AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0095560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095560 MtrunA17_Chr1g0183871 96.898 548 17 0 1 548 61 608 0.0 1074
Msa0095560 MtrunA17_Chr4g0020351 73.704 540 140 2 10 548 655 1193 0.0 776
Msa0095560 MtrunA17_Chr8g0370091 27.079 517 296 17 64 543 739 1211 1.34e-35 142
Msa0095560 MtrunA17_Chr7g0257431 38.889 126 64 2 418 543 4 116 2.88e-26 104
Msa0095560 MtrunA17_Chr1g0178211 79.710 69 14 0 1 69 1 69 8.51e-22 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095560 AT3G54670.1 71.111 540 154 2 10 548 665 1203 0.0 765
Msa0095560 AT5G48600.1 25.898 529 321 16 36 543 740 1218 1.99e-38 151
Msa0095560 AT5G48600.2 25.382 524 333 15 36 543 740 1221 1.01e-37 149
Msa0095560 AT2G27170.2 38.043 92 46 2 451 542 1096 1176 3.69e-11 66.6
Msa0095560 AT2G27170.1 38.043 92 46 2 451 542 1096 1176 3.69e-11 66.6

Find 169 sgRNAs with CRISPR-Local

Find 851 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCACTCCAGCTTAAAATTT+TGG 0.104224 1_3:+829327 None:intergenic
TGGTCCAATGCCTTCAAATT+TGG 0.217676 1_3:+823883 None:intergenic
TAACTTTGCTTCAGCCTCTT+TGG 0.247867 1_3:+824656 None:intergenic
TGTTGCTATGGGTAAATTAA+TGG 0.248301 1_3:-832051 Msa0095560:five_prime_UTR
TGGAGTGGGGAGAGGTTTAA+AGG 0.258361 1_3:-829313 Msa0095560:intron
ACGTTTAATTTCTTCTTTGA+TGG 0.266942 1_3:+826314 None:intergenic
TTATTCCTCTACAATCTATT+CGG 0.267468 1_3:-830616 Msa0095560:five_prime_UTR
AAGCCTTCTTCTTCCATTCC+TGG 0.271888 1_3:+824283 None:intergenic
GCTTTGGAGATTGATTTAAA+AGG 0.277689 1_3:-824687 Msa0095560:CDS
TGATAGTTCTGCAAAGAATA+AGG 0.282527 1_3:-832456 Msa0095560:five_prime_UTR
AAGCGTTAGTTGGGGTTTAC+AGG 0.284648 1_3:-821675 Msa0095560:CDS
TGGAACAGCATACCTAAATT+TGG 0.296683 1_3:-822596 Msa0095560:CDS
AACCTTGATGCATTCCTTCC+CGG 0.307385 1_3:+832001 None:intergenic
ATGGAAAGATTACGCTCATT+AGG 0.308521 1_3:-830581 Msa0095560:five_prime_UTR
TATCTATATTACCAGCGATA+TGG 0.316547 1_3:+822662 None:intergenic
CAGTTAAAAGATGAAGTTAA+AGG 0.318877 1_3:-824603 Msa0095560:intron
GCTAATCAAACGATTAAGTT+TGG 0.319627 1_3:+824239 None:intergenic
TAGTGAAGCTCAAAATAATT+TGG 0.320111 1_3:-832564 Msa0095560:five_prime_UTR
AATGTCACCTTCTTCAGTTC+TGG 0.335942 1_3:+826285 None:intergenic
TTGAATGTTGCAAAGGTTGC+TGG 0.339404 1_3:-821811 Msa0095560:CDS
TGGAAAGATTACGCTCATTA+GGG 0.341275 1_3:-830580 Msa0095560:five_prime_UTR
ATTGTAGAGGAATAAAAGTC+TGG 0.344397 1_3:+830624 None:intergenic
CTTTGGAGATTGATTTAAAA+GGG 0.348704 1_3:-824686 Msa0095560:CDS
TATTCGGGTGAAGCAAATAA+TGG 0.369785 1_3:-830600 Msa0095560:five_prime_UTR
GCACAGATTGAGCAGTTGAT+TGG 0.371721 1_3:-824126 Msa0095560:CDS
GGAATCTTCCCTAAGTGCTT+TGG 0.375873 1_3:-824703 Msa0095560:CDS
TATTCCTCTACAATCTATTC+GGG 0.387357 1_3:-830615 Msa0095560:five_prime_UTR
TCAGTAGAACACTAAAAGAT+AGG 0.405647 1_3:-823987 Msa0095560:CDS
ATCAATCTCCAAAGCACTTA+GGG 0.408663 1_3:+824695 None:intergenic
GGTTGGAGTATGAACAAAAT+CGG 0.411606 1_3:-824752 Msa0095560:CDS
AGGTTATACTTCTTCTGTGT+TGG 0.412906 1_3:+832083 None:intergenic
AGCTTATCAAAGTCAAATAC+TGG 0.417548 1_3:+824009 None:intergenic
TCCATAGGATCTTGTATGAT+TGG 0.417956 1_3:+824054 None:intergenic
CAGGATGCTGATGCCGGATC+TGG 0.418635 1_3:-821748 Msa0095560:CDS
TACTTCATGCCATGTAGAAA+TGG 0.419004 1_3:+822559 None:intergenic
AAGAATTCAGCAAGTCAGTT+GGG 0.419124 1_3:-826108 Msa0095560:CDS
ACAAAGCTGAAGCGTTAGTT+GGG 0.423474 1_3:-821684 Msa0095560:CDS
TGAAGGAGCAAGGACTAATC+AGG 0.426310 1_3:-821767 Msa0095560:CDS
AATCAATCTCCAAAGCACTT+AGG 0.431614 1_3:+824694 None:intergenic
CACAGATTGAGCAGTTGATT+GGG 0.432034 1_3:-824125 Msa0095560:CDS
AGCACCAAATTTGAAGGCAT+TGG 0.436906 1_3:-823887 Msa0095560:CDS
ATGTCGCGGAACCGCTTTGT+TGG 0.437758 1_3:+822523 None:intergenic
AAAGAGCAACACACATCCTC+TGG 0.440601 1_3:-822620 Msa0095560:CDS
ACAAAATCCGGCACAATGAC+TGG 0.443039 1_3:-828396 Msa0095560:exon
ATGCAGATATGATTTGTTCA+TGG 0.443391 1_3:-822695 Msa0095560:intron
CTTTACTTCATTAAATCTAT+CGG 0.445320 1_3:+823783 None:intergenic
CGCGACATGGAACAACTATC+TGG 0.448520 1_3:-822508 Msa0095560:CDS
CTGAAGAGTTTGAAGCTGTC+AGG 0.450671 1_3:-823825 Msa0095560:CDS
GACAAAGCTGAAGCGTTAGT+TGG 0.453493 1_3:-821685 Msa0095560:CDS
CCTAGCCGTTACTGTTGCTA+TGG 0.454329 1_3:-832063 Msa0095560:five_prime_UTR
AGAGGAGTATGAGTCGGAGT+TGG 0.455130 1_3:-828150 Msa0095560:CDS
GAGTTCACGAATTCAAGAAT+TGG 0.455951 1_3:-824724 Msa0095560:CDS
TCCAATCATACAAGATCCTA+TGG 0.458111 1_3:-824055 Msa0095560:CDS
ACTCTGAAACGCTTGTTTCA+AGG 0.461803 1_3:-832137 Msa0095560:five_prime_UTR
TTTCAAGCAGAGCCTCATAC+TGG 0.465956 1_3:+823863 None:intergenic
AAGAACAGCACCAAATTTGA+AGG 0.466719 1_3:-823893 Msa0095560:CDS
GAGTATGAGTCGGAGTTGGA+AGG 0.467781 1_3:-828146 Msa0095560:CDS
GAAGGCATTGGACCAGTATG+AGG 0.474336 1_3:-823875 Msa0095560:CDS
TCGCGGAACCGCTTTGTTGG+TGG 0.475592 1_3:+822526 None:intergenic
GGAGGCTGAGCTGGATTCAC+AGG 0.480872 1_3:-832513 Msa0095560:five_prime_UTR
TGGGATGACAAGATACTTGA+AGG 0.487149 1_3:-828336 Msa0095560:intron
TATTACAGAAAAGAGGAAGC+TGG 0.488460 1_3:-832647 Msa0095560:five_prime_UTR
AGGAAAAGCAGATGCGAGAA+AGG 0.489340 1_3:-832493 Msa0095560:five_prime_UTR
CGCTTGTTTCAAGGAGTCCA+TGG 0.490083 1_3:-832128 Msa0095560:five_prime_UTR
ATCTTGTTATTACAGAAAAG+AGG 0.491058 1_3:-832654 Msa0095560:five_prime_UTR
TGATCAGTTGTAACCGTGGA+TGG 0.493604 1_3:-828429 Msa0095560:intron
GTCGCATGACTGATCTTTGT+AGG 0.495789 1_3:-832106 Msa0095560:five_prime_UTR
GAGAGATGCTAAATTGTCTC+AGG 0.496661 1_3:-832168 Msa0095560:five_prime_UTR
TTGTAGAGGAATAAAAGTCT+GGG 0.498054 1_3:+830625 None:intergenic
TAATCGTTTGATTAGCTCAA+AGG 0.504453 1_3:-824232 Msa0095560:intron
AAGAATAAGGATGAAGTTGA+AGG 0.505111 1_3:-832443 Msa0095560:five_prime_UTR
GTGCAAGTTTGATCCCTCCT+TGG 0.509487 1_3:-829406 Msa0095560:intron
AAGTTTGGCTAAGCTTGTTG+TGG 0.511536 1_3:+824254 None:intergenic
CGTTGCTGTTCTCCATCCAC+AGG 0.511915 1_3:-822459 Msa0095560:intron
GGATCGTGAAAAGGAAATCC+AGG 0.514092 1_3:-824301 Msa0095560:CDS
ATCTGACAGGGGTAAAATAG+AGG 0.514488 1_3:-823959 Msa0095560:CDS
TGCTAAATTGTCTCAGGCTG+TGG 0.514757 1_3:-832162 Msa0095560:five_prime_UTR
AAGATAGGAGACAATCTGAC+AGG 0.515528 1_3:-823972 Msa0095560:CDS
AGAGTCAGAGGATCGTGAAA+AGG 0.516330 1_3:-824310 Msa0095560:CDS
TCAATATGCTGAGATTGAAA+AGG 0.520480 1_3:-828048 Msa0095560:intron
AACAAAGCGGTTCCGCGACA+TGG 0.521116 1_3:-822521 Msa0095560:CDS
GCAGTTGATTGGGCAAAAGC+AGG 0.521763 1_3:-824115 Msa0095560:CDS
GTGAATCCAGCTCAGCCTCC+CGG 0.522144 1_3:+832516 None:intergenic
AGTATGAGTCGGAGTTGGAA+GGG 0.524040 1_3:-828145 Msa0095560:CDS
TTAATGAAGTAAAGCAGAAG+AGG 0.525670 1_3:-823774 Msa0095560:intron
ACTAATCAGGATGCTGATGC+CGG 0.528971 1_3:-821754 Msa0095560:CDS
GTTTGATCCCTCCTTGGAGA+AGG 0.534498 1_3:-829400 Msa0095560:five_prime_UTR
TAAGAGATGCTGTTGAAAAG+AGG 0.535560 1_3:-826189 Msa0095560:CDS
AATACTCTGAAAACCAGATC+CGG 0.539223 1_3:+821735 None:intergenic
ATTACAGAAAAGAGGAAGCT+GGG 0.540319 1_3:-832646 Msa0095560:five_prime_UTR
TAGGATCTTGTATGATTGGA+AGG 0.540726 1_3:+824058 None:intergenic
CAAAATCTTGTGAAGGAGCA+AGG 0.545040 1_3:-821777 Msa0095560:CDS
GGATGAAGTTGATGCTGCAT+TGG 0.545341 1_3:-821839 Msa0095560:CDS
AAAGAATTCAGCAAGTCAGT+TGG 0.546638 1_3:-826109 Msa0095560:CDS
ATTCGTTCAAAATCTTGTGA+AGG 0.547590 1_3:-821784 Msa0095560:CDS
GGATACTGATACTTCAACAC+CGG 0.551459 1_3:-824034 Msa0095560:CDS
TGTCAGCAAAATTCCATCCA+CGG 0.552959 1_3:+828416 None:intergenic
ATTAATGGATGCAGTTGTTG+TGG 0.554838 1_3:-832036 Msa0095560:five_prime_UTR
AGCTGTCAGGAAAGAAGAGA+AGG 0.559426 1_3:-823812 Msa0095560:CDS
GTTTACAGGGACTCTGAAAG+AGG 0.559697 1_3:-821661 Msa0095560:CDS
AGCGTTAGTTGGGGTTTACA+GGG 0.560955 1_3:-821674 Msa0095560:CDS
GTTGGAGTATGAACAAAATC+GGG 0.564376 1_3:-824751 Msa0095560:CDS
CAAATAACTCTACCTGTGGA+TGG 0.565775 1_3:+822447 None:intergenic
AAGGCAATTCTATTTGCTGT+GGG 0.566259 1_3:-829381 Msa0095560:five_prime_UTR
GAAGGCAATTCTATTTGCTG+TGG 0.566789 1_3:-829382 Msa0095560:five_prime_UTR
GGAAAGATTACGCTCATTAG+GGG 0.567576 1_3:-830579 Msa0095560:five_prime_UTR
TACAGTATTTAAAAGAGCAG+AGG 0.572634 1_3:-830655 Msa0095560:intron
CTAGCCGTTACTGTTGCTAT+GGG 0.575663 1_3:-832062 Msa0095560:five_prime_UTR
AAATAAACTACGTGATCTGA+AGG 0.578223 1_3:-832210 Msa0095560:five_prime_UTR
GACCGGGAAGGAATGCATCA+AGG 0.578231 1_3:-832003 Msa0095560:intron
GAGGCTTTCAACCATATCGC+TGG 0.578366 1_3:-822673 Msa0095560:CDS
AATCCAGGAATGGAAGAAGA+AGG 0.582014 1_3:-824286 Msa0095560:CDS
TATTAGTCCAGAACTGAAGA+AGG 0.582986 1_3:-826292 Msa0095560:intron
CGTTAAAGAGTCTGAAACAG+AGG 0.585640 1_3:-828099 Msa0095560:CDS
TGGTGGCACTAGTGGTGGAA+TGG 0.586320 1_3:-828376 Msa0095560:CDS
TGGAAGCAAGGTCAAAACAG+TGG 0.587810 1_3:-828356 Msa0095560:CDS
GTTGAAGTATCAGTATCCAT+AGG 0.591631 1_3:+824039 None:intergenic
AGAGTGGAAATCAGAGTCAG+AGG 0.591783 1_3:-824322 Msa0095560:CDS
GTGAAAAGGAAATCCAGGAA+TGG 0.594108 1_3:-824296 Msa0095560:CDS
AAAGAAAGAGGAGTATGAGT+CGG 0.594381 1_3:-828156 Msa0095560:CDS
GGAATGGAAGAAGAAGGCTT+CGG 0.594610 1_3:-824280 Msa0095560:CDS
AGAATTCAGCAAGTCAGTTG+GGG 0.596182 1_3:-826107 Msa0095560:CDS
GAGTCGGAGTTGGAAGGGAT+AGG 0.599821 1_3:-828140 Msa0095560:CDS
GGACAACTTGAATGTTGCAA+AGG 0.602237 1_3:-821818 Msa0095560:CDS
AGAATTGCCTTCTCCAAGGA+GGG 0.602678 1_3:+829393 None:intergenic
GGAAGCAAGGTCAAAACAGT+GGG 0.604509 1_3:-828355 Msa0095560:CDS
AAGAGCAACACACATCCTCT+GGG 0.604669 1_3:-822619 Msa0095560:CDS
AATTACATACTCTTGAGAAG+AGG 0.608234 1_3:-826159 Msa0095560:CDS
TCAAAGTCAAATACTGGACC+CGG 0.608317 1_3:+824015 None:intergenic
CAGATATGATTTGTTCATGG+AGG 0.608916 1_3:-822692 Msa0095560:CDS
AAAGATCAGTCATGCGACCA+TGG 0.609399 1_3:+832111 None:intergenic
GTTGTGGAGGATGAAAAGAC+CGG 0.615119 1_3:-832020 Msa0095560:five_prime_UTR
AAATAGAATTGCCTTCTCCA+AGG 0.616702 1_3:+829389 None:intergenic
CAAAGCTGAAGCGTTAGTTG+GGG 0.618753 1_3:-821683 Msa0095560:CDS
CCATAGCAACAGTAACGGCT+AGG 0.618882 1_3:+832063 None:intergenic
TTTGGAGATTGATTTAAAAG+GGG 0.619795 1_3:-824685 Msa0095560:CDS
AGATAGGAGACAATCTGACA+GGG 0.623128 1_3:-823971 Msa0095560:CDS
AGTGCCACCAGTCATTGTGC+CGG 0.624864 1_3:+828389 None:intergenic
GTATGAAGAAAATCGACTCA+AGG 0.625177 1_3:-826068 Msa0095560:CDS
GGATAAATGAAATCACTGAT+CGG 0.625816 1_3:-826138 Msa0095560:CDS
AATGGATGCAGTTGTTGTGG+AGG 0.626198 1_3:-832033 Msa0095560:five_prime_UTR
ACAATGACTGGTGGCACTAG+TGG 0.629660 1_3:-828384 Msa0095560:CDS
CAGATAGTTGTTCCATGTCG+CGG 0.630799 1_3:+822509 None:intergenic
AGAGGAATAAAAGTCTGGGG+AGG 0.631587 1_3:+830629 None:intergenic
TTGTGGAGGATGAAAAGACC+GGG 0.631915 1_3:-832019 Msa0095560:five_prime_UTR
CTAGTGGTGGAATGGAAGCA+AGG 0.633127 1_3:-828368 Msa0095560:CDS
TTTACCCATAGCAACAGTAA+CGG 0.634873 1_3:+832058 None:intergenic
TTTACAGGGACTCTGAAAGA+GGG 0.636295 1_3:-821660 Msa0095560:CDS
ATGACTGGTGGCACTAGTGG+TGG 0.639638 1_3:-828381 Msa0095560:CDS
TTCACCCGAATAGATTGTAG+AGG 0.639788 1_3:+830611 None:intergenic
TGTAGAGGAATAAAAGTCTG+GGG 0.642356 1_3:+830626 None:intergenic
GTTAAAGAGTCTGAAACAGA+GGG 0.643343 1_3:-828098 Msa0095560:CDS
GAAGACGATCCATTTCTACA+TGG 0.649820 1_3:-822568 Msa0095560:CDS
AGGTATGCTGTTCCACCCAG+AGG 0.651199 1_3:+822604 None:intergenic
TAGAATTGCCTTCTCCAAGG+AGG 0.651510 1_3:+829392 None:intergenic
GATACTGATACTTCAACACC+GGG 0.653562 1_3:-824033 Msa0095560:CDS
GAAAACCGCAAAGCTTAGAG+AGG 0.654199 1_3:-832621 Msa0095560:five_prime_UTR
TCTTGTTTGTGAAGACCTCG+AGG 0.667156 1_3:-829353 Msa0095560:five_prime_UTR
GAAAGATTACGCTCATTAGG+GGG 0.676897 1_3:-830578 Msa0095560:five_prime_UTR
AAATCCGGCACAATGACTGG+TGG 0.678062 1_3:-828393 Msa0095560:exon
TAAACTACGTGATCTGAAGG+CGG 0.679083 1_3:-832207 Msa0095560:five_prime_UTR
GACATGGAACAACTATCTGG+CGG 0.679578 1_3:-822505 Msa0095560:CDS
GGAGGATGAAAAGACCGGGA+AGG 0.683783 1_3:-832015 Msa0095560:five_prime_UTR
CTGCTATGCCACCAACAAAG+CGG 0.697445 1_3:-822534 Msa0095560:CDS
AGCAACACACATCCTCTGGG+TGG 0.698547 1_3:-822616 Msa0095560:CDS
AAAAGGGGTACAGACCAAAG+AGG 0.706218 1_3:-824670 Msa0095560:CDS
GATAGGAGACAATCTGACAG+GGG 0.715726 1_3:-823970 Msa0095560:CDS
AATTTGATCAGTTGTAACCG+TGG 0.723134 1_3:-828433 Msa0095560:intron
TTAAAGAGTCTGAAACAGAG+GGG 0.771288 1_3:-828097 Msa0095560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATATATATATAATTT+AGG - chr1_3:826089-826108 Msa0095560:CDS 0.0%
!! TATATAAAAATAAAATAAAA+GGG + chr1_3:828912-828931 None:intergenic 0.0%
!! ATATATAAAAATAAAATAAA+AGG + chr1_3:828913-828932 None:intergenic 0.0%
!!! TAAAGTTTTGAAAAATAAAA+TGG + chr1_3:822372-822391 None:intergenic 10.0%
!!! TGTTATATTATTTTTTTCAA+AGG - chr1_3:823471-823490 Msa0095560:intron 10.0%
!! TAATAATATAATAATTGTTC+TGG - chr1_3:826321-826340 Msa0095560:CDS 10.0%
!! TATTAATTGATATACATAAA+TGG - chr1_3:827408-827427 Msa0095560:intron 10.0%
!! ATAAATCTATAATTTACTAA+AGG + chr1_3:828940-828959 None:intergenic 10.0%
!!! TTTTTTTTATTTACTTGAAT+AGG - chr1_3:831534-831553 Msa0095560:intron 10.0%
!! AAGAAATTTATTACTTTATA+CGG + chr1_3:832131-832150 None:intergenic 10.0%
!!! TAAACCAAAAATAATTTGTA+GGG + chr1_3:824302-824321 None:intergenic 15.0%
!!! ATAGTATTTCAAAATTTTAC+AGG - chr1_3:824343-824362 Msa0095560:intron 15.0%
!! ACATATCTTTATTACTTAAA+GGG - chr1_3:825306-825325 Msa0095560:intron 15.0%
!! AATTAGATATATCAAACAAT+CGG - chr1_3:827143-827162 Msa0095560:intron 15.0%
!! AGAAGTAAGATAAAATAAAA+GGG + chr1_3:827376-827395 None:intergenic 15.0%
!! TAGAAGTAAGATAAAATAAA+AGG + chr1_3:827377-827396 None:intergenic 15.0%
!! AAGTATTAAGATCTAAATAT+GGG + chr1_3:827675-827694 None:intergenic 15.0%
!!! GGAATATTTGAATTTTATTT+TGG - chr1_3:827919-827938 Msa0095560:intron 15.0%
!! TTCAAATTGCTATATTATTT+CGG - chr1_3:828589-828608 Msa0095560:intron 15.0%
!! AAGAATAAATAATAACTAGT+TGG + chr1_3:829497-829516 None:intergenic 15.0%
!! ATCGTAATTAAATATTGATA+AGG - chr1_3:831455-831474 Msa0095560:intron 15.0%
!! CATTCAACATATAAATAAAA+AGG + chr1_3:831606-831625 None:intergenic 15.0%
!!! TTTTTTACCTTTATTCATAA+AGG - chr1_3:831956-831975 Msa0095560:intron 15.0%
!!! TTTTTACCTTTATTCATAAA+GGG - chr1_3:831957-831976 Msa0095560:intron 15.0%
!!! TTGAACAATAATATTTTAGA+TGG - chr1_3:832306-832325 Msa0095560:intron 15.0%
!! ATCTTCAACAATTAAAAAAC+CGG - chr1_3:821783-821802 Msa0095560:CDS 20.0%
!!! TTAAGCAACATTGATTAATT+TGG + chr1_3:823087-823106 None:intergenic 20.0%
!! AAGGCTAAATGTAATTATTT+AGG + chr1_3:823301-823320 None:intergenic 20.0%
!! TATAAAAAAGCCAAAGAAAT+AGG + chr1_3:823447-823466 None:intergenic 20.0%
!! ATATAATTGTTACTGTTGAA+AGG - chr1_3:823499-823518 Msa0095560:intron 20.0%
!! TTGAAGTTCTATATATTGAT+TGG - chr1_3:823615-823634 Msa0095560:intron 20.0%
!! AATAGAGGATGAAAAAAAAA+TGG + chr1_3:823869-823888 None:intergenic 20.0%
!! CATTTATATTTCCAAAACTT+TGG + chr1_3:823902-823921 None:intergenic 20.0%
!! TCAAAATAGATATATAAACG+AGG + chr1_3:824080-824099 None:intergenic 20.0%
!! AACAATTGCAGTAAATAAAA+AGG + chr1_3:824263-824282 None:intergenic 20.0%
!!! GTAAACCAAAAATAATTTGT+AGG + chr1_3:824303-824322 None:intergenic 20.0%
!! AAATACTATCTAAATTTAGC+AGG + chr1_3:824332-824351 None:intergenic 20.0%
!!! ATATAAATGTCTGTTTTTGT+TGG - chr1_3:824398-824417 Msa0095560:intron 20.0%
!! ACAGAAGATAAAACATAAAT+CGG + chr1_3:824566-824585 None:intergenic 20.0%
!! TTAAAAACTGCATCTAAATA+GGG + chr1_3:824632-824651 None:intergenic 20.0%
!! TTTAAAAACTGCATCTAAAT+AGG + chr1_3:824633-824652 None:intergenic 20.0%
!! TATTAGTGGAATATCTTTAT+AGG + chr1_3:824723-824742 None:intergenic 20.0%
!!! ATGAAGTATTCATATAAAAG+GGG + chr1_3:824798-824817 None:intergenic 20.0%
!!! GATGAAGTATTCATATAAAA+GGG + chr1_3:824799-824818 None:intergenic 20.0%
!! CACATATCTTTATTACTTAA+AGG - chr1_3:825305-825324 Msa0095560:intron 20.0%
!! CATATCTTTATTACTTAAAG+GGG - chr1_3:825307-825326 Msa0095560:intron 20.0%
!! CGAAATAACTAAGTAAAAAT+AGG - chr1_3:825658-825677 Msa0095560:intron 20.0%
!! TAACTAAGTAAAAATAGGTA+CGG - chr1_3:825663-825682 Msa0095560:intron 20.0%
!!! AATGTTCAATAATTTGCATT+CGG + chr1_3:825856-825875 None:intergenic 20.0%
!! ATTTCATTATATCATAAGTG+TGG + chr1_3:827075-827094 None:intergenic 20.0%
!! ACACTTATGATATAATGAAA+TGG - chr1_3:827074-827093 Msa0095560:intron 20.0%
!! AATATAAATTGCTAATGATG+TGG - chr1_3:827332-827351 Msa0095560:intron 20.0%
!! ATATAAATTGCTAATGATGT+GGG - chr1_3:827333-827352 Msa0095560:intron 20.0%
!! GAAGTAAGATAAAATAAAAG+GGG + chr1_3:827375-827394 None:intergenic 20.0%
!! AGTATTAAGATCTAAATATG+GGG + chr1_3:827674-827693 None:intergenic 20.0%
!!! GAAGTATTAAGATCTAAATA+TGG + chr1_3:827676-827695 None:intergenic 20.0%
!! TAAAATTCAAATATTCCAAG+AGG + chr1_3:827916-827935 None:intergenic 20.0%
!! TAAACAATAAGTAACAAGTT+CGG + chr1_3:828098-828117 None:intergenic 20.0%
!!! GATATTTTAATTTCGAAAGT+TGG + chr1_3:828316-828335 None:intergenic 20.0%
!! TCAAATTGCTATATTATTTC+GGG - chr1_3:828590-828609 Msa0095560:intron 20.0%
!! ATAGTTAGTAGTATCATTTA+CGG - chr1_3:829192-829211 Msa0095560:intron 20.0%
!! TAAATTGAAAACACTAAATG+AGG - chr1_3:829351-829370 Msa0095560:five_prime_UTR 20.0%
!! CTTTACTTCATTAAATCTAT+CGG + chr1_3:830538-830557 None:intergenic 20.0%
!!! ATTAAACTTCTAAGAAGATT+GGG + chr1_3:831354-831373 None:intergenic 20.0%
!!! AATTAAACTTCTAAGAAGAT+TGG + chr1_3:831355-831374 None:intergenic 20.0%
!! TTAGAAAAAGAAGTTATAAC+CGG + chr1_3:832048-832067 None:intergenic 20.0%
!!! TTAGATGGTTGTTTAAATTT+TGG - chr1_3:832321-832340 Msa0095560:intron 20.0%
!!! TAGATGGTTGTTTAAATTTT+GGG - chr1_3:832322-832341 Msa0095560:intron 20.0%
!!! TTGCTTATATTTTCAGTTTT+AGG - chr1_3:832436-832455 Msa0095560:five_prime_UTR 20.0%
!!! ATCTTGTTATTACAGAAAAG+AGG - chr1_3:821664-821683 Msa0095560:CDS 25.0%
! TAGTGAAGCTCAAAATAATT+TGG - chr1_3:821754-821773 Msa0095560:CDS 25.0%
! TCTTCAACAATTAAAAAACC+GGG - chr1_3:821784-821803 Msa0095560:CDS 25.0%
!!! GAATAACAAGTTGATTTACT+TGG + chr1_3:821945-821964 None:intergenic 25.0%
! GACAACTTGAAGATAAAAAT+TGG - chr1_3:822076-822095 Msa0095560:intron 25.0%
! AAAATAAAATGGCACAAACT+AGG + chr1_3:822361-822380 None:intergenic 25.0%
! AGTGAATAAACTCAGAAAAA+AGG - chr1_3:822491-822510 Msa0095560:CDS 25.0%
! TAGAGAACCATTAATAAGTA+TGG - chr1_3:822522-822541 Msa0095560:CDS 25.0%
! ACGAGCAAAAATAAAAAAGA+TGG - chr1_3:822783-822802 Msa0095560:intron 25.0%
! AGCCATAAAATCGAAAAAAA+TGG - chr1_3:822816-822835 Msa0095560:intron 25.0%
! GCCATAAAATCGAAAAAAAT+GGG - chr1_3:822817-822836 Msa0095560:intron 25.0%
!!! ACCCATTTTTTTCGATTTTA+TGG + chr1_3:822821-822840 None:intergenic 25.0%
!! TAATCAATGTTGCTTAATGA+TGG - chr1_3:823090-823109 Msa0095560:intron 25.0%
! TCCTATATAGATACATTACT+AGG + chr1_3:823142-823161 None:intergenic 25.0%
!! TATAGGAACACAAATTTTGA+TGG - chr1_3:823155-823174 Msa0095560:intron 25.0%
!!! TTTTGATGGACTTCAAAATA+AGG - chr1_3:823169-823188 Msa0095560:intron 25.0%
!! CTTTTCTATGTAATTCTTTG+AGG - chr1_3:823526-823545 Msa0095560:intron 25.0%
! TAGAACTTCAAAGTTAAAAC+AGG + chr1_3:823606-823625 None:intergenic 25.0%
! TTATTCCTCTACAATCTATT+CGG - chr1_3:823702-823721 Msa0095560:intron 25.0%
!! CAATATCCTTATTTAACTAG+TGG - chr1_3:823791-823810 Msa0095560:CDS 25.0%
! AAGTAACCACTAGTTAAATA+AGG + chr1_3:823800-823819 None:intergenic 25.0%
!!! TTTGGTAATGGAAAAAATAG+AGG + chr1_3:823884-823903 None:intergenic 25.0%
!! TTTTTCCATTACCAAAGTTT+TGG - chr1_3:823888-823907 Msa0095560:CDS 25.0%
! TATTTCCAAAACTTTGGTAA+TGG + chr1_3:823896-823915 None:intergenic 25.0%
!!! TCCATTACTATAGTTTTGAA+GGG + chr1_3:823973-823992 None:intergenic 25.0%
!!! AAATTTGAAGCTTTTGTAGA+CGG + chr1_3:824034-824053 None:intergenic 25.0%
! TCAAACAATAAAGTCTTGAA+GGG + chr1_3:824126-824145 None:intergenic 25.0%
! ATCAAACAATAAAGTCTTGA+AGG + chr1_3:824127-824146 None:intergenic 25.0%
! TTCAAGACTTTATTGTTTGA+TGG - chr1_3:824126-824145 Msa0095560:CDS 25.0%
!! TTCTCCCTACAAATTATTTT+TGG - chr1_3:824295-824314 Msa0095560:CDS 25.0%
! TTTCATCAAATGCTATTGTA+CGG - chr1_3:824678-824697 Msa0095560:CDS 25.0%
! CTGTAGTTAAAATCTATTAG+TGG + chr1_3:824737-824756 None:intergenic 25.0%
!! CGATGAAGTATTCATATAAA+AGG + chr1_3:824800-824819 None:intergenic 25.0%
!!! AACACTTTTAAGTTCACTAT+AGG + chr1_3:824871-824890 None:intergenic 25.0%
! TACAGATATTTATAATCCCT+AGG + chr1_3:825161-825180 None:intergenic 25.0%
! TATTACTTAAAGGGGATATA+TGG - chr1_3:825315-825334 Msa0095560:intron 25.0%
! CAACACATCAAAAAATTTCA+AGG + chr1_3:825434-825453 None:intergenic 25.0%
!! TTTTGATGAAAATAGTAGAG+GGG + chr1_3:825580-825599 None:intergenic 25.0%
!! CTTTTGATGAAAATAGTAGA+GGG + chr1_3:825581-825600 None:intergenic 25.0%
!! CATCAAAAGCAAGATAATTT+TGG - chr1_3:825592-825611 Msa0095560:intron 25.0%
! ACAACTGATCAAATTACATA+TGG + chr1_3:825880-825899 None:intergenic 25.0%
! TAAACCTAAAATCTTTCCTT+CGG + chr1_3:826835-826854 None:intergenic 25.0%
! AATCAAAACAAAAACACTAG+AGG + chr1_3:826886-826905 None:intergenic 25.0%
!!! CTTCTTCATTTTAGAGTTTT+TGG + chr1_3:827100-827119 None:intergenic 25.0%
!! TCTAAAATGAAGAAGCTTAA+CGG - chr1_3:827105-827124 Msa0095560:intron 25.0%
! TTTAGATCTTAATACTTCAC+AGG - chr1_3:827678-827697 Msa0095560:intron 25.0%
! TTAGATCTTAATACTTCACA+GGG - chr1_3:827679-827698 Msa0095560:intron 25.0%
! TTGGATTATGACTTTATTGT+TGG - chr1_3:827758-827777 Msa0095560:intron 25.0%
!! ACGTTTAATTTCTTCTTTGA+TGG + chr1_3:828007-828026 None:intergenic 25.0%
! ATACTGCTATGAATAAACAA+AGG + chr1_3:828066-828085 None:intergenic 25.0%
! GAGAGATGATTAGAAAAAAT+GGG + chr1_3:828354-828373 None:intergenic 25.0%
! AAATCGGAGAAAATAATCTT+TGG - chr1_3:828479-828498 Msa0095560:intron 25.0%
! CAAATTGCTATATTATTTCG+GGG - chr1_3:828591-828610 Msa0095560:intron 25.0%
! TAGTATATATTTCACCTTAG+AGG - chr1_3:828728-828747 Msa0095560:intron 25.0%
! AGTATATATTTCACCTTAGA+GGG - chr1_3:828729-828748 Msa0095560:intron 25.0%
!!! AAATGGTTTTGTTGTGATTT+TGG - chr1_3:828993-829012 Msa0095560:intron 25.0%
! CCTGAAGAATAATTTCAATA+AGG + chr1_3:829548-829567 None:intergenic 25.0%
! CCTTATTGAAATTATTCTTC+AGG - chr1_3:829545-829564 Msa0095560:intron 25.0%
! ATTGAAATTATTCTTCAGGT+TGG - chr1_3:829549-829568 Msa0095560:intron 25.0%
!! CTTTGGAGATTGATTTAAAA+GGG - chr1_3:829632-829651 Msa0095560:intron 25.0%
!! TTTGGAGATTGATTTAAAAG+GGG - chr1_3:829633-829652 Msa0095560:intron 25.0%
! CAGTTAAAAGATGAAGTTAA+AGG - chr1_3:829715-829734 Msa0095560:intron 25.0%
!! GTTTACCATTTGAAATAAAC+AGG - chr1_3:829866-829885 Msa0095560:intron 25.0%
! ACAAATAATGACAAAGTGAA+AGG + chr1_3:830585-830604 None:intergenic 25.0%
! AAAAAAAATGATACCCTAGT+TGG + chr1_3:830828-830847 None:intergenic 25.0%
!!! TTTTTTTTTGAGCAAGAACT+TGG - chr1_3:830841-830860 Msa0095560:intron 25.0%
!!! TTTTTTTTGAGCAAGAACTT+GGG - chr1_3:830842-830861 Msa0095560:intron 25.0%
! TTTCATTTATCAATGCCTTA+TGG + chr1_3:831113-831132 None:intergenic 25.0%
! GCTTAAAATAAAACCTATGA+CGG + chr1_3:831234-831253 None:intergenic 25.0%
!!! TGAGTGATTATTTTGTAACA+AGG - chr1_3:831374-831393 Msa0095560:intron 25.0%
!! TTTTAAATGGGACCATATTA+GGG + chr1_3:831986-832005 None:intergenic 25.0%
!! TTTTTAAATGGGACCATATT+AGG + chr1_3:831987-832006 None:intergenic 25.0%
! TAATATGGTCCCATTTAAAA+AGG - chr1_3:831986-832005 Msa0095560:intron 25.0%
! AGAAAACAAGGTAAAAACAA+TGG + chr1_3:832243-832262 None:intergenic 25.0%
!! ATCTTTGAAAACAGAAAACA+AGG + chr1_3:832255-832274 None:intergenic 25.0%
! TTTGCCTAAAAATAGTTTGA+TGG - chr1_3:832377-832396 Msa0095560:intron 25.0%
!!! ATCTCCATCAAACTATTTTT+AGG + chr1_3:832384-832403 None:intergenic 25.0%
! AAAATAGTTTGATGGAGATT+TGG - chr1_3:832385-832404 Msa0095560:intron 25.0%
! AAACTGAAAATATAAGCAAG+TGG + chr1_3:832435-832454 None:intergenic 25.0%
AGGAAAAAGAACTTCTAGAT+AGG - chr1_3:821717-821736 Msa0095560:CDS 30.0%
! TGATAGTTCTGCAAAGAATA+AGG - chr1_3:821862-821881 Msa0095560:CDS 30.0%
AAGAATAAGGATGAAGTTGA+AGG - chr1_3:821875-821894 Msa0095560:intron 30.0%
AAATAAACTACGTGATCTGA+AGG - chr1_3:822108-822127 Msa0095560:intron 30.0%
TGTTGCTATGGGTAAATTAA+TGG - chr1_3:822267-822286 Msa0095560:intron 30.0%
AGAACCATTAATAAGTATGG+TGG - chr1_3:822525-822544 Msa0095560:CDS 30.0%
!! ATCGAAAAAAATGGGTTAGA+AGG - chr1_3:822825-822844 Msa0095560:intron 30.0%
ATTTGGTCATCACAGTAATA+GGG + chr1_3:823070-823089 None:intergenic 30.0%
AATTTGGTCATCACAGTAAT+AGG + chr1_3:823071-823090 None:intergenic 30.0%
TTACTAGGCCTATTATAACA+TGG + chr1_3:823127-823146 None:intergenic 30.0%
GCCTAGTAATGTATCTATAT+AGG - chr1_3:823138-823157 Msa0095560:intron 30.0%
TGTGTAACAATACAAGATGT+AGG - chr1_3:823397-823416 Msa0095560:intron 30.0%
GTGTAACAATACAAGATGTA+GGG - chr1_3:823398-823417 Msa0095560:intron 30.0%
TACAGTATTTAAAAGAGCAG+AGG - chr1_3:823663-823682 Msa0095560:intron 30.0%
TTGTAGAGGAATAAAAGTCT+GGG + chr1_3:823696-823715 None:intergenic 30.0%
ATTGTAGAGGAATAAAAGTC+TGG + chr1_3:823697-823716 None:intergenic 30.0%
TATTCCTCTACAATCTATTC+GGG - chr1_3:823703-823722 Msa0095560:intron 30.0%
! TTTAACTAGTGGTTACTTTG+AGG - chr1_3:823802-823821 Msa0095560:CDS 30.0%
! TTAACTAGTGGTTACTTTGA+GGG - chr1_3:823803-823822 Msa0095560:CDS 30.0%
AGGATGAAAAAAAAATGGAG+AGG + chr1_3:823864-823883 None:intergenic 30.0%
TAAATGCAATGATGTGCATT+TGG - chr1_3:823916-823935 Msa0095560:CDS 30.0%
ACCCTTCAAAACTATAGTAA+TGG - chr1_3:823969-823988 Msa0095560:CDS 30.0%
!!! CTCCATTACTATAGTTTTGA+AGG + chr1_3:823974-823993 None:intergenic 30.0%
! TCAAAACTATAGTAATGGAG+AGG - chr1_3:823974-823993 Msa0095560:CDS 30.0%
! CAAAACTATAGTAATGGAGA+GGG - chr1_3:823975-823994 Msa0095560:CDS 30.0%
!! AATTTGAAGCTTTTGTAGAC+GGG + chr1_3:824033-824052 None:intergenic 30.0%
! CAATTCGAAAAAGCACAAAA+AGG - chr1_3:824205-824224 Msa0095560:intron 30.0%
! AAAAAGCACAAAAAGGTGAT+AGG - chr1_3:824212-824231 Msa0095560:intron 30.0%
TAGTGAGAACAATGTACTAA+TGG + chr1_3:824530-824549 None:intergenic 30.0%
!! GATTTGATTTTAGTGAGCTA+TGG + chr1_3:824605-824624 None:intergenic 30.0%
! GCTTTTGATGAAAATAGTAG+AGG + chr1_3:825582-825601 None:intergenic 30.0%
AAGTAAAAATAGGTACGGTT+CGG - chr1_3:825668-825687 Msa0095560:intron 30.0%
AGGATTCTCAAAATGCAAAA+GGG + chr1_3:825794-825813 None:intergenic 30.0%
TAGGATTCTCAAAATGCAAA+AGG + chr1_3:825795-825814 None:intergenic 30.0%
!! AACTTTGCATTCTGTTTTTC+AGG - chr1_3:826130-826149 Msa0095560:CDS 30.0%
AGGATATGTCAAAAAGAAAG+AGG - chr1_3:826150-826169 Msa0095560:CDS 30.0%
TCAATATGCTGAGATTGAAA+AGG - chr1_3:826270-826289 Msa0095560:intron 30.0%
! AGCTTGTTTCATTTATTGTG+TGG - chr1_3:826400-826419 Msa0095560:intron 30.0%
TATGTGTTTCACAATCAGAT+GGG - chr1_3:826455-826474 Msa0095560:intron 30.0%
!!! TGTGGTTTTGTTGAGAATAA+TGG - chr1_3:826480-826499 Msa0095560:intron 30.0%
! GAGAATAATGGAATACTTTC+TGG - chr1_3:826492-826511 Msa0095560:intron 30.0%
AAACCTAAAATCTTTCCTTC+GGG + chr1_3:826834-826853 None:intergenic 30.0%
! TTTAGGTTTAAAGCGAGAAT+TGG - chr1_3:826845-826864 Msa0095560:intron 30.0%
! TTAGGTTTAAAGCGAGAATT+GGG - chr1_3:826846-826865 Msa0095560:intron 30.0%
AAACAAAAACACTAGAGGTA+GGG + chr1_3:826881-826900 None:intergenic 30.0%
AAAACAAAAACACTAGAGGT+AGG + chr1_3:826882-826901 None:intergenic 30.0%
!!! GTGTTTTTGTTTTGATTTGC+CGG - chr1_3:826889-826908 Msa0095560:intron 30.0%
TGGGATTCACAATATAGATT+TGG + chr1_3:826987-827006 None:intergenic 30.0%
!! AAGCTTAACGGATTTAAGAT+TGG - chr1_3:827117-827136 Msa0095560:intron 30.0%
TATGCAATAGAACGAAAACT+CGG + chr1_3:827608-827627 None:intergenic 30.0%
AATCTGGGAAGATTTCTAAA+TGG + chr1_3:827641-827660 None:intergenic 30.0%
ATTTAGAAATCTTCCCAGAT+TGG - chr1_3:827640-827659 Msa0095560:intron 30.0%
TCCTCCATATTTAATCACAT+AGG - chr1_3:827722-827741 Msa0095560:intron 30.0%
TCCTATGTGATTAAATATGG+AGG + chr1_3:827726-827745 None:intergenic 30.0%
CTCTCCTATGTGATTAAATA+TGG + chr1_3:827729-827748 None:intergenic 30.0%
TTATGATACTATTCAGTGCT+TGG - chr1_3:827783-827802 Msa0095560:intron 30.0%
!!! TCTTTTTGTTTTTGCATCTG+TGG - chr1_3:827816-827835 Msa0095560:intron 30.0%
GAGAAATCACTAATGAAGAA+AGG + chr1_3:827882-827901 None:intergenic 30.0%
!! TTCAATGCTTTTCTGGTAAA+AGG + chr1_3:827950-827969 None:intergenic 30.0%
! GTTTATCTTCAATGCTTTTC+TGG + chr1_3:827957-827976 None:intergenic 30.0%
!! TTCAGATTTTAGTCGTGAAA+AGG - chr1_3:827978-827997 Msa0095560:intron 30.0%
!! TCAGATTTTAGTCGTGAAAA+GGG - chr1_3:827979-827998 Msa0095560:intron 30.0%
AATTACATACTCTTGAGAAG+AGG - chr1_3:828159-828178 Msa0095560:CDS 30.0%
GGATAAATGAAATCACTGAT+CGG - chr1_3:828180-828199 Msa0095560:intron 30.0%
GATTAGAAAAAATGGGAAGA+AGG + chr1_3:828347-828366 None:intergenic 30.0%
GGAGAGATGATTAGAAAAAA+TGG + chr1_3:828355-828374 None:intergenic 30.0%
! GTAAGTATTGTGTAATGCAT+AGG + chr1_3:828399-828418 None:intergenic 30.0%
! ATAATCTTTGGAAGCAAATG+AGG - chr1_3:828491-828510 Msa0095560:intron 30.0%
TATTAAGTTCTACCTAGTCT+AGG - chr1_3:828535-828554 Msa0095560:intron 30.0%
! TGTTATTTGTCCCATTTAAG+TGG - chr1_3:828663-828682 Msa0095560:intron 30.0%
! ACAGTCTTTTGTGTAAAATC+AGG - chr1_3:828819-828838 Msa0095560:intron 30.0%
! CAGTCTTTTGTGTAAAATCA+GGG - chr1_3:828820-828839 Msa0095560:intron 30.0%
!!! TTTTAACTTGCTTGATTGGT+GGG + chr1_3:829053-829072 None:intergenic 30.0%
!!! TTTTTAACTTGCTTGATTGG+TGG + chr1_3:829054-829073 None:intergenic 30.0%
!!! GCTTTTTTAACTTGCTTGAT+TGG + chr1_3:829057-829076 None:intergenic 30.0%
! CAAGTTAAAAAAGCATGATG+TGG - chr1_3:829063-829082 Msa0095560:intron 30.0%
GAGAGAAAAAAAGTAACTAG+AGG - chr1_3:829120-829139 Msa0095560:intron 30.0%
GTATCATTTACGGTTTAACT+TGG - chr1_3:829202-829221 Msa0095560:intron 30.0%
!! GACTGACTATTTCTATTTGA+TGG + chr1_3:829276-829295 None:intergenic 30.0%
AAAAGTTAAGAGACATGAGT+AGG + chr1_3:829309-829328 None:intergenic 30.0%
ATCATCGCTGTAAAATGAAA+CGG + chr1_3:829382-829401 None:intergenic 30.0%
!! GCTTTGGAGATTGATTTAAA+AGG - chr1_3:829631-829650 Msa0095560:intron 30.0%
TGCAACAAAATACAATGATG+AGG + chr1_3:829754-829773 None:intergenic 30.0%
GTGTTCCTGTTTATTTCAAA+TGG + chr1_3:829874-829893 None:intergenic 30.0%
CGGAAAATTGAAATGATGAT+GGG + chr1_3:829923-829942 None:intergenic 30.0%
ACGGAAAATTGAAATGATGA+TGG + chr1_3:829924-829943 None:intergenic 30.0%
GCTAATCAAACGATTAAGTT+TGG + chr1_3:830082-830101 None:intergenic 30.0%
! TAATCGTTTGATTAGCTCAA+AGG - chr1_3:830086-830105 Msa0095560:intron 30.0%
! ATTATGCATGAAAGTACACA+CGG + chr1_3:830135-830154 None:intergenic 30.0%
AGCTTATCAAAGTCAAATAC+TGG + chr1_3:830312-830331 None:intergenic 30.0%
TCAGTAGAACACTAAAAGAT+AGG - chr1_3:830331-830350 Msa0095560:intron 30.0%
GGTAGACTTTAAGCAAAAAA+TGG - chr1_3:830380-830399 Msa0095560:intron 30.0%
TAAGCAAAAAATGGATGCAT+TGG - chr1_3:830389-830408 Msa0095560:intron 30.0%
TTAATGAAGTAAAGCAGAAG+AGG - chr1_3:830544-830563 Msa0095560:intron 30.0%
TGTTTGCTTATTGTTTAGTG+AGG - chr1_3:830896-830915 Msa0095560:intron 30.0%
ATGGCAATCGTTAAAAAATC+CGG + chr1_3:831008-831027 None:intergenic 30.0%
!!! TTAGATTATTTTGACAGGCA+AGG + chr1_3:831204-831223 None:intergenic 30.0%
TTGCCTGTCAAAATAATCTA+AGG - chr1_3:831203-831222 Msa0095560:intron 30.0%
AAATAAAACCTATGACGGTT+AGG + chr1_3:831229-831248 None:intergenic 30.0%
! TCAACATATAAGCTTGTTCA+GGG + chr1_3:831426-831445 None:intergenic 30.0%
! TTCAACATATAAGCTTGTTC+AGG + chr1_3:831427-831446 None:intergenic 30.0%
TGATAAGGTCAATGAACATA+TGG - chr1_3:831470-831489 Msa0095560:intron 30.0%
!! ATGCAGATATGATTTGTTCA+TGG - chr1_3:831623-831642 Msa0095560:intron 30.0%
! CGTCTTCATTTTCCAAATTT+AGG + chr1_3:831737-831756 None:intergenic 30.0%
!! TCTTTCTAGTTGAGCATATT+TGG - chr1_3:831914-831933 Msa0095560:intron 30.0%
TTTAAATGGGACCATATTAG+GGG + chr1_3:831985-832004 None:intergenic 30.0%
TATAGCAGGTACGATATAAT+GGG + chr1_3:832024-832043 None:intergenic 30.0%
TAATCTTATCTTTGTGCAAC+TGG - chr1_3:832065-832084 Msa0095560:five_prime_UTR 30.0%
AATCTTATCTTTGTGCAACT+GGG - chr1_3:832066-832085 Msa0095560:five_prime_UTR 30.0%
!!! CAATGGATGGTTTTATGATT+GGG + chr1_3:832226-832245 None:intergenic 30.0%
!!! ACAATGGATGGTTTTATGAT+TGG + chr1_3:832227-832246 None:intergenic 30.0%
AACAAGGTAAAAACAATGGA+TGG + chr1_3:832239-832258 None:intergenic 30.0%
ACTTCATCCAGTATGAAAAA+TGG + chr1_3:832468-832487 None:intergenic 30.0%
ATTCGTTCAAAATCTTGTGA+AGG - chr1_3:832534-832553 Msa0095560:five_prime_UTR 30.0%
TATTACAGAAAAGAGGAAGC+TGG - chr1_3:821671-821690 Msa0095560:CDS 35.0%
ATTACAGAAAAGAGGAAGCT+GGG - chr1_3:821672-821691 Msa0095560:CDS 35.0%
! TTTTTCCTCTCTAAGCTTTG+CGG + chr1_3:821705-821724 None:intergenic 35.0%
TCAACAATTAAAAAACCGGG+AGG - chr1_3:821787-821806 Msa0095560:CDS 35.0%
AATGAAGACTGTAATGCAGT+AGG + chr1_3:822004-822023 None:intergenic 35.0%
AGGTTATACTTCTTCTGTGT+TGG + chr1_3:822238-822257 None:intergenic 35.0%
TTTACCCATAGCAACAGTAA+CGG + chr1_3:822263-822282 None:intergenic 35.0%
! ATTAATGGATGCAGTTGTTG+TGG - chr1_3:822282-822301 Msa0095560:intron 35.0%
AATGGCACAAACTAGGATAT+GGG + chr1_3:822354-822373 None:intergenic 35.0%
AAATGGCACAAACTAGGATA+TGG + chr1_3:822355-822374 None:intergenic 35.0%
GATGCCACCATACTTATTAA+TGG + chr1_3:822532-822551 None:intergenic 35.0%
TATTATAACATGGACCACAG+TGG + chr1_3:823117-823136 None:intergenic 35.0%
ACTGTGGTCCATGTTATAAT+AGG - chr1_3:823116-823135 Msa0095560:intron 35.0%
AAAGCCCAAACATGAAACTA+GGG - chr1_3:823227-823246 Msa0095560:intron 35.0%
AAAGCCCTAGTTTCATGTTT+GGG + chr1_3:823234-823253 None:intergenic 35.0%
ACGAAAAGGCAACAAAATGT+AGG + chr1_3:823269-823288 None:intergenic 35.0%
GTCATTGCAACTAAAGAGAT+GGG + chr1_3:823350-823369 None:intergenic 35.0%
TGTCATTGCAACTAAAGAGA+TGG + chr1_3:823351-823370 None:intergenic 35.0%
AGAAATAGGAAGTGACGTAT+AGG + chr1_3:823433-823452 None:intergenic 35.0%
! TACGTCACTTCCTATTTCTT+TGG - chr1_3:823434-823453 Msa0095560:intron 35.0%
! TAGCTTTTCAGCAGTTACAT+AGG + chr1_3:823554-823573 None:intergenic 35.0%
CTGCTGAAAAGCTATATCTT+TGG - chr1_3:823560-823579 Msa0095560:intron 35.0%
TGTAGAGGAATAAAAGTCTG+GGG + chr1_3:823695-823714 None:intergenic 35.0%
TATTCGGGTGAAGCAAATAA+TGG - chr1_3:823718-823737 Msa0095560:intron 35.0%
ATGGAAAGATTACGCTCATT+AGG - chr1_3:823737-823756 Msa0095560:intron 35.0%
TGGAAAGATTACGCTCATTA+GGG - chr1_3:823738-823757 Msa0095560:intron 35.0%
! ATAGTAATGGAGAGGGAAAA+TGG - chr1_3:823982-824001 Msa0095560:CDS 35.0%
AATGGAGAGACAAAATGGAA+AGG - chr1_3:824000-824019 Msa0095560:CDS 35.0%
AAAGGTAAATAGTGTACCGA+TGG + chr1_3:824245-824264 None:intergenic 35.0%
AAATAGAATTGCCTTCTCCA+AGG + chr1_3:824932-824951 None:intergenic 35.0%
!! AAGGCAATTCTATTTGCTGT+GGG - chr1_3:824937-824956 Msa0095560:intron 35.0%
!!! TTAAAATTTTGGCTTCCTCG+AGG + chr1_3:824983-825002 None:intergenic 35.0%
! AGGAAGCCAAAATTTTAAGC+TGG - chr1_3:824985-825004 Msa0095560:intron 35.0%
! CCAAAATTTTAAGCTGGAGT+GGG - chr1_3:824991-825010 Msa0095560:intron 35.0%
! CAAAATTTTAAGCTGGAGTG+GGG - chr1_3:824992-825011 Msa0095560:intron 35.0%
! AGTTCTAACCTATGATGCAT+AGG - chr1_3:825465-825484 Msa0095560:intron 35.0%
TAACCTATGATGCATAGGTA+CGG - chr1_3:825470-825489 Msa0095560:intron 35.0%
! CTTAGTTATTTCGTCGTAGT+TGG + chr1_3:825651-825670 None:intergenic 35.0%
ATTCTCAAAATGCAAAAGGG+TGG + chr1_3:825791-825810 None:intergenic 35.0%
AATTTGATCAGTTGTAACCG+TGG - chr1_3:825885-825904 Msa0095560:intron 35.0%
! GGAATTTTGCTGACAAAATC+CGG - chr1_3:825910-825929 Msa0095560:intron 35.0%
! AAAGAAAGAGGAGTATGAGT+CGG - chr1_3:826162-826181 Msa0095560:CDS 35.0%
! GTTAAAGAGTCTGAAACAGA+GGG - chr1_3:826220-826239 Msa0095560:intron 35.0%
! TTAAAGAGTCTGAAACAGAG+GGG - chr1_3:826221-826240 Msa0095560:intron 35.0%
GTCACACAAAAAACCTTCAA+AGG + chr1_3:826364-826383 None:intergenic 35.0%
GTATGTGTTTCACAATCAGA+TGG - chr1_3:826454-826473 Msa0095560:intron 35.0%
ATGTGTTTCACAATCAGATG+GGG - chr1_3:826456-826475 Msa0095560:intron 35.0%
! AATACTTTCTGGCAAAATCG+TGG - chr1_3:826503-826522 Msa0095560:intron 35.0%
! ATACTTTCTGGCAAAATCGT+GGG - chr1_3:826504-826523 Msa0095560:intron 35.0%
! TCAAGTTTTCAGAAGATGAC+TGG - chr1_3:826573-826592 Msa0095560:intron 35.0%
ATATTGTGAATCCCAGATAG+TGG - chr1_3:826992-827011 Msa0095560:intron 35.0%
TAAATTGCTAATGATGTGGG+TGG - chr1_3:827336-827355 Msa0095560:intron 35.0%
TACAACAAACAGTGCTTATG+TGG + chr1_3:827478-827497 None:intergenic 35.0%
GATCTAAATATGGGGAAATC+AGG + chr1_3:827666-827685 None:intergenic 35.0%
!!! GATAAATGCTAGTTTTGGCT+GGG - chr1_3:827842-827861 Msa0095560:intron 35.0%
!! CAGATTTTAGTCGTGAAAAG+GGG - chr1_3:827980-827999 Msa0095560:intron 35.0%
!! AGATTTTAGTCGTGAAAAGG+GGG - chr1_3:827981-828000 Msa0095560:intron 35.0%
TATTAGTCCAGAACTGAAGA+AGG - chr1_3:828026-828045 Msa0095560:intron 35.0%
TAAGAGATGCTGTTGAAAAG+AGG - chr1_3:828129-828148 Msa0095560:CDS 35.0%
AAAGAATTCAGCAAGTCAGT+TGG - chr1_3:828209-828228 Msa0095560:intron 35.0%
AAGAATTCAGCAAGTCAGTT+GGG - chr1_3:828210-828229 Msa0095560:intron 35.0%
! GTATGAAGAAAATCGACTCA+AGG - chr1_3:828250-828269 Msa0095560:intron 35.0%
CTAATCATCTCTCCTGTTAT+TGG - chr1_3:828361-828380 Msa0095560:CDS 35.0%
TTGTGTTTGCAACCAATAAC+AGG + chr1_3:828376-828395 None:intergenic 35.0%
AAACCAACTAGTTCAGCATT+AGG - chr1_3:828449-828468 Msa0095560:intron 35.0%
GGATTATGCATAGAAGTCTA+CGG - chr1_3:828631-828650 Msa0095560:intron 35.0%
ATTTGTCCCATTTAAGTGGA+TGG - chr1_3:828667-828686 Msa0095560:intron 35.0%
TTTGTCCCATTTAAGTGGAT+GGG - chr1_3:828668-828687 Msa0095560:intron 35.0%
ATATATTTCACCTTAGAGGG+AGG - chr1_3:828732-828751 Msa0095560:intron 35.0%
TTACACAAAAGACTGTTTCC+AGG + chr1_3:828815-828834 None:intergenic 35.0%
AATAAAATAAAAGGGCAGCC+CGG + chr1_3:828904-828923 None:intergenic 35.0%
ATACAACAACACAAGCCTTA+TGG - chr1_3:828958-828977 Msa0095560:intron 35.0%
! TACAACAACACAAGCCTTAT+GGG - chr1_3:828959-828978 Msa0095560:intron 35.0%
TCACAACAAAACCATTTCAC+TGG + chr1_3:828990-829009 None:intergenic 35.0%
!! TTGCTGGTTCTCATCAAATT+CGG - chr1_3:829019-829038 Msa0095560:intron 35.0%
ATTCTTCCAGTATCTTCTCA+AGG + chr1_3:829167-829186 None:intergenic 35.0%
GACATGAGTAGGAAATGAAA+AGG + chr1_3:829298-829317 None:intergenic 35.0%
GGTTGGAGTATGAACAAAAT+CGG - chr1_3:829566-829585 Msa0095560:intron 35.0%
GTTGGAGTATGAACAAAATC+GGG - chr1_3:829567-829586 Msa0095560:intron 35.0%
GAGTTCACGAATTCAAGAAT+TGG - chr1_3:829594-829613 Msa0095560:intron 35.0%
! ATCAATCTCCAAAGCACTTA+GGG + chr1_3:829626-829645 None:intergenic 35.0%
! AATCAATCTCCAAAGCACTT+AGG + chr1_3:829627-829646 None:intergenic 35.0%
CAAAATACAATGATGAGGTG+TGG + chr1_3:829749-829768 None:intergenic 35.0%
TTTGTTGATCTTGACTGAAG+CGG - chr1_3:829896-829915 Msa0095560:intron 35.0%
CCAACGACAGAAACAATAAA+CGG + chr1_3:829943-829962 None:intergenic 35.0%
! TTTCTGTCGTTGGAGTTTTA+TGG - chr1_3:829950-829969 Msa0095560:intron 35.0%
! TGATTAGCTCAAAGGTTAGA+TGG - chr1_3:830094-830113 Msa0095560:intron 35.0%
! GATTAGCTCAAAGGTTAGAT+GGG - chr1_3:830095-830114 Msa0095560:intron 35.0%
! TTATGCATGAAAGTACACAC+GGG + chr1_3:830134-830153 None:intergenic 35.0%
TGTAACGACACTAAAGATGT+TGG + chr1_3:830168-830187 None:intergenic 35.0%
! AACATCTTTAGTGTCGTTAC+AGG - chr1_3:830167-830186 Msa0095560:intron 35.0%
TAGGATCTTGTATGATTGGA+AGG + chr1_3:830263-830282 None:intergenic 35.0%
TCCAATCATACAAGATCCTA+TGG - chr1_3:830263-830282 Msa0095560:intron 35.0%
TCCATAGGATCTTGTATGAT+TGG + chr1_3:830267-830286 None:intergenic 35.0%
! GTTGAAGTATCAGTATCCAT+AGG + chr1_3:830282-830301 None:intergenic 35.0%
AAGAACAGCACCAAATTTGA+AGG - chr1_3:830425-830444 Msa0095560:intron 35.0%
TTAGTACATAGCCGATAGTT+TGG - chr1_3:830618-830637 Msa0095560:five_prime_UTR 35.0%
TAGTACATAGCCGATAGTTT+GGG - chr1_3:830619-830638 Msa0095560:five_prime_UTR 35.0%
TATGTCGCATCACAATTTCA+TGG + chr1_3:830746-830765 None:intergenic 35.0%
CGATATGTGACAACATGTTT+CGG + chr1_3:830955-830974 None:intergenic 35.0%
CGAAACATGTTGTCACATAT+CGG - chr1_3:830953-830972 Msa0095560:intron 35.0%
!!! GGATTTTTTAACGATTGCCA+TGG - chr1_3:831007-831026 Msa0095560:intron 35.0%
CATTTATCAATGCCTTATGG+TGG + chr1_3:831110-831129 None:intergenic 35.0%
!!! AGGCCTTAGATTATTTTGAC+AGG + chr1_3:831209-831228 None:intergenic 35.0%
! TCAGTTTGTTCATTCTGAAC+GGG + chr1_3:831266-831285 None:intergenic 35.0%
! CTCAGTTTGTTCATTCTGAA+CGG + chr1_3:831267-831286 None:intergenic 35.0%
AAATGCATTTCAAGCGTAAC+AGG + chr1_3:831564-831583 None:intergenic 35.0%
!! CAGATATGATTTGTTCATGG+AGG - chr1_3:831626-831645 Msa0095560:intron 35.0%
TGGAACAGCATACCTAAATT+TGG - chr1_3:831722-831741 Msa0095560:intron 35.0%
TACTTCATGCCATGTAGAAA+TGG + chr1_3:831762-831781 None:intergenic 35.0%
AGTACAAATAACTCTACCTG+TGG + chr1_3:831878-831897 None:intergenic 35.0%
CTATAGCAGGTACGATATAA+TGG + chr1_3:832025-832044 None:intergenic 35.0%
! AAACCATGTTAATGGACATG+TGG + chr1_3:832412-832431 None:intergenic 35.0%
TCCAGTATGAAAAATGGTGA+AGG + chr1_3:832462-832481 None:intergenic 35.0%
! AATACTCTGAAAACCAGATC+CGG + chr1_3:832586-832605 None:intergenic 35.0%
!!! ATGTGCTACTTTTGTTCTGC+AGG - chr1_3:822044-822063 Msa0095560:intron 40.0%
! TACTTTTGTTCTGCAGGAGA+AGG - chr1_3:822050-822069 Msa0095560:intron 40.0%
TAAACTACGTGATCTGAAGG+CGG - chr1_3:822111-822130 Msa0095560:intron 40.0%
GAGAGATGCTAAATTGTCTC+AGG - chr1_3:822150-822169 Msa0095560:intron 40.0%
!! ACTCTGAAACGCTTGTTTCA+AGG - chr1_3:822181-822200 Msa0095560:intron 40.0%
ATGGCACAAACTAGGATATG+GGG + chr1_3:822353-822372 None:intergenic 40.0%
AAAAGCCATCAACAGCAAAC+AGG + chr1_3:822428-822447 None:intergenic 40.0%
AATTTAGTGGCCAGAACTAG+TGG + chr1_3:822599-822618 None:intergenic 40.0%
GCAAGACGAGAAGAATTTAG+TGG + chr1_3:822612-822631 None:intergenic 40.0%
!! TACAAGATGGATTGAGGAAG+GGG + chr1_3:822660-822679 None:intergenic 40.0%
!! CTACAAGATGGATTGAGGAA+GGG + chr1_3:822661-822680 None:intergenic 40.0%
!! ACTACAAGATGGATTGAGGA+AGG + chr1_3:822662-822681 None:intergenic 40.0%
TTCCTCAATCCATCTTGTAG+TGG - chr1_3:822661-822680 Msa0095560:CDS 40.0%
!!! AAGGGTTTTTTTGGAGGAGA+GGG + chr1_3:822743-822762 None:intergenic 40.0%
TTTGATTCCAAGGAAGGATG+TGG + chr1_3:822860-822879 None:intergenic 40.0%
!! ATTGCTGTGGAAGGGTATTA+AGG - chr1_3:823009-823028 Msa0095560:intron 40.0%
!! TGTGGAAGGGTATTAAGGTT+AGG - chr1_3:823014-823033 Msa0095560:intron 40.0%
GGTATTAAGGTTAGGAAGAG+AGG - chr1_3:823022-823041 Msa0095560:intron 40.0%
GTTAGGAAGAGAGGATAATC+CGG - chr1_3:823031-823050 Msa0095560:intron 40.0%
AGAGGATAATCCGGTATGTA+GGG - chr1_3:823040-823059 Msa0095560:intron 40.0%
AGTCATGTGAAGCATAAACC+TGG - chr1_3:823197-823216 Msa0095560:intron 40.0%
GAAAGCCCAAACATGAAACT+AGG - chr1_3:823226-823245 Msa0095560:intron 40.0%
GAAAGCCCTAGTTTCATGTT+TGG + chr1_3:823235-823254 None:intergenic 40.0%
TTCACCCGAATAGATTGTAG+AGG + chr1_3:823710-823729 None:intergenic 40.0%
GGAAAGATTACGCTCATTAG+GGG - chr1_3:823739-823758 Msa0095560:intron 40.0%
GAAAGATTACGCTCATTAGG+GGG - chr1_3:823740-823759 Msa0095560:intron 40.0%
ATGCAATGATGTGCATTTGG+CGG - chr1_3:823919-823938 Msa0095560:CDS 40.0%
GGGAAAATGGAGAGACAAAA+TGG - chr1_3:823995-824014 Msa0095560:CDS 40.0%
! GTAAATAGTGTACCGATGGA+TGG + chr1_3:824241-824260 None:intergenic 40.0%
TACTGCAATTGTTTGTCCAG+TGG - chr1_3:824270-824289 Msa0095560:CDS 40.0%
ATTTGTAGGGAGAAAACCAC+TGG + chr1_3:824289-824308 None:intergenic 40.0%
AGGGGAAAGAATACAAGAAC+AGG + chr1_3:824780-824799 None:intergenic 40.0%
! GAAGGCAATTCTATTTGCTG+TGG - chr1_3:824936-824955 Msa0095560:intron 40.0%
! GCCAAAATTTTAAGCTGGAG+TGG - chr1_3:824990-825009 Msa0095560:intron 40.0%
! CCCACTCCAGCTTAAAATTT+TGG + chr1_3:824994-825013 None:intergenic 40.0%
GCTCTTCACACATTCATCAA+TGG - chr1_3:825266-825285 Msa0095560:intron 40.0%
AAGAAGCCAGAGAGAAAAAC+AGG + chr1_3:825350-825369 None:intergenic 40.0%
AACCTATGATGCATAGGTAC+GGG - chr1_3:825471-825490 Msa0095560:intron 40.0%
ACTCTCAAGCAACATGATGA+TGG + chr1_3:825537-825556 None:intergenic 40.0%
TTGGTGCAGCAAAAATGTAC+GGG + chr1_3:825632-825651 None:intergenic 40.0%
GTTGGTGCAGCAAAAATGTA+CGG + chr1_3:825633-825652 None:intergenic 40.0%
GAATGCAACACATACATGGT+AGG + chr1_3:825814-825833 None:intergenic 40.0%
TGTCAGCAAAATTCCATCCA+CGG + chr1_3:825905-825924 None:intergenic 40.0%
TGGGATGACAAGATACTTGA+AGG - chr1_3:825982-826001 Msa0095560:intron 40.0%
! CGTTAAAGAGTCTGAAACAG+AGG - chr1_3:826219-826238 Msa0095560:intron 40.0%
GAAACAGAGGGGAAAAAAAG+TGG - chr1_3:826232-826251 Msa0095560:intron 40.0%
CACAAAAAACCTTCAAAGGC+TGG + chr1_3:826360-826379 None:intergenic 40.0%
TGTGTTTCACAATCAGATGG+GGG - chr1_3:826457-826476 Msa0095560:intron 40.0%
!!! AGTGAACCTGTTTTGAGATC+TGG - chr1_3:826549-826568 Msa0095560:intron 40.0%
!!! GTGAACCTGTTTTGAGATCT+GGG - chr1_3:826550-826569 Msa0095560:intron 40.0%
TGCATAAGAGAGGATACAGA+GGG + chr1_3:826777-826796 None:intergenic 40.0%
AAAATCTTTCCTTCGGGCTT+CGG + chr1_3:826828-826847 None:intergenic 40.0%
! AAGCCCGAAGGAAAGATTTT+AGG - chr1_3:826828-826847 Msa0095560:intron 40.0%
! AAACTGCTAAAGCGTTTAGC+AGG - chr1_3:827030-827049 Msa0095560:intron 40.0%
! AACTGCTAAAGCGTTTAGCA+GGG - chr1_3:827031-827050 Msa0095560:intron 40.0%
AAAACACACCCGAATAGCAT+TGG + chr1_3:827184-827203 None:intergenic 40.0%
! AATGCTATTCGGGTGTGTTT+TGG - chr1_3:827183-827202 Msa0095560:intron 40.0%
GAGTCTGTTACAGAGTATGT+AGG - chr1_3:827508-827527 Msa0095560:intron 40.0%
TAGAACGAAAACTCGGAGAA+GGG + chr1_3:827601-827620 None:intergenic 40.0%
ATAGAACGAAAACTCGGAGA+AGG + chr1_3:827602-827621 None:intergenic 40.0%
CTGGGAAGATTTCTAAATGG+TGG + chr1_3:827638-827657 None:intergenic 40.0%
!!! TTTGTTTTTGCATCTGTGGC+TGG - chr1_3:827820-827839 Msa0095560:intron 40.0%
!! GGCTGGATAAATGCTAGTTT+TGG - chr1_3:827837-827856 Msa0095560:intron 40.0%
!!! GGATAAATGCTAGTTTTGGC+TGG - chr1_3:827841-827860 Msa0095560:intron 40.0%
AATGTCACCTTCTTCAGTTC+TGG + chr1_3:828036-828055 None:intergenic 40.0%
AGAACTGAAGAAGGTGACAT+TGG - chr1_3:828035-828054 Msa0095560:intron 40.0%
AGAATTCAGCAAGTCAGTTG+GGG - chr1_3:828211-828230 Msa0095560:intron 40.0%
AGCATTAGGCTCTGTCAAAT+CGG - chr1_3:828463-828482 Msa0095560:intron 40.0%
! GGGGACAGAACACTAATTTT+TGG - chr1_3:828610-828629 Msa0095560:intron 40.0%
GACAACCCATCCACTTAAAT+GGG + chr1_3:828676-828695 None:intergenic 40.0%
AGACAACCCATCCACTTAAA+TGG + chr1_3:828677-828696 None:intergenic 40.0%
ACAACTTTACTGTTGCGCAA+AGG + chr1_3:828760-828779 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr1_3:828775-828794 Msa0095560:intron 40.0%
TTTCACTGGACTAACCCATA+AGG + chr1_3:828976-828995 None:intergenic 40.0%
!! TATGGGTTAGTCCAGTGAAA+TGG - chr1_3:828976-828995 Msa0095560:intron 40.0%
!!! GTTGTGATTTTGGTTCTTGC+TGG - chr1_3:829003-829022 Msa0095560:intron 40.0%
!!! CTTTTTTTCTCTCTCCCACT+TGG + chr1_3:829113-829132 None:intergenic 40.0%
GTGAAACCTTGAGAAGATAC+TGG - chr1_3:829158-829177 Msa0095560:intron 40.0%
GGCTTAGAGAAAGTGACTAA+TGG - chr1_3:829223-829242 Msa0095560:intron 40.0%
TAACTTTGCTTCAGCCTCTT+TGG + chr1_3:829665-829684 None:intergenic 40.0%
ATGCTATTGTTGCGGTAGAT+TGG - chr1_3:829822-829841 Msa0095560:intron 40.0%
!! CCGTTTATTGTTTCTGTCGT+TGG - chr1_3:829940-829959 Msa0095560:intron 40.0%
CTCTGATTTCCACTCTACAA+GGG + chr1_3:829992-830011 None:intergenic 40.0%
ACTCTGATTTCCACTCTACA+AGG + chr1_3:829993-830012 None:intergenic 40.0%
GTGAAAAGGAAATCCAGGAA+TGG - chr1_3:830022-830041 Msa0095560:intron 40.0%
AATCCAGGAATGGAAGAAGA+AGG - chr1_3:830032-830051 Msa0095560:intron 40.0%
!! AAGTTTGGCTAAGCTTGTTG+TGG + chr1_3:830067-830086 None:intergenic 40.0%
! ATCTTTAGTGTCGTTACAGG+AGG - chr1_3:830170-830189 Msa0095560:intron 40.0%
CACAGATTGAGCAGTTGATT+GGG - chr1_3:830193-830212 Msa0095560:intron 40.0%
GGATACTGATACTTCAACAC+CGG - chr1_3:830284-830303 Msa0095560:intron 40.0%
GATACTGATACTTCAACACC+GGG - chr1_3:830285-830304 Msa0095560:intron 40.0%
TCAAAGTCAAATACTGGACC+CGG + chr1_3:830306-830325 None:intergenic 40.0%
AAGATAGGAGACAATCTGAC+AGG - chr1_3:830346-830365 Msa0095560:intron 40.0%
AGATAGGAGACAATCTGACA+GGG - chr1_3:830347-830366 Msa0095560:intron 40.0%
ATCTGACAGGGGTAAAATAG+AGG - chr1_3:830359-830378 Msa0095560:intron 40.0%
! AGCACCAAATTTGAAGGCAT+TGG - chr1_3:830431-830450 Msa0095560:intron 40.0%
TGGTCCAATGCCTTCAAATT+TGG + chr1_3:830438-830457 None:intergenic 40.0%
ACCATACATGCCCAAACTAT+CGG + chr1_3:830632-830651 None:intergenic 40.0%
! AGTTTGGGCATGTATGGTTT+TGG - chr1_3:830634-830653 Msa0095560:five_prime_UTR 40.0%
! GTTTGGGCATGTATGGTTTT+GGG - chr1_3:830635-830654 Msa0095560:five_prime_UTR 40.0%
TGCCAAGGTAGAGATTATAG+CGG + chr1_3:830715-830734 None:intergenic 40.0%
GCATCACAATTTCATGGTGT+GGG + chr1_3:830740-830759 None:intergenic 40.0%
TGATACCCTAGTTGGCAATA+GGG + chr1_3:830820-830839 None:intergenic 40.0%
ATGATACCCTAGTTGGCAAT+AGG + chr1_3:830821-830840 None:intergenic 40.0%
ATGTTGTCACATATCGGTCA+TGG - chr1_3:830959-830978 Msa0095560:intron 40.0%
!!! AGACTTTTAGCTTCCCATCA+CGG - chr1_3:831083-831102 Msa0095560:intron 40.0%
TTTCTGCGTTCATTTCCTCT+AGG - chr1_3:831136-831155 Msa0095560:intron 40.0%
TTCTGCGTTCATTTCCTCTA+GGG - chr1_3:831137-831156 Msa0095560:intron 40.0%
GAAGACGATCCATTTCTACA+TGG - chr1_3:831750-831769 Msa0095560:intron 40.0%
CAAATAACTCTACCTGTGGA+TGG + chr1_3:831874-831893 None:intergenic 40.0%
TCCCATTTAAAAAGGTCCAC+CGG - chr1_3:831994-832013 Msa0095560:intron 40.0%
! ACCGGTGGACCTTTTTAAAT+GGG + chr1_3:831998-832017 None:intergenic 40.0%
!! GTACGATATAATGGGTTCAC+CGG + chr1_3:832016-832035 None:intergenic 40.0%
TATATCGTACCTGCTATAGC+CGG - chr1_3:832026-832045 Msa0095560:five_prime_UTR 40.0%
AAGTTATAACCGGCTATAGC+AGG + chr1_3:832038-832057 None:intergenic 40.0%
GGAATTGAAGAGGAAGAAGA+GGG - chr1_3:832099-832118 Msa0095560:five_prime_UTR 40.0%
GAATTGAAGAGGAAGAAGAG+GGG - chr1_3:832100-832119 Msa0095560:five_prime_UTR 40.0%
! CTTTTCCTTAATGTGCCAAC+TGG - chr1_3:832148-832167 Msa0095560:five_prime_UTR 40.0%
GAAAACCAGTTGGCACATTA+AGG + chr1_3:832156-832175 None:intergenic 40.0%
!!! ATGTGCCAACTGGTTTTCAA+TGG - chr1_3:832158-832177 Msa0095560:five_prime_UTR 40.0%
ACCCATGAACCTTACTCTAA+CGG - chr1_3:832184-832203 Msa0095560:five_prime_UTR 40.0%
AATATGCACCCGTTAGAGTA+AGG + chr1_3:832196-832215 None:intergenic 40.0%
! TACTCTAACGGGTGCATATT+AGG - chr1_3:832196-832215 Msa0095560:five_prime_UTR 40.0%
! ACTCTAACGGGTGCATATTA+GGG - chr1_3:832197-832216 Msa0095560:five_prime_UTR 40.0%
GCAAGTGGAAACCATGTTAA+TGG + chr1_3:832420-832439 None:intergenic 40.0%
!! GCCTTCACCATTTTTCATAC+TGG - chr1_3:832458-832477 Msa0095560:five_prime_UTR 40.0%
GGACAACTTGAATGTTGCAA+AGG - chr1_3:832500-832519 Msa0095560:five_prime_UTR 40.0%
TTGAATGTTGCAAAGGTTGC+TGG - chr1_3:832507-832526 Msa0095560:five_prime_UTR 40.0%
CAAAATCTTGTGAAGGAGCA+AGG - chr1_3:832541-832560 Msa0095560:five_prime_UTR 40.0%
! ACAAAGCTGAAGCGTTAGTT+GGG - chr1_3:832634-832653 Msa0095560:five_prime_UTR 40.0%
! TTTACAGGGACTCTGAAAGA+GGG - chr1_3:832658-832677 Msa0095560:five_prime_UTR 40.0%
GAAAACCGCAAAGCTTAGAG+AGG - chr1_3:821697-821716 Msa0095560:CDS 45.0%
AGGAAAAGCAGATGCGAGAA+AGG - chr1_3:821825-821844 Msa0095560:CDS 45.0%
TGCTAAATTGTCTCAGGCTG+TGG - chr1_3:822156-822175 Msa0095560:intron 45.0%
AAAGATCAGTCATGCGACCA+TGG + chr1_3:822210-822229 None:intergenic 45.0%
GTCGCATGACTGATCTTTGT+AGG - chr1_3:822212-822231 Msa0095560:intron 45.0%
CTAGCCGTTACTGTTGCTAT+GGG - chr1_3:822256-822275 Msa0095560:intron 45.0%
AATGGATGCAGTTGTTGTGG+AGG - chr1_3:822285-822304 Msa0095560:intron 45.0%
GTTGTGGAGGATGAAAAGAC+CGG - chr1_3:822298-822317 Msa0095560:intron 45.0%
TTGTGGAGGATGAAAAGACC+GGG - chr1_3:822299-822318 Msa0095560:intron 45.0%
AACCTTGATGCATTCCTTCC+CGG + chr1_3:822320-822339 None:intergenic 45.0%
!! CTGTTCCTGTTTGCTGTTGA+TGG - chr1_3:822420-822439 Msa0095560:intron 45.0%
GGCATCAGCGTATTCTAACA+TGG - chr1_3:822546-822565 Msa0095560:CDS 45.0%
TCTAACATGGACCACCTAGA+TGG - chr1_3:822559-822578 Msa0095560:CDS 45.0%
ATCAAGAACCACCATCTAGG+TGG + chr1_3:822573-822592 None:intergenic 45.0%
CACATCAAGAACCACCATCT+AGG + chr1_3:822576-822595 None:intergenic 45.0%
! TCTTGATGTGCCACTAGTTC+TGG - chr1_3:822586-822605 Msa0095560:CDS 45.0%
!! TAATTTGGTGTGGAGGGTGT+GGG + chr1_3:822637-822656 None:intergenic 45.0%
!! AAGGGGTAATTTGGTGTGGA+GGG + chr1_3:822643-822662 None:intergenic 45.0%
GGATTGAGGAAGGGGTAATT+TGG + chr1_3:822652-822671 None:intergenic 45.0%
! GAATGGGCTTCGACGATTTA+GGG + chr1_3:822692-822711 None:intergenic 45.0%
!!! AGGGTTTTTTTGGAGGAGAG+GGG + chr1_3:822742-822761 None:intergenic 45.0%
!!! CAAGGGTTTTTTTGGAGGAG+AGG + chr1_3:822744-822763 None:intergenic 45.0%
!!! CTTGGAGGCAAGGGTTTTTT+TGG + chr1_3:822752-822771 None:intergenic 45.0%
TCCAAGAGTAATACCCAGCT+GGG + chr1_3:822883-822902 None:intergenic 45.0%
TACTCTTGGAGGAAGTGAGA+TGG - chr1_3:822893-822912 Msa0095560:intron 45.0%
ACTCTTGGAGGAAGTGAGAT+GGG - chr1_3:822894-822913 Msa0095560:intron 45.0%
! TTCTGTTTGAGGTTGCATGG+TGG - chr1_3:822953-822972 Msa0095560:intron 45.0%
! TCTGTTTGAGGTTGCATGGT+GGG - chr1_3:822954-822973 Msa0095560:intron 45.0%
!! TGGTGAAGCTTCTGGTTTCA+GGG - chr1_3:822977-822996 Msa0095560:intron 45.0%
GAGAGGATAATCCGGTATGT+AGG - chr1_3:823039-823058 Msa0095560:intron 45.0%
ATAGGGTAGACCCTACATAC+CGG + chr1_3:823053-823072 None:intergenic 45.0%
TGCTTAATGATGGTCCACTG+TGG - chr1_3:823100-823119 Msa0095560:intron 45.0%
TGAAACTAGGGCTTTCAAGC+TGG - chr1_3:823239-823258 Msa0095560:intron 45.0%
! TTGTTGCCTTTTCGTCTCTG+AGG - chr1_3:823274-823293 Msa0095560:intron 45.0%
TTAGGTCCTCAGAGACGAAA+AGG + chr1_3:823283-823302 None:intergenic 45.0%
TCAAACAAAACCCGCTGGAA+TGG + chr1_3:823327-823346 None:intergenic 45.0%
AGAGGAATAAAAGTCTGGGG+AGG + chr1_3:823692-823711 None:intergenic 45.0%
! ATTAGGGGGTACAGCAAAAC+TGG - chr1_3:823754-823773 Msa0095560:intron 45.0%
! AGTGGTTACTTTGAGGGAAC+TGG - chr1_3:823809-823828 Msa0095560:CDS 45.0%
TTTGAGGGAACTGGTTGTGA+GGG - chr1_3:823818-823837 Msa0095560:CDS 45.0%
!! GTTGTGAGGGTGTCTACAAA+GGG - chr1_3:823831-823850 Msa0095560:CDS 45.0%
TGCAATGATGTGCATTTGGC+GGG - chr1_3:823920-823939 Msa0095560:CDS 45.0%
!! GAAGCTTTTGTAGACGGGTT+AGG + chr1_3:824028-824047 None:intergenic 45.0%
! GAAGGGCAAGCTAGCTTAAA+AGG + chr1_3:824109-824128 None:intergenic 45.0%
!! TGGTGTTACCTTGTCAGTCA+CGG - chr1_3:824418-824437 Msa0095560:intron 45.0%
ACATATCACCGTGACTGACA+AGG + chr1_3:824429-824448 None:intergenic 45.0%
GTGATATGTAGAGCTGCAGT+TGG - chr1_3:824440-824459 Msa0095560:intron 45.0%
AGAATTGCCTTCTCCAAGGA+GGG + chr1_3:824928-824947 None:intergenic 45.0%
TAGAATTGCCTTCTCCAAGG+AGG + chr1_3:824929-824948 None:intergenic 45.0%
! TCTTGTTTGTGAAGACCTCG+AGG - chr1_3:824965-824984 Msa0095560:intron 45.0%
!! CTCCTTCCTGTTTTTCTCTC+TGG - chr1_3:825341-825360 Msa0095560:intron 45.0%
AGCCAGAGAGAAAAACAGGA+AGG + chr1_3:825346-825365 None:intergenic 45.0%
TACCCGTACCTATGCATCAT+AGG + chr1_3:825476-825495 None:intergenic 45.0%
TACCGGTACTTCTCCATGTT+TGG - chr1_3:825740-825759 Msa0095560:intron 45.0%
! CTCCAAACATGGAGAAGTAC+CGG + chr1_3:825745-825764 None:intergenic 45.0%
AAGCATGGGTACTCCAAACA+TGG + chr1_3:825756-825775 None:intergenic 45.0%
!! GGTTAGAACCTCTGAAGCAT+GGG + chr1_3:825770-825789 None:intergenic 45.0%
!! TGGTTAGAACCTCTGAAGCA+TGG + chr1_3:825771-825790 None:intergenic 45.0%
CCAGGAATGCAACACATACA+TGG + chr1_3:825818-825837 None:intergenic 45.0%
CCATGTATGTGTTGCATTCC+TGG - chr1_3:825815-825834 Msa0095560:intron 45.0%
TGATCAGTTGTAACCGTGGA+TGG - chr1_3:825889-825908 Msa0095560:intron 45.0%
ACAAAATCCGGCACAATGAC+TGG - chr1_3:825922-825941 Msa0095560:intron 45.0%
TGGAAGCAAGGTCAAAACAG+TGG - chr1_3:825962-825981 Msa0095560:intron 45.0%
GGAAGCAAGGTCAAAACAGT+GGG - chr1_3:825963-825982 Msa0095560:intron 45.0%
AGTATGAGTCGGAGTTGGAA+GGG - chr1_3:826173-826192 Msa0095560:CDS 45.0%
CAAAATCGTGGGATCGAAGA+TGG - chr1_3:826515-826534 Msa0095560:intron 45.0%
CTTGACCCAGATCTCAAAAC+AGG + chr1_3:826558-826577 None:intergenic 45.0%
!! CAGACAGCGAAATGGACTAA+TGG + chr1_3:826660-826679 None:intergenic 45.0%
GAGAGATTCAGACAGCGAAA+TGG + chr1_3:826668-826687 None:intergenic 45.0%
CTGCATAAGAGAGGATACAG+AGG + chr1_3:826778-826797 None:intergenic 45.0%
TATAATCATCCGAAGCCCGA+AGG - chr1_3:826816-826835 Msa0095560:intron 45.0%
AAAGCGAGAATTGGGCCATA+TGG - chr1_3:826854-826873 Msa0095560:intron 45.0%
AAGCGAGAATTGGGCCATAT+GGG - chr1_3:826855-826874 Msa0095560:intron 45.0%
GATTTGCCGGAGTCTCAATT+AGG - chr1_3:826902-826921 Msa0095560:intron 45.0%
TCAAACAATCGGTCCAGTTG+CGG - chr1_3:827154-827173 Msa0095560:intron 45.0%
!!! ATTCGGGTGTGTTTTGGTTG+TGG - chr1_3:827189-827208 Msa0095560:intron 45.0%
TCCACTGCAACATGTTCTAC+AGG + chr1_3:827254-827273 None:intergenic 45.0%
CAGTTCTCTGTAGTCCATCA+CGG + chr1_3:827290-827309 None:intergenic 45.0%
CATAGGAGAGCTTGCACTAT+TGG - chr1_3:827739-827758 Msa0095560:intron 45.0%
!!! ATGCTAGTTTTGGCTGGGTA+TGG - chr1_3:827847-827866 Msa0095560:intron 45.0%
!!! AGTTTTGGCTGGGTATGGAT+AGG - chr1_3:827852-827871 Msa0095560:intron 45.0%
TCTCTGTCTTCTGTTCCTCT+TGG - chr1_3:827898-827917 Msa0095560:intron 45.0%
GAGCCTAATGCTGAACTAGT+TGG + chr1_3:828455-828474 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr1_3:828781-828800 Msa0095560:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr1_3:828782-828801 Msa0095560:intron 45.0%
GGTAAGCCTGTGTACCAAAA+TGG - chr1_3:828841-828860 Msa0095560:intron 45.0%
AAGCCTGTGTACCAAAATGG+TGG - chr1_3:828844-828863 Msa0095560:intron 45.0%
AGCCTGTGTACCAAAATGGT+GGG - chr1_3:828845-828864 Msa0095560:intron 45.0%
GGAATCTTCCCTAAGTGCTT+TGG - chr1_3:829615-829634 Msa0095560:intron 45.0%
! AAAAGGGGTACAGACCAAAG+AGG - chr1_3:829648-829667 Msa0095560:intron 45.0%
! TCTCTCTCTCCCTTTTTCTG+AGG - chr1_3:829793-829812 Msa0095560:intron 45.0%
!!! TCTCTCCCTTTTTCTGAGGT+TGG - chr1_3:829797-829816 Msa0095560:intron 45.0%
!!! CTCTCCCTTTTTCTGAGGTT+GGG - chr1_3:829798-829817 Msa0095560:intron 45.0%
!!! TCTCCCTTTTTCTGAGGTTG+GGG - chr1_3:829799-829818 Msa0095560:intron 45.0%
CATCCCCAACCTCAGAAAAA+GGG + chr1_3:829805-829824 None:intergenic 45.0%
! GTTTTTCTGCCCTTGTAGAG+TGG - chr1_3:829980-829999 Msa0095560:intron 45.0%
AGAGTGGAAATCAGAGTCAG+AGG - chr1_3:829996-830015 Msa0095560:intron 45.0%
AGAGTCAGAGGATCGTGAAA+AGG - chr1_3:830008-830027 Msa0095560:intron 45.0%
GGATCGTGAAAAGGAAATCC+AGG - chr1_3:830017-830036 Msa0095560:intron 45.0%
AAGCCTTCTTCTTCCATTCC+TGG + chr1_3:830038-830057 None:intergenic 45.0%
GGAATGGAAGAAGAAGGCTT+CGG - chr1_3:830038-830057 Msa0095560:intron 45.0%
GCACAGATTGAGCAGTTGAT+TGG - chr1_3:830192-830211 Msa0095560:intron 45.0%
GATAGGAGACAATCTGACAG+GGG - chr1_3:830348-830367 Msa0095560:intron 45.0%
TTTCAAGCAGAGCCTCATAC+TGG + chr1_3:830458-830477 None:intergenic 45.0%
! CTGAAGAGTTTGAAGCTGTC+AGG - chr1_3:830493-830512 Msa0095560:intron 45.0%
AGCTGTCAGGAAAGAAGAGA+AGG - chr1_3:830506-830525 Msa0095560:intron 45.0%
GCACAAAGAAGCTATGGAGT+TGG + chr1_3:830664-830683 None:intergenic 45.0%
CATAGCTTCTTTGTGCACTC+CGG - chr1_3:830668-830687 Msa0095560:intron 45.0%
! ATTTTCACCACAATAGCGGC+CGG + chr1_3:830690-830709 None:intergenic 45.0%
! GGCGATTTTCACCACAATAG+CGG + chr1_3:830694-830713 None:intergenic 45.0%
CGCATCACAATTTCATGGTG+TGG + chr1_3:830741-830760 None:intergenic 45.0%
TGGCACAATAGTGCGACTAT+TGG - chr1_3:830793-830812 Msa0095560:intron 45.0%
GGCACAATAGTGCGACTATT+GGG - chr1_3:830794-830813 Msa0095560:intron 45.0%
GACAACATGTTTCGGAGCTA+GGG + chr1_3:830947-830966 None:intergenic 45.0%
TGACAACATGTTTCGGAGCT+AGG + chr1_3:830948-830967 None:intergenic 45.0%
AACGATTGCCATGGCCAATT+CGG - chr1_3:831016-831035 Msa0095560:intron 45.0%
AAAAGTCTGCCATGGAAAGC+TGG + chr1_3:831071-831090 None:intergenic 45.0%
TCTGCGTTCATTTCCTCTAG+GGG - chr1_3:831138-831157 Msa0095560:intron 45.0%
! TTTCCTCTAGGGGTGAGAAT+TGG - chr1_3:831148-831167 Msa0095560:intron 45.0%
TCTAGGGGTGAGAATTGGTT+GGG - chr1_3:831153-831172 Msa0095560:intron 45.0%
! ATCTAAGGCCTAACCGTCAT+AGG - chr1_3:831218-831237 Msa0095560:intron 45.0%
AAAGAGCAACACACATCCTC+TGG - chr1_3:831698-831717 Msa0095560:intron 45.0%
AAGAGCAACACACATCCTCT+GGG - chr1_3:831699-831718 Msa0095560:intron 45.0%
CAGATAGTTGTTCCATGTCG+CGG + chr1_3:831812-831831 None:intergenic 45.0%
GACATGGAACAACTATCTGG+CGG - chr1_3:831813-831832 Msa0095560:intron 45.0%
! GGGGCACCCTTTATGAATAA+AGG + chr1_3:831966-831985 None:intergenic 45.0%
!! CATAAAGGGTGCCCCTAATA+TGG - chr1_3:831971-831990 Msa0095560:intron 45.0%
! CACCGGTGGACCTTTTTAAA+TGG + chr1_3:831999-832018 None:intergenic 45.0%
TATCTTTGTGCAACTGGGTG+TGG - chr1_3:832071-832090 Msa0095560:five_prime_UTR 45.0%
!! TGTGGTGATGGGAATTGAAG+AGG - chr1_3:832089-832108 Msa0095560:five_prime_UTR 45.0%
GGGAATTGAAGAGGAAGAAG+AGG - chr1_3:832098-832117 Msa0095560:five_prime_UTR 45.0%
GTGGACCATTGAAAACCAGT+TGG + chr1_3:832166-832185 None:intergenic 45.0%
GTTAGAGTAAGGTTCATGGG+TGG + chr1_3:832185-832204 None:intergenic 45.0%
CCCGTTAGAGTAAGGTTCAT+GGG + chr1_3:832188-832207 None:intergenic 45.0%
CCCATGAACCTTACTCTAAC+GGG - chr1_3:832185-832204 Msa0095560:five_prime_UTR 45.0%
ACCCGTTAGAGTAAGGTTCA+TGG + chr1_3:832189-832208 None:intergenic 45.0%
! CTCTAACGGGTGCATATTAG+GGG - chr1_3:832198-832217 Msa0095560:five_prime_UTR 45.0%
GGTCCACATGTCCATTAACA+TGG - chr1_3:832406-832425 Msa0095560:five_prime_UTR 45.0%
!! GGATGAAGTTGATGCTGCAT+TGG - chr1_3:832479-832498 Msa0095560:five_prime_UTR 45.0%
TGAAGGAGCAAGGACTAATC+AGG - chr1_3:832551-832570 Msa0095560:five_prime_UTR 45.0%
ACTAATCAGGATGCTGATGC+CGG - chr1_3:832564-832583 Msa0095560:five_prime_UTR 45.0%
! GACAAAGCTGAAGCGTTAGT+TGG - chr1_3:832633-832652 Msa0095560:five_prime_UTR 45.0%
! CAAAGCTGAAGCGTTAGTTG+GGG - chr1_3:832635-832654 Msa0095560:five_prime_UTR 45.0%
AAGCGTTAGTTGGGGTTTAC+AGG - chr1_3:832643-832662 Msa0095560:five_prime_UTR 45.0%
AGCGTTAGTTGGGGTTTACA+GGG - chr1_3:832644-832663 Msa0095560:five_prime_UTR 45.0%
! GTTTACAGGGACTCTGAAAG+AGG - chr1_3:832657-832676 Msa0095560:five_prime_UTR 45.0%
!!! TTTTTTTTCATTTTAATTTA+AGG - chr1_3:821975-821994 Msa0095560:intron 5.0%
!! ATTATATTATTATGAAAAAA+TGG + chr1_3:826313-826332 None:intergenic 5.0%
!! ATATATACTAATAATAAAAT+AGG + chr1_3:828718-828737 None:intergenic 5.0%
!! ATAAAAATAAAAAATTAACT+TGG + chr1_3:831299-831318 None:intergenic 5.0%
CGCTTGTTTCAAGGAGTCCA+TGG - chr1_3:822190-822209 Msa0095560:intron 50.0%
CCATAGCAACAGTAACGGCT+AGG + chr1_3:822258-822277 None:intergenic 50.0%
CCTAGCCGTTACTGTTGCTA+TGG - chr1_3:822255-822274 Msa0095560:intron 50.0%
AACATGGACCACCTAGATGG+TGG - chr1_3:822562-822581 Msa0095560:CDS 50.0%
!! GTAATTTGGTGTGGAGGGTG+TGG + chr1_3:822638-822657 None:intergenic 50.0%
!! GAAGGGGTAATTTGGTGTGG+AGG + chr1_3:822644-822663 None:intergenic 50.0%
! GAGGAAGGGGTAATTTGGTG+TGG + chr1_3:822647-822666 None:intergenic 50.0%
!! GGCCACTACAAGATGGATTG+AGG + chr1_3:822666-822685 None:intergenic 50.0%
! GGAATGGGCTTCGACGATTT+AGG + chr1_3:822693-822712 None:intergenic 50.0%
!!! GGAGGCAAGGGTTTTTTTGG+AGG + chr1_3:822749-822768 None:intergenic 50.0%
TGTCGTAGACTTGGAGGCAA+GGG + chr1_3:822761-822780 None:intergenic 50.0%
TCGTACTGTCGTAGACTTGG+AGG + chr1_3:822767-822786 None:intergenic 50.0%
TGCTCGTACTGTCGTAGACT+TGG + chr1_3:822770-822789 None:intergenic 50.0%
GCAACTTCCACATCCTTCCT+TGG - chr1_3:822850-822869 Msa0095560:intron 50.0%
GCTGGGTTTGATTCCAAGGA+AGG + chr1_3:822866-822885 None:intergenic 50.0%
TCCTTGGAATCAAACCCAGC+TGG - chr1_3:822866-822885 Msa0095560:intron 50.0%
CCTTGGAATCAAACCCAGCT+GGG - chr1_3:822867-822886 Msa0095560:intron 50.0%
ACCCAGCTGGGTATTACTCT+TGG - chr1_3:822879-822898 Msa0095560:intron 50.0%
CTCCAAGAGTAATACCCAGC+TGG + chr1_3:822884-822903 None:intergenic 50.0%
CAGCTGGGTATTACTCTTGG+AGG - chr1_3:822882-822901 Msa0095560:intron 50.0%
! CGCTTCTGTTTGAGGTTGCA+TGG - chr1_3:822950-822969 Msa0095560:intron 50.0%
!! GTGGTGAAGCTTCTGGTTTC+AGG - chr1_3:822976-822995 Msa0095560:intron 50.0%
!! TGAAGCTTCTGGTTTCAGGG+AGG - chr1_3:822980-822999 Msa0095560:intron 50.0%
GTTTGGGCTTTCAGTTCACC+AGG + chr1_3:823218-823237 None:intergenic 50.0%
AACTAGGGCTTTCAAGCTGG+TGG - chr1_3:823242-823261 Msa0095560:intron 50.0%
! TTAGCCTTCTGCCATTCCAG+CGG - chr1_3:823313-823332 Msa0095560:intron 50.0%
ATGGGTCAAACAAAACCCGC+TGG + chr1_3:823332-823351 None:intergenic 50.0%
! CTTTGAGGGAACTGGTTGTG+AGG - chr1_3:823817-823836 Msa0095560:CDS 50.0%
!! GGTTGTGAGGGTGTCTACAA+AGG - chr1_3:823830-823849 Msa0095560:CDS 50.0%
GGTGATAGGTGACCATCCAT+CGG - chr1_3:824226-824245 Msa0095560:intron 50.0%
GTGCAAGTTTGATCCCTCCT+TGG - chr1_3:824912-824931 Msa0095560:intron 50.0%
GTTTGATCCCTCCTTGGAGA+AGG - chr1_3:824918-824937 Msa0095560:intron 50.0%
! TTTTAAGCTGGAGTGGGGAG+AGG - chr1_3:824997-825016 Msa0095560:intron 50.0%
TGGAGTGGGGAGAGGTTTAA+AGG - chr1_3:825005-825024 Msa0095560:intron 50.0%
AACAGCTGTCTCACAAGCCT+AGG - chr1_3:825141-825160 Msa0095560:intron 50.0%
ACAGCTGTCTCACAAGCCTA+GGG - chr1_3:825142-825161 Msa0095560:intron 50.0%
ATGCATAGGTACGGGTACGT+TGG - chr1_3:825479-825498 Msa0095560:intron 50.0%
!! CATGGAGAAGTACCGGTACA+GGG + chr1_3:825738-825757 None:intergenic 50.0%
!! ACATGGAGAAGTACCGGTAC+AGG + chr1_3:825739-825758 None:intergenic 50.0%
! TTGGAGTACCCATGCTTCAG+AGG - chr1_3:825759-825778 Msa0095560:intron 50.0%
AAATCCGGCACAATGACTGG+TGG - chr1_3:825925-825944 Msa0095560:intron 50.0%
ACAATGACTGGTGGCACTAG+TGG - chr1_3:825934-825953 Msa0095560:intron 50.0%
! CTAGTGGTGGAATGGAAGCA+AGG - chr1_3:825950-825969 Msa0095560:intron 50.0%
! AGAGGAGTATGAGTCGGAGT+TGG - chr1_3:826168-826187 Msa0095560:CDS 50.0%
GAGTATGAGTCGGAGTTGGA+AGG - chr1_3:826172-826191 Msa0095560:CDS 50.0%
TTCACAATCAGATGGGGGTG+TGG - chr1_3:826462-826481 Msa0095560:intron 50.0%
TCGTGGGATCGAAGATGGAA+AGG - chr1_3:826520-826539 Msa0095560:intron 50.0%
GAACGAAGACAGCGTGATCA+GGG + chr1_3:826614-826633 None:intergenic 50.0%
AGAACGAAGACAGCGTGATC+AGG + chr1_3:826615-826634 None:intergenic 50.0%
TCTGAATCTCTCCCTTGCTC+TGG - chr1_3:826676-826695 Msa0095560:intron 50.0%
CTGAATCTCTCCCTTGCTCT+GGG - chr1_3:826677-826696 Msa0095560:intron 50.0%
AGGAACAGAGCAGAGAAGGA+GGG + chr1_3:826748-826767 None:intergenic 50.0%
AGTCAGGAACAGAGCAGAGA+AGG + chr1_3:826752-826771 None:intergenic 50.0%
GCTGTTGAGCTGCATAAGAG+AGG + chr1_3:826787-826806 None:intergenic 50.0%
TATGCAGCTCAACAGCGCTT+AGG - chr1_3:826791-826810 Msa0095560:intron 50.0%
GAGCAGCCTAATTGAGACTC+CGG + chr1_3:826911-826930 None:intergenic 50.0%
! AGCAGTTTTACCGTCTGACG+TGG + chr1_3:827018-827037 None:intergenic 50.0%
TTTAGCAGGGTAGCTGCTAG+AGG - chr1_3:827044-827063 Msa0095560:intron 50.0%
TGCGGCACACCAATGCTATT+CGG - chr1_3:827172-827191 Msa0095560:intron 50.0%
TCCTGCAGGTACAGTGTTCA+CGG + chr1_3:827222-827241 None:intergenic 50.0%
AACACTGTACCTGCAGGAGA+TGG - chr1_3:827224-827243 Msa0095560:intron 50.0%
ACACTGTACCTGCAGGAGAT+GGG - chr1_3:827225-827244 Msa0095560:intron 50.0%
GCCTGTAGAACATGTTGCAG+TGG - chr1_3:827250-827269 Msa0095560:intron 50.0%
TGGGGAAATCAGGCCAATCT+GGG + chr1_3:827656-827675 None:intergenic 50.0%
ATGGGGAAATCAGGCCAATC+TGG + chr1_3:827657-827676 None:intergenic 50.0%
CACAGCTAGCATCCTAGACT+AGG + chr1_3:828550-828569 None:intergenic 50.0%
!! GTCCCACCATTTTGGTACAC+AGG + chr1_3:828850-828869 None:intergenic 50.0%
! AAAATGGTGGGACCCTTTCC+CGG - chr1_3:828857-828876 Msa0095560:intron 50.0%
TGTCCTCATGAGAGACCAAG+TGG - chr1_3:829095-829114 Msa0095560:intron 50.0%
GTCCTCATGAGAGACCAAGT+GGG - chr1_3:829096-829115 Msa0095560:intron 50.0%
GCATCCCCAACCTCAGAAAA+AGG + chr1_3:829806-829825 None:intergenic 50.0%
GGTTGGGGATGCTATTGTTG+CGG - chr1_3:829814-829833 Msa0095560:intron 50.0%
GCAGTTGATTGGGCAAAAGC+AGG - chr1_3:830203-830222 Msa0095560:intron 50.0%
!! GAAGGCATTGGACCAGTATG+AGG - chr1_3:830443-830462 Msa0095560:intron 50.0%
GCCGATAGTTTGGGCATGTA+TGG - chr1_3:830628-830647 Msa0095560:five_prime_UTR 50.0%
CGGAGTGCACAAAGAAGCTA+TGG + chr1_3:830670-830689 None:intergenic 50.0%
CGCCGCTATAATCTCTACCT+TGG - chr1_3:830710-830729 Msa0095560:intron 50.0%
TATTGTGCCAGAGCTGTCAC+AGG + chr1_3:830783-830802 None:intergenic 50.0%
ATTGGGCCCTATTGCCAACT+AGG - chr1_3:830811-830830 Msa0095560:intron 50.0%
TTGGGCCCTATTGCCAACTA+GGG - chr1_3:830812-830831 Msa0095560:intron 50.0%
TATCGGTCATGGTTGCGTCA+TGG - chr1_3:830970-830989 Msa0095560:intron 50.0%
ACGATTGCCATGGCCAATTC+GGG - chr1_3:831017-831036 Msa0095560:intron 50.0%
CAACACCATCCTTCCCGAAT+TGG + chr1_3:831033-831052 None:intergenic 50.0%
AAAGCTGGCATAACACGCCA+TGG + chr1_3:831056-831075 None:intergenic 50.0%
CGTGTTATGCCAGCTTTCCA+TGG - chr1_3:831059-831078 Msa0095560:intron 50.0%
GGGAAGCTAAAAGTCTGCCA+TGG + chr1_3:831079-831098 None:intergenic 50.0%
CAACCAATTCTCACCCCTAG+AGG + chr1_3:831154-831173 None:intergenic 50.0%
! CTCTAGGGGTGAGAATTGGT+TGG - chr1_3:831152-831171 Msa0095560:intron 50.0%
CTGCTATGCCACCAACAAAG+CGG - chr1_3:831784-831803 Msa0095560:intron 50.0%
CGCGACATGGAACAACTATC+TGG - chr1_3:831810-831829 Msa0095560:intron 50.0%
!! CGATATAATGGGTTCACCGG+TGG + chr1_3:832013-832032 None:intergenic 50.0%
AAAAAACCGGGAGGCTGAGC+TGG - chr1_3:821796-821815 Msa0095560:CDS 55.0%
GGAGGATGAAAAGACCGGGA+AGG - chr1_3:822303-822322 Msa0095560:intron 55.0%
GACCGGGAAGGAATGCATCA+AGG - chr1_3:822315-822334 Msa0095560:intron 55.0%
AGGGTGAGGCCACTACAAGA+TGG + chr1_3:822673-822692 None:intergenic 55.0%
! GGCTTCGACGATTTAGGGTG+AGG + chr1_3:822687-822706 None:intergenic 55.0%
CTGTCGTAGACTTGGAGGCA+AGG + chr1_3:822762-822781 None:intergenic 55.0%
CCCAGCTGGGTTTGATTCCA+AGG + chr1_3:822870-822889 None:intergenic 55.0%
GAAGTGAGATGGGAGATCCG+TGG - chr1_3:822904-822923 Msa0095560:intron 55.0%
TGAGATGGGAGATCCGTGGT+GGG - chr1_3:822908-822927 Msa0095560:intron 55.0%
!! AGAAGCGCCTCTGTCACAAC+TGG + chr1_3:822937-822956 None:intergenic 55.0%
!! GACAGAGGCGCTTCTGTTTG+AGG - chr1_3:822942-822961 Msa0095560:intron 55.0%
! GTTTGAGGTTGCATGGTGGG+TGG - chr1_3:822957-822976 Msa0095560:intron 55.0%
!! ATGGTGGGTGGTGAAGCTTC+TGG - chr1_3:822969-822988 Msa0095560:intron 55.0%
AGGCGTGTGATTGCTGTGGA+AGG - chr1_3:823000-823019 Msa0095560:intron 55.0%
GGCGTGTGATTGCTGTGGAA+GGG - chr1_3:823001-823020 Msa0095560:intron 55.0%
TAGCCTTCTGCCATTCCAGC+GGG - chr1_3:823314-823333 Msa0095560:intron 55.0%
AAACCCGCTGGAATGGCAGA+AGG + chr1_3:823320-823339 None:intergenic 55.0%
ACGAGTACCATACGCGTACC+CGG - chr1_3:825700-825719 Msa0095560:intron 55.0%
TACCATACGCGTACCCGGTA+CGG - chr1_3:825705-825724 Msa0095560:intron 55.0%
ATTCCTGGTGCCTCGAAGCT+TGG - chr1_3:825830-825849 Msa0095560:intron 55.0%
TTGCATTCGGCCAAGCTTCG+AGG + chr1_3:825843-825862 None:intergenic 55.0%
AGTGCCACCAGTCATTGTGC+CGG + chr1_3:825932-825951 None:intergenic 55.0%
ATGACTGGTGGCACTAGTGG+TGG - chr1_3:825937-825956 Msa0095560:intron 55.0%
! TGGTGGCACTAGTGGTGGAA+TGG - chr1_3:825942-825961 Msa0095560:intron 55.0%
GAGTCGGAGTTGGAAGGGAT+AGG - chr1_3:826178-826197 Msa0095560:CDS 55.0%
CAAGCTGCACCAGCCTTTGA+AGG - chr1_3:826348-826367 Msa0095560:CDS 55.0%
CATGCAGCAGCAGTGCAAAG+AGG + chr1_3:826718-826737 None:intergenic 55.0%
CAGGAACAGAGCAGAGAAGG+AGG + chr1_3:826749-826768 None:intergenic 55.0%
GAGGATACAGAGGGAGAGTC+AGG + chr1_3:826768-826787 None:intergenic 55.0%
CACTAGAGGTAGGGCCCATA+TGG + chr1_3:826872-826891 None:intergenic 55.0%
GTCTGACGTGGCCACTATCT+GGG + chr1_3:827006-827025 None:intergenic 55.0%
! CAGATAGTGGCCACGTCAGA+CGG - chr1_3:827005-827024 Msa0095560:intron 55.0%
CAGGGTAGCTGCTAGAGGTA+GGG - chr1_3:827049-827068 Msa0095560:intron 55.0%
!! TAGCATTGGTGTGCCGCAAC+TGG + chr1_3:827170-827189 None:intergenic 55.0%
GCGGCACACCAATGCTATTC+GGG - chr1_3:827173-827192 Msa0095560:intron 55.0%
ACTACGAGTCTGCTCCGTGA+TGG - chr1_3:827273-827292 Msa0095560:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr1_3:828794-828813 Msa0095560:intron 55.0%
! GGGAAAGGGTCCCACCATTT+TGG + chr1_3:828858-828877 None:intergenic 55.0%
ACTATAGCTACGCAGGGTCC+GGG + chr1_3:828878-828897 None:intergenic 55.0%
CACTATAGCTACGCAGGGTC+CGG + chr1_3:828879-828898 None:intergenic 55.0%
CGGTGCACTATAGCTACGCA+GGG + chr1_3:828884-828903 None:intergenic 55.0%
CCTGCGTAGCTATAGTGCAC+CGG - chr1_3:828882-828901 Msa0095560:intron 55.0%
CTGCGTAGCTATAGTGCACC+GGG - chr1_3:828883-828902 Msa0095560:intron 55.0%
CTCCCACTTGGTCTCTCATG+AGG + chr1_3:829101-829120 None:intergenic 55.0%
TTCATGGTGTGGGCTTGCCA+AGG + chr1_3:830730-830749 None:intergenic 55.0%
!! GGTTGCGTCATGGTGGATTG+CGG - chr1_3:830980-830999 Msa0095560:intron 55.0%
TTGCCATGGCCAATTCGGGA+AGG - chr1_3:831021-831040 Msa0095560:intron 55.0%
CATCCTTCCCGAATTGGCCA+TGG + chr1_3:831027-831046 None:intergenic 55.0%
CATGGCCAATTCGGGAAGGA+TGG - chr1_3:831025-831044 Msa0095560:intron 55.0%
TCCCATCACGGTCCACCATA+AGG - chr1_3:831095-831114 Msa0095560:intron 55.0%
!! GCCTTATGGTGGACCGTGAT+GGG + chr1_3:831099-831118 None:intergenic 55.0%
!! TGCCTTATGGTGGACCGTGA+TGG + chr1_3:831100-831119 None:intergenic 55.0%
AGCAACACACATCCTCTGGG+TGG - chr1_3:831702-831721 Msa0095560:intron 55.0%
AGGTATGCTGTTCCACCCAG+AGG + chr1_3:831717-831736 None:intergenic 55.0%
ATGTCGCGGAACCGCTTTGT+TGG + chr1_3:831798-831817 None:intergenic 55.0%
AACAAAGCGGTTCCGCGACA+TGG - chr1_3:831797-831816 Msa0095560:intron 55.0%
! CGTTGCTGTTCTCCATCCAC+AGG - chr1_3:831859-831878 Msa0095560:intron 55.0%
TGTGCAACTGGGTGTGGTGA+TGG - chr1_3:832077-832096 Msa0095560:five_prime_UTR 55.0%
GTGCAACTGGGTGTGGTGAT+GGG - chr1_3:832078-832097 Msa0095560:five_prime_UTR 55.0%
GTGAATCCAGCTCAGCCTCC+CGG + chr1_3:821805-821824 None:intergenic 60.0%
GGAGGCTGAGCTGGATTCAC+AGG - chr1_3:821805-821824 Msa0095560:CDS 60.0%
AGCCCATTCCCAACCCTTGC+TGG - chr1_3:822703-822722 Msa0095560:intron 60.0%
GCCCATTCCCAACCCTTGCT+GGG - chr1_3:822704-822723 Msa0095560:intron 60.0%
GCCCAGCAAGGGTTGGGAAT+GGG + chr1_3:822708-822727 None:intergenic 60.0%
TGCCCAGCAAGGGTTGGGAA+TGG + chr1_3:822709-822728 None:intergenic 60.0%
ATGGGTGCCCAGCAAGGGTT+GGG + chr1_3:822714-822733 None:intergenic 60.0%
AGCAGATGGGTGCCCAGCAA+GGG + chr1_3:822719-822738 None:intergenic 60.0%
TGGAGGAGAGGGGAGCAGAT+GGG + chr1_3:822732-822751 None:intergenic 60.0%
TTGGAGGAGAGGGGAGCAGA+TGG + chr1_3:822733-822752 None:intergenic 60.0%
GTGAGATGGGAGATCCGTGG+TGG - chr1_3:822907-822926 Msa0095560:intron 60.0%
GAGATGGGAGATCCGTGGTG+GGG - chr1_3:822909-822928 Msa0095560:intron 60.0%
TCACAACTGGCACCCCACCA+CGG + chr1_3:822924-822943 None:intergenic 60.0%
! TGGGGTGCCAGTTGTGACAG+AGG - chr1_3:822927-822946 Msa0095560:intron 60.0%
! AGGGAGGCGTGTGATTGCTG+TGG - chr1_3:822996-823015 Msa0095560:intron 60.0%
ACCATACGCGTACCCGGTAC+GGG - chr1_3:825706-825725 Msa0095560:intron 60.0%
TACAGGGTACGCACCCGTAC+CGG + chr1_3:825722-825741 None:intergenic 60.0%
TACGGGTGCGTACCCTGTAC+CGG - chr1_3:825723-825742 Msa0095560:intron 60.0%
!! CAAAGAGGAGGTGTCGTCGC+AGG + chr1_3:826703-826722 None:intergenic 60.0%
GCAGCAGCAGTGCAAAGAGG+AGG + chr1_3:826715-826734 None:intergenic 60.0%
CGTCTGACGTGGCCACTATC+TGG + chr1_3:827007-827026 None:intergenic 60.0%
GCAGGGTAGCTGCTAGAGGT+AGG - chr1_3:827048-827067 Msa0095560:intron 60.0%
GCCGTGAACACTGTACCTGC+AGG - chr1_3:827218-827237 Msa0095560:intron 60.0%
ACAGGCTACCCATCTCCTGC+AGG + chr1_3:827236-827255 None:intergenic 60.0%
CGCAAAGGCTCCTCCCTCTA+AGG + chr1_3:828745-828764 None:intergenic 60.0%
CCGGTGCACTATAGCTACGC+AGG + chr1_3:828885-828904 None:intergenic 60.0%
TAGCCAGCCTGTGACAGCTC+TGG - chr1_3:830773-830792 Msa0095560:intron 60.0%
CGGTCATGGTTGCGTCATGG+TGG - chr1_3:830973-830992 Msa0095560:intron 60.0%
!! GTCATGGTGGATTGCGGTGC+CGG - chr1_3:830986-831005 Msa0095560:intron 60.0%
!! CGGGAAGGATGGTGTTGCCA+TGG - chr1_3:831036-831055 Msa0095560:intron 60.0%
! TCGCGGAACCGCTTTGTTGG+TGG + chr1_3:831795-831814 None:intergenic 60.0%
CAGGATGCTGATGCCGGATC+TGG - chr1_3:832570-832589 Msa0095560:five_prime_UTR 60.0%
GATGGGTGCCCAGCAAGGGT+TGG + chr1_3:822715-822734 None:intergenic 65.0%
GAGCAGATGGGTGCCCAGCA+AGG + chr1_3:822720-822739 None:intergenic 65.0%
ACCCGTACCGGGTACGCGTA+TGG + chr1_3:825710-825729 None:intergenic 65.0%
ACAGGGTACGCACCCGTACC+GGG + chr1_3:825721-825740 None:intergenic 65.0%
TCGTCGCAGGCCCAGAGCAA+GGG + chr1_3:826690-826709 None:intergenic 65.0%
GCTACGCAGGGTCCGGGAAA+GGG + chr1_3:828872-828891 None:intergenic 65.0%
AGCTACGCAGGGTCCGGGAA+AGG + chr1_3:828873-828892 None:intergenic 65.0%
GTGCACTCCGGCCGCTATTG+TGG - chr1_3:830680-830699 Msa0095560:intron 65.0%
GTGCCAGAGCTGTCACAGGC+TGG + chr1_3:830779-830798 None:intergenic 65.0%
! CGGCCAAGCTTCGAGGCACC+AGG + chr1_3:825836-825855 None:intergenic 70.0%
GTCGTCGCAGGCCCAGAGCA+AGG + chr1_3:826691-826710 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 821657 832683 821657 ID=Msa0095560;Name=Msa0095560
chr1_3 mRNA 821657 832683 821657 ID=Msa0095560-mRNA-1;Parent=Msa0095560;Name=Msa0095560-mRNA-1;_AED=0.14;_eAED=0.14;_QI=835|1|0.92|1|0.66|0.76|13|0|548
chr1_3 exon 821657 821888 821657 ID=Msa0095560-mRNA-1:exon:76;Parent=Msa0095560-mRNA-1
chr1_3 exon 822460 822711 822460 ID=Msa0095560-mRNA-1:exon:75;Parent=Msa0095560-mRNA-1
chr1_3 exon 823775 824151 823775 ID=Msa0095560-mRNA-1:exon:74;Parent=Msa0095560-mRNA-1
chr1_3 exon 824233 824342 824233 ID=Msa0095560-mRNA-1:exon:73;Parent=Msa0095560-mRNA-1
chr1_3 exon 824604 824773 824604 ID=Msa0095560-mRNA-1:exon:72;Parent=Msa0095560-mRNA-1
chr1_3 exon 826004 826212 826004 ID=Msa0095560-mRNA-1:exon:71;Parent=Msa0095560-mRNA-1
chr1_3 exon 826293 826382 826293 ID=Msa0095560-mRNA-1:exon:70;Parent=Msa0095560-mRNA-1
chr1_3 exon 828049 828188 828049 ID=Msa0095560-mRNA-1:exon:69;Parent=Msa0095560-mRNA-1
chr1_3 exon 828337 828444 828337 ID=Msa0095560-mRNA-1:exon:68;Parent=Msa0095560-mRNA-1
chr1_3 exon 829314 829422 829314 ID=Msa0095560-mRNA-1:exon:67;Parent=Msa0095560-mRNA-1
chr1_3 exon 830548 830672 830548 ID=Msa0095560-mRNA-1:exon:66;Parent=Msa0095560-mRNA-1
chr1_3 exon 832004 832274 832004 ID=Msa0095560-mRNA-1:exon:65;Parent=Msa0095560-mRNA-1
chr1_3 exon 832395 832683 832395 ID=Msa0095560-mRNA-1:exon:64;Parent=Msa0095560-mRNA-1
chr1_3 five_prime_UTR 832395 832683 832395 ID=Msa0095560-mRNA-1:five_prime_utr;Parent=Msa0095560-mRNA-1
chr1_3 five_prime_UTR 832004 832274 832004 ID=Msa0095560-mRNA-1:five_prime_utr;Parent=Msa0095560-mRNA-1
chr1_3 five_prime_UTR 830548 830672 830548 ID=Msa0095560-mRNA-1:five_prime_utr;Parent=Msa0095560-mRNA-1
chr1_3 five_prime_UTR 829314 829422 829314 ID=Msa0095560-mRNA-1:five_prime_utr;Parent=Msa0095560-mRNA-1
chr1_3 five_prime_UTR 828404 828444 828404 ID=Msa0095560-mRNA-1:five_prime_utr;Parent=Msa0095560-mRNA-1
chr1_3 CDS 828337 828403 828337 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 828049 828188 828049 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 826293 826382 826293 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 826004 826212 826004 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 824604 824773 824604 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 824233 824342 824233 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 823775 824151 823775 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 822460 822711 822460 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
chr1_3 CDS 821657 821888 821657 ID=Msa0095560-mRNA-1:cds;Parent=Msa0095560-mRNA-1
Gene Sequence

>Msa0095560

ATGACTGGTGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAACAGTGGGATGACAAGATACTTGAAGGATATGTCAAAAAGAAAGAGGAGTATGAGTCGGAGTTGGAAGGGATAGGATCAATAAGAGATATGCGCGTTAAAGAGTCTGAAACAGAGGGGAAAAAAAGTGGACTTGAGAAGAAAATTCAATATGCTGAGATTGAAAAGAAAAGCATTGAAGATAAACTTTCAGATTTTAGTCGTGAAAAGGGGGCCATCAAAGAAGAAATTAAACGTATTAGTCCAGAACTGAAGAAGTTAAGAGATGCTGTTGAAAAGAGGAATAAAGAATTACATACTCTTGAGAAGAGGATAAATGAAATCACTGATCGGATTTACAAAGAATTCAGCAAGTCAGTTGGGGTTGCAAACATTCGTGAGTATGAAGAAAATCGACTCAAGGATGCTCAAAGTCTAGCAGACGAGAAGCTGAAACTGAGTAGCCAACTTTCGAAATTAAAATATCAGTTGGAGTATGAACAAAATCGGGACATGAGTTCACGAATTCAAGAATTGGAATCTTCCCTAAGTGCTTTGGAGATTGATTTAAAAGGGGTACAGACCAAAGAGGCTGAAGCAAAGTTAGCAGCAGAGAAAGTTACTGAAGAGATCAATCAGTTAAAAGATGAAGTTAAAGAGTGGAAATCAGAGTCAGAGGATCGTGAAAAGGAAATCCAGGAATGGAAGAAGAAGGCTTCGGCAGCCACAACAAGCTTAGCCAAACTTAATCGTTTGATTAGCTCAAAGGAGGCACAGATTGAGCAGTTGATTGGGCAAAAGCAGGAAATCGTAGAAAAGTGTGAACTAGAGCAAATTAGCCTTCCAATCATACAAGATCCTATGGATACTGATACTTCAACACCGGGTCCAGTATTTGACTTTGATAAGCTCAGTAGAACACTAAAAGATAGGAGACAATCTGACAGGGGTAAAATAGAGGTAGACTTTAAGCAAAAAATGGATGCATTGGTATCTGAGATTGAAAGAACAGCACCAAATTTGAAGGCATTGGACCAGTATGAGGCTCTGCTTGAAAAAGAAAGAGCTGTAACTGAAGAGTTTGAAGCTGTCAGGAAAGAAGAGAAGGAAAAAGCCGATAGATTTAATGAAGTAAAGCAGAAGAGATATGATTTGTTCATGGAGGCTTTCAACCATATCGCTGGTAATATAGATAAAATTTACAAACAACTTACAAAGAGCAACACACATCCTCTGGGTGGAACAGCATACCTAAATTTGGAAAATGAAGACGATCCATTTCTACATGGCATGAAGTACACTGCTATGCCACCAACAAAGCGGTTCCGCGACATGGAACAACTATCTGGCGGCGAAAAGACTGTTGCTGCGCTTGCGTTGCTGTTCTCCATCCACAGTTTTAGGCCTTCACCATTTTTCATACTGGATGAAGTTGATGCTGCATTGGACAACTTGAATGTTGCAAAGGTTGCTGGCTTTATTCGTTCAAAATCTTGTGAAGGAGCAAGGACTAATCAGGATGCTGATGCCGGATCTGGTTTTCAGAGTATTGTAATATCTCTTAAAGACAGCTTCTATGACAAAGCTGAAGCGTTAGTTGGGGTTTACAGGGACTCTGAAAGAGGGTAA

Protein sequence

>Msa0095560

MTGGTSGGMEARSKQWDDKILEGYVKKKEEYESELEGIGSIRDMRVKESETEGKKSGLEKKIQYAEIEKKSIEDKLSDFSREKGAIKEEIKRISPELKKLRDAVEKRNKELHTLEKRINEITDRIYKEFSKSVGVANIREYEENRLKDAQSLADEKLKLSSQLSKLKYQLEYEQNRDMSSRIQELESSLSALEIDLKGVQTKEAEAKLAAEKVTEEINQLKDEVKEWKSESEDREKEIQEWKKKASAATTSLAKLNRLISSKEAQIEQLIGQKQEIVEKCELEQISLPIIQDPMDTDTSTPGPVFDFDKLSRTLKDRRQSDRGKIEVDFKQKMDALVSEIERTAPNLKALDQYEALLEKERAVTEEFEAVRKEEKEKADRFNEVKQKRYDLFMEAFNHIAGNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGMKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARTNQDADAGSGFQSIVISLKDSFYDKAEALVGVYRDSERG*