CAGAACAGTCTTGCGATCGA+TGG | + | chr3_1:37312378-37312397 | Msa0356960:CDS | 50.0% | |
| CTGAGCTAAACTCATGGGGA+TGG | - | chr3_1:37312852-37312871 | None:intergenic | 50.0% | |
| ! | CCCCATGAGTTTAGCTCAGT+TGG | + | chr3_1:37312853-37312872 | Msa0356960:intron | 50.0% |
| GCTAAAGAGCAAGTGGTTGC+TGG | + | chr3_1:37313792-37313811 | Msa0356960:CDS | 50.0% | |
| TGACATGCATCATACGTCCC+TGG | + | chr3_1:37315249-37315268 | Msa0356960:intron | 50.0% | |
| ACCTCCGAAGTAGGTCCTTG+AGG | + | chr3_1:37312972-37312991 | Msa0356960:intron | 55.0% | |
| ACCTCAAGGACCTACTTCGG+AGG | - | chr3_1:37312976-37312995 | None:intergenic | 55.0% | |
| AGCTAAGCGCTTTACTGCGC+AGG | - | chr3_1:37313945-37313964 | None:intergenic | 55.0% | |
| ! | GCGCAGTAAAGCGCTTAGCT+AGG | + | chr3_1:37313945-37313964 | Msa0356960:exon | 55.0% |
| ATGTGCCCAGCATGACTCGA+AGG | + | chr3_1:37315343-37315362 | Msa0356960:three_prime_UTR | 55.0% | |
| GGTGGAGTTCGCGATGTTCC+AGG | + | chr3_1:37312351-37312370 | Msa0356960:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 37312278 | 37315751 | 37312278 | ID=Msa0356960;Name=Msa0356960 |
| chr3_1 | mRNA | 37312278 | 37315751 | 37312278 | ID=Msa0356960-mRNA-1;Parent=Msa0356960;Name=Msa0356960-mRNA-1;_AED=0.02;_eAED=0.02;_QI=61|1|1|1|0.5|0.33|3|442|98 |
| chr3_1 | exon | 37312278 | 37312440 | 37312278 | ID=Msa0356960-mRNA-1:exon:6815;Parent=Msa0356960-mRNA-1 |
| chr3_1 | exon | 37313759 | 37313966 | 37313759 | ID=Msa0356960-mRNA-1:exon:6816;Parent=Msa0356960-mRNA-1 |
| chr3_1 | exon | 37315323 | 37315751 | 37315323 | ID=Msa0356960-mRNA-1:exon:6817;Parent=Msa0356960-mRNA-1 |
| chr3_1 | five_prime_UTR | 37312278 | 37312338 | 37312278 | ID=Msa0356960-mRNA-1:five_prime_utr;Parent=Msa0356960-mRNA-1 |
| chr3_1 | CDS | 37312339 | 37312440 | 37312339 | ID=Msa0356960-mRNA-1:cds;Parent=Msa0356960-mRNA-1 |
| chr3_1 | CDS | 37313759 | 37313953 | 37313759 | ID=Msa0356960-mRNA-1:cds;Parent=Msa0356960-mRNA-1 |
| chr3_1 | three_prime_UTR | 37313954 | 37313966 | 37313954 | ID=Msa0356960-mRNA-1:three_prime_utr;Parent=Msa0356960-mRNA-1 |
| chr3_1 | three_prime_UTR | 37315323 | 37315751 | 37315323 | ID=Msa0356960-mRNA-1:three_prime_utr;Parent=Msa0356960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
