Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463270 | XP_003600894.1 | 95.278 | 593 | 28 | 0 | 1 | 593 | 1 | 593 | 0.0 | 1145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463270 | sp|Q8GV43|PLCD6_ARATH | 52.649 | 604 | 254 | 11 | 7 | 588 | 20 | 613 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463270 | G7JB93 | 95.278 | 593 | 28 | 0 | 1 | 593 | 1 | 593 | 0.0 | 1145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa0463270 | 0.810930 | 9.024464e-51 | -8.615850e-47 |
| Msa0030160 | Msa0463270 | 0.808986 | 2.364693e-50 | -8.615850e-47 |
| Msa0054820 | Msa0463270 | 0.802948 | 4.402709e-49 | -8.615850e-47 |
| Msa0065680 | Msa0463270 | -0.801866 | 7.354667e-49 | -8.615850e-47 |
| Msa0089980 | Msa0463270 | 0.811400 | 7.135964e-51 | -8.615850e-47 |
| Msa0090010 | Msa0463270 | 0.812593 | 3.920614e-51 | -8.615850e-47 |
| Msa0092410 | Msa0463270 | 0.818752 | 1.664069e-52 | -8.615850e-47 |
| Msa0101860 | Msa0463270 | 0.816100 | 6.581557e-52 | -8.615850e-47 |
| Msa0103250 | Msa0463270 | 0.808296 | 3.321362e-50 | -8.615850e-47 |
| Msa0106620 | Msa0463270 | 0.821930 | 3.107869e-53 | -8.615850e-47 |
| Msa0106710 | Msa0463270 | 0.805448 | 1.328223e-49 | -8.615850e-47 |
| Msa0112270 | Msa0463270 | 0.819792 | 9.642829e-53 | -8.615850e-47 |
| Msa0124320 | Msa0463270 | 0.810787 | 9.687863e-51 | -8.615850e-47 |
| Msa0125650 | Msa0463270 | 0.808024 | 3.793757e-50 | -8.615850e-47 |
| Msa0149300 | Msa0463270 | 0.816172 | 6.342134e-52 | -8.615850e-47 |
| Msa0152560 | Msa0463270 | 0.807301 | 5.405269e-50 | -8.615850e-47 |
| Msa0160960 | Msa0463270 | 0.812319 | 4.500180e-51 | -8.615850e-47 |
| Msa0170030 | Msa0463270 | 0.810000 | 1.432973e-50 | -8.615850e-47 |
| Msa0187030 | Msa0463270 | 0.840677 | 7.528182e-58 | -8.615850e-47 |
| Msa0187830 | Msa0463270 | 0.811973 | 5.356365e-51 | -8.615850e-47 |
| Msa0189040 | Msa0463270 | 0.809908 | 1.499628e-50 | -8.615850e-47 |
| Msa0201570 | Msa0463270 | 0.802626 | 5.131883e-49 | -8.615850e-47 |
| Msa0204840 | Msa0463270 | 0.806845 | 6.747559e-50 | -8.615850e-47 |
| Msa0215590 | Msa0463270 | 0.804022 | 2.636725e-49 | -8.615850e-47 |
| Msa0217700 | Msa0463270 | 0.849023 | 4.219739e-60 | -8.615850e-47 |
| Msa0220730 | Msa0463270 | 0.805683 | 1.185939e-49 | -8.615850e-47 |
| Msa0225220 | Msa0463270 | 0.832641 | 8.419747e-56 | -8.615850e-47 |
| Msa0227340 | Msa0463270 | 0.833393 | 5.472456e-56 | -8.615850e-47 |
| Msa0232020 | Msa0463270 | 0.807920 | 3.993856e-50 | -8.615850e-47 |
| Msa0237210 | Msa0463270 | 0.800772 | 1.232003e-48 | -8.615850e-47 |
| Msa0369230 | Msa0463270 | 0.917765 | 3.562710e-86 | -8.615850e-47 |
| Msa0408340 | Msa0463270 | 0.811980 | 5.336876e-51 | -8.615850e-47 |
| Msa0413690 | Msa0463270 | 0.819586 | 1.074669e-52 | -8.615850e-47 |
| Msa0416660 | Msa0463270 | 0.855004 | 8.434379e-62 | -8.615850e-47 |
| Msa0417330 | Msa0463270 | 0.813059 | 3.100665e-51 | -8.615850e-47 |
| Msa0432160 | Msa0463270 | 0.831875 | 1.302460e-55 | -8.615850e-47 |
| Msa0432670 | Msa0463270 | 0.805712 | 1.169198e-49 | -8.615850e-47 |
| Msa0443020 | Msa0463270 | 0.845104 | 4.999305e-59 | -8.615850e-47 |
| Msa0450400 | Msa0463270 | -0.803848 | 2.865479e-49 | -8.615850e-47 |
| Msa0455760 | Msa0463270 | 0.809348 | 1.978491e-50 | -8.615850e-47 |
| Msa0463270 | Msa0470880 | 0.807752 | 4.335606e-50 | -8.615850e-47 |
| Msa0463270 | Msa0476680 | 0.835404 | 1.711493e-56 | -8.615850e-47 |
| Msa0463270 | Msa0477620 | 0.803855 | 2.855964e-49 | -8.615850e-47 |
| Msa0463270 | Msa0501410 | 0.815747 | 7.888324e-52 | -8.615850e-47 |
| Msa0463270 | Msa0505330 | 0.827787 | 1.289919e-54 | -8.615850e-47 |
| Msa0463270 | Msa0506860 | 0.857696 | 1.368479e-62 | -8.615850e-47 |
| Msa0463270 | Msa0508880 | 0.897321 | 1.574953e-76 | -8.615850e-47 |
| Msa0463270 | Msa0521010 | 0.833461 | 5.262038e-56 | -8.615850e-47 |
| Msa0463270 | Msa0521670 | 0.801644 | 8.170281e-49 | -8.615850e-47 |
| Msa0463270 | Msa0532960 | 0.802378 | 5.773065e-49 | -8.615850e-47 |
| Msa0463270 | Msa0546520 | 0.809346 | 1.979727e-50 | -8.615850e-47 |
| Msa0463270 | Msa0559500 | 0.810756 | 9.837258e-51 | -8.615850e-47 |
| Msa0463270 | Msa0559510 | 0.803768 | 2.977637e-49 | -8.615850e-47 |
| Msa0463270 | Msa0562570 | 0.835602 | 1.525559e-56 | -8.615850e-47 |
| Msa0463270 | Msa0574600 | 0.814938 | 1.193725e-51 | -8.615850e-47 |
| Msa0463270 | Msa0579660 | 0.827710 | 1.345909e-54 | -8.615850e-47 |
| Msa0463270 | Msa0583360 | -0.802947 | 4.404034e-49 | -8.615850e-47 |
| Msa0463270 | Msa0607320 | 0.808872 | 2.501326e-50 | -8.615850e-47 |
| Msa0463270 | Msa0613710 | 0.807265 | 5.499291e-50 | -8.615850e-47 |
| Msa0463270 | Msa0614380 | 0.811241 | 7.724884e-51 | -8.615850e-47 |
| Msa0463270 | Msa0632370 | 0.803710 | 3.060625e-49 | -8.615850e-47 |
| Msa0463270 | Msa0673120 | 0.800008 | 1.763073e-48 | -8.615850e-47 |
| Msa0463270 | Msa0698290 | 0.801455 | 8.932814e-49 | -8.615850e-47 |
| Msa0463270 | Msa0708310 | 0.818718 | 1.693463e-52 | -8.615850e-47 |
| Msa0463270 | Msa0713510 | 0.815412 | 9.370092e-52 | -8.615850e-47 |
| Msa0463270 | Msa0714990 | 0.800993 | 1.110586e-48 | -8.615850e-47 |
| Msa0463270 | Msa0715420 | 0.816249 | 6.094126e-52 | -8.615850e-47 |
| Msa0463270 | Msa0733010 | 0.849580 | 2.951306e-60 | -8.615850e-47 |
| Msa0463270 | Msa0738030 | 0.841318 | 5.110110e-58 | -8.615850e-47 |
| Msa0463270 | Msa0741070 | 0.808382 | 3.183888e-50 | -8.615850e-47 |
| Msa0463270 | Msa0743930 | 0.808881 | 2.490747e-50 | -8.615850e-47 |
| Msa0463270 | Msa0750810 | 0.817437 | 3.298949e-52 | -8.615850e-47 |
| Msa0463270 | Msa0751260 | 0.826944 | 2.054546e-54 | -8.615850e-47 |
| Msa0463270 | Msa0756380 | 0.814572 | 1.438879e-51 | -8.615850e-47 |
| Msa0463270 | Msa0786980 | 0.820522 | 6.562424e-53 | -8.615850e-47 |
| Msa0463270 | Msa0795070 | 0.836379 | 9.687456e-57 | -8.615850e-47 |
| Msa0463270 | Msa0797250 | 0.807913 | 4.006241e-50 | -8.615850e-47 |
| Msa0463270 | Msa0797770 | 0.825665 | 4.141121e-54 | -8.615850e-47 |
| Msa0463270 | Msa0823540 | 0.808633 | 2.813302e-50 | -8.615850e-47 |
| Msa0463270 | Msa0828240 | 0.838046 | 3.628591e-57 | -8.615850e-47 |
| Msa0463270 | Msa0830230 | 0.805707 | 1.172299e-49 | -8.615850e-47 |
| Msa0463270 | Msa0835230 | 0.815853 | 7.472277e-52 | -8.615850e-47 |
| Msa0463270 | Msa0836650 | 0.809560 | 1.781313e-50 | -8.615850e-47 |
| Msa0463270 | Msa0855870 | 0.813836 | 2.092488e-51 | -8.615850e-47 |
| Msa0463270 | Msa0857940 | 0.833048 | 6.670939e-56 | -8.615850e-47 |
| Msa0463270 | Msa0867870 | 0.816445 | 5.509487e-52 | -8.615850e-47 |
| Msa0463270 | Msa0899970 | 0.854151 | 1.490143e-61 | -8.615850e-47 |
| Msa0463270 | Msa0902830 | 0.815102 | 1.097962e-51 | -8.615850e-47 |
| Msa0463270 | Msa0933760 | 0.812924 | 3.318795e-51 | -8.615850e-47 |
| Msa0463270 | Msa0934140 | 0.802215 | 6.235716e-49 | -8.615850e-47 |
| Msa0463270 | Msa0936390 | 0.827269 | 1.717369e-54 | -8.615850e-47 |
| Msa0463270 | Msa0958080 | 0.800521 | 1.386056e-48 | -8.615850e-47 |
| Msa0463270 | Msa0965080 | 0.844396 | 7.760721e-59 | -8.615850e-47 |
| Msa0463270 | Msa0965290 | 0.854040 | 1.604047e-61 | -8.615850e-47 |
| Msa0463270 | Msa0971650 | 0.809249 | 2.077544e-50 | -8.615850e-47 |
| Msa0463270 | Msa0975320 | 0.803041 | 4.212716e-49 | -8.615850e-47 |
| Msa0463270 | Msa0986510 | 0.816458 | 5.472316e-52 | -8.615850e-47 |
| Msa0463270 | Msa0992640 | 0.816244 | 6.109918e-52 | -8.615850e-47 |
| Msa0463270 | Msa0992680 | 0.809328 | 1.998084e-50 | -8.615850e-47 |
| Msa0463270 | Msa0999680 | 0.858795 | 6.444130e-63 | -8.615850e-47 |
| Msa0463270 | Msa1026480 | 0.810857 | 9.357931e-51 | -8.615850e-47 |
| Msa0463270 | Msa1029890 | 0.803305 | 3.714377e-49 | -8.615850e-47 |
| Msa0463270 | Msa1034500 | 0.841978 | 3.423771e-58 | -8.615850e-47 |
| Msa0463270 | Msa1038080 | 0.809345 | 1.981582e-50 | -8.615850e-47 |
| Msa0463270 | Msa1043120 | 0.831073 | 2.052287e-55 | -8.615850e-47 |
| Msa0463270 | Msa1063420 | 0.814582 | 1.431386e-51 | -8.615850e-47 |
| Msa0463270 | Msa1080960 | 0.817340 | 3.468590e-52 | -8.615850e-47 |
| Msa0463270 | Msa1084640 | 0.825899 | 3.644295e-54 | -8.615850e-47 |
| Msa0463270 | Msa1089450 | 0.818573 | 1.827129e-52 | -8.615850e-47 |
| Msa0463270 | Msa1111380 | 0.815397 | 9.440135e-52 | -8.615850e-47 |
| Msa0463270 | Msa1155170 | -0.800103 | 1.686033e-48 | -8.615850e-47 |
| Msa0463270 | Msa1183890 | 0.804993 | 1.654166e-49 | -8.615850e-47 |
| Msa0463270 | Msa1188180 | 0.808174 | 3.524995e-50 | -8.615850e-47 |
| Msa0463270 | Msa1225860 | -0.808050 | 3.746968e-50 | -8.615850e-47 |
| Msa0463270 | Msa1238820 | 0.802020 | 6.840383e-49 | -8.615850e-47 |
| Msa0463270 | Msa1283740 | 0.812301 | 4.541224e-51 | -8.615850e-47 |
| Msa0463270 | Msa1340200 | 0.805583 | 1.244630e-49 | -8.615850e-47 |
| Msa0463270 | Msa1345810 | 0.813793 | 2.137818e-51 | -8.615850e-47 |
| Msa0463270 | Msa1353890 | 0.818028 | 2.427097e-52 | -8.615850e-47 |
| Msa0463270 | Msa1358240 | 0.806235 | 9.075512e-50 | -8.615850e-47 |
| Msa0463270 | Msa1382790 | 0.802662 | 5.044917e-49 | -8.615850e-47 |
| Msa0463270 | Msa1383680 | 0.802858 | 4.594810e-49 | -8.615850e-47 |
| Msa0463270 | Msa1400340 | 0.826570 | 2.522546e-54 | -8.615850e-47 |
| Msa0463270 | Msa1416730 | 0.818853 | 1.578333e-52 | -8.615850e-47 |
| Msa0463270 | Msa1418280 | 0.807156 | 5.800619e-50 | -8.615850e-47 |
| Msa0463270 | Msa1420640 | 0.801973 | 6.991562e-49 | -8.615850e-47 |
| Msa0463270 | Msa1424630 | 0.815295 | 9.948349e-52 | -8.615850e-47 |
| Msa0463270 | Msa1426710 | 0.807579 | 4.719172e-50 | -8.615850e-47 |
| Msa0463270 | Msa1430550 | 0.845534 | 3.824480e-59 | -8.615850e-47 |
| Msa0463270 | Msa1445390 | -0.800177 | 1.628634e-48 | -8.615850e-47 |
| Msa0463270 | Msa1446780 | 0.806471 | 8.094123e-50 | -8.615850e-47 |
| Msa0463270 | Msa1457160 | 0.806273 | 8.910720e-50 | -8.615850e-47 |
| Msa0463270 | Msa1458340 | 0.803270 | 3.777678e-49 | -8.615850e-47 |
| Msa0463270 | Msa1462360 | 0.823203 | 1.571390e-53 | -8.615850e-47 |
| Msa0240900 | Msa0463270 | 0.816638 | 4.987725e-52 | -8.615850e-47 |
| Msa0241140 | Msa0463270 | 0.819389 | 1.191404e-52 | -8.615850e-47 |
| Msa0244880 | Msa0463270 | 0.814919 | 1.205629e-51 | -8.615850e-47 |
| Msa0264830 | Msa0463270 | 0.833502 | 5.139274e-56 | -8.615850e-47 |
| Msa0269560 | Msa0463270 | 0.838866 | 2.229460e-57 | -8.615850e-47 |
| Msa0271540 | Msa0463270 | 0.801321 | 9.513967e-49 | -8.615850e-47 |
| Msa0271550 | Msa0463270 | 0.826299 | 2.928289e-54 | -8.615850e-47 |
| Msa0274980 | Msa0463270 | 0.803953 | 2.725977e-49 | -8.615850e-47 |
| Msa0283470 | Msa0463270 | 0.814774 | 1.297849e-51 | -8.615850e-47 |
| Msa0302870 | Msa0463270 | 0.839344 | 1.676343e-57 | -8.615850e-47 |
| Msa0307310 | Msa0463270 | 0.805492 | 1.300541e-49 | -8.615850e-47 |
| Msa0312530 | Msa0463270 | 0.802119 | 6.524364e-49 | -8.615850e-47 |
| Msa0315690 | Msa0463270 | 0.805845 | 1.096314e-49 | -8.615850e-47 |
| Msa0317970 | Msa0463270 | 0.819668 | 1.029094e-52 | -8.615850e-47 |
| Msa0319290 | Msa0463270 | 0.804776 | 1.836091e-49 | -8.615850e-47 |
| Msa0333650 | Msa0463270 | 0.811937 | 5.454070e-51 | -8.615850e-47 |
| Msa0340340 | Msa0463270 | 0.838034 | 3.654502e-57 | -8.615850e-47 |
| Msa0342010 | Msa0463270 | 0.824224 | 9.064121e-54 | -8.615850e-47 |
| Msa0348550 | Msa0463270 | 0.819460 | 1.147940e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463270 | MtrunA17_Chr3g0113471 | 95.278 | 593 | 28 | 0 | 1 | 593 | 1 | 593 | 0.0 | 1145 |
| Msa0463270 | MtrunA17_Chr3g0113521 | 85.354 | 594 | 84 | 2 | 1 | 593 | 1 | 592 | 0.0 | 1038 |
| Msa0463270 | MtrunA17_Chr5g0437041 | 58.097 | 599 | 231 | 9 | 7 | 588 | 12 | 607 | 0.0 | 684 |
| Msa0463270 | MtrunA17_Chr5g0437061 | 61.523 | 499 | 160 | 7 | 113 | 587 | 1 | 491 | 0.0 | 606 |
| Msa0463270 | MtrunA17_Chr5g0430181 | 52.696 | 575 | 254 | 8 | 24 | 585 | 22 | 591 | 0.0 | 604 |
| Msa0463270 | MtrunA17_Chr5g0437081 | 51.846 | 596 | 266 | 9 | 1 | 585 | 1 | 586 | 0.0 | 596 |
| Msa0463270 | MtrunA17_Chr3g0113531 | 50.084 | 595 | 280 | 8 | 2 | 587 | 6 | 592 | 0.0 | 567 |
| Msa0463270 | MtrunA17_Chr3g0112551 | 51.107 | 587 | 259 | 8 | 12 | 587 | 2 | 571 | 0.0 | 564 |
| Msa0463270 | MtrunA17_Chr5g0430191 | 46.259 | 588 | 277 | 13 | 3 | 585 | 17 | 570 | 3.75e-171 | 498 |
| Msa0463270 | MtrunA17_Chr5g0437051 | 42.857 | 91 | 48 | 1 | 23 | 109 | 18 | 108 | 1.90e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463270 | AT2G40116.1 | 52.649 | 604 | 254 | 11 | 7 | 588 | 20 | 613 | 0.0 | 618 |
| Msa0463270 | AT5G58690.3 | 50.868 | 576 | 269 | 5 | 13 | 587 | 15 | 577 | 0.0 | 580 |
| Msa0463270 | AT5G58690.1 | 50.868 | 576 | 269 | 5 | 13 | 587 | 15 | 577 | 0.0 | 580 |
| Msa0463270 | AT5G58690.2 | 51.138 | 571 | 265 | 5 | 18 | 587 | 1 | 558 | 0.0 | 578 |
| Msa0463270 | AT3G08510.2 | 51.361 | 588 | 269 | 10 | 1 | 583 | 1 | 576 | 0.0 | 577 |
| Msa0463270 | AT3G08510.1 | 51.361 | 588 | 269 | 10 | 1 | 583 | 1 | 576 | 0.0 | 577 |
| Msa0463270 | AT5G58700.3 | 50.085 | 591 | 280 | 7 | 7 | 587 | 11 | 596 | 0.0 | 573 |
| Msa0463270 | AT5G58700.1 | 50.085 | 591 | 280 | 7 | 7 | 587 | 11 | 596 | 0.0 | 573 |
| Msa0463270 | AT3G55940.1 | 49.747 | 593 | 274 | 10 | 1 | 583 | 1 | 579 | 0.0 | 568 |
| Msa0463270 | AT5G58700.2 | 54.098 | 488 | 212 | 5 | 109 | 587 | 4 | 488 | 0.0 | 526 |
| Msa0463270 | AT3G08510.4 | 48.129 | 588 | 259 | 11 | 1 | 583 | 1 | 547 | 1.84e-179 | 519 |
| Msa0463270 | AT3G08510.3 | 48.129 | 588 | 259 | 11 | 1 | 583 | 1 | 547 | 1.84e-179 | 519 |
| Msa0463270 | AT5G58670.1 | 47.627 | 590 | 273 | 10 | 3 | 588 | 2 | 559 | 5.24e-177 | 513 |
| Msa0463270 | AT4G38530.1 | 46.088 | 588 | 278 | 12 | 6 | 588 | 5 | 558 | 2.33e-174 | 506 |
| Msa0463270 | AT3G47290.1 | 40.434 | 507 | 245 | 9 | 82 | 585 | 76 | 528 | 2.61e-113 | 348 |
| Msa0463270 | AT3G47290.2 | 39.879 | 494 | 240 | 8 | 82 | 572 | 76 | 515 | 2.02e-109 | 340 |
| Msa0463270 | AT3G47220.1 | 40.039 | 512 | 239 | 15 | 82 | 585 | 77 | 528 | 1.62e-102 | 320 |
Find 129 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTAATTGAACTTGATTTA+TGG | 0.148872 | 3_3:+62608862 | Msa0463270:CDS |
| TGGACAATTGGTATCCTATT+TGG | 0.164917 | 3_3:+62611044 | Msa0463270:CDS |
| AGAACAAAATTGCACCTTAT+TGG | 0.178097 | 3_3:+62606725 | Msa0463270:CDS |
| AATGAGTAAGAAAATGATTT+TGG | 0.189464 | 3_3:-62606416 | None:intergenic |
| TGTGACACGTTCATTTATTT+TGG | 0.198420 | 3_3:+62611339 | Msa0463270:three_prime_UTR |
| GTGAATCCGGTTCCCATATT+TGG | 0.205184 | 3_3:-62611306 | None:intergenic |
| TGTTTCAAAGCCTCTATAAT+TGG | 0.221396 | 3_3:-62608831 | None:intergenic |
| AGTGCATACCTCATCCTTTA+AGG | 0.223441 | 3_3:-62606871 | None:intergenic |
| CTCCTTTAGGATAAATTCTT+AGG | 0.242663 | 3_3:-62610099 | None:intergenic |
| CAGATGGCAAATAAAATATT+TGG | 0.245584 | 3_3:+62609447 | Msa0463270:intron |
| TGATTTCAATGGTCCCTTAA+AGG | 0.259016 | 3_3:+62606857 | Msa0463270:CDS |
| GATTGAACACGTTCTCCTTT+AGG | 0.264859 | 3_3:-62610112 | None:intergenic |
| AGACGTCGTTCATCCAAATA+TGG | 0.269481 | 3_3:+62611293 | Msa0463270:exon |
| AAATTGCACCTTATTGGATT+TGG | 0.270742 | 3_3:+62606731 | Msa0463270:CDS |
| ATTTCTTGAATTAGAAATTC+AGG | 0.279667 | 3_3:-62610662 | None:intergenic |
| GTGTGACAGGTTTGTATTGC+TGG | 0.315703 | 3_3:+62610980 | Msa0463270:intron |
| CTCATGGAGCCGACCTAATT+AGG | 0.322220 | 3_3:+62609966 | Msa0463270:CDS |
| GTTCTATGGCAGAAAGTAAA+TGG | 0.329143 | 3_3:+62609755 | Msa0463270:intron |
| AAACATTTGGTTAGTGCAAC+TGG | 0.337432 | 3_3:-62609043 | None:intergenic |
| AGTTTGATAGGTACCTAATT+AGG | 0.337781 | 3_3:-62609979 | None:intergenic |
| AGAACCACCTTTAGATCTTA+AGG | 0.339714 | 3_3:+62606623 | Msa0463270:CDS |
| TCAGTTTGAGGATGCTCCTT+TGG | 0.341714 | 3_3:-62609561 | None:intergenic |
| GGACACAATTCCTACCTTAC+TGG | 0.347434 | 3_3:+62608777 | Msa0463270:CDS |
| TCGAACTCTTCGTCCCAAAT+AGG | 0.347640 | 3_3:-62611058 | None:intergenic |
| GGACAATTGGTATCCTATTT+GGG | 0.357053 | 3_3:+62611045 | Msa0463270:CDS |
| AATGAAACTCGCAGTATTGC+AGG | 0.368526 | 3_3:+62606795 | Msa0463270:CDS |
| TCACATTATTTCATGTATAC+AGG | 0.373381 | 3_3:+62608756 | Msa0463270:CDS |
| ATCCGGAGCAACGCGAGCTC+TGG | 0.380866 | 3_3:-62611097 | None:intergenic |
| GCAAAGTTATCCTGAAGTTT+TGG | 0.384127 | 3_3:-62609139 | None:intergenic |
| TCCATTTGACACATGATTGT+TGG | 0.385768 | 3_3:-62609589 | None:intergenic |
| TGTATTCACGTGCACCTTGC+TGG | 0.389565 | 3_3:-62609820 | None:intergenic |
| CAGAGCTAAGACATGGATTT+CGG | 0.389763 | 3_3:+62611182 | Msa0463270:CDS |
| AGTTGCACTAACCAAATGTT+TGG | 0.392870 | 3_3:+62609045 | Msa0463270:CDS |
| CCACCTAACACCAAAACTTC+AGG | 0.394243 | 3_3:+62609129 | Msa0463270:CDS |
| TATAAACTCTCTTCCACAAA+AGG | 0.407161 | 3_3:+62606469 | Msa0463270:five_prime_UTR |
| ATTGCAGGTACATCATGATA+TGG | 0.407698 | 3_3:+62608722 | Msa0463270:intron |
| GATTGGCTCCAAATCCAATA+AGG | 0.408541 | 3_3:-62606739 | None:intergenic |
| ACAGGAACAACAAGATTCTA+TGG | 0.416912 | 3_3:+62609641 | Msa0463270:CDS |
| CAGTATTGCAGGACTCAGTT+TGG | 0.416929 | 3_3:+62606806 | Msa0463270:CDS |
| TAAATGTGGCCTAAAATTTG+TGG | 0.417479 | 3_3:-62610134 | None:intergenic |
| CTAACCTTTGTGTAAAAGTC+TGG | 0.418095 | 3_3:-62610892 | None:intergenic |
| TGAACATCCCTTGCATCAAC+CGG | 0.429950 | 3_3:-62610607 | None:intergenic |
| AAAGATAGACTAAAAGTTGA+TGG | 0.432276 | 3_3:+62609887 | Msa0463270:CDS |
| CAACAGGTAAAAGTATATAA+AGG | 0.432650 | 3_3:+62610817 | Msa0463270:intron |
| ACAATGTATTTAAAGTTTCA+AGG | 0.432965 | 3_3:-62611270 | None:intergenic |
| TTCCAGAGCTCGCGTTGCTC+CGG | 0.434663 | 3_3:+62611095 | Msa0463270:CDS |
| TTGATGGTGGTAAAGTTAGA+AGG | 0.435066 | 3_3:+62609903 | Msa0463270:CDS |
| GGTGGTATTAAAGTAGTTCA+TGG | 0.435995 | 3_3:+62608903 | Msa0463270:CDS |
| CTGCTTCTAGATGATTTCAA+TGG | 0.441202 | 3_3:+62606846 | Msa0463270:CDS |
| ACATAGAACAACACTTTCAT+AGG | 0.443060 | 3_3:+62606377 | Msa0463270:five_prime_UTR |
| CGAGCTCTGGAACAGTCAAT+TGG | 0.444259 | 3_3:-62611084 | None:intergenic |
| CGAAGTGAAAGATAAAGATA+AGG | 0.444805 | 3_3:+62611120 | Msa0463270:CDS |
| TTCTATGGCTAAACTGAAAA+CGG | 0.445057 | 3_3:+62609656 | Msa0463270:CDS |
| GGATCAACTACTTAGATTCA+TGG | 0.446194 | 3_3:+62606689 | Msa0463270:CDS |
| TAGTAAATTGATTTCCAGTA+AGG | 0.448160 | 3_3:-62608791 | None:intergenic |
| CAAGTGTAAAGATGGACAAT+TGG | 0.450323 | 3_3:+62611032 | Msa0463270:CDS |
| TCAAGAAATTGTACATAATG+AGG | 0.452705 | 3_3:+62610676 | Msa0463270:CDS |
| CCATGTCTTAGCTCTGATAC+AGG | 0.454126 | 3_3:-62611175 | None:intergenic |
| TTTGGAGCCAATCATTGAAA+AGG | 0.458273 | 3_3:+62606749 | Msa0463270:CDS |
| CTTTATCTTTCACTTCGATC+CGG | 0.459942 | 3_3:-62611114 | None:intergenic |
| TCTTCTAAAGTTAGAATCAC+TGG | 0.460622 | 3_3:-62609106 | None:intergenic |
| GTTTGAGGATGCTCCTTTGG+TGG | 0.464803 | 3_3:-62609558 | None:intergenic |
| ACACATTTAATGCGTGAATC+CGG | 0.466929 | 3_3:-62611319 | None:intergenic |
| CCACATTTAGGGTGGATGTA+TGG | 0.468165 | 3_3:+62610148 | Msa0463270:CDS |
| GTGCATACCTCATCCTTTAA+GGG | 0.469745 | 3_3:-62606870 | None:intergenic |
| CCACCATCTTTAGTTGAAGA+TGG | 0.471280 | 3_3:-62608885 | None:intergenic |
| TGGCCATCTTCAACTAAAGA+TGG | 0.471964 | 3_3:+62608882 | Msa0463270:CDS |
| ATCCTAAGAATTTATCCTAA+AGG | 0.472397 | 3_3:+62610097 | Msa0463270:CDS |
| GAAGAAAACAAGTGTAAAGA+TGG | 0.472423 | 3_3:+62611024 | Msa0463270:CDS |
| GAAGTGAAAGATAAAGATAA+GGG | 0.476695 | 3_3:+62611121 | Msa0463270:CDS |
| GATGGTTGCATTCAATATGC+AGG | 0.480468 | 3_3:+62610177 | Msa0463270:CDS |
| TGTAGCTTTGTGTGACAGAA+AGG | 0.481038 | 3_3:+62611207 | Msa0463270:CDS |
| GAAAGTAAATGGTGAAGAGA+TGG | 0.484846 | 3_3:+62609766 | Msa0463270:intron |
| AAAGATTCCTTAAGATCTAA+AGG | 0.489446 | 3_3:-62606630 | None:intergenic |
| GTTCATCCAAATATGGGAAC+CGG | 0.497412 | 3_3:+62611300 | Msa0463270:three_prime_UTR |
| GCCAACAATCATGTGTCAAA+TGG | 0.498994 | 3_3:+62609588 | Msa0463270:CDS |
| CAATGGTCCCTTAAAGGATG+AGG | 0.514587 | 3_3:+62606863 | Msa0463270:CDS |
| AAACATTTGATTACAATCCA+TGG | 0.524741 | 3_3:+62609842 | Msa0463270:CDS |
| AAATCTGCTTCTGAGTCTCA+TGG | 0.528727 | 3_3:+62609950 | Msa0463270:CDS |
| CAGGTTTGTATTGCTGGAGT+GGG | 0.531989 | 3_3:+62610986 | Msa0463270:intron |
| CAGTGATAAACCAATTATAG+AGG | 0.533232 | 3_3:+62608821 | Msa0463270:CDS |
| GTAAAAGTATATAAAGGAGT+TGG | 0.544857 | 3_3:+62610823 | Msa0463270:CDS |
| TGGTGAAAATTACATGTCAA+AGG | 0.547867 | 3_3:+62606668 | Msa0463270:CDS |
| CAAGGGATGTTCAAAGCGAA+TGG | 0.550048 | 3_3:+62610617 | Msa0463270:CDS |
| GACGTCGTTCATCCAAATAT+GGG | 0.552427 | 3_3:+62611294 | Msa0463270:exon |
| TTGTTGGCACCATCAGTTTG+AGG | 0.553822 | 3_3:-62609573 | None:intergenic |
| AAGTATATAAAGGAGTTGGT+TGG | 0.554621 | 3_3:+62610827 | Msa0463270:CDS |
| AAATCACTCCGGTTGATGCA+AGG | 0.554660 | 3_3:+62610599 | Msa0463270:CDS |
| ATTATAGAGGCTTTGAAACA+AGG | 0.556418 | 3_3:+62608834 | Msa0463270:CDS |
| CCTGTATCAGAGCTAAGACA+TGG | 0.557267 | 3_3:+62611175 | Msa0463270:CDS |
| TGAAGATGAAACATGGGGAC+AGG | 0.561303 | 3_3:+62609623 | Msa0463270:CDS |
| ATCTGCTGAAGGTATAATGT+TGG | 0.561315 | 3_3:+62611396 | Msa0463270:three_prime_UTR |
| AATCACTCCGGTTGATGCAA+GGG | 0.562532 | 3_3:+62610600 | Msa0463270:CDS |
| ATAAACTCTCTTCCACAAAA+GGG | 0.564431 | 3_3:+62606470 | Msa0463270:five_prime_UTR |
| TATGAAAGTGTTGTTCTATG+TGG | 0.569005 | 3_3:-62606375 | None:intergenic |
| GTAGCTTTGTGTGACAGAAA+GGG | 0.571071 | 3_3:+62611208 | Msa0463270:CDS |
| ACAGGTTTGTATTGCTGGAG+TGG | 0.572958 | 3_3:+62610985 | Msa0463270:intron |
| AAATTGATTTCCAGTAAGGT+AGG | 0.573386 | 3_3:-62608787 | None:intergenic |
| TAAACTGAAAACGGAGGACA+TGG | 0.574573 | 3_3:+62609665 | Msa0463270:CDS |
| ATTTAAAGATAATCTGCTGA+AGG | 0.582512 | 3_3:+62611385 | Msa0463270:three_prime_UTR |
| ACCTTTGTGTAAAAGTCTGG+TGG | 0.590211 | 3_3:-62610889 | None:intergenic |
| GGATGTTCAAAGCGAATGGA+GGG | 0.590594 | 3_3:+62610621 | Msa0463270:CDS |
| TTCAAAGCGAATGGAGGGTG+CGG | 0.590959 | 3_3:+62610626 | Msa0463270:CDS |
| TACATGAAATAATGTGACAA+GGG | 0.596814 | 3_3:-62608750 | None:intergenic |
| AGGGGCATGGCAAATCACTC+CGG | 0.598085 | 3_3:+62610588 | Msa0463270:intron |
| TATATCAACTAAACCACCAA+AGG | 0.600524 | 3_3:+62609545 | Msa0463270:CDS |
| AATCGTCTGAAGATGAAACA+TGG | 0.601806 | 3_3:+62609616 | Msa0463270:CDS |
| GGGATGTTCAAAGCGAATGG+AGG | 0.604762 | 3_3:+62610620 | Msa0463270:CDS |
| GATAGACTAAAAGTTGATGG+TGG | 0.608816 | 3_3:+62609890 | Msa0463270:CDS |
| GTGGATGTATGGAGCTCAGA+TGG | 0.609593 | 3_3:+62610159 | Msa0463270:CDS |
| TATATTTATGCATGAGATCG+AGG | 0.610657 | 3_3:-62606323 | None:intergenic |
| CCATACATCCACCCTAAATG+TGG | 0.621111 | 3_3:-62610148 | None:intergenic |
| ATCCATGGTGGAAAATCAGA+AGG | 0.621784 | 3_3:+62609857 | Msa0463270:CDS |
| ATCGTCTGAAGATGAAACAT+GGG | 0.625646 | 3_3:+62609617 | Msa0463270:CDS |
| TATTTGCTCATTCAAAACAG+AGG | 0.626026 | 3_3:+62606503 | Msa0463270:five_prime_UTR |
| TGATAGGTACCTAATTAGGT+CGG | 0.627187 | 3_3:-62609975 | None:intergenic |
| AAGGAGCATCCTCAAACTGA+TGG | 0.641373 | 3_3:+62609564 | Msa0463270:CDS |
| CCATCTTCAACTAAAGATGG+TGG | 0.646507 | 3_3:+62608885 | Msa0463270:CDS |
| TCTGTTATACAATCTGTCGT+AGG | 0.648459 | 3_3:-62609486 | None:intergenic |
| ATGTATTTAAAGTTTCAAGG+TGG | 0.653263 | 3_3:-62611267 | None:intergenic |
| CATTTGATTACAATCCATGG+TGG | 0.665611 | 3_3:+62609845 | Msa0463270:CDS |
| TTTGGTTAGTGCAACTGGAG+TGG | 0.667170 | 3_3:-62609038 | None:intergenic |
| ATACATGAAATAATGTGACA+AGG | 0.675745 | 3_3:-62608751 | None:intergenic |
| GATTCCTTAAGATCTAAAGG+TGG | 0.677642 | 3_3:-62606627 | None:intergenic |
| TTCAAAACAGAGGAAAACAG+AGG | 0.677844 | 3_3:+62606513 | Msa0463270:five_prime_UTR |
| TATTACAAATCAAACCAGCA+AGG | 0.677933 | 3_3:+62609806 | Msa0463270:CDS |
| TCAACTACTTAGATTCATGG+TGG | 0.694803 | 3_3:+62606692 | Msa0463270:CDS |
| TATGGCTAAACTGAAAACGG+AGG | 0.698751 | 3_3:+62609659 | Msa0463270:CDS |
| TCGTCTGAAGATGAAACATG+GGG | 0.715707 | 3_3:+62609618 | Msa0463270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTAATCTAATCAA+AGG | - | chr3_3:62608552-62608571 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTATGAC+AGG | + | chr3_3:62610568-62610587 | Msa0463270:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTATGACA+GGG | + | chr3_3:62610569-62610588 | Msa0463270:intron | 10.0% |
| !!! | TATATATTTTTATGCTAATG+TGG | + | chr3_3:62606904-62606923 | Msa0463270:intron | 15.0% |
| !!! | ACAGTTAGTATATATTTTTA+AGG | + | chr3_3:62607056-62607075 | Msa0463270:intron | 15.0% |
| !!! | GAGTTAAATGTAAATTTTTT+TGG | + | chr3_3:62607113-62607132 | Msa0463270:intron | 15.0% |
| !! | GTTATGAAAAAAAATTATCT+TGG | - | chr3_3:62608175-62608194 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAGATAGATGAAA+TGG | - | chr3_3:62608319-62608338 | None:intergenic | 15.0% |
| !!! | AAAATGAGATGATTTTTATT+CGG | + | chr3_3:62608499-62608518 | Msa0463270:intron | 15.0% |
| !!! | ATTTTTTCATATTATTAGTC+AGG | - | chr3_3:62608691-62608710 | None:intergenic | 15.0% |
| !! | AGATGGTTAATAATATAAAA+TGG | + | chr3_3:62610317-62610336 | Msa0463270:intron | 15.0% |
| !!! | AATATCACTATTGTTTTAAA+AGG | - | chr3_3:62610438-62610457 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTATGACAG+GGG | + | chr3_3:62610570-62610589 | Msa0463270:intron | 15.0% |
| !!! | AAAATGATTTTGGTTTTCAA+TGG | - | chr3_3:62606409-62606428 | None:intergenic | 20.0% |
| !!! | AATGAGTAAGAAAATGATTT+TGG | - | chr3_3:62606419-62606438 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTCATTCTCAATT+TGG | - | chr3_3:62606553-62606572 | None:intergenic | 20.0% |
| !! | TTAGAGAATATTTCTTCTTT+GGG | - | chr3_3:62607508-62607527 | None:intergenic | 20.0% |
| !! | TTTAGAGAATATTTCTTCTT+TGG | - | chr3_3:62607509-62607528 | None:intergenic | 20.0% |
| !! | CAATAGTAGAAATAGATTAT+TGG | - | chr3_3:62607586-62607605 | None:intergenic | 20.0% |
| !! | AGATTTGGCAAATAAAAATA+GGG | - | chr3_3:62607647-62607666 | None:intergenic | 20.0% |
| !!! | TAGCCAAACATTTTATTATT+TGG | + | chr3_3:62607707-62607726 | Msa0463270:intron | 20.0% |
| !! | GTTCCAAATAATAAAATGTT+TGG | - | chr3_3:62607713-62607732 | None:intergenic | 20.0% |
| !! | TAATACTATAAACAAAGAAG+TGG | - | chr3_3:62607765-62607784 | None:intergenic | 20.0% |
| !!! | TTTTTATTGGTCAAAAACAA+TGG | - | chr3_3:62607895-62607914 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTCACTTTTTAT+TGG | - | chr3_3:62607908-62607927 | None:intergenic | 20.0% |
| !! | AATAAAAAGTGAGAAAAACA+AGG | + | chr3_3:62607907-62607926 | Msa0463270:intron | 20.0% |
| !! | TTTCATAACAAAAAACTAAG+AGG | + | chr3_3:62608186-62608205 | Msa0463270:intron | 20.0% |
| !! | GCAAAAATTTCAAAATTGTT+AGG | + | chr3_3:62608224-62608243 | Msa0463270:intron | 20.0% |
| !! | AAATTTCAAAATTGTTAGGT+CGG | + | chr3_3:62608228-62608247 | Msa0463270:intron | 20.0% |
| !!! | CTTTATTTCAATAAAACTCT+TGG | - | chr3_3:62608343-62608362 | None:intergenic | 20.0% |
| !!! | ATACACTTAGAATTTTCATT+GGG | - | chr3_3:62608446-62608465 | None:intergenic | 20.0% |
| !! | ATTCAATCACTTCTATTTAT+AGG | - | chr3_3:62609256-62609275 | None:intergenic | 20.0% |
| !!! | AGAAAAAATGATGATGAATA+TGG | - | chr3_3:62609420-62609439 | None:intergenic | 20.0% |
| !!! | AATTGTGTTTTTGGTATATT+TGG | + | chr3_3:62610204-62610223 | Msa0463270:intron | 20.0% |
| !! | AATTACGTTCATTAATTAGA+TGG | + | chr3_3:62610300-62610319 | Msa0463270:intron | 20.0% |
| !! | ATTTCTTGAATTAGAAATTC+AGG | - | chr3_3:62610665-62610684 | None:intergenic | 20.0% |
| !!! | TCTTTTAGTAAAGTGATTAA+AGG | - | chr3_3:62610755-62610774 | None:intergenic | 20.0% |
| !!! | ACATTTTGCAAAAATTCATT+TGG | + | chr3_3:62610942-62610961 | Msa0463270:intron | 20.0% |
| !!! | ACAATGTATTTAAAGTTTCA+AGG | - | chr3_3:62611273-62611292 | None:intergenic | 20.0% |
| ! | TTGGAAAAAAAAATGTAGTC+AGG | - | chr3_3:62606232-62606251 | None:intergenic | 25.0% |
| !! | GTTTTCTTTTTCTTTTCTAG+AGG | - | chr3_3:62606263-62606282 | None:intergenic | 25.0% |
| !! | TTAAGCTTTTTGACCAAAAA+AGG | + | chr3_3:62606585-62606604 | Msa0463270:CDS | 25.0% |
| !!! | CTTATTCACTTTACCTTTTT+TGG | - | chr3_3:62606601-62606620 | None:intergenic | 25.0% |
| ! | CAAAAAAGGTAAAGTGAATA+AGG | + | chr3_3:62606599-62606618 | Msa0463270:CDS | 25.0% |
| ! | AAAGATTCCTTAAGATCTAA+AGG | - | chr3_3:62606633-62606652 | None:intergenic | 25.0% |
| !! | TTCAAAACCTTTTCAATGAT+TGG | - | chr3_3:62606759-62606778 | None:intergenic | 25.0% |
| !!! | CATTGAAAAGGTTTTGAAAA+TGG | + | chr3_3:62606761-62606780 | Msa0463270:CDS | 25.0% |
| !!! | ACTCATTAACTTGTGTTTTA+AGG | - | chr3_3:62607097-62607116 | None:intergenic | 25.0% |
| ! | AATTGAATACGCAAGTATTA+AGG | + | chr3_3:62607384-62607403 | Msa0463270:intron | 25.0% |
| ! | ATTGAATACGCAAGTATTAA+GGG | + | chr3_3:62607385-62607404 | Msa0463270:intron | 25.0% |
| !!! | TAACGTGACCTATATTTTTA+TGG | + | chr3_3:62607442-62607461 | Msa0463270:intron | 25.0% |
| !!! | AACGTGACCTATATTTTTAT+GGG | + | chr3_3:62607443-62607462 | Msa0463270:intron | 25.0% |
| ! | ATCACTACCCATAAAAATAT+AGG | - | chr3_3:62607453-62607472 | None:intergenic | 25.0% |
| ! | TAGAGAATATTTCTTCTTTG+GGG | - | chr3_3:62607507-62607526 | None:intergenic | 25.0% |
| !!! | AAATGTTAATTTGTCCCTTA+AGG | - | chr3_3:62607624-62607643 | None:intergenic | 25.0% |
| ! | CAGATTTGGCAAATAAAAAT+AGG | - | chr3_3:62607648-62607667 | None:intergenic | 25.0% |
| !!! | AACCACTTTTTAACAACTTT+TGG | + | chr3_3:62607810-62607829 | Msa0463270:intron | 25.0% |
| !! | TACACTTAGAATTTTCATTG+GGG | - | chr3_3:62608445-62608464 | None:intergenic | 25.0% |
| !! | CATACACTTAGAATTTTCAT+TGG | - | chr3_3:62608447-62608466 | None:intergenic | 25.0% |
| ! | AAATTTATGTATCTCATTGC+AGG | + | chr3_3:62608707-62608726 | Msa0463270:intron | 25.0% |
| ! | TACATGAAATAATGTGACAA+GGG | - | chr3_3:62608753-62608772 | None:intergenic | 25.0% |
| ! | ATACATGAAATAATGTGACA+AGG | - | chr3_3:62608754-62608773 | None:intergenic | 25.0% |
| ! | TCACATTATTTCATGTATAC+AGG | + | chr3_3:62608756-62608775 | Msa0463270:CDS | 25.0% |
| !! | TAGTAAATTGATTTCCAGTA+AGG | - | chr3_3:62608794-62608813 | None:intergenic | 25.0% |
| ! | GAGTAATTGAACTTGATTTA+TGG | + | chr3_3:62608862-62608881 | Msa0463270:CDS | 25.0% |
| !! | GATTGTTTTCTTGAATCTTA+TGG | + | chr3_3:62608983-62609002 | Msa0463270:intron | 25.0% |
| !! | GACAAATGCATATTCTTTTA+TGG | - | chr3_3:62609074-62609093 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTATTCATGCAGA+TGG | + | chr3_3:62609431-62609450 | Msa0463270:intron | 25.0% |
| ! | CAGATGGCAAATAAAATATT+TGG | + | chr3_3:62609447-62609466 | Msa0463270:intron | 25.0% |
| !!! | TTTTCTGAAAAGTGAAATGA+TGG | - | chr3_3:62609713-62609732 | None:intergenic | 25.0% |
| ! | AAACATTTGATTACAATCCA+TGG | + | chr3_3:62609842-62609861 | Msa0463270:CDS | 25.0% |
| ! | AAAGATAGACTAAAAGTTGA+TGG | + | chr3_3:62609887-62609906 | Msa0463270:CDS | 25.0% |
| ! | AATCTTCATGTAAGTTTGAT+AGG | - | chr3_3:62609994-62610013 | None:intergenic | 25.0% |
| !! | CATACATAGTTATGTTTTTC+AGG | + | chr3_3:62610059-62610078 | Msa0463270:intron | 25.0% |
| ! | ATCCTAAGAATTTATCCTAA+AGG | + | chr3_3:62610097-62610116 | Msa0463270:CDS | 25.0% |
| !! | AATCATGGTTAATTAGGTTT+TGG | - | chr3_3:62610366-62610385 | None:intergenic | 25.0% |
| ! | CTTGAAAATCATGGTTAATT+AGG | - | chr3_3:62610372-62610391 | None:intergenic | 25.0% |
| !!! | GTTTTAAAAGGTTCTCTAAT+AGG | - | chr3_3:62610426-62610445 | None:intergenic | 25.0% |
| ! | AGGTTTAAAAGAAATGTATG+TGG | - | chr3_3:62610521-62610540 | None:intergenic | 25.0% |
| !! | TTAAACCTTGTTGTCATATT+AGG | + | chr3_3:62610533-62610552 | Msa0463270:intron | 25.0% |
| ! | TAATTCCTAATATGACAACA+AGG | - | chr3_3:62610541-62610560 | None:intergenic | 25.0% |
| ! | TCAAGAAATTGTACATAATG+AGG | + | chr3_3:62610676-62610695 | Msa0463270:CDS | 25.0% |
| !! | TATTTTTCATGTTCAACAAC+AGG | + | chr3_3:62610801-62610820 | Msa0463270:intron | 25.0% |
| !! | CAACAGGTAAAAGTATATAA+AGG | + | chr3_3:62610817-62610836 | Msa0463270:intron | 25.0% |
| !! | GTAAAAGTATATAAAGGAGT+TGG | + | chr3_3:62610823-62610842 | Msa0463270:CDS | 25.0% |
| !! | ATGAATTTTTGCAAAATGTG+TGG | - | chr3_3:62610941-62610960 | None:intergenic | 25.0% |
| ! | GAAGTGAAAGATAAAGATAA+GGG | + | chr3_3:62611121-62611140 | Msa0463270:CDS | 25.0% |
| !! | ATGTATTTAAAGTTTCAAGG+TGG | - | chr3_3:62611270-62611289 | None:intergenic | 25.0% |
| ! | ATTTAAAGATAATCTGCTGA+AGG | + | chr3_3:62611385-62611404 | Msa0463270:three_prime_UTR | 25.0% |
| !! | CTTTTTCTTTTCTAGAGGTT+AGG | - | chr3_3:62606258-62606277 | None:intergenic | 30.0% |
| TATATTTATGCATGAGATCG+AGG | - | chr3_3:62606326-62606345 | None:intergenic | 30.0% | |
| !! | TATGAAAGTGTTGTTCTATG+TGG | - | chr3_3:62606378-62606397 | None:intergenic | 30.0% |
| ACATAGAACAACACTTTCAT+AGG | + | chr3_3:62606377-62606396 | Msa0463270:five_prime_UTR | 30.0% | |
| TATAAACTCTCTTCCACAAA+AGG | + | chr3_3:62606469-62606488 | Msa0463270:five_prime_UTR | 30.0% | |
| ATAAACTCTCTTCCACAAAA+GGG | + | chr3_3:62606470-62606489 | Msa0463270:five_prime_UTR | 30.0% | |
| TATTTGCTCATTCAAAACAG+AGG | + | chr3_3:62606503-62606522 | Msa0463270:five_prime_UTR | 30.0% | |
| ! | TCTTTTTCCAAGTTTGCAAA+TGG | + | chr3_3:62606648-62606667 | Msa0463270:CDS | 30.0% |
| ! | ATTTTCACCATTTGCAAACT+TGG | - | chr3_3:62606658-62606677 | None:intergenic | 30.0% |
| TGGTGAAAATTACATGTCAA+AGG | + | chr3_3:62606668-62606687 | Msa0463270:CDS | 30.0% | |
| AGAACAAAATTGCACCTTAT+TGG | + | chr3_3:62606725-62606744 | Msa0463270:CDS | 30.0% | |
| AAATTGCACCTTATTGGATT+TGG | + | chr3_3:62606731-62606750 | Msa0463270:CDS | 30.0% | |
| AAAAAACCATTTGAGCAATG+TGG | + | chr3_3:62607023-62607042 | Msa0463270:intron | 30.0% | |
| ATATACTAACTGTAAAGTGC+AGG | - | chr3_3:62607049-62607068 | None:intergenic | 30.0% | |
| !!! | AGAATTTTTCAAGACACATC+TGG | + | chr3_3:62607167-62607186 | Msa0463270:intron | 30.0% |
| !! | ATTCATTAACTTGTGCCTTA+AGG | + | chr3_3:62607606-62607625 | Msa0463270:intron | 30.0% |
| !! | TTCATTAACTTGTGCCTTAA+GGG | + | chr3_3:62607607-62607626 | Msa0463270:intron | 30.0% |
| ACTAGAAACTCAACATTCAT+TGG | + | chr3_3:62607684-62607703 | Msa0463270:intron | 30.0% | |
| GTCCAAAAGTTGTTAAAAAG+TGG | - | chr3_3:62607815-62607834 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr3_3:62607882-62607901 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr3_3:62607933-62607952 | Msa0463270:intron | 30.0% | |
| !! | AAATTTTTGCCACTTGAACT+AGG | - | chr3_3:62608214-62608233 | None:intergenic | 30.0% |
| GTAAACTAACACATACAAAG+TGG | - | chr3_3:62608286-62608305 | None:intergenic | 30.0% | |
| ! | ACACTTAGAATTTTCATTGG+GGG | - | chr3_3:62608444-62608463 | None:intergenic | 30.0% |
| ! | AAATTGATTTCCAGTAAGGT+AGG | - | chr3_3:62608790-62608809 | None:intergenic | 30.0% |
| CAGTGATAAACCAATTATAG+AGG | + | chr3_3:62608821-62608840 | Msa0463270:CDS | 30.0% | |
| TGTTTCAAAGCCTCTATAAT+TGG | - | chr3_3:62608834-62608853 | None:intergenic | 30.0% | |
| !! | ATTATAGAGGCTTTGAAACA+AGG | + | chr3_3:62608834-62608853 | Msa0463270:CDS | 30.0% |
| ! | GGTGCATTATATTTTTCTAG+TGG | - | chr3_3:62608951-62608970 | None:intergenic | 30.0% |
| AATATAATGCACCATAGAGT+TGG | + | chr3_3:62608958-62608977 | Msa0463270:intron | 30.0% | |
| AAAACAATCATCCAACTCTA+TGG | - | chr3_3:62608972-62608991 | None:intergenic | 30.0% | |
| TTACTTCTTGAAATCAATGC+AGG | + | chr3_3:62609008-62609027 | Msa0463270:intron | 30.0% | |
| ! | TTTTATGGCTTCCAAACATT+TGG | - | chr3_3:62609059-62609078 | None:intergenic | 30.0% |
| !! | TCTTCTAAAGTTAGAATCAC+TGG | - | chr3_3:62609109-62609128 | None:intergenic | 30.0% |
| TTGAAGATATGCATATTGTC+CGG | - | chr3_3:62609314-62609333 | None:intergenic | 30.0% | |
| TTATCTAACTAGATAGGAGA+TGG | - | chr3_3:62609365-62609384 | None:intergenic | 30.0% | |
| CAATGCTTATCTAACTAGAT+AGG | - | chr3_3:62609371-62609390 | None:intergenic | 30.0% | |
| GGAATAGCAAAATAGTCATA+AGG | - | chr3_3:62609399-62609418 | None:intergenic | 30.0% | |
| ACCAGCATCACTAAAAAATA+TGG | + | chr3_3:62609518-62609537 | Msa0463270:CDS | 30.0% | |
| !!! | ACCATATTTTTTAGTGATGC+TGG | - | chr3_3:62609522-62609541 | None:intergenic | 30.0% |
| TATATCAACTAAACCACCAA+AGG | + | chr3_3:62609545-62609564 | Msa0463270:CDS | 30.0% | |
| TTCTATGGCTAAACTGAAAA+CGG | + | chr3_3:62609656-62609675 | Msa0463270:CDS | 30.0% | |
| AATCTGAATCATCTGTTCTA+TGG | + | chr3_3:62609741-62609760 | Msa0463270:intron | 30.0% | |
| TATTACAAATCAAACCAGCA+AGG | + | chr3_3:62609806-62609825 | Msa0463270:CDS | 30.0% | |
| AGTTTGATAGGTACCTAATT+AGG | - | chr3_3:62609982-62610001 | None:intergenic | 30.0% | |
| GCTGAATTAAACCTATCATA+TGG | + | chr3_3:62610031-62610050 | Msa0463270:intron | 30.0% | |
| !! | CTCCTTTAGGATAAATTCTT+AGG | - | chr3_3:62610102-62610121 | None:intergenic | 30.0% |
| ! | GTGTTCAATCCACAAATTTT+AGG | + | chr3_3:62610125-62610144 | Msa0463270:CDS | 30.0% |
| TAAATGTGGCCTAAAATTTG+TGG | - | chr3_3:62610137-62610156 | None:intergenic | 30.0% | |
| ! | ACAAATTTTAGGCCACATTT+AGG | + | chr3_3:62610136-62610155 | Msa0463270:CDS | 30.0% |
| ! | CAAATTTTAGGCCACATTTA+GGG | + | chr3_3:62610137-62610156 | Msa0463270:CDS | 30.0% |
| CATAACGCAATTCAAATACA+TGG | + | chr3_3:62610275-62610294 | Msa0463270:intron | 30.0% | |
| !! | TAACCATGATTTTCAAGCAT+TGG | + | chr3_3:62610375-62610394 | Msa0463270:intron | 30.0% |
| ! | ACTTTTAATATCTGCTTCAC+TGG | - | chr3_3:62610725-62610744 | None:intergenic | 30.0% |
| ! | AAGTATATAAAGGAGTTGGT+TGG | + | chr3_3:62610827-62610846 | Msa0463270:CDS | 30.0% |
| GAAGAAAACAAGTGTAAAGA+TGG | + | chr3_3:62611024-62611043 | Msa0463270:CDS | 30.0% | |
| CGAAGTGAAAGATAAAGATA+AGG | + | chr3_3:62611120-62611139 | Msa0463270:CDS | 30.0% | |
| ! | TGTGACACGTTCATTTATTT+TGG | + | chr3_3:62611339-62611358 | Msa0463270:three_prime_UTR | 30.0% |
| !!! | TATTTTGGTAGTCTGATCAA+TGG | + | chr3_3:62611354-62611373 | Msa0463270:three_prime_UTR | 30.0% |
| !! | TTTTCTAGAGGTTAGGTGAT+TGG | - | chr3_3:62606251-62606270 | None:intergenic | 35.0% |
| ! | TAATTTCTCACACCCTTTTG+TGG | - | chr3_3:62606485-62606504 | None:intergenic | 35.0% |
| TTCAAAACAGAGGAAAACAG+AGG | + | chr3_3:62606513-62606532 | Msa0463270:five_prime_UTR | 35.0% | |
| AGAACCACCTTTAGATCTTA+AGG | + | chr3_3:62606623-62606642 | Msa0463270:CDS | 35.0% | |
| GATTCCTTAAGATCTAAAGG+TGG | - | chr3_3:62606630-62606649 | None:intergenic | 35.0% | |
| GGATCAACTACTTAGATTCA+TGG | + | chr3_3:62606689-62606708 | Msa0463270:CDS | 35.0% | |
| TCAACTACTTAGATTCATGG+TGG | + | chr3_3:62606692-62606711 | Msa0463270:CDS | 35.0% | |
| ! | TTTGGAGCCAATCATTGAAA+AGG | + | chr3_3:62606749-62606768 | Msa0463270:CDS | 35.0% |
| CTGCTTCTAGATGATTTCAA+TGG | + | chr3_3:62606846-62606865 | Msa0463270:CDS | 35.0% | |
| TGATTTCAATGGTCCCTTAA+AGG | + | chr3_3:62606857-62606876 | Msa0463270:CDS | 35.0% | |
| TGTGGCTAAAAAATAGGAAG+TGG | - | chr3_3:62607220-62607239 | None:intergenic | 35.0% | |
| GGCAAATAGTGCATTGTAAT+TGG | + | chr3_3:62607254-62607273 | Msa0463270:intron | 35.0% | |
| ! | TAGTGATAACTTGTGCTCTT+AGG | + | chr3_3:62607466-62607485 | Msa0463270:intron | 35.0% |
| AAGTGCAACACAATCAGATT+TGG | - | chr3_3:62607662-62607681 | None:intergenic | 35.0% | |
| AACTAACACATACAAAGTGG+AGG | - | chr3_3:62608283-62608302 | None:intergenic | 35.0% | |
| TTCGGTACATAAGTTCTCAA+TGG | + | chr3_3:62608517-62608536 | Msa0463270:intron | 35.0% | |
| ATTGCAGGTACATCATGATA+TGG | + | chr3_3:62608722-62608741 | Msa0463270:intron | 35.0% | |
| GGTGGTATTAAAGTAGTTCA+TGG | + | chr3_3:62608903-62608922 | Msa0463270:CDS | 35.0% | |
| AAACATTTGGTTAGTGCAAC+TGG | - | chr3_3:62609046-62609065 | None:intergenic | 35.0% | |
| AGTTGCACTAACCAAATGTT+TGG | + | chr3_3:62609045-62609064 | Msa0463270:CDS | 35.0% | |
| !!! | TATCCTGAAGTTTTGGTGTT+AGG | - | chr3_3:62609135-62609154 | None:intergenic | 35.0% |
| ! | GCAAAGTTATCCTGAAGTTT+TGG | - | chr3_3:62609142-62609161 | None:intergenic | 35.0% |
| TCTGTTATACAATCTGTCGT+AGG | - | chr3_3:62609489-62609508 | None:intergenic | 35.0% | |
| !!! | TTTTTTAGTGATGCTGGTGA+GGG | - | chr3_3:62609516-62609535 | None:intergenic | 35.0% |
| !!! | ATTTTTTAGTGATGCTGGTG+AGG | - | chr3_3:62609517-62609536 | None:intergenic | 35.0% |
| TCCATTTGACACATGATTGT+TGG | - | chr3_3:62609592-62609611 | None:intergenic | 35.0% | |
| AATCGTCTGAAGATGAAACA+TGG | + | chr3_3:62609616-62609635 | Msa0463270:CDS | 35.0% | |
| ATCGTCTGAAGATGAAACAT+GGG | + | chr3_3:62609617-62609636 | Msa0463270:CDS | 35.0% | |
| ACAGGAACAACAAGATTCTA+TGG | + | chr3_3:62609641-62609660 | Msa0463270:CDS | 35.0% | |
| GTTCTATGGCAGAAAGTAAA+TGG | + | chr3_3:62609755-62609774 | Msa0463270:intron | 35.0% | |
| GAAAGTAAATGGTGAAGAGA+TGG | + | chr3_3:62609766-62609785 | Msa0463270:intron | 35.0% | |
| CATTTGATTACAATCCATGG+TGG | + | chr3_3:62609845-62609864 | Msa0463270:CDS | 35.0% | |
| !! | GATAGACTAAAAGTTGATGG+TGG | + | chr3_3:62609890-62609909 | Msa0463270:CDS | 35.0% |
| !! | TTGATGGTGGTAAAGTTAGA+AGG | + | chr3_3:62609903-62609922 | Msa0463270:CDS | 35.0% |
| TGATAGGTACCTAATTAGGT+CGG | - | chr3_3:62609978-62609997 | None:intergenic | 35.0% | |
| TGTATGTCAAGCCATATGAT+AGG | - | chr3_3:62610045-62610064 | None:intergenic | 35.0% | |
| ! | GCAGGTTAGAATTGTGTTTT+TGG | + | chr3_3:62610195-62610214 | Msa0463270:intron | 35.0% |
| !! | CATGGTTAATTAGGTTTTGG+TGG | - | chr3_3:62610363-62610382 | None:intergenic | 35.0% |
| ATGCCAATGCTTGAAAATCA+TGG | - | chr3_3:62610381-62610400 | None:intergenic | 35.0% | |
| TAAAAGGTTCTCTAATAGGC+TGG | - | chr3_3:62610422-62610441 | None:intergenic | 35.0% | |
| CATAAGAAACCATAATGTCG+TGG | + | chr3_3:62610486-62610505 | Msa0463270:intron | 35.0% | |
| AGAAATGTATGTGGTCACAA+TGG | - | chr3_3:62610512-62610531 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTATGACAGGGGCA+TGG | + | chr3_3:62610575-62610594 | Msa0463270:intron | 35.0% |
| ! | AGGCTTTTGATCCTAAAAGA+AGG | + | chr3_3:62610696-62610715 | Msa0463270:CDS | 35.0% |
| ! | TTCACTGGAAACCTTCTTTT+AGG | - | chr3_3:62610710-62610729 | None:intergenic | 35.0% |
| CTAACCTTTGTGTAAAAGTC+TGG | - | chr3_3:62610895-62610914 | None:intergenic | 35.0% | |
| TTTACACAAAGGTTAGTACC+CGG | + | chr3_3:62610899-62610918 | Msa0463270:intron | 35.0% | |
| TGGAGAAGAACTATACAAAC+CGG | - | chr3_3:62610921-62610940 | None:intergenic | 35.0% | |
| CAAGTGTAAAGATGGACAAT+TGG | + | chr3_3:62611032-62611051 | Msa0463270:CDS | 35.0% | |
| TGGACAATTGGTATCCTATT+TGG | + | chr3_3:62611044-62611063 | Msa0463270:CDS | 35.0% | |
| GGACAATTGGTATCCTATTT+GGG | + | chr3_3:62611045-62611064 | Msa0463270:CDS | 35.0% | |
| CTTTATCTTTCACTTCGATC+CGG | - | chr3_3:62611117-62611136 | None:intergenic | 35.0% | |
| ! | AACTCTGTCAAGCTTTTACT+TGG | + | chr3_3:62611241-62611260 | Msa0463270:CDS | 35.0% |
| ACACATTTAATGCGTGAATC+CGG | - | chr3_3:62611322-62611341 | None:intergenic | 35.0% | |
| ! | ATCTGCTGAAGGTATAATGT+TGG | + | chr3_3:62611396-62611415 | Msa0463270:three_prime_UTR | 35.0% |
| ! | GATTGGCTCCAAATCCAATA+AGG | - | chr3_3:62606742-62606761 | None:intergenic | 40.0% |
| AATGAAACTCGCAGTATTGC+AGG | + | chr3_3:62606795-62606814 | Msa0463270:CDS | 40.0% | |
| GTGCATACCTCATCCTTTAA+GGG | - | chr3_3:62606873-62606892 | None:intergenic | 40.0% | |
| AGTGCATACCTCATCCTTTA+AGG | - | chr3_3:62606874-62606893 | None:intergenic | 40.0% | |
| ! | AGGAGGTGTGGCTAAAAAAT+AGG | - | chr3_3:62607226-62607245 | None:intergenic | 40.0% |
| CTATTTGCCACAATTCAAGG+AGG | - | chr3_3:62607243-62607262 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr3_3:62607246-62607265 | None:intergenic | 40.0% | |
| ACAAATCTCACACTTTGGTG+GGG | - | chr3_3:62608007-62608026 | None:intergenic | 40.0% | |
| CACAAATCTCACACTTTGGT+GGG | - | chr3_3:62608008-62608027 | None:intergenic | 40.0% | |
| TCACAAATCTCACACTTTGG+TGG | - | chr3_3:62608009-62608028 | None:intergenic | 40.0% | |
| CACTCACAAATCTCACACTT+TGG | - | chr3_3:62608012-62608031 | None:intergenic | 40.0% | |
| CAAAGTGTGAGATTTGTGAG+TGG | + | chr3_3:62608010-62608029 | Msa0463270:intron | 40.0% | |
| GTGTGGGGTACATAGAAAAT+TGG | - | chr3_3:62608055-62608074 | None:intergenic | 40.0% | |
| ATTCTCCGTATAGAAACCGT+GGG | - | chr3_3:62608080-62608099 | None:intergenic | 40.0% | |
| TATTCTCCGTATAGAAACCG+TGG | - | chr3_3:62608081-62608100 | None:intergenic | 40.0% | |
| TAAGAGGTTCCTAGTTCAAG+TGG | + | chr3_3:62608202-62608221 | Msa0463270:intron | 40.0% | |
| !! | ACATACAAAGTGGAGGTGTT+GGG | - | chr3_3:62608276-62608295 | None:intergenic | 40.0% |
| GGTACATAAGTTCTCAATGG+AGG | + | chr3_3:62608520-62608539 | Msa0463270:intron | 40.0% | |
| TGGCCATCTTCAACTAAAGA+TGG | + | chr3_3:62608882-62608901 | Msa0463270:CDS | 40.0% | |
| CCACCATCTTTAGTTGAAGA+TGG | - | chr3_3:62608888-62608907 | None:intergenic | 40.0% | |
| CCATCTTCAACTAAAGATGG+TGG | + | chr3_3:62608885-62608904 | Msa0463270:CDS | 40.0% | |
| CGTCATGTATCAGTGCTTAT+AGG | - | chr3_3:62609201-62609220 | None:intergenic | 40.0% | |
| ! | CTATGTGATAGTGATGTGTC+CGG | - | chr3_3:62609230-62609249 | None:intergenic | 40.0% |
| GCCAACAATCATGTGTCAAA+TGG | + | chr3_3:62609588-62609607 | Msa0463270:CDS | 40.0% | |
| TCGTCTGAAGATGAAACATG+GGG | + | chr3_3:62609618-62609637 | Msa0463270:CDS | 40.0% | |
| TATGGCTAAACTGAAAACGG+AGG | + | chr3_3:62609659-62609678 | Msa0463270:CDS | 40.0% | |
| TAAACTGAAAACGGAGGACA+TGG | + | chr3_3:62609665-62609684 | Msa0463270:CDS | 40.0% | |
| ! | ATCCATGGTGGAAAATCAGA+AGG | + | chr3_3:62609857-62609876 | Msa0463270:CDS | 40.0% |
| ! | TACCTTCTGATTTTCCACCA+TGG | - | chr3_3:62609862-62609881 | None:intergenic | 40.0% |
| AAATCTGCTTCTGAGTCTCA+TGG | + | chr3_3:62609950-62609969 | Msa0463270:CDS | 40.0% | |
| GATTGAACACGTTCTCCTTT+AGG | - | chr3_3:62610115-62610134 | None:intergenic | 40.0% | |
| ! | ATTTTAGGCCACATTTAGGG+TGG | + | chr3_3:62610140-62610159 | Msa0463270:CDS | 40.0% |
| GATGGTTGCATTCAATATGC+AGG | + | chr3_3:62610177-62610196 | Msa0463270:CDS | 40.0% | |
| !! | TCAAGCATTGGCATATTGCA+TGG | + | chr3_3:62610387-62610406 | Msa0463270:intron | 40.0% |
| ! | TCCACCAGACTTTTACACAA+AGG | + | chr3_3:62610888-62610907 | Msa0463270:CDS | 40.0% |
| ACCTTTGTGTAAAAGTCTGG+TGG | - | chr3_3:62610892-62610911 | None:intergenic | 40.0% | |
| GGAGAAGAACTATACAAACC+GGG | - | chr3_3:62610920-62610939 | None:intergenic | 40.0% | |
| GATCAATCTGATTGTGTGAC+AGG | + | chr3_3:62610967-62610986 | Msa0463270:intron | 40.0% | |
| ! | AAGGGATCAGATGATTTTGC+TGG | + | chr3_3:62611139-62611158 | Msa0463270:CDS | 40.0% |
| CAGAGCTAAGACATGGATTT+CGG | + | chr3_3:62611182-62611201 | Msa0463270:CDS | 40.0% | |
| !! | TGTAGCTTTGTGTGACAGAA+AGG | + | chr3_3:62611207-62611226 | Msa0463270:CDS | 40.0% |
| !! | GTAGCTTTGTGTGACAGAAA+GGG | + | chr3_3:62611208-62611227 | Msa0463270:CDS | 40.0% |
| AGACGTCGTTCATCCAAATA+TGG | + | chr3_3:62611293-62611312 | Msa0463270:exon | 40.0% | |
| GACGTCGTTCATCCAAATAT+GGG | + | chr3_3:62611294-62611313 | Msa0463270:exon | 40.0% | |
| GTTCATCCAAATATGGGAAC+CGG | + | chr3_3:62611300-62611319 | Msa0463270:three_prime_UTR | 40.0% | |
| CAGTATTGCAGGACTCAGTT+TGG | + | chr3_3:62606806-62606825 | Msa0463270:CDS | 45.0% | |
| CAATGGTCCCTTAAAGGATG+AGG | + | chr3_3:62606863-62606882 | Msa0463270:CDS | 45.0% | |
| TTCTCCGTATAGAAACCGTG+GGG | - | chr3_3:62608079-62608098 | None:intergenic | 45.0% | |
| ACGGAGAATAGTCTCTATCG+CGG | + | chr3_3:62608091-62608110 | Msa0463270:intron | 45.0% | |
| !! | AGGTGTTGGGATTTGAATCC+CGG | - | chr3_3:62608263-62608282 | None:intergenic | 45.0% |
| ! | CACATACAAAGTGGAGGTGT+TGG | - | chr3_3:62608277-62608296 | None:intergenic | 45.0% |
| GGACACAATTCCTACCTTAC+TGG | + | chr3_3:62608777-62608796 | Msa0463270:CDS | 45.0% | |
| TTTGGTTAGTGCAACTGGAG+TGG | - | chr3_3:62609041-62609060 | None:intergenic | 45.0% | |
| !!! | CCTGAAGTTTTGGTGTTAGG+TGG | - | chr3_3:62609132-62609151 | None:intergenic | 45.0% |
| CCACCTAACACCAAAACTTC+AGG | + | chr3_3:62609129-62609148 | Msa0463270:CDS | 45.0% | |
| TTTCAGACACCATCATGTGC+CGG | + | chr3_3:62609292-62609311 | Msa0463270:intron | 45.0% | |
| TCAGTTTGAGGATGCTCCTT+TGG | - | chr3_3:62609564-62609583 | None:intergenic | 45.0% | |
| !! | AAGGAGCATCCTCAAACTGA+TGG | + | chr3_3:62609564-62609583 | Msa0463270:CDS | 45.0% |
| TTGTTGGCACCATCAGTTTG+AGG | - | chr3_3:62609576-62609595 | None:intergenic | 45.0% | |
| TGAAGATGAAACATGGGGAC+AGG | + | chr3_3:62609623-62609642 | Msa0463270:CDS | 45.0% | |
| TGAAAACGGAGGACATGGTA+AGG | + | chr3_3:62609670-62609689 | Msa0463270:intron | 45.0% | |
| CCATACATCCACCCTAAATG+TGG | - | chr3_3:62610151-62610170 | None:intergenic | 45.0% | |
| ! | CCACATTTAGGGTGGATGTA+TGG | + | chr3_3:62610148-62610167 | Msa0463270:CDS | 45.0% |
| TCACAATGGCCACGACATTA+TGG | - | chr3_3:62610498-62610517 | None:intergenic | 45.0% | |
| ! | AAATCACTCCGGTTGATGCA+AGG | + | chr3_3:62610599-62610618 | Msa0463270:CDS | 45.0% |
| ! | AATCACTCCGGTTGATGCAA+GGG | + | chr3_3:62610600-62610619 | Msa0463270:CDS | 45.0% |
| TGAACATCCCTTGCATCAAC+CGG | - | chr3_3:62610610-62610629 | None:intergenic | 45.0% | |
| CAAGGGATGTTCAAAGCGAA+TGG | + | chr3_3:62610617-62610636 | Msa0463270:CDS | 45.0% | |
| GGATGTTCAAAGCGAATGGA+GGG | + | chr3_3:62610621-62610640 | Msa0463270:CDS | 45.0% | |
| GTGTGACAGGTTTGTATTGC+TGG | + | chr3_3:62610980-62610999 | Msa0463270:intron | 45.0% | |
| ACAGGTTTGTATTGCTGGAG+TGG | + | chr3_3:62610985-62611004 | Msa0463270:intron | 45.0% | |
| CAGGTTTGTATTGCTGGAGT+GGG | + | chr3_3:62610986-62611005 | Msa0463270:intron | 45.0% | |
| TCGAACTCTTCGTCCCAAAT+AGG | - | chr3_3:62611061-62611080 | None:intergenic | 45.0% | |
| !! | CCATGTCTTAGCTCTGATAC+AGG | - | chr3_3:62611178-62611197 | None:intergenic | 45.0% |
| CCTGTATCAGAGCTAAGACA+TGG | + | chr3_3:62611175-62611194 | Msa0463270:CDS | 45.0% | |
| GTGAATCCGGTTCCCATATT+TGG | - | chr3_3:62611309-62611328 | None:intergenic | 45.0% | |
| TGCAGGCCACATTGCTCAAA+TGG | - | chr3_3:62607032-62607051 | None:intergenic | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | chr3_3:62607233-62607252 | Msa0463270:intron | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr3_3:62607238-62607257 | None:intergenic | 50.0% | |
| GAGAATAGTCTCTATCGCGG+TGG | + | chr3_3:62608094-62608113 | Msa0463270:intron | 50.0% | |
| GTTAGGTCGGACGTTATGAC+CGG | + | chr3_3:62608241-62608260 | Msa0463270:intron | 50.0% | |
| TTAGGTCGGACGTTATGACC+GGG | + | chr3_3:62608242-62608261 | Msa0463270:intron | 50.0% | |
| CTGATACATGACGCAGACAC+CGG | + | chr3_3:62609208-62609227 | Msa0463270:intron | 50.0% | |
| GCATATTGTCCGGCACATGA+TGG | - | chr3_3:62609304-62609323 | None:intergenic | 50.0% | |
| GTTTGAGGATGCTCCTTTGG+TGG | - | chr3_3:62609561-62609580 | None:intergenic | 50.0% | |
| CGGAGGACATGGTAAGGAAT+AGG | + | chr3_3:62609676-62609695 | Msa0463270:intron | 50.0% | |
| TGTATTCACGTGCACCTTGC+TGG | - | chr3_3:62609823-62609842 | None:intergenic | 50.0% | |
| CTCATGGAGCCGACCTAATT+AGG | + | chr3_3:62609966-62609985 | Msa0463270:CDS | 50.0% | |
| GTGGATGTATGGAGCTCAGA+TGG | + | chr3_3:62610159-62610178 | Msa0463270:CDS | 50.0% | |
| GGGATGTTCAAAGCGAATGG+AGG | + | chr3_3:62610620-62610639 | Msa0463270:CDS | 50.0% | |
| TTCAAAGCGAATGGAGGGTG+CGG | + | chr3_3:62610626-62610645 | Msa0463270:CDS | 50.0% | |
| !! | CGAGCTCTGGAACAGTCAAT+TGG | - | chr3_3:62611087-62611106 | None:intergenic | 50.0% |
| TCACACTTTGGTGGGGTACG+TGG | - | chr3_3:62608000-62608019 | None:intergenic | 55.0% | |
| ATAGAAACCGTGGGGCGTGT+GGG | - | chr3_3:62608071-62608090 | None:intergenic | 55.0% | |
| TATAGAAACCGTGGGGCGTG+TGG | - | chr3_3:62608072-62608091 | None:intergenic | 55.0% | |
| CACGCCCCACGGTTTCTATA+CGG | + | chr3_3:62608072-62608091 | Msa0463270:intron | 55.0% | |
| ! | AGGGGCATGGCAAATCACTC+CGG | + | chr3_3:62610588-62610607 | Msa0463270:intron | 55.0% |
| TATGTACCCCACACGCCCCA+CGG | + | chr3_3:62608061-62608080 | Msa0463270:intron | 60.0% | |
| TAGAAACCGTGGGGCGTGTG+GGG | - | chr3_3:62608070-62608089 | None:intergenic | 60.0% | |
| TTCCAGAGCTCGCGTTGCTC+CGG | + | chr3_3:62611095-62611114 | Msa0463270:CDS | 60.0% | |
| ATCCGGAGCAACGCGAGCTC+TGG | - | chr3_3:62611100-62611119 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 62606228 | 62611428 | 62606228 | ID=Msa0463270;Name=Msa0463270 |
| chr3_3 | mRNA | 62606228 | 62611428 | 62606228 | ID=Msa0463270-mRNA-1;Parent=Msa0463270;Name=Msa0463270-mRNA-1;_AED=0.08;_eAED=0.08;_QI=333|1|1|1|1|1|9|134|593 |
| chr3_3 | exon | 62606228 | 62606884 | 62606228 | ID=Msa0463270-mRNA-1:exon:13434;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62608729 | 62608928 | 62608729 | ID=Msa0463270-mRNA-1:exon:13435;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62609030 | 62609165 | 62609030 | ID=Msa0463270-mRNA-1:exon:13436;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62609450 | 62609686 | 62609450 | ID=Msa0463270-mRNA-1:exon:13437;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62609767 | 62609987 | 62609767 | ID=Msa0463270-mRNA-1:exon:13438;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62610081 | 62610198 | 62610081 | ID=Msa0463270-mRNA-1:exon:13439;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62610590 | 62610742 | 62610590 | ID=Msa0463270-mRNA-1:exon:13440;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62610823 | 62610909 | 62610823 | ID=Msa0463270-mRNA-1:exon:13441;Parent=Msa0463270-mRNA-1 |
| chr3_3 | exon | 62610989 | 62611428 | 62610989 | ID=Msa0463270-mRNA-1:exon:13442;Parent=Msa0463270-mRNA-1 |
| chr3_3 | five_prime_UTR | 62606228 | 62606560 | 62606228 | ID=Msa0463270-mRNA-1:five_prime_utr;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62606561 | 62606884 | 62606561 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62608729 | 62608928 | 62608729 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62609030 | 62609165 | 62609030 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62609450 | 62609686 | 62609450 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62609767 | 62609987 | 62609767 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62610081 | 62610198 | 62610081 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62610590 | 62610742 | 62610590 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62610823 | 62610909 | 62610823 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | CDS | 62610989 | 62611294 | 62610989 | ID=Msa0463270-mRNA-1:cds;Parent=Msa0463270-mRNA-1 |
| chr3_3 | three_prime_UTR | 62611295 | 62611428 | 62611295 | ID=Msa0463270-mRNA-1:three_prime_utr;Parent=Msa0463270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
