AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1417210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1417210 MtrunA17_Chr5g0404741 98.137 322 6 0 1 322 252 573 0.0 656
Msa1417210 MtrunA17_Chr2g0299001 45.918 294 138 5 4 277 256 548 3.46e-71 237
Msa1417210 MtrunA17_Chr4g0037421 43.617 282 156 3 4 284 317 596 9.17e-68 228
Msa1417210 MtrunA17_Chr1g0151481 39.871 311 175 6 1 301 265 573 2.67e-66 224
Msa1417210 MtrunA17_Chr3g0101321 41.639 305 169 6 4 301 258 560 2.14e-65 221
Msa1417210 MtrunA17_Chr3g0112511 40.777 309 173 6 3 303 255 561 5.63e-65 220
Msa1417210 MtrunA17_Chr7g0219851 43.446 267 137 4 4 257 250 515 4.42e-64 218
Msa1417210 MtrunA17_Chr1g0189351 38.387 310 181 6 4 305 262 569 2.57e-61 210
Msa1417210 MtrunA17_Chr5g0410031 40.278 288 156 6 1 278 251 532 1.72e-60 207
Msa1417210 MtrunA17_Chr5g0410001 38.941 321 179 7 1 310 250 564 2.66e-60 207
Msa1417210 MtrunA17_Chr3g0101331 38.312 308 173 7 9 301 272 577 3.57e-59 204
Msa1417210 MtrunA17_Chr3g0100681 36.824 296 152 4 3 292 77 343 3.77e-58 196
Msa1417210 MtrunA17_Chr3g0101181 38.851 296 165 4 3 283 273 567 5.51e-58 201
Msa1417210 MtrunA17_Chr3g0101221 38.000 300 179 5 4 298 269 566 8.86e-58 200
Msa1417210 MtrunA17_Chr5g0410021 40.065 307 175 6 1 300 246 550 1.05e-57 200
Msa1417210 MtrunA17_Chr3g0100831 38.111 307 177 6 1 300 262 562 3.64e-57 198
Msa1417210 MtrunA17_Chr3g0080791 39.161 286 166 4 1 279 264 548 5.52e-57 198
Msa1417210 MtrunA17_Chr3g0081341 38.246 285 167 5 1 277 327 610 8.02e-57 197
Msa1417210 MtrunA17_Chr3g0101011 35.172 290 177 4 1 279 273 562 3.32e-56 196
Msa1417210 MtrunA17_Chr3g0101211 38.007 271 165 2 3 270 55 325 3.53e-56 187
Msa1417210 MtrunA17_Chr3g0100971 37.217 309 182 6 1 300 259 564 4.27e-56 193
Msa1417210 MtrunA17_Chr3g0100731 36.774 310 184 6 3 303 19 325 8.01e-56 192
Msa1417210 MtrunA17_Chr3g0084351 38.596 285 166 5 1 277 189 472 8.71e-56 190
Msa1417210 MtrunA17_Chr3g0100961 37.578 322 188 6 1 311 262 581 9.19e-56 194
Msa1417210 MtrunA17_Chr5g0409991 38.870 301 176 6 4 300 252 548 1.53e-55 194
Msa1417210 MtrunA17_Chr3g0101271 39.427 279 164 4 3 277 242 519 1.53e-55 193
Msa1417210 MtrunA17_Chr3g0101241 39.427 279 164 4 3 277 242 519 1.64e-55 193
Msa1417210 MtrunA17_Chr3g0081361 37.943 282 168 4 3 279 274 553 2.08e-55 194
Msa1417210 MtrunA17_Chr3g0101231 39.068 279 168 2 1 277 272 550 2.39e-55 193
Msa1417210 MtrunA17_Chr3g0100801 38.610 259 150 3 3 258 229 481 2.98e-55 192
Msa1417210 MtrunA17_Chr5g0409971 37.582 306 177 6 4 300 253 553 6.46e-55 192
Msa1417210 MtrunA17_Chr3g0081391 39.437 284 161 6 3 277 265 546 6.75e-55 192
Msa1417210 MtrunA17_Chr3g0080771 38.434 281 165 4 6 279 269 548 8.97e-55 192
Msa1417210 MtrunA17_Chr3g0100851 36.334 311 177 7 9 312 160 456 9.74e-55 191
Msa1417210 MtrunA17_Chr3g0100761 36.570 309 184 6 1 300 219 524 1.06e-54 189
Msa1417210 MtrunA17_Chr3g0080731 37.282 287 173 4 1 280 264 550 1.16e-54 191
Msa1417210 MtrunA17_Chr3g0094301 38.947 285 165 5 1 277 264 547 1.23e-54 191
Msa1417210 MtrunA17_Chr7g0229761 38.947 285 165 5 1 277 264 547 1.23e-54 191
Msa1417210 MtrunA17_Chr3g0101201 39.683 252 149 2 9 257 272 523 2.62e-54 190
Msa1417210 MtrunA17_Chr3g0081371 38.710 279 165 3 3 277 274 550 3.75e-54 190
Msa1417210 MtrunA17_Chr3g0080601 38.380 284 168 4 1 277 263 546 3.84e-54 190
Msa1417210 MtrunA17_Chr1g0189271 42.222 225 121 4 1 219 102 323 6.10e-54 179
Msa1417210 MtrunA17_Chr3g0081191 36.879 282 171 4 3 279 265 544 8.70e-52 183
Msa1417210 MtrunA17_Chr3g0080741 36.170 282 173 4 3 277 268 549 4.40e-50 178
Msa1417210 MtrunA17_Chr3g0080721 35.714 280 172 4 1 274 2 279 4.71e-50 176
Msa1417210 MtrunA17_Chr3g0081211 36.491 285 172 5 1 277 262 545 7.83e-50 177
Msa1417210 MtrunA17_Chr3g0081181 36.842 285 170 5 1 279 252 532 9.73e-50 177
Msa1417210 MtrunA17_Chr3g0080751 37.809 283 168 5 3 277 266 548 5.45e-49 175
Msa1417210 MtrunA17_Chr3g0101391 38.326 227 133 4 58 277 1 227 4.07e-44 159
Msa1417210 MtrunA17_Chr3g0101251 39.744 234 135 5 71 301 299 529 7.61e-42 154
Msa1417210 MtrunA17_Chr3g0082311 36.475 244 145 6 12 250 266 504 1.49e-40 151
Msa1417210 MtrunA17_Chr3g0078361 36.777 242 144 7 12 249 82 318 3.00e-40 146
Msa1417210 MtrunA17_Chr3g0082131 39.095 243 138 6 12 250 265 501 1.33e-39 148
Msa1417210 MtrunA17_Chr8g0338671 33.452 281 174 7 2 275 135 409 1.62e-39 146
Msa1417210 MtrunA17_Chr8g0337891 36.032 247 152 5 7 249 256 500 2.01e-39 147
Msa1417210 MtrunA17_Chr3g0082101 38.430 242 139 7 12 249 270 505 3.35e-39 147
Msa1417210 MtrunA17_Chr1g0164611 38.430 242 139 7 12 249 270 505 4.37e-39 147
Msa1417210 MtrunA17_Chr1g0164391 35.391 243 147 6 12 249 266 503 2.08e-38 145
Msa1417210 MtrunA17_Chr3g0080651 39.810 211 118 5 72 277 257 463 5.45e-38 143
Msa1417210 MtrunA17_Chr3g0085561 37.295 244 146 4 8 248 232 471 1.63e-37 142
Msa1417210 MtrunA17_Chr1g0164581 39.095 243 138 6 12 250 241 477 1.79e-37 142
Msa1417210 MtrunA17_Chr6g0475491 33.984 256 158 6 1 249 253 504 2.25e-37 141
Msa1417210 MtrunA17_Chr3g0087701 36.032 247 151 6 12 254 251 494 2.88e-37 141
Msa1417210 MtrunA17_Chr3g0082391 35.950 242 146 7 12 249 267 503 5.58e-37 140
Msa1417210 MtrunA17_Chr3g0085451 38.710 217 126 4 7 220 234 446 7.05e-37 140
Msa1417210 MtrunA17_Chr8g0338681 38.426 216 127 4 2 213 29 242 8.65e-37 132
Msa1417210 MtrunA17_Chr7g0221481 35.273 275 164 9 7 275 248 514 2.07e-36 139
Msa1417210 MtrunA17_Chr3g0080631 31.818 286 147 4 1 281 264 506 2.60e-36 139
Msa1417210 MtrunA17_Chr1g0164631 36.777 242 143 7 12 249 274 509 2.95e-36 138
Msa1417210 MtrunA17_Chr8g0338361 33.597 253 161 5 2 249 117 367 3.04e-36 136
Msa1417210 MtrunA17_Chr3g0085501 35.918 245 150 4 7 248 262 502 4.39e-36 138
Msa1417210 MtrunA17_Chr3g0090651 36.014 286 159 13 12 288 266 536 5.18e-36 137
Msa1417210 MtrunA17_Chr3g0087581 35.897 273 159 8 9 275 249 511 9.95e-36 137
Msa1417210 MtrunA17_Chr3g0082871 35.294 255 158 5 7 256 245 497 1.07e-35 136
Msa1417210 MtrunA17_Chr5g0414311 34.400 250 159 4 7 254 261 507 2.26e-35 136
Msa1417210 MtrunA17_Chr3g0085331 36.066 244 149 4 8 248 263 502 2.39e-35 136
Msa1417210 MtrunA17_Chr3g0089871 34.532 278 165 8 17 288 270 536 2.40e-35 136
Msa1417210 MtrunA17_Chr3g0090431 35.192 287 159 12 12 287 138 408 2.56e-35 135
Msa1417210 MtrunA17_Chr3g0086181 34.416 308 180 12 9 304 246 543 2.70e-35 135
Msa1417210 MtrunA17_Chr3g0082811 33.333 276 174 6 7 274 245 518 2.76e-35 135
Msa1417210 MtrunA17_Chr8g0355411 32.847 274 158 7 17 275 263 525 2.90e-35 135
Msa1417210 MtrunA17_Chr3g0090691 35.563 284 163 11 12 288 266 536 2.91e-35 135
Msa1417210 MtrunA17_Chr3g0086091 34.426 305 178 11 12 304 60 354 3.45e-35 135
Msa1417210 MtrunA17_Chr3g0082891 34.532 278 173 6 7 279 245 518 3.45e-35 135
Msa1417210 MtrunA17_Chr3g0086161 33.871 310 183 12 7 304 244 543 4.49e-35 135
Msa1417210 MtrunA17_Chr3g0086151 36.905 252 147 8 9 254 246 491 4.65e-35 135
Msa1417210 MtrunA17_Chr3g0090141 34.043 282 165 11 12 285 266 534 5.46e-35 135
Msa1417210 MtrunA17_Chr3g0087731 35.968 253 147 6 9 254 57 301 5.83e-35 134
Msa1417210 MtrunA17_Chr3g0082881 34.902 255 159 5 7 256 245 497 6.33e-35 134
Msa1417210 MtrunA17_Chr5g0415511 35.968 253 151 5 7 254 257 503 6.53e-35 134
Msa1417210 MtrunA17_Chr7g0218941 34.524 252 153 5 2 249 253 496 1.18e-34 134
Msa1417210 MtrunA17_Chr3g0082351 35.950 242 146 7 12 249 265 501 1.36e-34 134
Msa1417210 MtrunA17_Chr8g0346831 31.429 315 195 9 2 306 253 556 1.61e-34 133
Msa1417210 MtrunA17_Chr8g0352831 36.777 242 142 6 12 248 276 511 2.61e-34 133
Msa1417210 MtrunA17_Chr3g0085801 40.206 194 112 3 9 199 266 458 2.66e-34 133
Msa1417210 MtrunA17_Chr1g0197241 33.016 315 182 9 6 308 882 1179 2.93e-34 133
Msa1417210 MtrunA17_Chr3g0091081 35.211 284 164 11 12 288 266 536 3.16e-34 132
Msa1417210 MtrunA17_Chr3g0087841 34.843 287 160 12 12 287 266 536 3.68e-34 132
Msa1417210 MtrunA17_Chr3g0091061 35.439 285 162 12 12 288 266 536 3.82e-34 132
Msa1417210 MtrunA17_Chr2g0316291 34.322 236 150 4 17 248 271 505 4.29e-34 132
Msa1417210 MtrunA17_Chr3g0084051 37.344 241 138 7 20 254 275 508 4.74e-34 132
Msa1417210 MtrunA17_Chr6g0471941 34.008 247 157 5 7 249 256 500 5.92e-34 132
Msa1417210 MtrunA17_Chr8g0338251 33.871 248 157 5 7 249 243 488 5.93e-34 131
Msa1417210 MtrunA17_Chr5g0417251 31.915 282 186 5 7 286 22 299 1.06e-33 130
Msa1417210 MtrunA17_Chr3g0092241 37.500 240 136 8 17 249 271 503 1.06e-33 131
Msa1417210 MtrunA17_Chr8g0338391 32.389 247 161 5 7 249 255 499 1.28e-33 130
Msa1417210 MtrunA17_Chr6g0470011 33.813 278 172 7 7 280 246 515 1.49e-33 130
Msa1417210 MtrunA17_Chr3g0085471 35.833 240 148 5 20 254 275 513 1.58e-33 130
Msa1417210 MtrunA17_Chr4g0025391 37.551 245 138 9 17 253 270 507 1.80e-33 130
Msa1417210 MtrunA17_Chr3g0084971 34.836 244 148 6 19 257 263 500 2.01e-33 130
Msa1417210 MtrunA17_Chr3g0089911 38.235 238 133 8 19 249 272 502 2.46e-33 129
Msa1417210 MtrunA17_Chr5g0415471 30.744 309 178 7 7 309 259 537 2.70e-33 130
Msa1417210 MtrunA17_Chr6g0470081 35.178 253 156 6 7 255 246 494 2.87e-33 130
Msa1417210 MtrunA17_Chr8g0338261 34.400 250 153 6 7 249 257 502 4.10e-33 129
Msa1417210 MtrunA17_Chr5g0413811 32.800 250 162 5 7 254 33 278 4.50e-33 129
Msa1417210 MtrunA17_Chr3g0090371 34.043 282 165 11 12 285 266 534 5.25e-33 129
Msa1417210 MtrunA17_Chr3g0086221 32.907 313 188 12 7 307 243 545 6.02e-33 129
Msa1417210 MtrunA17_Chr5g0446611 32.323 297 182 9 17 304 272 558 7.30e-33 128
Msa1417210 MtrunA17_Chr5g0414231 34.426 244 153 6 7 247 257 496 7.44e-33 127
Msa1417210 MtrunA17_Chr3g0087541 36.179 246 148 5 9 248 264 506 8.20e-33 128
Msa1417210 MtrunA17_Chr3g0089591 39.095 243 133 9 19 253 278 513 8.66e-33 128
Msa1417210 MtrunA17_Chr1g0149071 29.283 321 148 7 4 319 33 279 1.06e-32 126
Msa1417210 MtrunA17_Chr3g0090401 34.043 282 165 11 12 285 477 745 1.43e-32 128
Msa1417210 MtrunA17_Chr6g0467911 32.509 283 180 8 7 285 246 521 1.48e-32 127
Msa1417210 MtrunA17_Chr2g0309721 36.626 243 139 9 19 253 273 508 1.48e-32 127
Msa1417210 MtrunA17_Chr4g0020501 38.333 240 133 7 12 243 220 452 1.96e-32 127
Msa1417210 MtrunA17_Chr3g0096971 37.714 175 103 3 4 172 1 175 2.09e-32 118
Msa1417210 MtrunA17_Chr7g0257221 32.491 277 166 9 8 275 278 542 2.33e-32 127
Msa1417210 MtrunA17_Chr8g0344071 36.864 236 135 5 17 247 540 766 2.42e-32 127
Msa1417210 MtrunA17_Chr6g0470021 34.783 253 157 6 7 255 137 385 2.76e-32 127
Msa1417210 MtrunA17_Chr3g0084031 34.528 307 179 12 12 308 269 563 3.69e-32 126
Msa1417210 MtrunA17_Chr3g0089471 34.982 283 162 11 19 293 274 542 4.50e-32 126
Msa1417210 MtrunA17_Chr3g0091041 34.643 280 156 13 12 288 266 521 5.65e-32 124
Msa1417210 MtrunA17_Chr3g0085651 32.803 314 188 13 7 307 253 556 7.04e-32 125
Msa1417210 MtrunA17_Chr3g0089541 33.770 305 177 12 13 305 271 562 7.48e-32 125
Msa1417210 MtrunA17_Chr8g0352211 33.333 252 162 5 2 249 1249 1498 8.75e-32 125
Msa1417210 MtrunA17_Chr3g0092261 36.975 238 136 8 19 249 317 547 9.47e-32 125
Msa1417210 MtrunA17_Chr5g0431051 32.180 289 177 6 1 275 235 518 1.06e-31 125
Msa1417210 MtrunA17_Chr5g0430721 32.000 275 170 7 12 275 290 558 1.42e-31 125
Msa1417210 MtrunA17_Chr6g0456131 32.090 268 168 7 2 257 242 507 1.73e-31 124
Msa1417210 MtrunA17_Chr6g0468451 30.961 281 181 7 1 277 240 511 1.99e-31 124
Msa1417210 MtrunA17_Chr8g0338621 33.603 247 156 6 2 243 253 496 2.59e-31 124
Msa1417210 MtrunA17_Chr4g0009781 32.453 265 162 9 1 257 247 502 2.63e-31 124
Msa1417210 MtrunA17_Chr1g0169951 33.333 258 156 8 8 257 276 525 2.99e-31 124
Msa1417210 MtrunA17_Chr3g0085091 35.833 240 146 7 20 254 263 499 4.17e-31 123
Msa1417210 MtrunA17_Chr3g0082321 37.912 182 106 5 71 250 274 450 4.18e-31 123
Msa1417210 MtrunA17_Chr5g0430951 33.220 295 173 10 1 279 235 521 6.18e-31 123
Msa1417210 MtrunA17_Chr3g0123111 33.813 278 172 8 7 280 245 514 1.13e-30 122
Msa1417210 MtrunA17_Chr5g0414201 32.753 287 183 7 7 291 257 535 1.15e-30 122
Msa1417210 MtrunA17_Chr6g0468101 34.553 246 153 6 7 248 245 486 1.17e-30 122
Msa1417210 MtrunA17_Chr1g0189551 32.677 254 163 6 7 256 287 536 1.20e-30 122
Msa1417210 MtrunA17_Chr3g0089421 33.469 245 152 7 12 249 265 505 1.24e-30 122
Msa1417210 MtrunA17_Chr3g0089931 35.178 253 149 9 12 256 251 496 1.32e-30 121
Msa1417210 MtrunA17_Chr3g0082791 36.255 251 138 8 9 248 264 503 1.32e-30 122
Msa1417210 MtrunA17_Chr6g0468021 30.000 310 192 9 1 295 240 539 1.39e-30 122
Msa1417210 MtrunA17_Chr4g0010261 32.794 247 158 5 7 248 248 491 2.33e-30 121
Msa1417210 MtrunA17_Chr8g0352861 34.701 268 163 7 12 275 273 532 4.01e-30 120
Msa1417210 MtrunA17_Chr7g0248531 35.943 281 162 12 17 286 259 532 4.16e-30 120
Msa1417210 MtrunA17_Chr7g0257201 32.155 283 159 12 8 275 278 542 4.27e-30 120
Msa1417210 MtrunA17_Chr3g0089961 33.061 245 153 7 12 249 266 506 4.86e-30 120
Msa1417210 MtrunA17_Chr3g0086621 32.727 275 171 9 7 275 244 510 5.00e-30 120
Msa1417210 MtrunA17_Chr3g0089781 36.327 245 143 8 19 256 273 511 5.42e-30 120
Msa1417210 MtrunA17_Chr7g0248221 34.252 254 159 6 7 256 266 515 5.65e-30 120
Msa1417210 MtrunA17_Chr3g0089501 33.333 282 164 11 19 291 271 537 6.33e-30 120
Msa1417210 MtrunA17_Chr6g0467961 31.250 272 175 6 1 270 240 501 7.45e-30 120
Msa1417210 MtrunA17_Chr3g0089651 34.940 249 149 8 12 253 270 512 7.49e-30 120
Msa1417210 MtrunA17_Chr3g0089811 36.555 238 137 8 19 249 273 503 7.51e-30 120
Msa1417210 MtrunA17_Chr2g0282991 30.945 307 188 10 17 308 269 566 7.62e-30 120
Msa1417210 MtrunA17_Chr3g0085931 34.221 263 161 7 7 263 246 502 8.26e-30 120
Msa1417210 MtrunA17_Chr2g0299121 32.180 289 169 9 9 282 257 533 8.69e-30 119
Msa1417210 MtrunA17_Chr2g0299101 31.834 289 170 9 9 282 257 533 9.49e-30 119
Msa1417210 MtrunA17_Chr3g0084081 36.752 234 137 7 20 248 275 502 1.02e-29 119
Msa1417210 MtrunA17_Chr8g0348931 32.154 311 189 10 17 316 278 577 1.03e-29 119
Msa1417210 MtrunA17_Chr7g0248431 33.858 254 160 6 7 256 266 515 1.39e-29 118
Msa1417210 MtrunA17_Chr5g0430141 31.636 275 172 5 12 275 249 518 1.69e-29 119
Msa1417210 MtrunA17_Chr3g0089761 35.510 245 144 8 12 249 266 503 2.74e-29 118
Msa1417210 MtrunA17_Chr3g0089601 33.333 282 164 11 19 291 271 537 3.01e-29 118
Msa1417210 MtrunA17_Chr3g0085521 35.743 249 148 8 7 248 239 482 3.28e-29 118
Msa1417210 MtrunA17_Chr3g0089991 35.102 245 145 8 12 249 270 507 5.47e-29 117
Msa1417210 MtrunA17_Chr4g0010221 32.685 257 163 7 7 257 248 500 5.76e-29 117
Msa1417210 MtrunA17_Chr5g0430621 31.119 286 181 6 1 276 238 517 6.38e-29 117
Msa1417210 MtrunA17_Chr4g0008461 32.927 246 146 7 9 243 245 482 7.80e-29 117
Msa1417210 MtrunA17_Chr3g0086741 33.942 274 171 8 7 275 271 539 7.98e-29 117
Msa1417210 MtrunA17_Chr1g0169941 31.250 256 164 7 7 256 37 286 8.02e-29 113
Msa1417210 MtrunA17_Chr4g0010251 31.967 244 157 6 20 257 261 501 8.48e-29 117
Msa1417210 MtrunA17_Chr7g0257191 31.900 279 165 10 8 275 279 543 8.74e-29 116
Msa1417210 MtrunA17_Chr2g0309151 30.435 276 175 9 7 275 45 310 9.37e-29 115
Msa1417210 MtrunA17_Chr4g0051651 33.455 275 152 10 7 255 283 552 9.70e-29 116
Msa1417210 MtrunA17_Chr4g0010201 33.898 236 145 6 20 248 261 492 1.23e-28 116
Msa1417210 MtrunA17_Chr5g0430581 32.609 276 166 8 12 275 244 511 1.85e-28 115
Msa1417210 MtrunA17_Chr6g0468341 33.484 221 142 4 7 225 247 464 2.23e-28 115
Msa1417210 MtrunA17_Chr3g0085131 32.283 254 163 7 6 254 244 493 2.54e-28 115
Msa1417210 MtrunA17_Chr5g0430511 30.175 285 182 6 2 275 240 518 2.75e-28 115
Msa1417210 MtrunA17_Chr6g0468331 31.359 287 181 8 7 290 245 518 2.80e-28 115
Msa1417210 MtrunA17_Chr4g0027251 30.466 279 175 6 9 275 246 517 3.06e-28 115
Msa1417210 MtrunA17_Chr3g0089251 33.673 294 170 12 19 300 302 582 3.45e-28 115
Msa1417210 MtrunA17_Chr2g0299091 33.333 252 149 7 9 248 231 475 3.77e-28 115
Msa1417210 MtrunA17_Chr5g0414181 32.787 244 158 5 7 248 256 495 3.97e-28 115
Msa1417210 MtrunA17_Chr5g0429961 30.435 276 177 5 12 277 249 519 3.98e-28 115
Msa1417210 MtrunA17_Chr3g0089211 36.134 238 138 8 19 249 320 550 4.43e-28 114
Msa1417210 MtrunA17_Chr3g0083621 31.837 245 155 7 9 249 275 511 5.27e-28 114
Msa1417210 MtrunA17_Chr4g0048421 28.788 264 175 7 3 255 236 497 6.54e-28 114
Msa1417210 MtrunA17_Chr1g0155321 29.110 292 176 5 2 275 234 512 7.13e-28 114
Msa1417210 MtrunA17_Chr5g0429951 31.636 275 171 6 12 275 249 517 7.37e-28 114
Msa1417210 MtrunA17_Chr4g0048471 27.969 261 175 7 6 255 114 372 9.84e-28 113
Msa1417210 MtrunA17_Chr1g0189321 38.994 159 83 4 153 305 14 164 1.34e-27 108
Msa1417210 MtrunA17_Chr2g0299151 32.877 292 152 12 12 280 247 517 1.43e-27 113
Msa1417210 MtrunA17_Chr5g0430291 31.273 275 172 6 12 275 249 517 1.56e-27 113
Msa1417210 MtrunA17_Chr3g0085161 33.074 257 164 7 3 254 104 357 2.05e-27 112
Msa1417210 MtrunA17_Chr7g0244231 32.192 292 171 10 1 275 230 511 2.93e-27 112
Msa1417210 MtrunA17_Chr3g0091011 34.127 252 157 9 7 254 229 475 3.02e-27 112
Msa1417210 MtrunA17_Chr5g0430441 29.927 274 176 6 12 275 249 516 4.05e-27 112
Msa1417210 MtrunA17_Chr6g0468121 31.734 271 174 7 12 280 252 513 4.13e-27 112
Msa1417210 MtrunA17_Chr6g0468271 30.451 266 174 6 7 270 244 500 4.48e-27 112
Msa1417210 MtrunA17_Chr1g0155991 29.930 284 184 6 2 275 236 514 7.67e-27 111
Msa1417210 MtrunA17_Chr3g0083751 32.389 247 153 8 9 250 269 506 9.24e-27 110
Msa1417210 MtrunA17_Chr6g0468151 30.380 316 186 12 12 305 248 551 1.31e-26 110
Msa1417210 MtrunA17_Chr5g0430641 29.964 277 178 6 9 275 246 516 1.48e-26 110
Msa1417210 MtrunA17_Chr6g0478721 27.652 264 178 7 3 255 154 415 1.89e-26 110
Msa1417210 MtrunA17_Chr3g0085111 31.783 258 167 7 6 257 243 497 1.94e-26 110
Msa1417210 MtrunA17_Chr1g0169901 35.211 213 128 6 17 221 260 470 1.99e-26 110
Msa1417210 MtrunA17_Chr7g0257541 30.258 271 177 7 7 271 276 540 3.43e-26 109
Msa1417210 MtrunA17_Chr6g0484551 31.560 282 150 11 12 288 268 511 3.84e-26 108
Msa1417210 MtrunA17_Chr3g0113781 31.250 288 182 7 12 294 45 321 3.94e-26 108
Msa1417210 MtrunA17_Chr3g0113481 31.834 289 179 8 12 294 250 526 4.80e-26 108
Msa1417210 MtrunA17_Chr3g0113791 31.250 288 182 7 12 294 250 526 6.43e-26 108
Msa1417210 MtrunA17_Chr3g0080871 35.407 209 126 7 22 225 262 466 8.48e-26 108
Msa1417210 MtrunA17_Chr8g0355071 34.008 247 133 10 1 233 71 301 8.53e-26 104
Msa1417210 MtrunA17_Chr5g0433771 33.071 254 163 6 8 256 270 521 1.30e-25 107
Msa1417210 MtrunA17_Chr8g0338861 33.649 211 136 4 49 257 7 215 1.79e-25 107
Msa1417210 MtrunA17_Chr1g0147141 30.662 287 181 10 12 293 271 544 3.00e-25 106
Msa1417210 MtrunA17_Chr1g0197201 33.077 260 155 8 16 267 695 943 3.16e-25 106
Msa1417210 MtrunA17_Chr3g0089431 36.318 201 118 6 12 206 270 466 3.41e-25 105
Msa1417210 MtrunA17_Chr3g0084061 34.043 235 145 7 21 248 267 498 4.29e-25 106
Msa1417210 MtrunA17_Chr3g0083591 30.739 257 158 7 22 275 242 481 4.93e-25 105
Msa1417210 MtrunA17_Chr5g0414171 31.905 210 140 3 35 244 214 420 1.67e-24 102
Msa1417210 MtrunA17_Chr6g0468111 28.571 259 176 5 12 270 96 345 2.18e-24 103
Msa1417210 MtrunA17_Chr3g0085171 33.984 256 156 8 7 254 231 481 2.54e-24 103
Msa1417210 MtrunA17_Chr4g0071021 35.176 199 116 4 12 200 232 427 2.78e-24 102
Msa1417210 MtrunA17_Chr3g0085551 33.023 215 138 5 9 219 140 352 2.91e-24 103
Msa1417210 MtrunA17_Chr1g0159111 29.630 270 159 10 6 255 240 498 4.19e-24 103
Msa1417210 MtrunA17_Chr5g0417301 28.772 285 164 7 1 275 213 468 1.49e-23 101
Msa1417210 MtrunA17_Chr8g0351821 34.259 216 133 6 4 214 243 454 1.89e-23 100
Msa1417210 MtrunA17_Chr2g0299141 30.120 249 149 7 47 282 12 248 9.20e-23 97.8
Msa1417210 MtrunA17_Chr8g0356251 30.435 253 163 9 9 256 288 532 9.61e-23 99.4
Msa1417210 MtrunA17_Chr3g0101171 50.000 84 42 0 168 251 7 90 1.39e-22 90.9
Msa1417210 MtrunA17_Chr3g0085751 32.443 262 166 8 20 275 254 510 2.18e-22 98.2
Msa1417210 MtrunA17_Chr3g0085701 38.384 198 113 5 7 199 245 438 2.42e-22 97.8
Msa1417210 MtrunA17_Chr2g0308491 36.875 160 95 4 25 180 99 256 1.46e-21 92.0
Msa1417210 MtrunA17_Chr6g0456121 27.957 279 182 8 11 284 249 513 3.80e-21 94.4
Msa1417210 MtrunA17_Chr3g0083721 32.381 210 127 7 48 249 241 443 4.32e-21 94.4
Msa1417210 MtrunA17_Chr1g0168901 30.303 231 152 5 22 249 249 473 6.30e-21 93.6
Msa1417210 MtrunA17_Chr3g0084811 30.992 242 146 10 21 248 420 654 5.84e-20 90.9
Msa1417210 MtrunA17_Chr5g0430331 34.555 191 110 4 12 192 245 430 6.28e-20 89.7
Msa1417210 MtrunA17_Chr7g0257251 32.317 164 106 3 66 225 3 165 2.46e-19 84.0
Msa1417210 MtrunA17_Chr5g0439121 30.962 239 144 8 19 248 247 473 3.41e-19 88.6
Msa1417210 MtrunA17_Chr4g0010491 35.000 180 104 7 10 180 247 422 9.52e-19 86.3
Msa1417210 MtrunA17_Chr5g0415551 31.915 235 149 8 21 250 140 368 1.44e-18 86.7
Msa1417210 MtrunA17_Chr3g0091961 29.858 211 129 7 71 279 8 201 4.20e-18 84.3
Msa1417210 MtrunA17_Chr5g0414291 35.802 162 99 4 7 166 261 419 4.55e-18 84.3
Msa1417210 MtrunA17_Chr3g0082371 36.842 133 78 4 119 250 1 128 5.05e-18 84.3
Msa1417210 MtrunA17_Chr3g0091971 27.500 280 169 8 22 287 240 499 1.09e-17 84.0
Msa1417210 MtrunA17_Chr3g0083681 28.682 258 159 8 22 275 257 493 1.22e-17 84.0
Msa1417210 MtrunA17_Chr5g0402671 30.258 271 157 11 3 257 241 495 6.02e-17 81.6
Msa1417210 MtrunA17_Chr7g0255761 29.811 265 136 8 17 276 106 325 1.03e-16 79.7
Msa1417210 MtrunA17_Chr3g0085431 34.532 139 89 2 111 248 2 139 1.08e-16 80.5
Msa1417210 MtrunA17_Chr6g0474801 32.850 207 111 9 48 254 328 506 1.61e-16 80.5
Msa1417210 MtrunA17_Chr8g0360991 27.848 237 157 7 19 249 249 477 3.70e-16 79.3
Msa1417210 MtrunA17_Chr1g0189511 33.121 157 97 6 100 250 7 161 4.71e-16 77.0
Msa1417210 MtrunA17_Chr1g0153981 28.175 252 153 8 18 259 282 515 6.96e-16 78.6
Msa1417210 MtrunA17_Chr7g0257551 29.577 213 144 5 7 215 200 410 1.21e-15 77.0
Msa1417210 MtrunA17_Chr1g0153991 26.337 243 150 7 18 250 280 503 1.55e-15 77.4
Msa1417210 MtrunA17_Chr6g0478771 32.955 176 108 7 17 190 286 453 1.73e-15 77.4
Msa1417210 MtrunA17_Chr6g0479001 34.118 170 95 7 17 181 286 443 2.30e-15 77.0
Msa1417210 MtrunA17_Chr7g0255111 27.419 248 155 8 21 258 260 492 4.16e-15 76.3
Msa1417210 MtrunA17_Chr6g0479051 33.735 166 101 6 17 181 265 422 4.48e-15 76.3
Msa1417210 MtrunA17_Chr6g0469991 38.400 125 70 4 7 126 246 368 5.29e-15 75.1
Msa1417210 MtrunA17_Chr3g0100261 27.801 241 158 8 20 253 250 481 6.99e-15 75.5
Msa1417210 MtrunA17_Chr5g0444301 32.609 138 86 4 177 312 1 133 7.15e-15 75.1
Msa1417210 MtrunA17_Chr6g0478741 33.133 166 102 6 17 181 286 443 1.01e-14 75.1
Msa1417210 MtrunA17_Chr3g0087301 35.766 137 84 3 7 141 257 391 1.08e-14 75.1
Msa1417210 MtrunA17_Chr3g0100781 37.391 115 66 3 1 110 259 372 1.24e-14 73.9
Msa1417210 MtrunA17_Chr2g0314301 31.020 245 143 11 13 248 242 469 1.69e-14 74.7
Msa1417210 MtrunA17_Chr3g0096721 28.279 244 158 8 20 255 244 478 1.89e-14 74.3
Msa1417210 MtrunA17_Chr6g0474761 32.367 207 112 9 48 254 328 506 2.07e-14 73.9
Msa1417210 MtrunA17_Chr6g0478841 33.728 169 97 6 17 181 286 443 2.44e-14 73.9
Msa1417210 MtrunA17_Chr2g0313461 33.498 203 120 7 19 216 250 442 2.46e-14 73.9
Msa1417210 MtrunA17_Chr5g0410161 29.167 216 125 7 20 226 388 584 3.05e-14 73.6
Msa1417210 MtrunA17_Chr3g0108151 28.085 235 152 9 19 246 253 477 3.17e-14 73.6
Msa1417210 MtrunA17_Chr3g0083641 29.245 212 132 6 22 225 253 454 3.35e-14 73.6
Msa1417210 MtrunA17_Chr5g0402771 29.348 276 156 14 2 255 242 500 6.40e-14 72.8
Msa1417210 MtrunA17_Chr3g0102271 28.205 234 143 9 17 247 295 506 8.25e-14 72.4
Msa1417210 MtrunA17_Chr8g0374351 31.716 268 148 12 6 255 176 426 2.26e-13 70.9
Msa1417210 MtrunA17_Chr7g0255411 32.571 175 112 5 19 190 4 175 2.35e-13 70.1
Msa1417210 MtrunA17_Chr3g0091121 39.623 106 60 4 150 253 17 120 2.45e-13 70.9
Msa1417210 MtrunA17_Chr5g0430901 31.481 162 89 4 1 141 235 395 2.73e-13 70.9
Msa1417210 MtrunA17_Chr2g0299131 35.156 128 72 3 9 126 94 220 3.11e-13 68.2
Msa1417210 MtrunA17_Chr3g0086071 32.298 161 96 7 151 304 9 163 3.42e-13 70.1
Msa1417210 MtrunA17_Chr5g0414911 28.511 235 154 8 20 250 258 482 4.79e-13 70.1
Msa1417210 MtrunA17_Chr3g0100701 43.662 71 40 0 187 257 284 354 5.74e-13 69.7
Msa1417210 MtrunA17_Chr7g0229721 26.296 270 181 9 20 280 244 504 5.81e-13 69.7
Msa1417210 MtrunA17_Chr5g0410481 30.244 205 106 7 19 208 221 403 6.48e-13 69.7
Msa1417210 MtrunA17_Chr5g0410401 25.794 252 152 6 20 248 100 339 8.28e-13 69.3
Msa1417210 MtrunA17_Chr6g0480271 33.333 183 115 5 8 190 288 463 1.54e-12 68.2
Msa1417210 MtrunA17_Chr6g0480051 31.285 179 106 5 8 181 68 234 2.17e-12 67.8
Msa1417210 MtrunA17_Chr3g0105551 28.452 239 148 11 21 248 243 469 3.21e-12 67.8
Msa1417210 MtrunA17_Chr2g0313481 29.365 252 151 11 19 258 250 486 4.51e-12 67.0
Msa1417210 MtrunA17_Chr3g0085721 35.714 140 81 5 7 141 234 369 4.79e-12 66.2
Msa1417210 MtrunA17_Chr8g0343661 30.952 168 107 3 21 186 2 162 5.98e-12 66.6
Msa1417210 MtrunA17_Chr3g0081841 33.036 112 69 3 3 111 101 209 7.84e-12 65.9
Msa1417210 MtrunA17_Chr2g0323691 27.236 246 154 10 19 255 250 479 7.96e-12 66.6
Msa1417210 MtrunA17_Chr3g0105521 25.926 270 174 11 20 277 129 384 8.83e-12 66.2
Msa1417210 MtrunA17_Chr2g0282981 36.207 116 69 3 17 128 269 383 1.05e-11 65.5
Msa1417210 MtrunA17_Chr2g0313431 30.544 239 146 7 16 248 247 471 1.35e-11 65.5
Msa1417210 MtrunA17_Chr1g0197181 37.624 101 62 1 168 267 3 103 1.61e-11 65.1
Msa1417210 MtrunA17_Chr2g0330121 29.218 243 148 7 17 259 110 328 1.79e-11 65.1
Msa1417210 MtrunA17_Chr5g0410261 30.488 164 90 5 46 199 290 439 2.60e-11 64.7
Msa1417210 MtrunA17_Chr1g0172141 25.969 258 167 9 3 250 230 473 2.95e-11 64.7
Msa1417210 MtrunA17_Chr7g0221171 28.804 184 121 7 21 197 307 487 3.35e-11 64.3
Msa1417210 MtrunA17_Chr7g0248121 28.692 237 140 8 13 247 290 499 4.10e-11 64.3
Msa1417210 MtrunA17_Chr6g0479631 27.311 238 149 7 17 254 296 509 5.11e-11 63.9
Msa1417210 MtrunA17_Chr6g0475721 25.312 320 211 14 3 309 230 534 8.41e-11 62.8
Msa1417210 MtrunA17_Chr6g0485991 28.889 180 112 6 7 178 281 452 8.46e-11 63.2
Msa1417210 MtrunA17_Chr8g0374461 29.508 244 148 11 23 255 212 442 8.95e-11 62.8
Msa1417210 MtrunA17_Chr5g0410351 31.443 194 108 8 21 202 242 422 9.09e-11 63.2
Msa1417210 MtrunA17_Chr2g0313351 29.020 255 160 8 1 248 235 475 9.75e-11 63.2
Msa1417210 MtrunA17_Chr7g0255401 27.660 235 155 9 21 249 199 424 9.98e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1417210 AT3G46530.1 39.667 300 176 4 3 300 253 549 1.63e-54 191
Msa1417210 AT3G46710.1 36.601 306 186 5 1 305 247 545 9.29e-54 189
Msa1417210 AT3G07040.1 39.544 263 153 5 8 265 267 528 1.07e-52 186
Msa1417210 AT1G10920.1 37.654 324 179 6 1 303 122 443 6.48e-51 179
Msa1417210 AT1G10920.2 37.654 324 179 6 1 303 122 443 6.48e-51 179
Msa1417210 AT1G10920.4 37.654 324 179 6 1 303 122 443 6.48e-51 179
Msa1417210 AT1G50180.1 40.370 270 139 9 6 257 254 519 2.51e-50 179
Msa1417210 AT3G46730.1 36.949 295 183 2 6 300 257 548 2.40e-48 173
Msa1417210 AT5G35450.2 38.966 290 159 7 3 279 247 531 3.36e-48 173
Msa1417210 AT5G35450.1 38.966 290 159 7 3 279 247 531 3.36e-48 173
Msa1417210 AT1G53350.1 35.562 329 184 9 3 313 247 565 3.54e-48 173
Msa1417210 AT5G43470.3 39.116 294 157 8 3 279 249 537 2.27e-47 171
Msa1417210 AT5G43470.2 39.116 294 157 8 3 279 249 537 2.27e-47 171
Msa1417210 AT5G43470.4 39.116 294 157 8 3 279 249 537 2.27e-47 171
Msa1417210 AT5G43470.1 39.116 294 157 8 3 279 249 537 2.27e-47 171
Msa1417210 AT5G48620.6 38.435 294 159 8 3 279 249 537 1.91e-46 168
Msa1417210 AT5G48620.1 38.435 294 159 8 3 279 249 537 1.91e-46 168
Msa1417210 AT5G48620.4 38.435 294 159 8 3 279 249 537 1.91e-46 168
Msa1417210 AT5G48620.2 38.435 294 159 8 3 279 249 537 1.91e-46 168
Msa1417210 AT5G48620.3 38.435 294 159 8 3 279 249 537 1.91e-46 168
Msa1417210 AT5G48620.5 38.435 294 159 8 3 279 249 537 1.91e-46 168
Msa1417210 AT1G58390.1 36.364 297 168 6 3 280 249 543 2.02e-45 165
Msa1417210 AT1G58390.2 36.364 297 168 6 3 280 249 543 2.02e-45 165
Msa1417210 AT1G58410.1 35.517 290 171 6 4 279 249 536 8.73e-45 163
Msa1417210 AT1G58410.4 35.517 290 171 6 4 279 249 536 8.73e-45 163
Msa1417210 AT1G58410.2 35.517 290 171 6 4 279 249 536 8.73e-45 163
Msa1417210 AT1G59620.2 36.201 279 161 6 4 268 112 387 2.38e-41 153
Msa1417210 AT3G50950.2 35.115 262 161 5 9 262 249 509 4.19e-41 153
Msa1417210 AT3G50950.1 35.115 262 161 5 9 262 249 509 4.19e-41 153
Msa1417210 AT1G58400.3 34.812 293 169 9 3 277 250 538 1.94e-40 151
Msa1417210 AT1G58400.2 34.812 293 169 9 3 277 250 538 1.94e-40 151
Msa1417210 AT1G58602.2 34.694 294 169 9 4 278 254 543 5.32e-39 147
Msa1417210 AT1G58602.1 34.694 294 169 9 4 278 254 543 5.32e-39 147
Msa1417210 AT1G59124.1 35.563 284 166 7 4 272 250 531 1.27e-38 145
Msa1417210 AT1G58807.2 35.563 284 166 7 4 272 250 531 1.27e-38 145
Msa1417210 AT1G59124.2 35.563 284 166 7 4 272 250 531 1.79e-38 145
Msa1417210 AT1G58807.1 35.563 284 166 7 4 272 250 531 1.79e-38 145
Msa1417210 AT1G59218.1 34.948 289 168 7 4 274 250 536 2.38e-38 145
Msa1417210 AT1G59218.2 34.948 289 168 7 4 274 250 536 2.38e-38 145
Msa1417210 AT1G59218.3 34.948 289 168 7 4 274 250 536 2.38e-38 145
Msa1417210 AT1G58848.1 34.948 289 168 7 4 274 250 536 2.38e-38 145
Msa1417210 AT1G58848.2 34.948 289 168 7 4 274 250 536 2.38e-38 145
Msa1417210 AT1G59780.2 34.799 273 150 8 4 257 239 502 6.27e-38 144
Msa1417210 AT1G59780.1 34.799 273 150 8 4 257 244 507 6.83e-38 144
Msa1417210 AT1G10920.5 35.766 274 154 5 51 303 1 273 2.13e-36 137
Msa1417210 AT1G10920.3 35.766 274 154 5 51 303 1 273 2.13e-36 137
Msa1417210 AT1G58400.1 33.106 293 164 9 3 277 250 528 1.69e-35 136
Msa1417210 AT3G14470.1 35.865 237 127 8 22 248 279 500 1.59e-30 122
Msa1417210 AT3G14470.2 35.865 237 127 8 22 248 279 500 1.59e-30 122
Msa1417210 AT1G58410.3 30.769 286 158 6 4 279 249 504 1.09e-29 119
Msa1417210 AT5G63020.1 31.020 245 152 8 11 249 247 480 1.51e-27 113
Msa1417210 AT3G14460.1 29.431 299 190 10 12 301 264 550 1.02e-25 108
Msa1417210 AT1G12220.1 27.823 248 170 6 6 249 244 486 1.16e-25 108
Msa1417210 AT1G12220.2 27.823 248 170 6 6 249 244 486 1.16e-25 108
Msa1417210 AT1G12220.3 27.823 248 170 6 6 249 123 365 1.18e-25 107
Msa1417210 AT1G61180.1 33.202 253 148 12 6 249 240 480 3.35e-25 106
Msa1417210 AT1G61180.2 33.333 252 149 11 6 249 240 480 4.38e-25 106
Msa1417210 AT1G12280.1 27.953 254 169 7 2 249 240 485 2.65e-24 103
Msa1417210 AT1G61190.2 31.461 267 157 11 6 256 241 497 2.74e-24 103
Msa1417210 AT1G61190.3 31.461 267 157 11 6 256 241 497 2.74e-24 103
Msa1417210 AT1G61190.4 31.461 267 157 11 6 256 241 497 2.84e-24 103
Msa1417210 AT1G61190.1 31.461 267 157 11 6 256 241 497 3.05e-24 103
Msa1417210 AT1G12290.1 29.583 240 160 6 15 249 252 487 7.84e-24 102
Msa1417210 AT1G15890.1 30.196 255 160 10 3 249 238 482 8.10e-24 102
Msa1417210 AT1G15890.2 30.196 255 160 10 3 249 78 322 8.38e-24 102
Msa1417210 AT1G12290.4 29.583 240 160 6 15 249 210 445 1.02e-23 102
Msa1417210 AT1G12290.3 29.583 240 160 6 15 249 210 445 1.02e-23 102
Msa1417210 AT1G12290.2 29.583 240 160 6 15 249 210 445 1.02e-23 102
Msa1417210 AT1G61300.1 31.621 253 152 11 6 249 129 369 2.38e-23 101
Msa1417210 AT1G61300.2 31.621 253 152 11 6 249 129 369 2.48e-23 101
Msa1417210 AT4G27190.1 28.916 249 163 7 6 249 232 471 3.41e-23 100
Msa1417210 AT5G43740.1 29.134 254 166 8 2 249 234 479 3.45e-23 100
Msa1417210 AT5G43740.2 29.134 254 166 8 2 249 234 479 3.45e-23 100
Msa1417210 AT4G26090.1 29.482 251 159 9 12 255 247 486 3.97e-23 100
Msa1417210 AT1G12210.3 29.876 241 159 6 13 249 209 443 4.70e-23 100
Msa1417210 AT1G12210.2 29.876 241 159 6 13 249 209 443 4.70e-23 100
Msa1417210 AT1G12210.1 29.876 241 159 6 13 249 251 485 4.97e-23 100
Msa1417210 AT4G10780.2 30.041 243 153 9 15 249 250 483 3.61e-22 97.8
Msa1417210 AT4G10780.1 30.041 243 153 9 15 249 250 483 3.65e-22 97.8
Msa1417210 AT5G43730.4 29.528 254 165 9 2 249 235 480 3.56e-21 94.7
Msa1417210 AT5G43730.1 29.528 254 165 9 2 249 235 480 3.56e-21 94.7
Msa1417210 AT5G43730.3 29.528 254 165 9 2 249 235 480 3.56e-21 94.7
Msa1417210 AT5G43730.2 29.528 254 165 9 2 249 235 480 3.56e-21 94.7
Msa1417210 AT5G43730.5 29.528 254 165 9 2 249 235 480 3.56e-21 94.7
Msa1417210 AT5G47250.1 28.326 233 149 7 21 249 261 479 4.53e-21 94.4
Msa1417210 AT4G27220.2 30.380 237 146 9 20 249 224 448 5.44e-21 94.4
Msa1417210 AT4G27220.1 30.380 237 146 9 20 249 216 440 6.85e-21 94.0
Msa1417210 AT1G61310.1 30.196 255 164 10 6 249 242 493 7.19e-21 94.0
Msa1417210 AT1G51480.1 29.658 263 160 11 1 249 231 482 1.88e-20 92.8
Msa1417210 AT1G62630.1 29.098 244 160 9 13 249 247 484 7.63e-20 90.9
Msa1417210 AT1G63360.1 30.242 248 152 11 13 249 247 484 1.11e-19 90.5
Msa1417210 AT1G63360.2 30.242 248 152 11 13 249 212 449 1.21e-19 90.1
Msa1417210 AT1G63350.1 28.099 242 165 6 13 249 247 484 3.99e-19 88.6
Msa1417210 AT1G63350.4 28.099 242 165 6 13 249 247 484 4.25e-19 88.6
Msa1417210 AT1G63350.3 28.099 242 165 6 13 249 247 484 4.63e-19 88.6
Msa1417210 AT1G63350.2 28.099 242 165 6 13 249 247 484 4.63e-19 88.6
Msa1417210 AT5G47260.1 25.705 319 205 12 16 320 241 541 5.55e-18 85.5
Msa1417210 AT5G05400.1 28.980 245 158 8 6 249 243 472 1.21e-17 84.3
Msa1417210 AT5G05400.2 28.980 245 158 8 6 249 74 303 1.96e-17 83.6
Msa1417210 AT5G05400.3 28.980 245 158 8 6 249 74 303 1.96e-17 83.6
Msa1417210 AT5G66900.3 25.833 240 153 6 23 253 321 544 2.07e-14 74.3
Msa1417210 AT5G66900.2 25.833 240 153 6 23 253 321 544 4.53e-14 73.6
Msa1417210 AT5G66900.1 25.833 240 153 6 23 253 273 496 6.18e-14 73.2
Msa1417210 AT1G12280.2 23.108 251 152 7 2 249 202 414 1.22e-13 72.0
Msa1417210 AT5G66910.1 25.564 266 170 7 2 255 254 503 7.26e-13 69.7
Msa1417210 AT1G56510.1 29.703 202 122 8 17 215 287 471 3.59e-12 67.8
Msa1417210 AT5G04720.1 26.939 245 149 10 16 249 266 491 5.65e-12 67.0

Find 213 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTACAAACACTTGATTTA+AGG 0.075131 tig0024455:+9380 Msa1417210:three_prime_UTR
AGAAAATACCAAATGTAATT+TGG 0.170625 tig0024455:+9419 Msa1417210:three_prime_UTR
TGGTTGTGCTTGATGATATT+TGG 0.183750 tig0024455:+8310 Msa1417210:CDS
CTTAGGCAATTGGGGATAAA+TGG 0.184869 tig0024455:+9597 Msa1417210:three_prime_UTR
AACATTGCATCCATGATAAT+TGG 0.204186 tig0024455:-7605 None:intergenic
ACTGATTCAATTAAGGTATC+TGG 0.220116 tig0024455:+9300 Msa1417210:three_prime_UTR
GGTTGTGCTTGATGATATTT+GGG 0.243092 tig0024455:+8311 Msa1417210:CDS
AAAACTTAAAATGCTTGTTT+TGG 0.244506 tig0024455:+9886 Msa1417210:three_prime_UTR
AAAGGAAAAGAGGAGTATTT+TGG 0.256008 tig0024455:+8993 Msa1417210:CDS
TCTGTTGTTGATTCGATAAT+TGG 0.256754 tig0024455:-10193 None:intergenic
AACCGTAGATGCCCGCTATC+TGG 0.278954 tig0024455:-9490 None:intergenic
TTTGGCGGAGAAAAGGTATT+TGG 0.294275 tig0024455:+8290 Msa1417210:CDS
TCATGCTGCAGATTGATTTC+CGG 0.297053 tig0024455:+10388 Msa1417210:intron
GTTGAGGTAAAAGAAGATTT+TGG 0.300695 tig0024455:+7995 Msa1417210:five_prime_UTR
TTAAGAAATCATACCGTTCA+TGG 0.301436 tig0024455:-9082 None:intergenic
GAATAAGCTTCATAATGTTT+TGG 0.310508 tig0024455:+8272 Msa1417210:CDS
GTGATATCCTTCAGTCCTTC+TGG 0.310871 tig0024455:-10082 None:intergenic
AGTCATTCCCAATTAATAAA+AGG 0.312092 tig0024455:-10592 None:intergenic
TTTGTTGACGACGAGGATTT+TGG 0.320208 tig0024455:+8395 Msa1417210:CDS
GTCTGAATGTTCATACCCTT+TGG 0.322470 tig0024455:-8777 None:intergenic
TTAGCAAAATGACCAATCTT+AGG 0.323678 tig0024455:+9580 Msa1417210:three_prime_UTR
CAGATATAGACAAGAAAGTT+TGG 0.326441 tig0024455:+9159 Msa1417210:CDS
TTTACCAATTCTTTCAATTC+GGG 0.326734 tig0024455:-7807 None:intergenic
CGATCTTCTTAGAGAGCTTT+CGG 0.336786 tig0024455:+8965 Msa1417210:CDS
TTTATGTTTCTGAGGAGTAT+AGG 0.341110 tig0024455:+8163 Msa1417210:five_prime_UTR
CATATATTGAGGCTGGAAAC+TGG 0.345931 tig0024455:+9542 Msa1417210:three_prime_UTR
TACTCTTCTTCAGCATAATA+AGG 0.346844 tig0024455:-7968 None:intergenic
CAGTTTCCAGCCTCAATATA+TGG 0.349003 tig0024455:-9541 None:intergenic
TTCCCTCACATTAAACAAAT+AGG 0.352986 tig0024455:+10696 Msa1417210:three_prime_UTR
GTTGGAACGGTGAGTTCGTT+GGG 0.353159 tig0024455:+8918 Msa1417210:CDS
TGGTGTTGCGAGGGAGGATA+TGG 0.353790 tig0024455:+8224 Msa1417210:exon
CGTACAAATTCCACAGACTA+TGG 0.354880 tig0024455:-10631 None:intergenic
AGACATGTTGTTTCGATTGT+TGG 0.357368 tig0024455:+8055 Msa1417210:five_prime_UTR
ATGACCAATCTTAGGCAATT+GGG 0.357907 tig0024455:+9588 Msa1417210:three_prime_UTR
TTGGGGATAAATGGATTATC+AGG 0.358410 tig0024455:+9606 Msa1417210:three_prime_UTR
AGTTCCCGAATTGAAAGAAT+TGG 0.359503 tig0024455:+7803 Msa1417210:five_prime_UTR
GGGAATGACTTCTAATTAAA+CGG 0.361856 tig0024455:+10605 Msa1417210:three_prime_UTR
CTTAGGAGTAAAGCATTTCC+TGG 0.372626 tig0024455:+8495 Msa1417210:CDS
ATTGTTGGTATGGGTGGTTT+AGG 0.375760 tig0024455:+8070 Msa1417210:five_prime_UTR
ACCAACTTCCAAATTACATT+TGG 0.376149 tig0024455:-9427 None:intergenic
ACCTTAAATCAAGTGTTTGT+AGG 0.376596 tig0024455:-9381 None:intergenic
GATTTCCGGCGCAGTGTTGT+TGG 0.377330 tig0024455:+10402 Msa1417210:three_prime_UTR
CTTGCTGTTGTTGTGGTTGG+TGG 0.377725 tig0024455:+8588 Msa1417210:CDS
AATGACCAATCTTAGGCAAT+TGG 0.379635 tig0024455:+9587 Msa1417210:three_prime_UTR
TCTGAATGTTCATACCCTTT+GGG 0.380001 tig0024455:-8776 None:intergenic
CCTCTTGCTGTTGTTGTGGT+TGG 0.383236 tig0024455:+8585 Msa1417210:CDS
CTGCTACCATCACGGTCATC+AGG 0.384468 tig0024455:-7908 None:intergenic
AGGGAAGCATCTTCAAGTTC+TGG 0.387214 tig0024455:+10449 Msa1417210:three_prime_UTR
ATATGGTAGGCTTTGAAGAT+TGG 0.392112 tig0024455:-9524 None:intergenic
CTGCAGAAGTTGTCTTTGAA+TGG 0.394380 tig0024455:+9752 Msa1417210:three_prime_UTR
TATCCCCAATTGCCTAAGAT+TGG 0.394533 tig0024455:-9592 None:intergenic
ATCAGTTCCCCTATCGTACT+TGG 0.397609 tig0024455:-9283 None:intergenic
GCTCACTCTTCTGAAAGAAT+TGG 0.397733 tig0024455:+9979 Msa1417210:three_prime_UTR
TAGGGGAACTGATTCAATTA+AGG 0.403948 tig0024455:+9293 Msa1417210:three_prime_UTR
GCGCAGTGTTGTTGGGTGAT+AGG 0.410018 tig0024455:+10410 Msa1417210:three_prime_UTR
CTAAGTTTATAGAGATGAAA+AGG 0.413960 tig0024455:-7782 None:intergenic
CCTCTGCCATCGAAGGTTTG+AGG 0.417176 tig0024455:-7473 None:intergenic
TGTTGTTTCGATTGTTGGTA+TGG 0.417483 tig0024455:+8060 Msa1417210:five_prime_UTR
TGAGGTTGAGTCAATTGAGT+TGG 0.418003 tig0024455:-7455 None:intergenic
TAGGTTAAGCAAATTTCCTA+TGG 0.419252 tig0024455:-9362 None:intergenic
TTAGCGTTAGAGCCATGGTT+AGG 0.419896 tig0024455:-7884 None:intergenic
CCAACGAACGTGTTCGTATG+TGG 0.420094 tig0024455:+7658 Msa1417210:five_prime_UTR
GAGGTTGAGTCAATTGAGTT+GGG 0.423128 tig0024455:-7454 None:intergenic
AAGGTTAGTTTCAACAGATT+CGG 0.426868 tig0024455:-9812 None:intergenic
ACCAAATGTAATTTGGAAGT+TGG 0.430885 tig0024455:+9426 Msa1417210:three_prime_UTR
AATGCCATTGCTTGAGTACA+TGG 0.433131 tig0024455:+10027 Msa1417210:three_prime_UTR
TTCCTATTTGTTTAATGTGA+GGG 0.437643 tig0024455:-10698 None:intergenic
CTGTAGGTGGGAATTATGTA+AGG 0.450216 tig0024455:-9831 None:intergenic
AAATGGATTATCAGGACAAA+TGG 0.452782 tig0024455:+9614 Msa1417210:three_prime_UTR
AACTTCTTCTTCAATAATGA+AGG 0.453062 tig0024455:-7428 None:intergenic
TGTTAGAATTAGACGGTGTT+CGG 0.457637 tig0024455:+9248 Msa1417210:three_prime_UTR
ATGAGAGTTATGCGTTACTT+AGG 0.458960 tig0024455:+8478 Msa1417210:CDS
CTGATTCAATTAAGGTATCT+GGG 0.460529 tig0024455:+9301 Msa1417210:three_prime_UTR
AGGGAGTTGCAGAATATTAG+AGG 0.460761 tig0024455:+8651 Msa1417210:CDS
GTTTAGCATCGGCGTCTTTG+AGG 0.470448 tig0024455:-7629 None:intergenic
CAAAGACAACTTCTGCAGTT+GGG 0.475744 tig0024455:-9747 None:intergenic
CTCCAGATAGCGGGCATCTA+CGG 0.476081 tig0024455:+9488 Msa1417210:three_prime_UTR
TGAGACAGCTGCATAAAGAT+TGG 0.476750 tig0024455:-9719 None:intergenic
ACATTTCACCACAATCTCCT+TGG 0.477532 tig0024455:-8553 None:intergenic
TTCTGAGGAGTATAGGAGGA+AGG 0.478933 tig0024455:+8170 Msa1417210:five_prime_UTR
AAATTCTTTGATCATTGAAG+TGG 0.481456 tig0024455:-10558 None:intergenic
AGTTGAAGTCGAGTGGAGAA+TGG 0.482632 tig0024455:+8625 Msa1417210:CDS
TTACTCCCTAATTTCCTCCT+CGG 0.483032 tig0024455:-8369 None:intergenic
GGCGGGAACTCATGTGGATC+AGG 0.484578 tig0024455:-9791 None:intergenic
AGCCTACCATATATTGAGGC+TGG 0.484607 tig0024455:+9535 Msa1417210:three_prime_UTR
CACTCTTCTGAAAGAATTGG+AGG 0.486252 tig0024455:+9982 Msa1417210:three_prime_UTR
CCAACCACAACAACAGCAAG+AGG 0.489728 tig0024455:-8585 None:intergenic
ATTTCCGGCGCAGTGTTGTT+GGG 0.490610 tig0024455:+10403 Msa1417210:three_prime_UTR
TCAAAGACAACTTCTGCAGT+TGG 0.493231 tig0024455:-9748 None:intergenic
TAGCGTTAGAGCCATGGTTA+GGG 0.495012 tig0024455:-7883 None:intergenic
TGTCTTTACTTTATTTGTGT+CGG 0.497268 tig0024455:-7379 None:intergenic
GGAATGGAAAGTTGAGGAAA+AGG 0.498630 tig0024455:+10003 Msa1417210:three_prime_UTR
AGTCGAGTGGAGAATGGGCT+AGG 0.500563 tig0024455:+8631 Msa1417210:CDS
GAAAGCGACGTTACGAATCT+CGG 0.501899 tig0024455:-7685 None:intergenic
TTTGCCTCTTGCTGTTGTTG+TGG 0.502334 tig0024455:+8581 Msa1417210:CDS
TCTGTTCTTTCTACTATACA+AGG 0.502394 tig0024455:+9642 Msa1417210:three_prime_UTR
ACACTGAATTTAAGCTACTC+AGG 0.503315 tig0024455:+9224 Msa1417210:three_prime_UTR
CCACATACGAACACGTTCGT+TGG 0.503740 tig0024455:-7658 None:intergenic
TTCTGAAAGAATTGGAGGAA+TGG 0.506890 tig0024455:+9987 Msa1417210:three_prime_UTR
TGCTATAATACAGTGACATC+AGG 0.509798 tig0024455:+10669 Msa1417210:three_prime_UTR
GTTGGATTGTTGTTTAGCAT+CGG 0.510642 tig0024455:-7640 None:intergenic
GTTAGCTTGCCAAGTACGAT+AGG 0.512656 tig0024455:+9274 Msa1417210:three_prime_UTR
TAGGATGCCGGAGGAGGAGT+TGG 0.514433 tig0024455:+8248 Msa1417210:CDS
TTATTCACCAACTCCTCCTC+CGG 0.516987 tig0024455:-8255 None:intergenic
GAATTGAGTTTCAGTGCTGA+AGG 0.518132 tig0024455:+9932 Msa1417210:three_prime_UTR
GTTGAAGTCGAGTGGAGAAT+GGG 0.520414 tig0024455:+8626 Msa1417210:CDS
AGTTGGAACGGTGAGTTCGT+TGG 0.521287 tig0024455:+8917 Msa1417210:CDS
CAACGAACGTGTTCGTATGT+GGG 0.522480 tig0024455:+7659 Msa1417210:five_prime_UTR
CCAACGAGAGATTGAGACAT+TGG 0.523975 tig0024455:+7933 Msa1417210:five_prime_UTR
AGGTACTTGAATGAGTTGAT+TGG 0.525860 tig0024455:+8879 Msa1417210:CDS
GGTAGGTGTATGATTCAAGT+TGG 0.527033 tig0024455:+8900 Msa1417210:CDS
GAGGTTGCTTTACATGCTGA+TGG 0.527264 tig0024455:+8417 Msa1417210:CDS
TGTTGATGGTGTTGCGAGGG+AGG 0.529921 tig0024455:+8218 Msa1417210:five_prime_UTR
CCGCTATCTGGAGAATCAAA+TGG 0.533645 tig0024455:-9478 None:intergenic
GGGAAACTTCCGCTTTCCAT+AGG 0.535131 tig0024455:+9346 Msa1417210:three_prime_UTR
CAGGGTTAGCGTTAGAGCCA+TGG 0.535276 tig0024455:-7889 None:intergenic
ATTCCTATTTGTTTAATGTG+AGG 0.538517 tig0024455:-10699 None:intergenic
CATTTGATTCTCCAGATAGC+GGG 0.540725 tig0024455:+9479 Msa1417210:three_prime_UTR
GTTGTTTCGATTGTTGGTAT+GGG 0.541972 tig0024455:+8061 Msa1417210:five_prime_UTR
TTAGCTTGCCAAGTACGATA+GGG 0.543118 tig0024455:+9275 Msa1417210:three_prime_UTR
AGCTTGGGTTTATGTTTCTG+AGG 0.543242 tig0024455:+8155 Msa1417210:five_prime_UTR
TGTTTGTTCAAAGAGAAGTT+CGG 0.543469 tig0024455:-7526 None:intergenic
AGCAAATTTCCTATGGAAAG+CGG 0.547320 tig0024455:-9355 None:intergenic
TTCGGTCACCAAAGGAAAAG+AGG 0.547444 tig0024455:+8983 Msa1417210:CDS
CAATAGACTCCTTCTGTAGG+TGG 0.549473 tig0024455:-9844 None:intergenic
AAAGATTCCAGAAGGACTGA+AGG 0.550687 tig0024455:+10075 Msa1417210:three_prime_UTR
TATGGATAGGATGCCGGAGG+AGG 0.554546 tig0024455:+8242 Msa1417210:exon
CCTCAAACCTTCGATGGCAG+AGG 0.554690 tig0024455:+7473 Msa1417210:five_prime_UTR
CTTGGCAAGATTCTCAAACT+CGG 0.557924 tig0024455:-8535 None:intergenic
GTTATGAAAATGGGTTTGGA+TGG 0.563091 tig0024455:-7747 None:intergenic
TCTTCTTCAATAATGAAGGA+AGG 0.563763 tig0024455:-7424 None:intergenic
GGAGGATATGGATAGGATGC+CGG 0.566030 tig0024455:+8236 Msa1417210:exon
CTATACATTCTTGCCATGAA+CGG 0.566892 tig0024455:+9069 Msa1417210:CDS
TGACCAATCTTAGGCAATTG+GGG 0.570205 tig0024455:+9589 Msa1417210:three_prime_UTR
ATAGTGATCCTCATCAGTTA+AGG 0.571894 tig0024455:+8442 Msa1417210:CDS
TCTGATAGACGTGAAATGTA+TGG 0.573498 tig0024455:+7845 Msa1417210:five_prime_UTR
ATGTTTCTGAGGAGTATAGG+AGG 0.575537 tig0024455:+8166 Msa1417210:five_prime_UTR
TTCGACTTGGTCGCGAACTG+TGG 0.575642 tig0024455:-7571 None:intergenic
ATTAGACTATGGGTCGCTGA+AGG 0.576200 tig0024455:+8810 Msa1417210:CDS
GTTTCGATTGTTGGTATGGG+TGG 0.578025 tig0024455:+8064 Msa1417210:five_prime_UTR
GAAGATTACAAGCTGTACAA+TGG 0.578597 tig0024455:-10476 None:intergenic
ACTATCACTTCAATCTGAAG+AGG 0.579893 tig0024455:+9688 Msa1417210:three_prime_UTR
CCAATGTCTCAATCTCTCGT+TGG 0.580447 tig0024455:-7933 None:intergenic
TCTTCAGCATAATAAGGTGA+TGG 0.582209 tig0024455:-7962 None:intergenic
AGTCTATGTTCAAAATCTAC+CGG 0.582883 tig0024455:-10136 None:intergenic
AGATAGCGGGCATCTACGGT+TGG 0.586790 tig0024455:+9492 Msa1417210:three_prime_UTR
TGCTACCATCACGGTCATCA+GGG 0.587288 tig0024455:-7907 None:intergenic
GTCGAGTGGAGAATGGGCTA+GGG 0.588536 tig0024455:+8632 Msa1417210:CDS
TTAGTTTCAACAGATTCGGC+GGG 0.588815 tig0024455:-9808 None:intergenic
TAGGAACTTACATCTGAGGA+AGG 0.589025 tig0024455:+10429 Msa1417210:three_prime_UTR
TTGCGAGGGAGGATATGGAT+AGG 0.589263 tig0024455:+8229 Msa1417210:exon
TTGAGAAAGACTAATCTCGA+AGG 0.590028 tig0024455:+9325 Msa1417210:three_prime_UTR
GATGGTATCACACTCGCACC+AGG 0.590038 tig0024455:-8513 None:intergenic
GAGGTGTTGATGGTGTTGCG+AGG 0.590222 tig0024455:+8214 Msa1417210:five_prime_UTR
CGTTGGCACTGCTACCATCA+CGG 0.590235 tig0024455:-7916 None:intergenic
AGAGAGCTTTCGGTCACCAA+AGG 0.592053 tig0024455:+8975 Msa1417210:CDS
TAAACGGTTGCCATAGTCTG+TGG 0.594121 tig0024455:+10621 Msa1417210:three_prime_UTR
GGGAGTTGCAGAATATTAGA+GGG 0.594453 tig0024455:+8652 Msa1417210:CDS
CACTGAATTTAAGCTACTCA+GGG 0.597399 tig0024455:+9225 Msa1417210:three_prime_UTR
AGGTGTTGATGGTGTTGCGA+GGG 0.597579 tig0024455:+8215 Msa1417210:five_prime_UTR
ATCACCCAACAACACTGCGC+CGG 0.601293 tig0024455:-10407 None:intergenic
TAAAGAAAACACGATTTCAA+CGG 0.602457 tig0024455:-8741 None:intergenic
TCAAAGCCTACCATATATTG+AGG 0.604947 tig0024455:+9531 Msa1417210:three_prime_UTR
CGAGTTTGAGAATCTTGCCA+AGG 0.605334 tig0024455:+8536 Msa1417210:CDS
TTGAGTACATGGTTATTGAT+CGG 0.605718 tig0024455:+10038 Msa1417210:three_prime_UTR
TCTAGAAAGTTGAAGTCGAG+TGG 0.606201 tig0024455:+8618 Msa1417210:CDS
TGAGAAAGACTAATCTCGAA+GGG 0.606742 tig0024455:+9326 Msa1417210:three_prime_UTR
TGGCAATAGACTCCTTCTGT+AGG 0.606975 tig0024455:-9847 None:intergenic
TAACTCTCATCATGATTCAA+CGG 0.607988 tig0024455:-8465 None:intergenic
GCAAGATTCTCAAACTCGGA+TGG 0.608461 tig0024455:-8531 None:intergenic
AAGAATGTATAGAATGCCGA+CGG 0.608785 tig0024455:-9058 None:intergenic
AGGTTGCTTTACATGCTGAT+GGG 0.609095 tig0024455:+8418 Msa1417210:CDS
ATAACCATGTACTCAAGCAA+TGG 0.612082 tig0024455:-10031 None:intergenic
GCTGGAAACTGGATATCAGA+TGG 0.612294 tig0024455:+9553 Msa1417210:three_prime_UTR
GCAGTTTCACCACCTTCTTG+AGG 0.612446 tig0024455:-8840 None:intergenic
AGATTCGGCGGGAACTCATG+TGG 0.612802 tig0024455:-9797 None:intergenic
AATTGAGTTTCAGTGCTGAA+GGG 0.613970 tig0024455:+9933 Msa1417210:three_prime_UTR
AATAGACTCCTTCTGTAGGT+GGG 0.614377 tig0024455:-9843 None:intergenic
ACTCAACCTCAAACCTTCGA+TGG 0.614547 tig0024455:+7467 Msa1417210:five_prime_UTR
GAGATTGTGGTGAAATGTGA+AGG 0.616655 tig0024455:+8558 Msa1417210:CDS
GAATCTTGCCAAGGAGATTG+TGG 0.618959 tig0024455:+8545 Msa1417210:CDS
ACATAATTCCCACCTACAGA+AGG 0.619310 tig0024455:+9835 Msa1417210:three_prime_UTR
ACTGCTACCTCTGCCATCGA+AGG 0.619483 tig0024455:-7480 None:intergenic
GTGATAGTGACAGTGAATGA+AGG 0.619730 tig0024455:-9673 None:intergenic
CTCAGGGTGTTAGAATTAGA+CGG 0.621154 tig0024455:+9241 Msa1417210:three_prime_UTR
TTCCAGCCTCAATATATGGT+AGG 0.622822 tig0024455:-9537 None:intergenic
ATTGGAGGAATGGAAAGTTG+AGG 0.626866 tig0024455:+9997 Msa1417210:three_prime_UTR
GTGTATGATTCAAGTTGGAA+CGG 0.627291 tig0024455:+8905 Msa1417210:CDS
TAGCTTGCCAAGTACGATAG+GGG 0.628515 tig0024455:+9276 Msa1417210:three_prime_UTR
GAGTTGCAGAATATTAGAGG+GGG 0.628712 tig0024455:+8654 Msa1417210:CDS
GTTAGTTTCAACAGATTCGG+CGG 0.629832 tig0024455:-9809 None:intergenic
AAGCTGAGAAAGATTCCAGA+AGG 0.631636 tig0024455:+10067 Msa1417210:three_prime_UTR
CTCAGCTAACTAAATCCCGT+CGG 0.633630 tig0024455:+9042 Msa1417210:CDS
ACTTGAATGAGTTGATTGGT+AGG 0.638532 tig0024455:+8883 Msa1417210:CDS
TGAAGAAGAGTATGTTGTTG+AGG 0.644555 tig0024455:+7979 Msa1417210:five_prime_UTR
GTGATAGGAACTTACATCTG+AGG 0.645377 tig0024455:+10425 Msa1417210:three_prime_UTR
CCATTTGATTCTCCAGATAG+CGG 0.646517 tig0024455:+9478 Msa1417210:three_prime_UTR
AATTTGTACGAGTATTAATG+CGG 0.654962 tig0024455:+10644 Msa1417210:three_prime_UTR
AAAGCTCTCTAAGAAGATCG+TGG 0.655970 tig0024455:-8962 None:intergenic
AGGAACTTACATCTGAGGAA+GGG 0.656933 tig0024455:+10430 Msa1417210:three_prime_UTR
AAACACGATTTCAACGGCGA+AGG 0.657801 tig0024455:-8735 None:intergenic
TTCAACGGCCTTAACTGATG+AGG 0.658687 tig0024455:-8450 None:intergenic
TTGGAACGGTGAGTTCGTTG+GGG 0.661524 tig0024455:+8919 Msa1417210:CDS
GTTGTGCTTGATGATATTTG+GGG 0.669096 tig0024455:+8312 Msa1417210:CDS
TTGTGCTTGATGATATTTGG+GGG 0.674043 tig0024455:+8313 Msa1417210:CDS
GGATATGGATAGGATGCCGG+AGG 0.677024 tig0024455:+8239 Msa1417210:exon
GTTATCAGAAACCCTAACCA+TGG 0.679553 tig0024455:+7872 Msa1417210:five_prime_UTR
CTGCAGAAGATGTTGCTCAG+AGG 0.683606 tig0024455:+8859 Msa1417210:CDS
GGAGTTGCAGAATATTAGAG+GGG 0.683979 tig0024455:+8653 Msa1417210:CDS
AGAATGTATAGAATGCCGAC+GGG 0.688585 tig0024455:-9057 None:intergenic
GCTAACCCTGATGACCGTGA+TGG 0.715140 tig0024455:+7902 Msa1417210:five_prime_UTR
GGCTATGTGAGAGATAGTTG+AGG 0.717852 tig0024455:-7550 None:intergenic
GGAAACTGGATATCAGATGG+CGG 0.723998 tig0024455:+9556 Msa1417210:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTGATTAGACTAT+GGG + tig0024455:8800-8819 Msa1417210:CDS 15.0%
!!! TTGTAATCTTCATTTTATTT+CGG + tig0024455:10488-10507 Msa1417210:three_prime_UTR 15.0%
!!! TTTTTACTCCTTTTATTAAT+TGG + tig0024455:10584-10603 Msa1417210:three_prime_UTR 15.0%
!!! TTTTACTCCTTTTATTAATT+GGG + tig0024455:10585-10604 Msa1417210:three_prime_UTR 15.0%
!!! GAAGATTTTGTTATGAAAAT+GGG - tig0024455:7759-7778 None:intergenic 20.0%
!!! TGAAGATTTTGTTATGAAAA+TGG - tig0024455:7760-7779 None:intergenic 20.0%
!!! TTTTACCAATTCTTTCAATT+CGG - tig0024455:7811-7830 None:intergenic 20.0%
!!! AAATCGTGTTTTCTTTATTT+GGG + tig0024455:8747-8766 Msa1417210:CDS 20.0%
!! CAAAAAAATTGATTAGACTA+TGG + tig0024455:8799-8818 Msa1417210:CDS 20.0%
!! AGAAAATACCAAATGTAATT+TGG + tig0024455:9419-9438 Msa1417210:three_prime_UTR 20.0%
!!! AAAACAAGCATTTTAAGTTT+TGG - tig0024455:9887-9906 None:intergenic 20.0%
!!! AAAACTTAAAATGCTTGTTT+TGG + tig0024455:9886-9905 Msa1417210:three_prime_UTR 20.0%
!!! AAACTTAAAATGCTTGTTTT+GGG + tig0024455:9887-9906 Msa1417210:three_prime_UTR 20.0%
!! TTGAAGAAACTAAAAATTAC+AGG + tig0024455:10109-10128 Msa1417210:three_prime_UTR 20.0%
!! TGTCTTTACTTTATTTGTGT+CGG - tig0024455:7382-7401 None:intergenic 25.0%
! AACTTCTTCTTCAATAATGA+AGG - tig0024455:7431-7450 None:intergenic 25.0%
!!! TTTTGTTATGAAAATGGGTT+TGG - tig0024455:7754-7773 None:intergenic 25.0%
! CTAAGTTTATAGAGATGAAA+AGG - tig0024455:7785-7804 None:intergenic 25.0%
! TTTACCAATTCTTTCAATTC+GGG - tig0024455:7810-7829 None:intergenic 25.0%
!!! ATCATTTTGAGATTAAAGCT+TGG + tig0024455:8139-8158 Msa1417210:five_prime_UTR 25.0%
!!! TCATTTTGAGATTAAAGCTT+GGG + tig0024455:8140-8159 Msa1417210:five_prime_UTR 25.0%
!! GAATAAGCTTCATAATGTTT+TGG + tig0024455:8272-8291 Msa1417210:CDS 25.0%
! TAAAGAAAACACGATTTCAA+CGG - tig0024455:8744-8763 None:intergenic 25.0%
!! GAAATCGTGTTTTCTTTATT+TGG + tig0024455:8746-8765 Msa1417210:CDS 25.0%
!! TAGATTTTGAACATAGACTT+CGG + tig0024455:10140-10159 Msa1417210:three_prime_UTR 25.0%
!! ACAACAGACATTTTATCAAT+TGG + tig0024455:10208-10227 Msa1417210:three_prime_UTR 25.0%
! AAATTCTTTGATCATTGAAG+TGG - tig0024455:10561-10580 None:intergenic 25.0%
! AGTCATTCCCAATTAATAAA+AGG - tig0024455:10595-10614 None:intergenic 25.0%
! AATTTGTACGAGTATTAATG+CGG + tig0024455:10644-10663 Msa1417210:three_prime_UTR 25.0%
! TTCCTATTTGTTTAATGTGA+GGG - tig0024455:10701-10720 None:intergenic 25.0%
! ATTCCTATTTGTTTAATGTG+AGG - tig0024455:10702-10721 None:intergenic 25.0%
TCTTCTTCAATAATGAAGGA+AGG - tig0024455:7427-7446 None:intergenic 30.0%
TGTTTGTTCAAAGAGAAGTT+CGG - tig0024455:7529-7548 None:intergenic 30.0%
CTCTCAAAAACCAATTATCA+TGG + tig0024455:7595-7614 Msa1417210:five_prime_UTR 30.0%
AACATTGCATCCATGATAAT+TGG - tig0024455:7608-7627 None:intergenic 30.0%
TACTCTTCTTCAGCATAATA+AGG - tig0024455:7971-7990 None:intergenic 30.0%
! GTTGAGGTAAAAGAAGATTT+TGG + tig0024455:7995-8014 Msa1417210:five_prime_UTR 30.0%
! TGGTTCAATTTTTACACAGT+TGG + tig0024455:8015-8034 Msa1417210:five_prime_UTR 30.0%
!! TTTTACACAGTTGGTTAGTT+TGG + tig0024455:8024-8043 Msa1417210:five_prime_UTR 30.0%
! TTTATGTTTCTGAGGAGTAT+AGG + tig0024455:8163-8182 Msa1417210:five_prime_UTR 30.0%
!! TAAGCTTCATAATGTTTTGG+CGG + tig0024455:8275-8294 Msa1417210:CDS 30.0%
TAACTCTCATCATGATTCAA+CGG - tig0024455:8468-8487 None:intergenic 30.0%
! AAAATACTCCTCTTTTCCTT+TGG - tig0024455:8994-9013 None:intergenic 30.0%
!!! AAAGGAAAAGAGGAGTATTT+TGG + tig0024455:8993-9012 Msa1417210:CDS 30.0%
TTAAGAAATCATACCGTTCA+TGG - tig0024455:9085-9104 None:intergenic 30.0%
CAGATATAGACAAGAAAGTT+TGG + tig0024455:9159-9178 Msa1417210:CDS 30.0%
! ACTGATTCAATTAAGGTATC+TGG + tig0024455:9300-9319 Msa1417210:three_prime_UTR 30.0%
! CTGATTCAATTAAGGTATCT+GGG + tig0024455:9301-9320 Msa1417210:three_prime_UTR 30.0%
TAGGTTAAGCAAATTTCCTA+TGG - tig0024455:9365-9384 None:intergenic 30.0%
ACCTACAAACACTTGATTTA+AGG + tig0024455:9380-9399 Msa1417210:three_prime_UTR 30.0%
ACCTTAAATCAAGTGTTTGT+AGG - tig0024455:9384-9403 None:intergenic 30.0%
ACCAAATGTAATTTGGAAGT+TGG + tig0024455:9426-9445 Msa1417210:three_prime_UTR 30.0%
ACCAACTTCCAAATTACATT+TGG - tig0024455:9430-9449 None:intergenic 30.0%
TTAGCAAAATGACCAATCTT+AGG + tig0024455:9580-9599 Msa1417210:three_prime_UTR 30.0%
!! AAATGGATTATCAGGACAAA+TGG + tig0024455:9614-9633 Msa1417210:three_prime_UTR 30.0%
TCTGTTCTTTCTACTATACA+AGG + tig0024455:9642-9661 Msa1417210:three_prime_UTR 30.0%
!! AAGGTTAGTTTCAACAGATT+CGG - tig0024455:9815-9834 None:intergenic 30.0%
!!! AATGCTTGTTTTGGGTAAAA+AGG + tig0024455:9895-9914 Msa1417210:three_prime_UTR 30.0%
! TTTCACAATTGCATGTTTTG+CGG + tig0024455:9957-9976 Msa1417210:three_prime_UTR 30.0%
TTGAGTACATGGTTATTGAT+CGG + tig0024455:10038-10057 Msa1417210:three_prime_UTR 30.0%
AGTCTATGTTCAAAATCTAC+CGG - tig0024455:10139-10158 None:intergenic 30.0%
!! TCTGTTGTTGATTCGATAAT+TGG - tig0024455:10196-10215 None:intergenic 30.0%
TGTAAAAAATGCACTGTATG+CGG + tig0024455:10328-10347 Msa1417210:intron 30.0%
ATTGAAGTGGAAAAACTCAT+CGG - tig0024455:10548-10567 None:intergenic 30.0%
GGGAATGACTTCTAATTAAA+CGG + tig0024455:10605-10624 Msa1417210:three_prime_UTR 30.0%
TTCCCTCACATTAAACAAAT+AGG + tig0024455:10696-10715 Msa1417210:three_prime_UTR 30.0%
!! GTTGGATTGTTGTTTAGCAT+CGG - tig0024455:7643-7662 None:intergenic 35.0%
! GTTATGAAAATGGGTTTGGA+TGG - tig0024455:7750-7769 None:intergenic 35.0%
AGTTCCCGAATTGAAAGAAT+TGG + tig0024455:7803-7822 Msa1417210:five_prime_UTR 35.0%
TCTGATAGACGTGAAATGTA+TGG + tig0024455:7845-7864 Msa1417210:five_prime_UTR 35.0%
TCTTCAGCATAATAAGGTGA+TGG - tig0024455:7965-7984 None:intergenic 35.0%
! TGAAGAAGAGTATGTTGTTG+AGG + tig0024455:7979-7998 Msa1417210:five_prime_UTR 35.0%
!! AGACATGTTGTTTCGATTGT+TGG + tig0024455:8055-8074 Msa1417210:five_prime_UTR 35.0%
!! TGTTGTTTCGATTGTTGGTA+TGG + tig0024455:8060-8079 Msa1417210:five_prime_UTR 35.0%
! GTTGTTTCGATTGTTGGTAT+GGG + tig0024455:8061-8080 Msa1417210:five_prime_UTR 35.0%
!!! ATAATGTTTTGGCGGAGAAA+AGG + tig0024455:8283-8302 Msa1417210:CDS 35.0%
! TGGTTGTGCTTGATGATATT+TGG + tig0024455:8310-8329 Msa1417210:CDS 35.0%
! GGTTGTGCTTGATGATATTT+GGG + tig0024455:8311-8330 Msa1417210:CDS 35.0%
! GTTGTGCTTGATGATATTTG+GGG + tig0024455:8312-8331 Msa1417210:CDS 35.0%
! TTGTGCTTGATGATATTTGG+GGG + tig0024455:8313-8332 Msa1417210:CDS 35.0%
! TTAAATATGCTTTTCCGAGG+AGG + tig0024455:8355-8374 Msa1417210:CDS 35.0%
ATAGTGATCCTCATCAGTTA+AGG + tig0024455:8442-8461 Msa1417210:CDS 35.0%
ATGAGAGTTATGCGTTACTT+AGG + tig0024455:8478-8497 Msa1417210:CDS 35.0%
! TTATTTGGGTCTTTTCCCAA+AGG + tig0024455:8761-8780 Msa1417210:CDS 35.0%
! TATTTGGGTCTTTTCCCAAA+GGG + tig0024455:8762-8781 Msa1417210:CDS 35.0%
TCTGAATGTTCATACCCTTT+GGG - tig0024455:8779-8798 None:intergenic 35.0%
!! AGGTACTTGAATGAGTTGAT+TGG + tig0024455:8879-8898 Msa1417210:CDS 35.0%
!! ACTTGAATGAGTTGATTGGT+AGG + tig0024455:8883-8902 Msa1417210:CDS 35.0%
!! GTGTATGATTCAAGTTGGAA+CGG + tig0024455:8905-8924 Msa1417210:CDS 35.0%
!!! AGAGGAGTATTTTGGTGATA+TGG + tig0024455:9001-9020 Msa1417210:CDS 35.0%
AAGAATGTATAGAATGCCGA+CGG - tig0024455:9061-9080 None:intergenic 35.0%
CTATACATTCTTGCCATGAA+CGG + tig0024455:9069-9088 Msa1417210:CDS 35.0%
ACACTGAATTTAAGCTACTC+AGG + tig0024455:9224-9243 Msa1417210:three_prime_UTR 35.0%
CACTGAATTTAAGCTACTCA+GGG + tig0024455:9225-9244 Msa1417210:three_prime_UTR 35.0%
TGTTAGAATTAGACGGTGTT+CGG + tig0024455:9248-9267 Msa1417210:three_prime_UTR 35.0%
! TAGGGGAACTGATTCAATTA+AGG + tig0024455:9293-9312 Msa1417210:three_prime_UTR 35.0%
TTGAGAAAGACTAATCTCGA+AGG + tig0024455:9325-9344 Msa1417210:three_prime_UTR 35.0%
TGAGAAAGACTAATCTCGAA+GGG + tig0024455:9326-9345 Msa1417210:three_prime_UTR 35.0%
AGCAAATTTCCTATGGAAAG+CGG - tig0024455:9358-9377 None:intergenic 35.0%
!! ATATGGTAGGCTTTGAAGAT+TGG - tig0024455:9527-9546 None:intergenic 35.0%
TCAAAGCCTACCATATATTG+AGG + tig0024455:9531-9550 Msa1417210:three_prime_UTR 35.0%
AATGACCAATCTTAGGCAAT+TGG + tig0024455:9587-9606 Msa1417210:three_prime_UTR 35.0%
ATGACCAATCTTAGGCAATT+GGG + tig0024455:9588-9607 Msa1417210:three_prime_UTR 35.0%
!! TTGGGGATAAATGGATTATC+AGG + tig0024455:9606-9625 Msa1417210:three_prime_UTR 35.0%
ACTATCACTTCAATCTGAAG+AGG + tig0024455:9688-9707 Msa1417210:three_prime_UTR 35.0%
! TTTTGGCAATCTCTCAAGTT+TGG - tig0024455:9870-9889 None:intergenic 35.0%
TGGGTAAAAAGGCTTACAAT+TGG + tig0024455:9906-9925 Msa1417210:three_prime_UTR 35.0%
GGGTAAAAAGGCTTACAATT+GGG + tig0024455:9907-9926 Msa1417210:three_prime_UTR 35.0%
! AATTGAGTTTCAGTGCTGAA+GGG + tig0024455:9933-9952 Msa1417210:three_prime_UTR 35.0%
! TTCTGAAAGAATTGGAGGAA+TGG + tig0024455:9987-10006 Msa1417210:three_prime_UTR 35.0%
ATAACCATGTACTCAAGCAA+TGG - tig0024455:10034-10053 None:intergenic 35.0%
ACTAAAAATTACAGGCATGC+CGG + tig0024455:10117-10136 Msa1417210:three_prime_UTR 35.0%
GAAGATTACAAGCTGTACAA+TGG - tig0024455:10479-10498 None:intergenic 35.0%
TGCTATAATACAGTGACATC+AGG + tig0024455:10669-10688 Msa1417210:three_prime_UTR 35.0%
GAGGTTGAGTCAATTGAGTT+GGG - tig0024455:7457-7476 None:intergenic 40.0%
TGAGGTTGAGTCAATTGAGT+TGG - tig0024455:7458-7477 None:intergenic 40.0%
!! GGTTTTTGAGAGATTCGACT+TGG - tig0024455:7587-7606 None:intergenic 40.0%
GTTATCAGAAACCCTAACCA+TGG + tig0024455:7872-7891 Msa1417210:five_prime_UTR 40.0%
ATTGTTGGTATGGGTGGTTT+AGG + tig0024455:8070-8089 Msa1417210:five_prime_UTR 40.0%
GTGGTTTAGGAAAAACTACG+TGG + tig0024455:8083-8102 Msa1417210:five_prime_UTR 40.0%
! AGCTTGGGTTTATGTTTCTG+AGG + tig0024455:8155-8174 Msa1417210:five_prime_UTR 40.0%
! ATGTTTCTGAGGAGTATAGG+AGG + tig0024455:8166-8185 Msa1417210:five_prime_UTR 40.0%
! GTTTTGCAAGGGATTTTGAG+AGG + tig0024455:8195-8214 Msa1417210:five_prime_UTR 40.0%
!! TTTGGCGGAGAAAAGGTATT+TGG + tig0024455:8290-8309 Msa1417210:CDS 40.0%
! GGCTTAAATATGCTTTTCCG+AGG + tig0024455:8352-8371 Msa1417210:CDS 40.0%
! CTTTTCCGAGGAGGAAATTA+GGG + tig0024455:8364-8383 Msa1417210:CDS 40.0%
TTACTCCCTAATTTCCTCCT+CGG - tig0024455:8372-8391 None:intergenic 40.0%
! GTAAGATTTTGTTGACGACG+AGG + tig0024455:8388-8407 Msa1417210:CDS 40.0%
! TTTGTTGACGACGAGGATTT+TGG + tig0024455:8395-8414 Msa1417210:CDS 40.0%
! AGGTTGCTTTACATGCTGAT+GGG + tig0024455:8418-8437 Msa1417210:CDS 40.0%
! CTTAGGAGTAAAGCATTTCC+TGG + tig0024455:8495-8514 Msa1417210:CDS 40.0%
CTTGGCAAGATTCTCAAACT+CGG - tig0024455:8538-8557 None:intergenic 40.0%
ACATTTCACCACAATCTCCT+TGG - tig0024455:8556-8575 None:intergenic 40.0%
GAGATTGTGGTGAAATGTGA+AGG + tig0024455:8558-8577 Msa1417210:CDS 40.0%
TCTAGAAAGTTGAAGTCGAG+TGG + tig0024455:8618-8637 Msa1417210:CDS 40.0%
AGGGAGTTGCAGAATATTAG+AGG + tig0024455:8651-8670 Msa1417210:CDS 40.0%
GGGAGTTGCAGAATATTAGA+GGG + tig0024455:8652-8671 Msa1417210:CDS 40.0%
GGAGTTGCAGAATATTAGAG+GGG + tig0024455:8653-8672 Msa1417210:CDS 40.0%
GAGTTGCAGAATATTAGAGG+GGG + tig0024455:8654-8673 Msa1417210:CDS 40.0%
GTCTGAATGTTCATACCCTT+TGG - tig0024455:8780-8799 None:intergenic 40.0%
!!! GAAGGTTTTTTGCCTCAAGA+AGG + tig0024455:8828-8847 Msa1417210:CDS 40.0%
GGTAGGTGTATGATTCAAGT+TGG + tig0024455:8900-8919 Msa1417210:CDS 40.0%
! AAAGCTCTCTAAGAAGATCG+TGG - tig0024455:8965-8984 None:intergenic 40.0%
CGATCTTCTTAGAGAGCTTT+CGG + tig0024455:8965-8984 Msa1417210:CDS 40.0%
!!! GAGTATTTTGGTGATATGGC+AGG + tig0024455:9005-9024 Msa1417210:CDS 40.0%
AGAATGTATAGAATGCCGAC+GGG - tig0024455:9060-9079 None:intergenic 40.0%
! CTCAGGGTGTTAGAATTAGA+CGG + tig0024455:9241-9260 Msa1417210:three_prime_UTR 40.0%
!! TTAGCTTGCCAAGTACGATA+GGG + tig0024455:9275-9294 Msa1417210:three_prime_UTR 40.0%
CCATTTGATTCTCCAGATAG+CGG + tig0024455:9478-9497 Msa1417210:three_prime_UTR 40.0%
CATTTGATTCTCCAGATAGC+GGG + tig0024455:9479-9498 Msa1417210:three_prime_UTR 40.0%
TTCCAGCCTCAATATATGGT+AGG - tig0024455:9540-9559 None:intergenic 40.0%
CAGTTTCCAGCCTCAATATA+TGG - tig0024455:9544-9563 None:intergenic 40.0%
CATATATTGAGGCTGGAAAC+TGG + tig0024455:9542-9561 Msa1417210:three_prime_UTR 40.0%
TGACCAATCTTAGGCAATTG+GGG + tig0024455:9589-9608 Msa1417210:three_prime_UTR 40.0%
TATCCCCAATTGCCTAAGAT+TGG - tig0024455:9595-9614 None:intergenic 40.0%
CTTAGGCAATTGGGGATAAA+TGG + tig0024455:9597-9616 Msa1417210:three_prime_UTR 40.0%
! GTGATAGTGACAGTGAATGA+AGG - tig0024455:9676-9695 None:intergenic 40.0%
TGAGACAGCTGCATAAAGAT+TGG - tig0024455:9722-9741 None:intergenic 40.0%
CAAAGACAACTTCTGCAGTT+GGG - tig0024455:9750-9769 None:intergenic 40.0%
TCAAAGACAACTTCTGCAGT+TGG - tig0024455:9751-9770 None:intergenic 40.0%
CTGCAGAAGTTGTCTTTGAA+TGG + tig0024455:9752-9771 Msa1417210:three_prime_UTR 40.0%
TTAGTTTCAACAGATTCGGC+GGG - tig0024455:9811-9830 None:intergenic 40.0%
! GTTAGTTTCAACAGATTCGG+CGG - tig0024455:9812-9831 None:intergenic 40.0%
CTGTAGGTGGGAATTATGTA+AGG - tig0024455:9834-9853 None:intergenic 40.0%
ACATAATTCCCACCTACAGA+AGG + tig0024455:9835-9854 Msa1417210:three_prime_UTR 40.0%
AATAGACTCCTTCTGTAGGT+GGG - tig0024455:9846-9865 None:intergenic 40.0%
! GAATTGAGTTTCAGTGCTGA+AGG + tig0024455:9932-9951 Msa1417210:three_prime_UTR 40.0%
! GCTCACTCTTCTGAAAGAAT+TGG + tig0024455:9979-9998 Msa1417210:three_prime_UTR 40.0%
! CACTCTTCTGAAAGAATTGG+AGG + tig0024455:9982-10001 Msa1417210:three_prime_UTR 40.0%
ATTGGAGGAATGGAAAGTTG+AGG + tig0024455:9997-10016 Msa1417210:three_prime_UTR 40.0%
GGAATGGAAAGTTGAGGAAA+AGG + tig0024455:10003-10022 Msa1417210:three_prime_UTR 40.0%
AATGCCATTGCTTGAGTACA+TGG + tig0024455:10027-10046 Msa1417210:three_prime_UTR 40.0%
AAGCTGAGAAAGATTCCAGA+AGG + tig0024455:10067-10086 Msa1417210:three_prime_UTR 40.0%
AAAGATTCCAGAAGGACTGA+AGG + tig0024455:10075-10094 Msa1417210:three_prime_UTR 40.0%
AAAAAATGCACTGTATGCGG+AGG + tig0024455:10331-10350 Msa1417210:intron 40.0%
! TCATGCTGCAGATTGATTTC+CGG + tig0024455:10388-10407 Msa1417210:intron 40.0%
GTGATAGGAACTTACATCTG+AGG + tig0024455:10425-10444 Msa1417210:three_prime_UTR 40.0%
TAGGAACTTACATCTGAGGA+AGG + tig0024455:10429-10448 Msa1417210:three_prime_UTR 40.0%
AGGAACTTACATCTGAGGAA+GGG + tig0024455:10430-10449 Msa1417210:three_prime_UTR 40.0%
CGTACAAATTCCACAGACTA+TGG - tig0024455:10634-10653 None:intergenic 40.0%
ACTCAACCTCAAACCTTCGA+TGG + tig0024455:7467-7486 Msa1417210:five_prime_UTR 45.0%
GGCTATGTGAGAGATAGTTG+AGG - tig0024455:7553-7572 None:intergenic 45.0%
CAACGAACGTGTTCGTATGT+GGG + tig0024455:7659-7678 Msa1417210:five_prime_UTR 45.0%
GAAAGCGACGTTACGAATCT+CGG - tig0024455:7688-7707 None:intergenic 45.0%
TAGCGTTAGAGCCATGGTTA+GGG - tig0024455:7886-7905 None:intergenic 45.0%
TTAGCGTTAGAGCCATGGTT+AGG - tig0024455:7887-7906 None:intergenic 45.0%
CCAATGTCTCAATCTCTCGT+TGG - tig0024455:7936-7955 None:intergenic 45.0%
CCAACGAGAGATTGAGACAT+TGG + tig0024455:7933-7952 Msa1417210:five_prime_UTR 45.0%
GTTTCGATTGTTGGTATGGG+TGG + tig0024455:8064-8083 Msa1417210:five_prime_UTR 45.0%
! TTCTGAGGAGTATAGGAGGA+AGG + tig0024455:8170-8189 Msa1417210:five_prime_UTR 45.0%
! AGGAGGAAGGATGTTTTGCA+AGG + tig0024455:8183-8202 Msa1417210:five_prime_UTR 45.0%
! GGAGGAAGGATGTTTTGCAA+GGG + tig0024455:8184-8203 Msa1417210:five_prime_UTR 45.0%
!!! GGGATTTTGAGAGGTGTTGA+TGG + tig0024455:8204-8223 Msa1417210:five_prime_UTR 45.0%
TTATTCACCAACTCCTCCTC+CGG - tig0024455:8258-8277 None:intergenic 45.0%
! GCTTGATGATATTTGGGGGA+TGG + tig0024455:8317-8336 Msa1417210:CDS 45.0%
TGATGATATTTGGGGGATGG+AGG + tig0024455:8320-8339 Msa1417210:CDS 45.0%
ATATTTGGGGGATGGAGGTT+TGG + tig0024455:8325-8344 Msa1417210:CDS 45.0%
TATTTGGGGGATGGAGGTTT+GGG + tig0024455:8326-8345 Msa1417210:CDS 45.0%
! GCTTTTCCGAGGAGGAAATT+AGG + tig0024455:8363-8382 Msa1417210:CDS 45.0%
! GAGGTTGCTTTACATGCTGA+TGG + tig0024455:8417-8436 Msa1417210:CDS 45.0%
TTCAACGGCCTTAACTGATG+AGG - tig0024455:8453-8472 None:intergenic 45.0%
GCAAGATTCTCAAACTCGGA+TGG - tig0024455:8534-8553 None:intergenic 45.0%
CGAGTTTGAGAATCTTGCCA+AGG + tig0024455:8536-8555 Msa1417210:CDS 45.0%
GAATCTTGCCAAGGAGATTG+TGG + tig0024455:8545-8564 Msa1417210:CDS 45.0%
!! TTTGCCTCTTGCTGTTGTTG+TGG + tig0024455:8581-8600 Msa1417210:CDS 45.0%
AGTTGAAGTCGAGTGGAGAA+TGG + tig0024455:8625-8644 Msa1417210:CDS 45.0%
GTTGAAGTCGAGTGGAGAAT+GGG + tig0024455:8626-8645 Msa1417210:CDS 45.0%
AAACACGATTTCAACGGCGA+AGG - tig0024455:8738-8757 None:intergenic 45.0%
ATTAGACTATGGGTCGCTGA+AGG + tig0024455:8810-8829 Msa1417210:CDS 45.0%
!!! GGTTTTTTGCCTCAAGAAGG+TGG + tig0024455:8831-8850 Msa1417210:CDS 45.0%
TTCGGTCACCAAAGGAAAAG+AGG + tig0024455:8983-9002 Msa1417210:CDS 45.0%
CTCAGCTAACTAAATCCCGT+CGG + tig0024455:9042-9061 Msa1417210:CDS 45.0%
!! GTTAGCTTGCCAAGTACGAT+AGG + tig0024455:9274-9293 Msa1417210:three_prime_UTR 45.0%
! TAGCTTGCCAAGTACGATAG+GGG + tig0024455:9276-9295 Msa1417210:three_prime_UTR 45.0%
ATCAGTTCCCCTATCGTACT+TGG - tig0024455:9286-9305 None:intergenic 45.0%
CCGCTATCTGGAGAATCAAA+TGG - tig0024455:9481-9500 None:intergenic 45.0%
AGCCTACCATATATTGAGGC+TGG + tig0024455:9535-9554 Msa1417210:three_prime_UTR 45.0%
GCTGGAAACTGGATATCAGA+TGG + tig0024455:9553-9572 Msa1417210:three_prime_UTR 45.0%
GGAAACTGGATATCAGATGG+CGG + tig0024455:9556-9575 Msa1417210:three_prime_UTR 45.0%
CAATAGACTCCTTCTGTAGG+TGG - tig0024455:9847-9866 None:intergenic 45.0%
TGGCAATAGACTCCTTCTGT+AGG - tig0024455:9850-9869 None:intergenic 45.0%
GTGATATCCTTCAGTCCTTC+TGG - tig0024455:10085-10104 None:intergenic 45.0%
GTATGCGGAGGCAATACTTT+CGG + tig0024455:10343-10362 Msa1417210:intron 45.0%
!! AGGGAAGCATCTTCAAGTTC+TGG + tig0024455:10449-10468 Msa1417210:three_prime_UTR 45.0%
TAAACGGTTGCCATAGTCTG+TGG + tig0024455:10621-10640 Msa1417210:three_prime_UTR 45.0%
!! GTTTAGCATCGGCGTCTTTG+AGG - tig0024455:7632-7651 None:intergenic 50.0%
CCACATACGAACACGTTCGT+TGG - tig0024455:7661-7680 None:intergenic 50.0%
CCAACGAACGTGTTCGTATG+TGG + tig0024455:7658-7677 Msa1417210:five_prime_UTR 50.0%
TGCTACCATCACGGTCATCA+GGG - tig0024455:7910-7929 None:intergenic 50.0%
!! AGGTGTTGATGGTGTTGCGA+GGG + tig0024455:8215-8234 Msa1417210:five_prime_UTR 50.0%
TTGCGAGGGAGGATATGGAT+AGG + tig0024455:8229-8248 Msa1417210:exon 50.0%
GGAGGATATGGATAGGATGC+CGG + tig0024455:8236-8255 Msa1417210:exon 50.0%
! GTTGACGACGAGGATTTTGG+AGG + tig0024455:8398-8417 Msa1417210:CDS 50.0%
CCAACCACAACAACAGCAAG+AGG - tig0024455:8588-8607 None:intergenic 50.0%
!! CCTCTTGCTGTTGTTGTGGT+TGG + tig0024455:8585-8604 Msa1417210:CDS 50.0%
!! CTTGCTGTTGTTGTGGTTGG+TGG + tig0024455:8588-8607 Msa1417210:CDS 50.0%
GCAGTTTCACCACCTTCTTG+AGG - tig0024455:8843-8862 None:intergenic 50.0%
CTGCAGAAGATGTTGCTCAG+AGG + tig0024455:8859-8878 Msa1417210:CDS 50.0%
AGTTGGAACGGTGAGTTCGT+TGG + tig0024455:8917-8936 Msa1417210:CDS 50.0%
GTTGGAACGGTGAGTTCGTT+GGG + tig0024455:8918-8937 Msa1417210:CDS 50.0%
TTGGAACGGTGAGTTCGTTG+GGG + tig0024455:8919-8938 Msa1417210:CDS 50.0%
AGAGAGCTTTCGGTCACCAA+AGG + tig0024455:8975-8994 Msa1417210:CDS 50.0%
GGGAAACTTCCGCTTTCCAT+AGG + tig0024455:9346-9365 Msa1417210:three_prime_UTR 50.0%
! ATTTCCGGCGCAGTGTTGTT+GGG + tig0024455:10403-10422 Msa1417210:three_prime_UTR 50.0%
CCTCTGCCATCGAAGGTTTG+AGG - tig0024455:7476-7495 None:intergenic 55.0%
CCTCAAACCTTCGATGGCAG+AGG + tig0024455:7473-7492 Msa1417210:five_prime_UTR 55.0%
ACTGCTACCTCTGCCATCGA+AGG - tig0024455:7483-7502 None:intergenic 55.0%
!! TTCGACTTGGTCGCGAACTG+TGG - tig0024455:7574-7593 None:intergenic 55.0%
! CAGGGTTAGCGTTAGAGCCA+TGG - tig0024455:7892-7911 None:intergenic 55.0%
GCTAACCCTGATGACCGTGA+TGG + tig0024455:7902-7921 Msa1417210:five_prime_UTR 55.0%
CTGCTACCATCACGGTCATC+AGG - tig0024455:7911-7930 None:intergenic 55.0%
CGTTGGCACTGCTACCATCA+CGG - tig0024455:7919-7938 None:intergenic 55.0%
!! GAGGTGTTGATGGTGTTGCG+AGG + tig0024455:8214-8233 Msa1417210:five_prime_UTR 55.0%
!! TGTTGATGGTGTTGCGAGGG+AGG + tig0024455:8218-8237 Msa1417210:five_prime_UTR 55.0%
!! TGGTGTTGCGAGGGAGGATA+TGG + tig0024455:8224-8243 Msa1417210:exon 55.0%
GGATATGGATAGGATGCCGG+AGG + tig0024455:8239-8258 Msa1417210:exon 55.0%
TATGGATAGGATGCCGGAGG+AGG + tig0024455:8242-8261 Msa1417210:exon 55.0%
GATGGTATCACACTCGCACC+AGG - tig0024455:8516-8535 None:intergenic 55.0%
! AGTCGAGTGGAGAATGGGCT+AGG + tig0024455:8631-8650 Msa1417210:CDS 55.0%
!! GTCGAGTGGAGAATGGGCTA+GGG + tig0024455:8632-8651 Msa1417210:CDS 55.0%
!! CTCCAGATAGCGGGCATCTA+CGG + tig0024455:9488-9507 Msa1417210:three_prime_UTR 55.0%
AACCGTAGATGCCCGCTATC+TGG - tig0024455:9493-9512 None:intergenic 55.0%
!! AGATAGCGGGCATCTACGGT+TGG + tig0024455:9492-9511 Msa1417210:three_prime_UTR 55.0%
AGATTCGGCGGGAACTCATG+TGG - tig0024455:9800-9819 None:intergenic 55.0%
GATTTCCGGCGCAGTGTTGT+TGG + tig0024455:10402-10421 Msa1417210:three_prime_UTR 55.0%
ATCACCCAACAACACTGCGC+CGG - tig0024455:10410-10429 None:intergenic 55.0%
! GCGCAGTGTTGTTGGGTGAT+AGG + tig0024455:10410-10429 Msa1417210:three_prime_UTR 55.0%
TAGGATGCCGGAGGAGGAGT+TGG + tig0024455:8248-8267 Msa1417210:CDS 60.0%
TGGGGGATGGAGGTTTGGGA+TGG + tig0024455:8330-8349 Msa1417210:CDS 60.0%
! GGGGGATGGAGGTTTGGGAT+GGG + tig0024455:8331-8350 Msa1417210:CDS 60.0%
GGCGGGAACTCATGTGGATC+AGG - tig0024455:9794-9813 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0024455 gene 7356 10765 7356 ID=Msa1417210;Name=Msa1417210
tig0024455 mRNA 7356 10765 7356 ID=Msa1417210-mRNA-1;Parent=Msa1417210;Name=Msa1417210-mRNA-1;_AED=0.00;_eAED=0.00;_QI=887|1|1|1|0|0.5|2|1382|323
tig0024455 exon 7356 10229 7356 ID=Msa1417210-mRNA-1:exon:23286;Parent=Msa1417210-mRNA-1
tig0024455 exon 10399 10765 10399 ID=Msa1417210-mRNA-1:exon:23287;Parent=Msa1417210-mRNA-1
tig0024455 five_prime_UTR 7356 8242 7356 ID=Msa1417210-mRNA-1:five_prime_utr;Parent=Msa1417210-mRNA-1
tig0024455 CDS 8243 9214 8243 ID=Msa1417210-mRNA-1:cds;Parent=Msa1417210-mRNA-1
tig0024455 three_prime_UTR 9215 10229 9215 ID=Msa1417210-mRNA-1:three_prime_utr;Parent=Msa1417210-mRNA-1
tig0024455 three_prime_UTR 10399 10765 10399 ID=Msa1417210-mRNA-1:three_prime_utr;Parent=Msa1417210-mRNA-1
Gene Sequence

>Msa1417210

ATGGATAGGATGCCGGAGGAGGAGTTGGTGAATAAGCTTCATAATGTTTTGGCGGAGAAAAGGTATTTGGTTGTGCTTGATGATATTTGGGGGATGGAGGTTTGGGATGGGCTTAAATATGCTTTTCCGAGGAGGAAATTAGGGAGTAAGATTTTGTTGACGACGAGGATTTTGGAGGTTGCTTTACATGCTGATGGGAATAGTGATCCTCATCAGTTAAGGCCGTTGAATCATGATGAGAGTTATGCGTTACTTAGGAGTAAAGCATTTCCTGGTGCGAGTGTGATACCATCCGAGTTTGAGAATCTTGCCAAGGAGATTGTGGTGAAATGTGAAGGTTTGCCTCTTGCTGTTGTTGTGGTTGGTGGTTTGTTGTCTAGAAAGTTGAAGTCGAGTGGAGAATGGGCTAGGGAGTTGCAGAATATTAGAGGGGGTTTGCTTGAAGATCAAGAGAAGATAACAAGAATTTTAGCATTGAGCTATAATGAATTGCCTTCGCCGTTGAAATCGTGTTTTCTTTATTTGGGTCTTTTCCCAAAGGGTATGAACATTCAGACAAAAAAATTGATTAGACTATGGGTCGCTGAAGGTTTTTTGCCTCAAGAAGGTGGTGAAACTGCAGAAGATGTTGCTCAGAGGTACTTGAATGAGTTGATTGGTAGGTGTATGATTCAAGTTGGAACGGTGAGTTCGTTGGGGAGAGTTAAGACGATTCGAATCCACGATCTTCTTAGAGAGCTTTCGGTCACCAAAGGAAAAGAGGAGTATTTTGGTGATATGGCAGGCTCATCATCAACATCTCAGCTAACTAAATCCCGTCGGCATTCTATACATTCTTGCCATGAACGGTATGATTTCTTAAAACATATTGCAGATTATTCGCGTTCATTGCTGTTCTTCAATAGAGAATATAATGCAGATATAGACAAGAAAGTTTGGATTCATTTGAGTTTTATGCAAGAAAAAAATTGA
Protein sequence

>Msa1417210

MDRMPEEELVNKLHNVLAEKRYLVVLDDIWGMEVWDGLKYAFPRRKLGSKILLTTRILEVALHADGNSDPHQLRPLNHDESYALLRSKAFPGASVIPSEFENLAKEIVVKCEGLPLAVVVVGGLLSRKLKSSGEWARELQNIRGGLLEDQEKITRILALSYNELPSPLKSCFLYLGLFPKGMNIQTKKLIRLWVAEGFLPQEGGETAEDVAQRYLNELIGRCMIQVGTVSSLGRVKTIRIHDLLRELSVTKGKEEYFGDMAGSSSTSQLTKSRRHSIHSCHERYDFLKHIADYSRSLLFFNREYNADIDKKVWIHLSFMQEKN*