Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420640 | G7JN31 | 89.744 | 390 | 14 | 5 | 1 | 369 | 1 | 385 | 0.0 | 653 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0106620 | Msa1420640 | 0.808852 | 2.526500e-50 | -8.615850e-47 |
| Msa1420640 | Msa1464090 | 0.810593 | 1.067195e-50 | -8.615850e-47 |
| Msa0624950 | Msa1420640 | 0.983975 | 3.115381e-159 | -8.615850e-47 |
| Msa0667720 | Msa1420640 | 0.899838 | 1.332304e-77 | -8.615850e-47 |
| Msa0237210 | Msa1420640 | 0.802549 | 5.320940e-49 | -8.615850e-47 |
| Msa1340200 | Msa1420640 | 0.830490 | 2.852580e-55 | -8.615850e-47 |
| Msa0389400 | Msa1420640 | 0.961142 | 2.326710e-119 | -8.615850e-47 |
| Msa0463270 | Msa1420640 | 0.801973 | 6.991562e-49 | -8.615850e-47 |
| Msa0999680 | Msa1420640 | 0.822065 | 2.890544e-53 | -8.615850e-47 |
| Msa0315690 | Msa1420640 | 0.802672 | 5.019505e-49 | -8.615850e-47 |
| Msa1161810 | Msa1420640 | 0.800865 | 1.179588e-48 | -8.615850e-47 |
| Msa0532920 | Msa1420640 | 0.947485 | 6.140304e-106 | -8.615850e-47 |
| Msa0899970 | Msa1420640 | 0.812641 | 3.827351e-51 | -8.615850e-47 |
| Msa0965080 | Msa1420640 | 0.814449 | 1.532271e-51 | -8.615850e-47 |
| Msa0965290 | Msa1420640 | 0.824005 | 1.020429e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1420640 | MtrunA17_Chr4g0006251 | 89.744 | 390 | 14 | 5 | 1 | 369 | 1 | 385 | 0.0 | 653 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTAACTGATTTACTTCT+TGG | 0.222003 | tig0024833:-57529 | None:intergenic |
| TTCTTTGGTGACACATTCTT+TGG | 0.227592 | tig0024833:-58036 | None:intergenic |
| AGGTGTAATTGTAGTTATTA+TGG | 0.236281 | tig0024833:+57898 | Msa1420640:CDS |
| TGTTCTGTCTGAATCTTCTT+TGG | 0.263057 | tig0024833:-58051 | None:intergenic |
| GATGAAAATGGAACCCTTCT+TGG | 0.264237 | tig0024833:-57808 | None:intergenic |
| CTTTGACAGAAGAAAGTATA+AGG | 0.276142 | tig0024833:+59866 | Msa1420640:CDS |
| GTTAAGAAGGAGAAGAATAA+AGG | 0.294047 | tig0024833:+57751 | Msa1420640:CDS |
| CAACTTCTTCATTGCCTACT+AGG | 0.319844 | tig0024833:+57956 | Msa1420640:CDS |
| ACTTCTTGGAACAGAATCTA+AGG | 0.322435 | tig0024833:-57515 | None:intergenic |
| TGTTCCTTTAACAACCCTTT+TGG | 0.323978 | tig0024833:-57491 | None:intergenic |
| AGCACCAAAAGGGTTGTTAA+AGG | 0.333890 | tig0024833:+57487 | Msa1420640:CDS |
| TGGTGTAGTAGCAAGGTTAA+TGG | 0.335546 | tig0024833:+57447 | Msa1420640:CDS |
| AATTGTAGTTATTATGGATA+TGG | 0.346675 | tig0024833:+57904 | Msa1420640:CDS |
| ATCAAAGACTGAAAGCTTAG+AGG | 0.361130 | tig0024833:+59903 | Msa1420640:CDS |
| GGTGTAGTAGCAAGGTTAAT+GGG | 0.365165 | tig0024833:+57448 | Msa1420640:CDS |
| TTAAGAAGGAGAAGAATAAA+GGG | 0.377122 | tig0024833:+57752 | Msa1420640:CDS |
| AAACAAGAAAATTCAAGAAA+TGG | 0.379420 | tig0024833:+57292 | Msa1420640:CDS |
| TACTTGGAAGAAGATGAAAA+TGG | 0.380603 | tig0024833:-57820 | None:intergenic |
| GAGAAAGTAAACAATAATAA+AGG | 0.383541 | tig0024833:+59775 | Msa1420640:CDS |
| AAGCTTAGAGGAAATTTGTT+TGG | 0.383976 | tig0024833:+59915 | Msa1420640:CDS |
| ATCTTTATTGCCAGTGTCCT+TGG | 0.392267 | tig0024833:+59738 | Msa1420640:intron |
| TTCTCTGTTGATGTCAGTGT+GGG | 0.417009 | tig0024833:-59806 | None:intergenic |
| GGAAATTGTGAGAGTTAAGA+AGG | 0.438622 | tig0024833:+57738 | Msa1420640:CDS |
| CTTCTTCCAAGTATAAATCA+AGG | 0.448989 | tig0024833:+57830 | Msa1420640:CDS |
| TTGACATCTAGAACTGAAAC+AGG | 0.458423 | tig0024833:-58093 | None:intergenic |
| CTCTTCAACATCTTCTTCCA+AGG | 0.463668 | tig0024833:-59755 | None:intergenic |
| GATGATTCTATTACTACTCC+TGG | 0.467242 | tig0024833:+57427 | Msa1420640:CDS |
| TCTAACCCTTGATTTATACT+TGG | 0.472162 | tig0024833:-57836 | None:intergenic |
| TATTATGGATATGGTAATGC+TGG | 0.473019 | tig0024833:+57913 | Msa1420640:CDS |
| TTGCCTACTAGGCAAAAGAA+AGG | 0.483545 | tig0024833:+57967 | Msa1420640:CDS |
| ATTCACTTCCAAGCACCAAA+AGG | 0.486866 | tig0024833:+57476 | Msa1420640:CDS |
| TTCACTTCCAAGCACCAAAA+GGG | 0.495119 | tig0024833:+57477 | Msa1420640:CDS |
| GCTTGAGTTTGATCAAAACA+TGG | 0.523774 | tig0024833:+57564 | Msa1420640:CDS |
| TTTGACAGAAGAAAGTATAA+GGG | 0.526153 | tig0024833:+59867 | Msa1420640:CDS |
| TGCCTACTAGGCAAAAGAAA+GGG | 0.548532 | tig0024833:+57968 | Msa1420640:CDS |
| AGTTAAAAGATGAACCAAGA+AGG | 0.554790 | tig0024833:+57794 | Msa1420640:CDS |
| CTTGAGTTTGATCAAAACAT+GGG | 0.565956 | tig0024833:+57565 | Msa1420640:CDS |
| CTTCTCTGTTGATGTCAGTG+TGG | 0.574065 | tig0024833:-59807 | None:intergenic |
| GTTAAAAGATGAACCAAGAA+GGG | 0.583184 | tig0024833:+57795 | Msa1420640:CDS |
| GATTCAGACAGAACATAGCA+TGG | 0.587606 | tig0024833:+58059 | Msa1420640:CDS |
| TTCTTCCAAGTATAAATCAA+GGG | 0.598400 | tig0024833:+57831 | Msa1420640:CDS |
| CTACTCCTGGTGTAGTAGCA+AGG | 0.604802 | tig0024833:+57440 | Msa1420640:CDS |
| AAACTTGAGAATAAAGAGCA+AGG | 0.615672 | tig0024833:+57717 | Msa1420640:CDS |
| ATTAACCTTGCTACTACACC+AGG | 0.623143 | tig0024833:-57445 | None:intergenic |
| GTGTAGTAGCAAGGTTAATG+GGG | 0.625800 | tig0024833:+57449 | Msa1420640:CDS |
| TCTCTGTTGATGTCAGTGTG+GGG | 0.670330 | tig0024833:-59805 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTGATTTAATATTTTTAA+TGG | + | tig0024833:58324-58343 | Msa1420640:intron | 10.0% |
| !! | AAATATTAAATGATCAAAAA+TGG | - | tig0024833:59953-59972 | None:intergenic | 10.0% |
| !! | AAAATAAAAATTAGCAACAA+GGG | - | tig0024833:58169-58188 | None:intergenic | 15.0% |
| !! | AAAAATAAAAATTAGCAACA+AGG | - | tig0024833:58170-58189 | None:intergenic | 15.0% |
| !!! | AATTCATTCCAAAATATTTT+AGG | - | tig0024833:58274-58293 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAAAAACATTGAG+AGG | - | tig0024833:58531-58550 | None:intergenic | 15.0% |
| !!! | TAAAAATAATTTTTAGAGTG+AGG | + | tig0024833:58653-58672 | Msa1420640:intron | 15.0% |
| !!! | TTAACTTTAAAAGAAAAAAG+AGG | + | tig0024833:58795-58814 | Msa1420640:intron | 15.0% |
| !!! | AATATTAGATTTTTTAGGTA+GGG | - | tig0024833:59302-59321 | None:intergenic | 15.0% |
| !!! | AAATATTAGATTTTTTAGGT+AGG | - | tig0024833:59303-59322 | None:intergenic | 15.0% |
| !!! | CTACAAATATTAGATTTTTT+AGG | - | tig0024833:59307-59326 | None:intergenic | 15.0% |
| !! | AAACAAGAAAATTCAAGAAA+TGG | + | tig0024833:57292-57311 | Msa1420640:CDS | 20.0% |
| !!! | CTTGATATTGATGATAAAAA+AGG | + | tig0024833:57670-57689 | Msa1420640:CDS | 20.0% |
| !!! | TATTGATGATAAAAAAGGTA+AGG | + | tig0024833:57675-57694 | Msa1420640:CDS | 20.0% |
| !! | AATTGTAGTTATTATGGATA+TGG | + | tig0024833:57904-57923 | Msa1420640:CDS | 20.0% |
| !! | TTGTGAATTACTTATTTACA+AGG | + | tig0024833:58210-58229 | Msa1420640:intron | 20.0% |
| !!! | ATTCCAAAATATTTTAGGTT+CGG | - | tig0024833:58269-58288 | None:intergenic | 20.0% |
| !!! | TAAATGCATTTTTAATCAAC+AGG | - | tig0024833:59082-59101 | None:intergenic | 20.0% |
| !! | TAACTGTAATCAAATATTGA+GGG | - | tig0024833:59151-59170 | None:intergenic | 20.0% |
| !! | TTCACAATTTAAACACATAA+AGG | - | tig0024833:59185-59204 | None:intergenic | 20.0% |
| !! | GTAAAAAAGTGAACATATTA+TGG | + | tig0024833:59559-59578 | Msa1420640:intron | 20.0% |
| !! | GAGAAAGTAAACAATAATAA+AGG | + | tig0024833:59775-59794 | Msa1420640:CDS | 20.0% |
| !! | ACATTTTCAGATGGATATAT+TGG | - | tig0024833:57373-57392 | None:intergenic | 25.0% |
| !! | ATTGTTTCAACATTTTCAGA+TGG | - | tig0024833:57382-57401 | None:intergenic | 25.0% |
| !! | AAGTTAACTGATTTACTTCT+TGG | - | tig0024833:57532-57551 | None:intergenic | 25.0% |
| ! | TTAAGAAGGAGAAGAATAAA+GGG | + | tig0024833:57752-57771 | Msa1420640:CDS | 25.0% |
| ! | TTCTTCCAAGTATAAATCAA+GGG | + | tig0024833:57831-57850 | Msa1420640:CDS | 25.0% |
| !!! | ATTTTTCAAGTGTTTCTACA+AGG | + | tig0024833:57878-57897 | Msa1420640:CDS | 25.0% |
| ! | AGGTGTAATTGTAGTTATTA+TGG | + | tig0024833:57898-57917 | Msa1420640:CDS | 25.0% |
| !! | AATGATTATGCTTTTCTCTA+TGG | + | tig0024833:58114-58133 | Msa1420640:CDS | 25.0% |
| ! | AAGTAATTCACAAACTAGAA+TGG | - | tig0024833:58203-58222 | None:intergenic | 25.0% |
| ! | GAATTACTTATTTACAAGGT+TGG | + | tig0024833:58214-58233 | Msa1420640:intron | 25.0% |
| !! | TTTCCGAACCTAAAATATTT+TGG | + | tig0024833:58263-58282 | Msa1420640:intron | 25.0% |
| !! | TTCTAACAATTTAGAGTCAT+TGG | + | tig0024833:58379-58398 | Msa1420640:intron | 25.0% |
| !! | TCTAACAATTTAGAGTCATT+GGG | + | tig0024833:58380-58399 | Msa1420640:intron | 25.0% |
| !! | ATGAATTGTGACTTTTGTAT+TGG | + | tig0024833:58499-58518 | Msa1420640:intron | 25.0% |
| ! | GTTGCGTATATAGTAAATTA+AGG | - | tig0024833:58621-58640 | None:intergenic | 25.0% |
| !! | TTTAGAGTGAGGAAATATTT+AGG | + | tig0024833:58664-58683 | Msa1420640:intron | 25.0% |
| ! | TTAGAGTGAGGAAATATTTA+GGG | + | tig0024833:58665-58684 | Msa1420640:intron | 25.0% |
| ! | TTTAAAAATATGAAGGACCT+TGG | - | tig0024833:58745-58764 | None:intergenic | 25.0% |
| ! | AAAGAGGAAACAAACATATA+CGG | + | tig0024833:58811-58830 | Msa1420640:intron | 25.0% |
| ! | GTAACTGTAATCAAATATTG+AGG | - | tig0024833:59152-59171 | None:intergenic | 25.0% |
| ! | AATTTAAACACATAAAGGCA+AGG | - | tig0024833:59180-59199 | None:intergenic | 25.0% |
| ! | TTGTGACAATATTCTTTGAA+AGG | + | tig0024833:59397-59416 | Msa1420640:intron | 25.0% |
| !!! | CGTAGTCTTTTTTTTATTAC+AGG | - | tig0024833:59456-59475 | None:intergenic | 25.0% |
| !!! | GGCAATTTTGTTTAATTCTT+TGG | + | tig0024833:59489-59508 | Msa1420640:intron | 25.0% |
| !!! | CTTTTTGACTTTAACTTTGT+TGG | - | tig0024833:59709-59728 | None:intergenic | 25.0% |
| ! | CAACAAAGTTAAAGTCAAAA+AGG | + | tig0024833:59707-59726 | Msa1420640:intron | 25.0% |
| !! | TTTGACAGAAGAAAGTATAA+GGG | + | tig0024833:59867-59886 | Msa1420640:CDS | 25.0% |
| ! | TTTTCAGATGGATATATTGG+TGG | - | tig0024833:57370-57389 | None:intergenic | 30.0% |
| CTTGAGTTTGATCAAAACAT+GGG | + | tig0024833:57565-57584 | Msa1420640:CDS | 30.0% | |
| !! | TTTTAGAGAAGTTCCTTCAA+TGG | + | tig0024833:57618-57637 | Msa1420640:CDS | 30.0% |
| ! | TTTTGCTTATCAACCATTGA+AGG | - | tig0024833:57634-57653 | None:intergenic | 30.0% |
| AAACTTGAGAATAAAGAGCA+AGG | + | tig0024833:57717-57736 | Msa1420640:CDS | 30.0% | |
| GTTAAGAAGGAGAAGAATAA+AGG | + | tig0024833:57751-57770 | Msa1420640:CDS | 30.0% | |
| AGTTAAAAGATGAACCAAGA+AGG | + | tig0024833:57794-57813 | Msa1420640:CDS | 30.0% | |
| GTTAAAAGATGAACCAAGAA+GGG | + | tig0024833:57795-57814 | Msa1420640:CDS | 30.0% | |
| TACTTGGAAGAAGATGAAAA+TGG | - | tig0024833:57823-57842 | None:intergenic | 30.0% | |
| CTTCTTCCAAGTATAAATCA+AGG | + | tig0024833:57830-57849 | Msa1420640:CDS | 30.0% | |
| TCTAACCCTTGATTTATACT+TGG | - | tig0024833:57839-57858 | None:intergenic | 30.0% | |
| ! | TATTATGGATATGGTAATGC+TGG | + | tig0024833:57913-57932 | Msa1420640:CDS | 30.0% |
| ! | TTAGCATCTAGAACTTTCAA+TGG | + | tig0024833:58297-58316 | Msa1420640:intron | 30.0% |
| TAGAGTGAGGAAATATTTAG+GGG | + | tig0024833:58666-58685 | Msa1420640:intron | 30.0% | |
| ACAAACACGTAGTAATCAAA+TGG | - | tig0024833:59381-59400 | None:intergenic | 30.0% | |
| TTAACTTTGTTGGAGAGAAT+AGG | - | tig0024833:59699-59718 | None:intergenic | 30.0% | |
| ! | CTTTGACAGAAGAAAGTATA+AGG | + | tig0024833:59866-59885 | Msa1420640:CDS | 30.0% |
| ! | AAGCTTAGAGGAAATTTGTT+TGG | + | tig0024833:59915-59934 | Msa1420640:CDS | 30.0% |
| GATGATTCTATTACTACTCC+TGG | + | tig0024833:57427-57446 | Msa1420640:CDS | 35.0% | |
| ! | TGTTCCTTTAACAACCCTTT+TGG | - | tig0024833:57494-57513 | None:intergenic | 35.0% |
| ACTTCTTGGAACAGAATCTA+AGG | - | tig0024833:57518-57537 | None:intergenic | 35.0% | |
| GCTTGAGTTTGATCAAAACA+TGG | + | tig0024833:57564-57583 | Msa1420640:CDS | 35.0% | |
| GGAAATTGTGAGAGTTAAGA+AGG | + | tig0024833:57738-57757 | Msa1420640:CDS | 35.0% | |
| !! | GGTTTGTTGAACCAAAAATG+AGG | + | tig0024833:57989-58008 | Msa1420640:CDS | 35.0% |
| TGAACCAAAAATGAGGAACA+AGG | + | tig0024833:57996-58015 | Msa1420640:CDS | 35.0% | |
| ! | TTCACCTTGTTCCTCATTTT+TGG | - | tig0024833:58003-58022 | None:intergenic | 35.0% |
| ! | TTCTTTGGTGACACATTCTT+TGG | - | tig0024833:58039-58058 | None:intergenic | 35.0% |
| TGTTCTGTCTGAATCTTCTT+TGG | - | tig0024833:58054-58073 | None:intergenic | 35.0% | |
| ! | TTGACATCTAGAACTGAAAC+AGG | - | tig0024833:58096-58115 | None:intergenic | 35.0% |
| ! | TCCTTACACAACTTGTTTAC+TGG | + | tig0024833:58418-58437 | Msa1420640:intron | 35.0% |
| ACCAGTAAACAAGTTGTGTA+AGG | - | tig0024833:58422-58441 | None:intergenic | 35.0% | |
| ! | TTACACAACTTGTTTACTGG+TGG | + | tig0024833:58421-58440 | Msa1420640:intron | 35.0% |
| AGAGTGAGGAAATATTTAGG+GGG | + | tig0024833:58667-58686 | Msa1420640:intron | 35.0% | |
| CAATGTTGCTCTTTGTAAGA+AGG | - | tig0024833:58937-58956 | None:intergenic | 35.0% | |
| AGACTACGAGTATTATTCTG+TGG | + | tig0024833:59468-59487 | Msa1420640:intron | 35.0% | |
| ATCAAAGACTGAAAGCTTAG+AGG | + | tig0024833:59903-59922 | Msa1420640:CDS | 35.0% | |
| ATTAACCTTGCTACTACACC+AGG | - | tig0024833:57448-57467 | None:intergenic | 40.0% | |
| TGGTGTAGTAGCAAGGTTAA+TGG | + | tig0024833:57447-57466 | Msa1420640:CDS | 40.0% | |
| GGTGTAGTAGCAAGGTTAAT+GGG | + | tig0024833:57448-57467 | Msa1420640:CDS | 40.0% | |
| GTGTAGTAGCAAGGTTAATG+GGG | + | tig0024833:57449-57468 | Msa1420640:CDS | 40.0% | |
| ATTCACTTCCAAGCACCAAA+AGG | + | tig0024833:57476-57495 | Msa1420640:CDS | 40.0% | |
| TTCACTTCCAAGCACCAAAA+GGG | + | tig0024833:57477-57496 | Msa1420640:CDS | 40.0% | |
| !!! | TTAACAACCCTTTTGGTGCT+TGG | - | tig0024833:57487-57506 | None:intergenic | 40.0% |
| AGCACCAAAAGGGTTGTTAA+AGG | + | tig0024833:57487-57506 | Msa1420640:CDS | 40.0% | |
| ! | ATGCTGAAGTTTTCACACGT+CGG | - | tig0024833:57597-57616 | None:intergenic | 40.0% |
| GATGAAAATGGAACCCTTCT+TGG | - | tig0024833:57811-57830 | None:intergenic | 40.0% | |
| CAACTTCTTCATTGCCTACT+AGG | + | tig0024833:57956-57975 | Msa1420640:CDS | 40.0% | |
| TTGCCTACTAGGCAAAAGAA+AGG | + | tig0024833:57967-57986 | Msa1420640:CDS | 40.0% | |
| TGCCTACTAGGCAAAAGAAA+GGG | + | tig0024833:57968-57987 | Msa1420640:CDS | 40.0% | |
| ! | AACCCTTTCTTTTGCCTAGT+AGG | - | tig0024833:57973-57992 | None:intergenic | 40.0% |
| GATTCAGACAGAACATAGCA+TGG | + | tig0024833:58059-58078 | Msa1420640:CDS | 40.0% | |
| !! | CTCTATGGAGCTGATTTTTC+AGG | + | tig0024833:58129-58148 | Msa1420640:CDS | 40.0% |
| ATCTTTATTGCCAGTGTCCT+TGG | + | tig0024833:59738-59757 | Msa1420640:intron | 40.0% | |
| CTCTTCAACATCTTCTTCCA+AGG | - | tig0024833:59758-59777 | None:intergenic | 40.0% | |
| TTCTCTGTTGATGTCAGTGT+GGG | - | tig0024833:59809-59828 | None:intergenic | 40.0% | |
| GTGAGGAAATATTTAGGGGG+CGG | + | tig0024833:58670-58689 | Msa1420640:intron | 45.0% | |
| AAGGACCTTGGACTTCTACT+TGG | - | tig0024833:58733-58752 | None:intergenic | 45.0% | |
| ACATCTTCTTCCAAGGACAC+TGG | - | tig0024833:59751-59770 | None:intergenic | 45.0% | |
| TCTCTGTTGATGTCAGTGTG+GGG | - | tig0024833:59808-59827 | None:intergenic | 45.0% | |
| CTTCTCTGTTGATGTCAGTG+TGG | - | tig0024833:59810-59829 | None:intergenic | 45.0% | |
| !!! | TTTTAAATTTAAAAATATGA+AGG | - | tig0024833:58752-58771 | None:intergenic | 5.0% |
| CTACTCCTGGTGTAGTAGCA+AGG | + | tig0024833:57440-57459 | Msa1420640:CDS | 50.0% | |
| CGTCACCAAGTAGAAGTCCA+AGG | + | tig0024833:58725-58744 | Msa1420640:intron | 50.0% | |
| GACAGTGACTCGTGCGATGT+CGG | - | tig0024833:58867-58886 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024833 | gene | 57286 | 59996 | 57286 | ID=Msa1420640;Name=Msa1420640 |
| tig0024833 | mRNA | 57286 | 59996 | 57286 | ID=Msa1420640-mRNA-1;Parent=Msa1420640;Name=Msa1420640-mRNA-1;_AED=0.04;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|369 |
| tig0024833 | exon | 57286 | 58150 | 57286 | ID=Msa1420640-mRNA-1:exon:1603;Parent=Msa1420640-mRNA-1 |
| tig0024833 | exon | 59752 | 59996 | 59752 | ID=Msa1420640-mRNA-1:exon:1604;Parent=Msa1420640-mRNA-1 |
| tig0024833 | CDS | 57286 | 58150 | 57286 | ID=Msa1420640-mRNA-1:cds;Parent=Msa1420640-mRNA-1 |
| tig0024833 | CDS | 59752 | 59996 | 59752 | ID=Msa1420640-mRNA-1:cds;Parent=Msa1420640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
