Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421850 | sp|Q9SZX3|ASSY_ARATH | 75.658 | 456 | 97 | 3 | 36 | 477 | 37 | 492 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421850 | G7J524 | 97.495 | 479 | 10 | 1 | 1 | 479 | 1 | 477 | 0.0 | 961 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657710 | Msa1421850 | 0.806722 | 7.166944e-50 | -8.615850e-47 |
| Msa0828960 | Msa1421850 | 0.801461 | 8.907231e-49 | -8.615850e-47 |
| Msa0146930 | Msa1421850 | 0.806604 | 7.589792e-50 | -8.615850e-47 |
| Msa0235290 | Msa1421850 | 0.811702 | 6.135708e-51 | -8.615850e-47 |
| Msa0418450 | Msa1421850 | 0.987047 | 7.213679e-169 | -8.615850e-47 |
| Msa0465820 | Msa1421850 | 0.938481 | 6.262462e-99 | -8.615850e-47 |
| Msa0284800 | Msa1421850 | 0.809866 | 1.531212e-50 | -8.615850e-47 |
| Msa0330520 | Msa1421850 | 0.802768 | 4.796007e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421850 | MtrunA17_Chr3g0116191 | 97.495 | 479 | 10 | 1 | 1 | 479 | 1 | 477 | 0.0 | 961 |
| Msa1421850 | MtrunA17_Chr5g0418151 | 78.423 | 482 | 99 | 4 | 1 | 479 | 1 | 480 | 0.0 | 800 |
| Msa1421850 | MtrunA17_Chr4g0057681 | 77.547 | 481 | 103 | 3 | 1 | 479 | 1 | 478 | 0.0 | 792 |
| Msa1421850 | MtrunA17_Chr3g0116211 | 92.105 | 38 | 3 | 0 | 228 | 265 | 5 | 42 | 3.25e-20 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1421850 | AT4G24830.1 | 75.658 | 456 | 97 | 3 | 36 | 477 | 37 | 492 | 0.0 | 736 |
| Msa1421850 | AT4G24830.2 | 68.421 | 456 | 86 | 4 | 36 | 477 | 37 | 448 | 0.0 | 643 |
Find 133 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGGGTTTATAAAGCTTTA+TGG | 0.195100 | tig0025315:-20308 | Msa1421850:CDS |
| GAGACTTTCTCCAGGAAATT+TGG | 0.219965 | tig0025315:-20744 | Msa1421850:CDS |
| CATTTAAATGTTGCTTTGTT+TGG | 0.232185 | tig0025315:-20249 | Msa1421850:exon |
| GGCTCGTTTGGAGCATCCTC+TGG | 0.264292 | tig0025315:+21123 | None:intergenic |
| GCAGCACCAAAACTTCTTCT+TGG | 0.269528 | tig0025315:+23358 | None:intergenic |
| CTCTTCCCGTTCACTGATAC+TGG | 0.283687 | tig0025315:+20764 | None:intergenic |
| TAAATTGAATAAGGTTGTTC+TGG | 0.285220 | tig0025315:-23024 | Msa1421850:CDS |
| TCCAGCAAATGAACCTAAAA+AGG | 0.289546 | tig0025315:-21169 | Msa1421850:CDS |
| AATTGTACCTTTGCAATTAC+AGG | 0.294100 | tig0025315:+22484 | None:intergenic |
| TATAATACCTCTTGCATGTT+TGG | 0.299208 | tig0025315:+23772 | None:intergenic |
| AAGAAGGTTGCTGGACTAAA+AGG | 0.307828 | tig0025315:-23047 | Msa1421850:CDS |
| GTTCCTGTCCCTACTATATA+TGG | 0.308253 | tig0025315:+21392 | None:intergenic |
| TCCAAACAACCATAATAAAA+AGG | 0.314770 | tig0025315:-23894 | Msa1421850:five_prime_UTR |
| AGAGTCCTTATAGTTTATAT+AGG | 0.334609 | tig0025315:-20382 | Msa1421850:CDS |
| CATGCTTACTCTGGCTCGTT+TGG | 0.336131 | tig0025315:+21111 | None:intergenic |
| AGCTCAGCAACCAAATTTCC+TGG | 0.338037 | tig0025315:+20734 | None:intergenic |
| GACAATGAAGGGTGATGTTT+TGG | 0.341023 | tig0025315:-21196 | Msa1421850:intron |
| CTTGTTCTTGACAATGTTTG+TGG | 0.349316 | tig0025315:-20204 | Msa1421850:three_prime_UTR |
| TCTTCCCTATATAAACTATA+AGG | 0.355120 | tig0025315:+20377 | None:intergenic |
| ATTTGAAGGAGGAATTTGTT+AGG | 0.362363 | tig0025315:-22582 | Msa1421850:CDS |
| TGGAGGGAGTGGGATATTAC+AGG | 0.373658 | tig0025315:-21477 | Msa1421850:CDS |
| GTAGGAGCAATAGCAATAAC+TGG | 0.378943 | tig0025315:+23794 | None:intergenic |
| GTTTGCTTCACAGCTGATCT+AGG | 0.379181 | tig0025315:-22841 | Msa1421850:CDS |
| TCTGAGACCAAGAAGGTTGC+TGG | 0.380668 | tig0025315:-23056 | Msa1421850:CDS |
| ACTAAAAGGTAAATTGAATA+AGG | 0.382723 | tig0025315:-23033 | Msa1421850:CDS |
| GTGAGTTTGAAACTGTATAA+AGG | 0.393785 | tig0025315:-20428 | Msa1421850:CDS |
| TTGAGTCCAAGAAGAAGTTT+TGG | 0.398524 | tig0025315:-23364 | Msa1421850:CDS |
| GAGTCCTTATAGTTTATATA+GGG | 0.398664 | tig0025315:-20381 | Msa1421850:CDS |
| GGCACCTCTTTGAATGATAA+AGG | 0.401550 | tig0025315:+23546 | None:intergenic |
| CGAATCGATGGATTCATTCA+TGG | 0.403729 | tig0025315:-20480 | Msa1421850:CDS |
| TTATATTTCAGAGAGAACTA+TGG | 0.433222 | tig0025315:-22874 | Msa1421850:intron |
| CTTCACTGCAGCAAGAGACT+TGG | 0.434941 | tig0025315:-20603 | Msa1421850:CDS |
| GTTGCTGAGCTGAATGAGAT+AGG | 0.447227 | tig0025315:-20722 | Msa1421850:CDS |
| TGGAGCCACAACATTTAACT+TGG | 0.448067 | tig0025315:+21500 | None:intergenic |
| AAGGCGTTGCCTGGCAGAAC+CGG | 0.451413 | tig0025315:+23565 | None:intergenic |
| GCTGTCTCCCATGGTTGTAC+AGG | 0.452794 | tig0025315:-21661 | Msa1421850:CDS |
| GTAGAGATTGGATTTGAGTC+AGG | 0.455723 | tig0025315:-20791 | Msa1421850:CDS |
| TTGGTTGAAGACCGTATTGT+AGG | 0.457847 | tig0025315:-20671 | Msa1421850:CDS |
| AAGATCTCACAGACTACAAC+AGG | 0.459666 | tig0025315:-20455 | Msa1421850:CDS |
| TTTGAAGGAGGAATTTGTTA+GGG | 0.460026 | tig0025315:-22581 | Msa1421850:CDS |
| GGCAGAACCGGTGATGCAGC+AGG | 0.464683 | tig0025315:+23577 | None:intergenic |
| ATCATGGCTCTGATCCTCAT+TGG | 0.465937 | tig0025315:+20281 | None:intergenic |
| TGTCACAGATATGTAGAGAT+TGG | 0.471518 | tig0025315:-20803 | Msa1421850:intron |
| AGCATCAGCTCCAACTTCAT+TGG | 0.473132 | tig0025315:+21681 | None:intergenic |
| ATAGGTGGAAGGCATGGAAT+AGG | 0.474520 | tig0025315:-20704 | Msa1421850:CDS |
| TTAAATGCCTTGTTCCATCA+TGG | 0.476647 | tig0025315:+20265 | None:intergenic |
| TTTGCAGAGTTAGTGTATGC+TGG | 0.481427 | tig0025315:-20524 | Msa1421850:CDS |
| GCATTCCAGTATCAGTGAAC+GGG | 0.482377 | tig0025315:-20769 | Msa1421850:CDS |
| GCTGCATCACCGGTTCTGCC+AGG | 0.483785 | tig0025315:-23574 | Msa1421850:CDS |
| TCCTTTCCCTGTACAACCAT+GGG | 0.485988 | tig0025315:+21654 | None:intergenic |
| TTGTGGCTCCATGGAGGGAG+TGG | 0.488608 | tig0025315:-21488 | Msa1421850:CDS |
| ATAGTAGGGACAGGAACCTT+TGG | 0.489226 | tig0025315:-21386 | Msa1421850:CDS |
| AAAGGTAGTGCTTCTGTGAC+GGG | 0.492018 | tig0025315:-20410 | Msa1421850:CDS |
| TACAGGGAAAGGAAATGATC+AGG | 0.493714 | tig0025315:-21644 | Msa1421850:intron |
| TGATCCACTTCGCGAATCGA+TGG | 0.495410 | tig0025315:-20492 | Msa1421850:CDS |
| ACACATCGGTTGTTGTCCCC+TGG | 0.498273 | tig0025315:-22983 | Msa1421850:CDS |
| AATAAATGATGTGAAGTGAT+TGG | 0.502780 | tig0025315:-20162 | Msa1421850:three_prime_UTR |
| GTATTCCCTTGCCTGCGTGC+AGG | 0.504172 | tig0025315:-22553 | Msa1421850:CDS |
| AGAAACAGTAGCATCTCTAG+AGG | 0.506795 | tig0025315:-23918 | Msa1421850:five_prime_UTR |
| TGAATGATAAAGGCGTTGCC+TGG | 0.508431 | tig0025315:+23556 | None:intergenic |
| TAGAGCACCTGCTGCATCAC+CGG | 0.510676 | tig0025315:-23584 | Msa1421850:CDS |
| AGTTAAATGTTGTGGCTCCA+TGG | 0.510694 | tig0025315:-21497 | Msa1421850:CDS |
| GAATCCATCGATTCGCGAAG+TGG | 0.511909 | tig0025315:+20488 | None:intergenic |
| AGTTAGTGTATGCTGGAAGA+TGG | 0.513144 | tig0025315:-20517 | Msa1421850:CDS |
| GTTAGTCGTGAAGGATTTGA+AGG | 0.514713 | tig0025315:-22596 | Msa1421850:CDS |
| ATTGCACCTGCACGCAGGCA+AGG | 0.515767 | tig0025315:+22547 | None:intergenic |
| AATATGCATATACCTCAGCC+AGG | 0.516620 | tig0025315:+22965 | None:intergenic |
| TTGCACCTGCACGCAGGCAA+GGG | 0.517987 | tig0025315:+22548 | None:intergenic |
| GCTCGTTTGGAGCATCCTCT+GGG | 0.518543 | tig0025315:+21124 | None:intergenic |
| TACAATCATGCTGATGCTGT+TGG | 0.521896 | tig0025315:-20326 | Msa1421850:CDS |
| TGGAATAGGCCGTGTCGACT+TGG | 0.524552 | tig0025315:-20690 | Msa1421850:CDS |
| ATTGGAAGGTTTAGAAGAGA+AGG | 0.525282 | tig0025315:-22641 | Msa1421850:CDS |
| GTTGTTCTGGCTTATAGTGG+TGG | 0.525983 | tig0025315:-23011 | Msa1421850:CDS |
| GTGGATATTGCCAATGAAGT+TGG | 0.528679 | tig0025315:-21691 | Msa1421850:CDS |
| ATACCTCTTGCATGTTTGGT+AGG | 0.530313 | tig0025315:+23776 | None:intergenic |
| AAGGTTGTTCTGGCTTATAG+TGG | 0.530508 | tig0025315:-23014 | Msa1421850:CDS |
| GTAATATCCCACTCCCTCCA+TGG | 0.530801 | tig0025315:+21480 | None:intergenic |
| GGAGCTGATGCTGTCTCCCA+TGG | 0.531705 | tig0025315:-21670 | Msa1421850:CDS |
| GACTAACTGAGAAGCTCCGC+TGG | 0.532858 | tig0025315:+22612 | None:intergenic |
| TATGAGAGGAAGTATTTGCT+CGG | 0.533964 | tig0025315:-22523 | Msa1421850:CDS |
| ACAATCATGCTGATGCTGTT+GGG | 0.534657 | tig0025315:-20325 | Msa1421850:CDS |
| CGGTTGTTGTCCCCTGGCTG+AGG | 0.535155 | tig0025315:-22977 | Msa1421850:intron |
| TTCCTTTCCCTGTACAACCA+TGG | 0.535229 | tig0025315:+21653 | None:intergenic |
| TCCCATGGTTGTACAGGGAA+AGG | 0.539361 | tig0025315:-21655 | Msa1421850:CDS |
| AATCCATATATAGTAGGGAC+AGG | 0.540052 | tig0025315:-21395 | Msa1421850:CDS |
| AGCTTCTCAGTTAGTCGTGA+AGG | 0.542860 | tig0025315:-22605 | Msa1421850:CDS |
| CGAGGAGTTTACGAAACTCC+AGG | 0.546528 | tig0025315:-20638 | Msa1421850:CDS |
| AGTCGTGAAGGATTTGAAGG+AGG | 0.547776 | tig0025315:-22593 | Msa1421850:CDS |
| TAAAGGTAGTGCTTCTGTGA+CGG | 0.549158 | tig0025315:-20411 | Msa1421850:CDS |
| GATATTTCTTCATTTGAGAG+TGG | 0.551295 | tig0025315:-20356 | Msa1421850:CDS |
| GGCTCTTCATGCCTACAATA+CGG | 0.561976 | tig0025315:+20660 | None:intergenic |
| GTGAAGAGAATGGTGCCACC+TGG | 0.566636 | tig0025315:+20620 | None:intergenic |
| GGCATTCCAGTATCAGTGAA+CGG | 0.567431 | tig0025315:-20770 | Msa1421850:CDS |
| CTGTCTCCCATGGTTGTACA+GGG | 0.569616 | tig0025315:-21660 | Msa1421850:CDS |
| AATGAGGATCAGAGCCATGA+TGG | 0.575339 | tig0025315:-20279 | Msa1421850:CDS |
| CTGGAGTTTCGTAAACTCCT+CGG | 0.575914 | tig0025315:+20639 | None:intergenic |
| GAATCCCAAGTTAAATGTTG+TGG | 0.576942 | tig0025315:-21505 | Msa1421850:CDS |
| AGCTTTATGGTCTTCCAATG+AGG | 0.578462 | tig0025315:-20295 | Msa1421850:CDS |
| CCTCATGAGTTATGTGCCAA+AGG | 0.582533 | tig0025315:+21370 | None:intergenic |
| AACGGGAAGAGACTTTCTCC+AGG | 0.583209 | tig0025315:-20752 | Msa1421850:CDS |
| GGAGCCACAACATTTAACTT+GGG | 0.583839 | tig0025315:+21501 | None:intergenic |
| CATAAATTGCACCTGCACGC+AGG | 0.585164 | tig0025315:+22542 | None:intergenic |
| TGCTAAGAAGCATAACGTAC+CGG | 0.586709 | tig0025315:-21433 | Msa1421850:CDS |
| AAATGTTGTGGCTCCATGGA+GGG | 0.588551 | tig0025315:-21493 | Msa1421850:CDS |
| AGCTCGCCCTGTAATTGCAA+AGG | 0.595419 | tig0025315:-22491 | Msa1421850:intron |
| ATTGTACCTTTGCAATTACA+GGG | 0.595573 | tig0025315:+22485 | None:intergenic |
| AATGAGATAGGTGGAAGGCA+TGG | 0.596201 | tig0025315:-20710 | Msa1421850:CDS |
| AGAGATTTCTGAGACCAAGA+AGG | 0.598640 | tig0025315:-23063 | Msa1421850:CDS |
| TCTTGCTGCAGTGAAGAGAA+TGG | 0.602817 | tig0025315:+20610 | None:intergenic |
| ATCAGAGCCATGATGGAACA+AGG | 0.603309 | tig0025315:-20272 | Msa1421850:CDS |
| GAAACAGTAGCATCTCTAGA+GGG | 0.606612 | tig0025315:-23917 | Msa1421850:five_prime_UTR |
| TAGGAGCAATAGCAATAACT+GGG | 0.610995 | tig0025315:+23795 | None:intergenic |
| ACTGACTTGACAGGCTATGG+TGG | 0.612505 | tig0025315:-21710 | Msa1421850:intron |
| AACGCCTTTATCATTCAAAG+AGG | 0.614121 | tig0025315:-23550 | Msa1421850:intron |
| GTAGTGCTTCTGTGACGGGT+CGG | 0.618058 | tig0025315:-20406 | Msa1421850:CDS |
| TGTGGCTCCATGGAGGGAGT+GGG | 0.626032 | tig0025315:-21487 | Msa1421850:CDS |
| GCTCCTACCAAACATGCAAG+AGG | 0.634689 | tig0025315:-23779 | Msa1421850:intron |
| GGTGCTGCAAGTAAACCTCA+AGG | 0.648225 | tig0025315:-23343 | Msa1421850:intron |
| AGCTGAATGAGATAGGTGGA+AGG | 0.657500 | tig0025315:-20715 | Msa1421850:CDS |
| ATATGCATATACCTCAGCCA+GGG | 0.663707 | tig0025315:+22966 | None:intergenic |
| GAAGAGAAGGCAAAAGCCAG+CGG | 0.667966 | tig0025315:-22628 | Msa1421850:CDS |
| GGTCTTCAACCAAGTCGACA+CGG | 0.670749 | tig0025315:+20681 | None:intergenic |
| ATTGTAGGCATGAAGAGCCG+AGG | 0.671284 | tig0025315:-20656 | Msa1421850:CDS |
| TAGTGGTGGCTTAGACACAT+CGG | 0.675543 | tig0025315:-22997 | Msa1421850:CDS |
| GTGCAGGTGCAATTTATGAG+AGG | 0.680391 | tig0025315:-22537 | Msa1421850:CDS |
| CCTTTGGCACATAACTCATG+AGG | 0.680674 | tig0025315:-21370 | Msa1421850:intron |
| TAAATGTTGTGGCTCCATGG+AGG | 0.686850 | tig0025315:-21494 | Msa1421850:CDS |
| GGAGGGAGTGGGATATTACA+GGG | 0.688013 | tig0025315:-21476 | Msa1421850:CDS |
| TATGCATATACCTCAGCCAG+GGG | 0.712359 | tig0025315:+22967 | None:intergenic |
| GCTGAGCTGAATGAGATAGG+TGG | 0.717992 | tig0025315:-20719 | Msa1421850:CDS |
| AGGAGCAATAGCAATAACTG+GGG | 0.751488 | tig0025315:+23796 | None:intergenic |
| CATGTTGACTGCAGACCCAG+AGG | 0.770433 | tig0025315:-21139 | Msa1421850:CDS |
| GGAGTTTACGAAACTCCAGG+TGG | 0.771741 | tig0025315:-20635 | Msa1421850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATAGATATCAAAA+TGG | + | tig0025315:22106-22125 | None:intergenic | 10.0% |
| !! | ATGTATTATTAATTACTATT+AGG | - | tig0025315:22485-22504 | Msa1421850:intron | 10.0% |
| !! | TGTTATATTTATAATTGTTA+AGG | - | tig0025315:22549-22568 | Msa1421850:CDS | 10.0% |
| !!! | AATGTTTTAATTTGTATTAA+TGG | + | tig0025315:23230-23249 | None:intergenic | 10.0% |
| !! | AAATACTAAAATTCAAACAA+TGG | + | tig0025315:20626-20645 | None:intergenic | 15.0% |
| !! | TATTTATAATTGTTAAGGTT+CGG | - | tig0025315:22554-22573 | Msa1421850:CDS | 15.0% |
| !! | ATATTCTGCAAAAACTAATA+TGG | - | tig0025315:20256-20275 | Msa1421850:exon | 20.0% |
| !!! | CAATTTTCTCAAATGATTAT+TGG | + | tig0025315:20875-20894 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTAATGTCTCTAA+CGG | - | tig0025315:20970-20989 | Msa1421850:intron | 20.0% |
| !! | ACTAAAAGGTAAATTGAATA+AGG | - | tig0025315:21072-21091 | Msa1421850:intron | 20.0% |
| !! | TAAATTGTGAGAATATGAAA+AGG | + | tig0025315:21179-21198 | None:intergenic | 20.0% |
| !! | AGACTAATTGTCATATTTAT+GGG | + | tig0025315:21309-21328 | None:intergenic | 20.0% |
| !!! | TAACAAATGCAAATTTTCTT+AGG | - | tig0025315:21431-21450 | Msa1421850:CDS | 20.0% |
| !!! | AACAAATGCAAATTTTCTTA+GGG | - | tig0025315:21432-21451 | Msa1421850:CDS | 20.0% |
| !!! | TTTTATAGATATCAAAATGG+AGG | + | tig0025315:22103-22122 | None:intergenic | 20.0% |
| !! | GATTCTTGTAAAATATGAAA+AGG | + | tig0025315:22236-22255 | None:intergenic | 20.0% |
| !! | GAAAATAGAAATGTGAAATT+TGG | + | tig0025315:22290-22309 | None:intergenic | 20.0% |
| !! | AAATAATTGGCATGATTAAT+TGG | + | tig0025315:22519-22538 | None:intergenic | 20.0% |
| !! | CAAAAAATCCATATATAGTA+GGG | - | tig0025315:22705-22724 | Msa1421850:intron | 20.0% |
| !!! | TATAGTCATGTTTTTTAAAG+AGG | - | tig0025315:23034-23053 | Msa1421850:CDS | 20.0% |
| !!! | TTAATTTGTATTAATGGTTG+TGG | + | tig0025315:23224-23243 | None:intergenic | 20.0% |
| ! | TCCAAACAACCATAATAAAA+AGG | - | tig0025315:20211-20230 | Msa1421850:three_prime_UTR | 25.0% |
| !! | ACCTTTTTATTATGGTTGTT+TGG | + | tig0025315:20215-20234 | None:intergenic | 25.0% |
| ! | AAACAACCATAATAAAAAGG+TGG | - | tig0025315:20214-20233 | Msa1421850:three_prime_UTR | 25.0% |
| ! | AAAAAATCATAGATAGAGCT+AGG | + | tig0025315:20374-20393 | None:intergenic | 25.0% |
| ! | AAACATAGTAAACAACAGTT+AGG | + | tig0025315:20493-20512 | None:intergenic | 25.0% |
| !!! | GCATGTTTGTGTATTTTTAA+GGG | + | tig0025315:20583-20602 | None:intergenic | 25.0% |
| !!! | TGCATGTTTGTGTATTTTTA+AGG | + | tig0025315:20584-20603 | None:intergenic | 25.0% |
| !!! | GTTTTTTCTTTTGCATGTTT+TGG | - | tig0025315:20698-20717 | Msa1421850:CDS | 25.0% |
| ! | TAAATTGAATAAGGTTGTTC+TGG | - | tig0025315:21081-21100 | Msa1421850:intron | 25.0% |
| ! | TTATATTTCAGAGAGAACTA+TGG | - | tig0025315:21231-21250 | Msa1421850:intron | 25.0% |
| ! | GAGACTAATTGTCATATTTA+TGG | + | tig0025315:21310-21329 | None:intergenic | 25.0% |
| !! | ACAAATGCAAATTTTCTTAG+GGG | - | tig0025315:21433-21452 | Msa1421850:CDS | 25.0% |
| ! | AAAACAATCACAAAGCATAA+GGG | + | tig0025315:21695-21714 | None:intergenic | 25.0% |
| ! | AAAAACAATCACAAAGCATA+AGG | + | tig0025315:21696-21715 | None:intergenic | 25.0% |
| !! | CTCTACAAAATTGACTTATA+AGG | + | tig0025315:21906-21925 | None:intergenic | 25.0% |
| ! | CTCATAATTAGTTCATTCTA+AGG | - | tig0025315:22146-22165 | Msa1421850:intron | 25.0% |
| !! | ATATGAAAAGGTATACTAAG+AGG | + | tig0025315:22224-22243 | None:intergenic | 25.0% |
| ! | ACACGTTAGAAGAAAATAAT+TGG | + | tig0025315:22532-22551 | None:intergenic | 25.0% |
| !!! | TATATGGATTTTTTGGTTAC+AGG | + | tig0025315:22700-22719 | None:intergenic | 25.0% |
| !!! | CCTACTATATATGGATTTTT+TGG | + | tig0025315:22707-22726 | None:intergenic | 25.0% |
| ! | CCAAAAAATCCATATATAGT+AGG | - | tig0025315:22704-22723 | Msa1421850:intron | 25.0% |
| ! | CAAATCATAAAGCATAGTAA+TGG | + | tig0025315:22810-22829 | None:intergenic | 25.0% |
| !! | TTTGAACGTGATTTTAAATG+AGG | + | tig0025315:22853-22872 | None:intergenic | 25.0% |
| !! | AACATGTACATATCCTTTTT+AGG | + | tig0025315:22952-22971 | None:intergenic | 25.0% |
| ! | ATATTTGAATGCGATTATCA+AGG | - | tig0025315:23092-23111 | Msa1421850:CDS | 25.0% |
| ! | AGAGTCCTTATAGTTTATAT+AGG | - | tig0025315:23723-23742 | Msa1421850:intron | 25.0% |
| ! | GAGTCCTTATAGTTTATATA+GGG | - | tig0025315:23724-23743 | Msa1421850:intron | 25.0% |
| ! | TCTTCCCTATATAAACTATA+AGG | + | tig0025315:23731-23750 | None:intergenic | 25.0% |
| !!! | CATTTAAATGTTGCTTTGTT+TGG | - | tig0025315:23856-23875 | Msa1421850:five_prime_UTR | 25.0% |
| !! | TTGTGGAACTTTTATTATTG+TGG | - | tig0025315:23918-23937 | Msa1421850:five_prime_UTR | 25.0% |
| !! | TGTGGAACTTTTATTATTGT+GGG | - | tig0025315:23919-23938 | Msa1421850:five_prime_UTR | 25.0% |
| ! | AATAAATGATGTGAAGTGAT+TGG | - | tig0025315:23943-23962 | Msa1421850:five_prime_UTR | 25.0% |
| TATAATACCTCTTGCATGTT+TGG | + | tig0025315:20336-20355 | None:intergenic | 30.0% | |
| ATAGTAAACAACAGTTAGGA+GGG | + | tig0025315:20489-20508 | None:intergenic | 30.0% | |
| !!! | TGGATGTTTTATTTGTCTGA+TGG | - | tig0025315:20676-20695 | Msa1421850:CDS | 30.0% |
| AACATAACACTGAACATATC+TGG | + | tig0025315:20935-20954 | None:intergenic | 30.0% | |
| ! | CACTTTAGAAACTGAATTGA+CGG | - | tig0025315:21376-21395 | Msa1421850:CDS | 30.0% |
| TACTTTAATTGCTGCATGTT+TGG | - | tig0025315:21407-21426 | Msa1421850:CDS | 30.0% | |
| ! | CAAATGCAAATTTTCTTAGG+GGG | - | tig0025315:21434-21453 | Msa1421850:CDS | 30.0% |
| ! | ATTTGAAGGAGGAATTTGTT+AGG | - | tig0025315:21523-21542 | Msa1421850:CDS | 30.0% |
| !! | TTTGAAGGAGGAATTTGTTA+GGG | - | tig0025315:21524-21543 | Msa1421850:CDS | 30.0% |
| ATTGTACCTTTGCAATTACA+GGG | + | tig0025315:21623-21642 | None:intergenic | 30.0% | |
| AATTGTACCTTTGCAATTAC+AGG | + | tig0025315:21624-21643 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCAGTAGCTGAGT+CGG | - | tig0025315:21743-21762 | Msa1421850:intron | 30.0% |
| CAATTAAAGCAAAGTTTCAC+TGG | + | tig0025315:22027-22046 | None:intergenic | 30.0% | |
| !! | TGCTTTATGATTTGTTGTCA+CGG | - | tig0025315:22816-22835 | Msa1421850:intron | 30.0% |
| TTTCCAATATGTGACAATGA+AGG | - | tig0025315:22897-22916 | Msa1421850:intron | 30.0% | |
| TTCCAATATGTGACAATGAA+GGG | - | tig0025315:22898-22917 | Msa1421850:intron | 30.0% | |
| TTTGATATCACTAAGAAGCA+CGG | + | tig0025315:23188-23207 | None:intergenic | 30.0% | |
| ! | GTTTAGTTTCACTACTTACT+TGG | - | tig0025315:23273-23292 | Msa1421850:intron | 30.0% |
| ! | GTGAGTTTGAAACTGTATAA+AGG | - | tig0025315:23677-23696 | Msa1421850:intron | 30.0% |
| GATATTTCTTCATTTGAGAG+TGG | - | tig0025315:23749-23768 | Msa1421850:intron | 30.0% | |
| GTTGGGTTTATAAAGCTTTA+TGG | - | tig0025315:23797-23816 | Msa1421850:CDS | 30.0% | |
| ! | CACTCACCACCTTTTTATTA+TGG | + | tig0025315:20223-20242 | None:intergenic | 35.0% |
| TAGGAGCAATAGCAATAACT+GGG | + | tig0025315:20313-20332 | None:intergenic | 35.0% | |
| CATAGTAAACAACAGTTAGG+AGG | + | tig0025315:20490-20509 | None:intergenic | 35.0% | |
| AACGCCTTTATCATTCAAAG+AGG | - | tig0025315:20555-20574 | Msa1421850:CDS | 35.0% | |
| AATACACAAACATGCATGCA+TGG | - | tig0025315:20588-20607 | Msa1421850:CDS | 35.0% | |
| !! | TGATATGCATGTGCTTTTTG+TGG | - | tig0025315:20656-20675 | Msa1421850:CDS | 35.0% |
| ! | TTGAGTCCAAGAAGAAGTTT+TGG | - | tig0025315:20741-20760 | Msa1421850:CDS | 35.0% |
| TGGGCAGATTATAACATACT+TGG | + | tig0025315:21290-21309 | None:intergenic | 35.0% | |
| ATTGGAAGGTTTAGAAGAGA+AGG | - | tig0025315:21464-21483 | Msa1421850:CDS | 35.0% | |
| !! | TATGAGAGGAAGTATTTGCT+CGG | - | tig0025315:21582-21601 | Msa1421850:intron | 35.0% |
| CTGCAATATGAGACTCTTAA+CGG | + | tig0025315:21843-21862 | None:intergenic | 35.0% | |
| AGAGTTATTGTTCATGTTCC+AGG | - | tig0025315:21922-21941 | Msa1421850:intron | 35.0% | |
| CTAATACCATCTTAGCAGAT+GGG | + | tig0025315:21959-21978 | None:intergenic | 35.0% | |
| TCTAATACCATCTTAGCAGA+TGG | + | tig0025315:21960-21979 | None:intergenic | 35.0% | |
| GTATTTACAAGACCTGTTGT+TGG | - | tig0025315:21980-21999 | Msa1421850:intron | 35.0% | |
| GAGGTTCTTAGAATTTGAGT+TGG | + | tig0025315:22084-22103 | None:intergenic | 35.0% | |
| TTTAGATCCTACCTTTCCTT+AGG | - | tig0025315:22180-22199 | Msa1421850:intron | 35.0% | |
| GTATACTAAGAGGTAACACA+TGG | + | tig0025315:22214-22233 | None:intergenic | 35.0% | |
| ATGCAATACCAGTAAAGATC+CGG | + | tig0025315:22347-22366 | None:intergenic | 35.0% | |
| GAATCCCAAGTTAAATGTTG+TGG | - | tig0025315:22600-22619 | Msa1421850:CDS | 35.0% | |
| !!! | GATTTTTTGGTTACAGGAAC+CGG | + | tig0025315:22694-22713 | None:intergenic | 35.0% |
| AATCCATATATAGTAGGGAC+AGG | - | tig0025315:22710-22729 | Msa1421850:intron | 35.0% | |
| TCCAGCAAATGAACCTAAAA+AGG | - | tig0025315:22936-22955 | Msa1421850:intron | 35.0% | |
| !!! | TCCTTTTTAGGTTCATTTGC+TGG | + | tig0025315:22940-22959 | None:intergenic | 35.0% |
| CATTAACAACATGCTTACTC+TGG | + | tig0025315:23006-23025 | None:intergenic | 35.0% | |
| TTAAAGAGGCCCATAAGTTA+TGG | - | tig0025315:23048-23067 | Msa1421850:CDS | 35.0% | |
| TAAAGAGGCCCATAAGTTAT+GGG | - | tig0025315:23049-23068 | Msa1421850:CDS | 35.0% | |
| TATGACTAATGATGCCTCAA+TGG | + | tig0025315:23075-23094 | None:intergenic | 35.0% | |
| TGTCACAGATATGTAGAGAT+TGG | - | tig0025315:23302-23321 | Msa1421850:intron | 35.0% | |
| ! | TTAAATGCCTTGTTCCATCA+TGG | + | tig0025315:23843-23862 | None:intergenic | 35.0% |
| CTTGTTCTTGACAATGTTTG+TGG | - | tig0025315:23901-23920 | Msa1421850:five_prime_UTR | 35.0% | |
| AGAAACAGTAGCATCTCTAG+AGG | - | tig0025315:20187-20206 | Msa1421850:three_prime_UTR | 40.0% | |
| GAAACAGTAGCATCTCTAGA+GGG | - | tig0025315:20188-20207 | Msa1421850:three_prime_UTR | 40.0% | |
| AGGAGCAATAGCAATAACTG+GGG | + | tig0025315:20312-20331 | None:intergenic | 40.0% | |
| GTAGGAGCAATAGCAATAAC+TGG | + | tig0025315:20314-20333 | None:intergenic | 40.0% | |
| ATACCTCTTGCATGTTTGGT+AGG | + | tig0025315:20332-20351 | None:intergenic | 40.0% | |
| GGCACCTCTTTGAATGATAA+AGG | + | tig0025315:20562-20581 | None:intergenic | 40.0% | |
| AACCTCAAGGTGAGATTGTT+TGG | - | tig0025315:20775-20794 | Msa1421850:CDS | 40.0% | |
| TGGTGTATGACACTAACACA+TGG | + | tig0025315:20915-20934 | None:intergenic | 40.0% | |
| !! | AGAGATTTCTGAGACCAAGA+AGG | - | tig0025315:21042-21061 | Msa1421850:intron | 40.0% |
| ! | TTTTAGTCCAGCAACCTTCT+TGG | + | tig0025315:21059-21078 | None:intergenic | 40.0% |
| AAGAAGGTTGCTGGACTAAA+AGG | - | tig0025315:21058-21077 | Msa1421850:intron | 40.0% | |
| !! | AAGGTTGTTCTGGCTTATAG+TGG | - | tig0025315:21091-21110 | Msa1421850:intron | 40.0% |
| ATATGCATATACCTCAGCCA+GGG | + | tig0025315:21142-21161 | None:intergenic | 40.0% | |
| AATATGCATATACCTCAGCC+AGG | + | tig0025315:21143-21162 | None:intergenic | 40.0% | |
| GTTAGTCGTGAAGGATTTGA+AGG | - | tig0025315:21509-21528 | Msa1421850:CDS | 40.0% | |
| ! | GCAAAGGTACAATTCTGCTT+TGG | - | tig0025315:21630-21649 | Msa1421850:intron | 40.0% |
| AGCTATGTAGAAGTTGAGTG+GGG | + | tig0025315:21815-21834 | None:intergenic | 40.0% | |
| GAGCTATGTAGAAGTTGAGT+GGG | + | tig0025315:21816-21835 | None:intergenic | 40.0% | |
| TGAGCTATGTAGAAGTTGAG+TGG | + | tig0025315:21817-21836 | None:intergenic | 40.0% | |
| CAATATGAGACTCTTAACGG+AGG | + | tig0025315:21840-21859 | None:intergenic | 40.0% | |
| CGTTAAGAGTCTCATATTGC+AGG | - | tig0025315:21841-21860 | Msa1421850:intron | 40.0% | |
| TTATTGTTCATGTTCCAGGC+AGG | - | tig0025315:21926-21945 | Msa1421850:intron | 40.0% | |
| TATTGTTCATGTTCCAGGCA+GGG | - | tig0025315:21927-21946 | Msa1421850:intron | 40.0% | |
| CACTGGAGAGTGAACTATTT+GGG | + | tig0025315:22010-22029 | None:intergenic | 40.0% | |
| TCACTGGAGAGTGAACTATT+TGG | + | tig0025315:22011-22030 | None:intergenic | 40.0% | |
| CTCAACCCTACAAAACCATA+TGG | + | tig0025315:22055-22074 | None:intergenic | 40.0% | |
| !!! | ATGGTTTTGTAGGGTTGAGT+TGG | - | tig0025315:22056-22075 | Msa1421850:intron | 40.0% |
| ! | GAAAGGTAGGATCTAAAGCT+AGG | + | tig0025315:22177-22196 | None:intergenic | 40.0% |
| ACACGGATGTTGAGAACAAA+TGG | + | tig0025315:22315-22334 | None:intergenic | 40.0% | |
| !! | TTGATGTCTACTGACTTGAC+AGG | - | tig0025315:22386-22405 | Msa1421850:intron | 40.0% |
| GTGGATATTGCCAATGAAGT+TGG | - | tig0025315:22414-22433 | Msa1421850:intron | 40.0% | |
| TACAGGGAAAGGAAATGATC+AGG | - | tig0025315:22461-22480 | Msa1421850:intron | 40.0% | |
| CTTGGGATTCAGAGCAAAAA+AGG | + | tig0025315:22590-22609 | None:intergenic | 40.0% | |
| ! | GGAGCCACAACATTTAACTT+GGG | + | tig0025315:22607-22626 | None:intergenic | 40.0% |
| TGGAGCCACAACATTTAACT+TGG | + | tig0025315:22608-22627 | None:intergenic | 40.0% | |
| AGTTAAATGTTGTGGCTCCA+TGG | - | tig0025315:22608-22627 | Msa1421850:CDS | 40.0% | |
| ! | TGCTAAGAAGCATAACGTAC+CGG | - | tig0025315:22672-22691 | Msa1421850:intron | 40.0% |
| GTTCCTGTCCCTACTATATA+TGG | + | tig0025315:22716-22735 | None:intergenic | 40.0% | |
| CACCCTTCATTGTCACATAT+TGG | + | tig0025315:22903-22922 | None:intergenic | 40.0% | |
| ! | GACAATGAAGGGTGATGTTT+TGG | - | tig0025315:22909-22928 | Msa1421850:intron | 40.0% |
| CTCAATGGCCCATAACTTAT+GGG | + | tig0025315:23060-23079 | None:intergenic | 40.0% | |
| GATTATCAAGGATCGCAACA+TGG | - | tig0025315:23104-23123 | Msa1421850:intron | 40.0% | |
| GTAGAGATTGGATTTGAGTC+AGG | - | tig0025315:23314-23333 | Msa1421850:intron | 40.0% | |
| GAGACTTTCTCCAGGAAATT+TGG | - | tig0025315:23361-23380 | Msa1421850:CDS | 40.0% | |
| TTGGTTGAAGACCGTATTGT+AGG | - | tig0025315:23434-23453 | Msa1421850:intron | 40.0% | |
| TTTGCAGAGTTAGTGTATGC+TGG | - | tig0025315:23581-23600 | Msa1421850:CDS | 40.0% | |
| AGTTAGTGTATGCTGGAAGA+TGG | - | tig0025315:23588-23607 | Msa1421850:intron | 40.0% | |
| ! | CGAATCGATGGATTCATTCA+TGG | - | tig0025315:23625-23644 | Msa1421850:intron | 40.0% |
| AAGATCTCACAGACTACAAC+AGG | - | tig0025315:23650-23669 | Msa1421850:intron | 40.0% | |
| TAAAGGTAGTGCTTCTGTGA+CGG | - | tig0025315:23694-23713 | Msa1421850:intron | 40.0% | |
| TACAATCATGCTGATGCTGT+TGG | - | tig0025315:23779-23798 | Msa1421850:intron | 40.0% | |
| ACAATCATGCTGATGCTGTT+GGG | - | tig0025315:23780-23799 | Msa1421850:CDS | 40.0% | |
| ! | AGCTTTATGGTCTTCCAATG+AGG | - | tig0025315:23810-23829 | Msa1421850:CDS | 40.0% |
| ! | GAGGGTGCAGATAGCAAAAT+TGG | + | tig0025315:20471-20490 | None:intergenic | 45.0% |
| !! | TGAATGATAAAGGCGTTGCC+TGG | + | tig0025315:20552-20571 | None:intergenic | 45.0% |
| GCAGCACCAAAACTTCTTCT+TGG | + | tig0025315:20750-20769 | None:intergenic | 45.0% | |
| AGCCAAACAATCTCACCTTG+AGG | + | tig0025315:20780-20799 | None:intergenic | 45.0% | |
| ! | TGAAGTACCAACACAGACAC+TGG | - | tig0025315:20827-20846 | Msa1421850:intron | 45.0% |
| !! | GTTGTTCTGGCTTATAGTGG+TGG | - | tig0025315:21094-21113 | Msa1421850:intron | 45.0% |
| TAGTGGTGGCTTAGACACAT+CGG | - | tig0025315:21108-21127 | Msa1421850:intron | 45.0% | |
| TATGCATATACCTCAGCCAG+GGG | + | tig0025315:21141-21160 | None:intergenic | 45.0% | |
| GTTTGCTTCACAGCTGATCT+AGG | - | tig0025315:21264-21283 | Msa1421850:intron | 45.0% | |
| TTCTTAGGGGGCAAGTGAAT+TGG | - | tig0025315:21446-21465 | Msa1421850:CDS | 45.0% | |
| AGCTTCTCAGTTAGTCGTGA+AGG | - | tig0025315:21500-21519 | Msa1421850:CDS | 45.0% | |
| AGTCGTGAAGGATTTGAAGG+AGG | - | tig0025315:21512-21531 | Msa1421850:CDS | 45.0% | |
| GTGCAGGTGCAATTTATGAG+AGG | - | tig0025315:21568-21587 | Msa1421850:intron | 45.0% | |
| GTCTGTATGACCTTACCCTT+GGG | + | tig0025315:21769-21788 | None:intergenic | 45.0% | |
| TGTCTGTATGACCTTACCCT+TGG | + | tig0025315:21770-21789 | None:intergenic | 45.0% | |
| ATGTAGAAGTTGAGTGGGGT+GGG | + | tig0025315:21811-21830 | None:intergenic | 45.0% | |
| TATGTAGAAGTTGAGTGGGG+TGG | + | tig0025315:21812-21831 | None:intergenic | 45.0% | |
| GCAGGAGATCTAGTCTGAAA+AGG | - | tig0025315:21859-21878 | Msa1421850:intron | 45.0% | |
| TATTTGGGAAGGCCAACAAC+AGG | + | tig0025315:21995-22014 | None:intergenic | 45.0% | |
| GGAGAGTGAACTATTTGGGA+AGG | + | tig0025315:22006-22025 | None:intergenic | 45.0% | |
| GCTTTAATTGCAGCGCCATA+TGG | - | tig0025315:22037-22056 | Msa1421850:intron | 45.0% | |
| !!! | CAGCGCCATATGGTTTTGTA+GGG | - | tig0025315:22047-22066 | Msa1421850:intron | 45.0% |
| ! | GTAGGATCTAAAGCTAGGTG+AGG | + | tig0025315:22172-22191 | None:intergenic | 45.0% |
| ACATCCGTGTAACCTTGTAC+CGG | - | tig0025315:22325-22344 | Msa1421850:intron | 45.0% | |
| AGATCCGGTACAAGGTTACA+CGG | + | tig0025315:22332-22351 | None:intergenic | 45.0% | |
| ACCTTGTACCGGATCTTTAC+TGG | - | tig0025315:22336-22355 | Msa1421850:intron | 45.0% | |
| ACCAGTAAAGATCCGGTACA+AGG | + | tig0025315:22340-22359 | None:intergenic | 45.0% | |
| !! | TCTACTGACTTGACAGGCTA+TGG | - | tig0025315:22392-22411 | Msa1421850:intron | 45.0% |
| AGCATCAGCTCCAACTTCAT+TGG | + | tig0025315:22427-22446 | None:intergenic | 45.0% | |
| TCCTTTCCCTGTACAACCAT+GGG | + | tig0025315:22454-22473 | None:intergenic | 45.0% | |
| TTCCTTTCCCTGTACAACCA+TGG | + | tig0025315:22455-22474 | None:intergenic | 45.0% | |
| TAAATGTTGTGGCTCCATGG+AGG | - | tig0025315:22611-22630 | Msa1421850:CDS | 45.0% | |
| AAATGTTGTGGCTCCATGGA+GGG | - | tig0025315:22612-22631 | Msa1421850:CDS | 45.0% | |
| ATAGTAGGGACAGGAACCTT+TGG | - | tig0025315:22719-22738 | Msa1421850:intron | 45.0% | |
| CCTCATGAGTTATGTGCCAA+AGG | + | tig0025315:22738-22757 | None:intergenic | 45.0% | |
| CCTTTGGCACATAACTCATG+AGG | - | tig0025315:22735-22754 | Msa1421850:intron | 45.0% | |
| TGGCACATAACTCATGAGGT+AGG | - | tig0025315:22739-22758 | Msa1421850:intron | 45.0% | |
| CCTCAATGGCCCATAACTTA+TGG | + | tig0025315:23061-23080 | None:intergenic | 45.0% | |
| CCATAAGTTATGGGCCATTG+AGG | - | tig0025315:23058-23077 | Msa1421850:CDS | 45.0% | |
| GGCATTCCAGTATCAGTGAA+CGG | - | tig0025315:23335-23354 | Msa1421850:intron | 45.0% | |
| GCATTCCAGTATCAGTGAAC+GGG | - | tig0025315:23336-23355 | Msa1421850:intron | 45.0% | |
| AGCTCAGCAACCAAATTTCC+TGG | + | tig0025315:23374-23393 | None:intergenic | 45.0% | |
| GTTGCTGAGCTGAATGAGAT+AGG | - | tig0025315:23383-23402 | Msa1421850:intron | 45.0% | |
| AGCTGAATGAGATAGGTGGA+AGG | - | tig0025315:23390-23409 | Msa1421850:intron | 45.0% | |
| AATGAGATAGGTGGAAGGCA+TGG | - | tig0025315:23395-23414 | Msa1421850:intron | 45.0% | |
| ! | ATAGGTGGAAGGCATGGAAT+AGG | - | tig0025315:23401-23420 | Msa1421850:intron | 45.0% |
| GGCTCTTCATGCCTACAATA+CGG | + | tig0025315:23448-23467 | None:intergenic | 45.0% | |
| CTGGAGTTTCGTAAACTCCT+CGG | + | tig0025315:23469-23488 | None:intergenic | 45.0% | |
| TCTTGCTGCAGTGAAGAGAA+TGG | + | tig0025315:23498-23517 | None:intergenic | 45.0% | |
| AAAGGTAGTGCTTCTGTGAC+GGG | - | tig0025315:23695-23714 | Msa1421850:intron | 45.0% | |
| !! | ATCATGGCTCTGATCCTCAT+TGG | + | tig0025315:23827-23846 | None:intergenic | 45.0% |
| AATGAGGATCAGAGCCATGA+TGG | - | tig0025315:23826-23845 | Msa1421850:CDS | 45.0% | |
| ! | ATCAGAGCCATGATGGAACA+AGG | - | tig0025315:23833-23852 | Msa1421850:CDS | 45.0% |
| GCTCCTACCAAACATGCAAG+AGG | - | tig0025315:20326-20345 | Msa1421850:CDS | 50.0% | |
| ! | GGTGCTGCAAGTAAACCTCA+AGG | - | tig0025315:20762-20781 | Msa1421850:CDS | 50.0% |
| ! | TCTGAGACCAAGAAGGTTGC+TGG | - | tig0025315:21049-21068 | Msa1421850:intron | 50.0% |
| TAGGGGGCAAGTGAATTGGA+AGG | - | tig0025315:21450-21469 | Msa1421850:CDS | 50.0% | |
| GAAGAGAAGGCAAAAGCCAG+CGG | - | tig0025315:21477-21496 | Msa1421850:CDS | 50.0% | |
| CATAAATTGCACCTGCACGC+AGG | + | tig0025315:21566-21585 | None:intergenic | 50.0% | |
| AGCTCGCCCTGTAATTGCAA+AGG | - | tig0025315:21614-21633 | Msa1421850:intron | 50.0% | |
| ACCAAGCCCATCTGCTAAGA+TGG | - | tig0025315:21950-21969 | Msa1421850:intron | 50.0% | |
| ! | ACCATCTTAGCAGATGGGCT+TGG | + | tig0025315:21954-21973 | None:intergenic | 50.0% |
| !!! | GCAGCGCCATATGGTTTTGT+AGG | - | tig0025315:22046-22065 | Msa1421850:intron | 50.0% |
| GATCCTACCTTTCCTTAGGC+AGG | - | tig0025315:22184-22203 | Msa1421850:intron | 50.0% | |
| TAGCCTGCCTAAGGAAAGGT+AGG | + | tig0025315:22190-22209 | None:intergenic | 50.0% | |
| TGGATAGCCTGCCTAAGGAA+AGG | + | tig0025315:22194-22213 | None:intergenic | 50.0% | |
| ACACATGGATAGCCTGCCTA+AGG | + | tig0025315:22199-22218 | None:intergenic | 50.0% | |
| !! | ACTGACTTGACAGGCTATGG+TGG | - | tig0025315:22395-22414 | Msa1421850:intron | 50.0% |
| CTGTCTCCCATGGTTGTACA+GGG | - | tig0025315:22445-22464 | Msa1421850:intron | 50.0% | |
| TCCCATGGTTGTACAGGGAA+AGG | - | tig0025315:22450-22469 | Msa1421850:intron | 50.0% | |
| GTAATATCCCACTCCCTCCA+TGG | + | tig0025315:22628-22647 | None:intergenic | 50.0% | |
| TGGAGGGAGTGGGATATTAC+AGG | - | tig0025315:22628-22647 | Msa1421850:CDS | 50.0% | |
| GGAGGGAGTGGGATATTACA+GGG | - | tig0025315:22629-22648 | Msa1421850:CDS | 50.0% | |
| ! | CATGCTTACTCTGGCTCGTT+TGG | + | tig0025315:22997-23016 | None:intergenic | 50.0% |
| CAACCAGCCTTAACCGTAAC+AGG | - | tig0025315:23130-23149 | Msa1421850:intron | 50.0% | |
| CCTTAATCGCGGTCCTGTTA+CGG | + | tig0025315:23146-23165 | None:intergenic | 50.0% | |
| AGCTGATGCAGCCTTAATCG+CGG | + | tig0025315:23157-23176 | None:intergenic | 50.0% | |
| CTCTTCCCGTTCACTGATAC+TGG | + | tig0025315:23344-23363 | None:intergenic | 50.0% | |
| AACGGGAAGAGACTTTCTCC+AGG | - | tig0025315:23353-23372 | Msa1421850:CDS | 50.0% | |
| GCTGAGCTGAATGAGATAGG+TGG | - | tig0025315:23386-23405 | Msa1421850:intron | 50.0% | |
| GGTCTTCAACCAAGTCGACA+CGG | + | tig0025315:23427-23446 | None:intergenic | 50.0% | |
| ATTGTAGGCATGAAGAGCCG+AGG | - | tig0025315:23449-23468 | Msa1421850:intron | 50.0% | |
| CGAGGAGTTTACGAAACTCC+AGG | - | tig0025315:23467-23486 | Msa1421850:intron | 50.0% | |
| GGAGTTTACGAAACTCCAGG+TGG | - | tig0025315:23470-23489 | Msa1421850:intron | 50.0% | |
| CTTCACTGCAGCAAGAGACT+TGG | - | tig0025315:23502-23521 | Msa1421850:intron | 50.0% | |
| TGATCCACTTCGCGAATCGA+TGG | - | tig0025315:23613-23632 | Msa1421850:intron | 50.0% | |
| !! | GAATCCATCGATTCGCGAAG+TGG | + | tig0025315:23620-23639 | None:intergenic | 50.0% |
| ! | TAGAGCACCTGCTGCATCAC+CGG | - | tig0025315:20521-20540 | Msa1421850:CDS | 55.0% |
| GTCGTGTCCAGTGTCTGTGT+TGG | + | tig0025315:20837-20856 | None:intergenic | 55.0% | |
| ! | ACACATCGGTTGTTGTCCCC+TGG | - | tig0025315:21122-21141 | Msa1421850:CDS | 55.0% |
| GACTAACTGAGAAGCTCCGC+TGG | + | tig0025315:21496-21515 | None:intergenic | 55.0% | |
| !! | AGTTGAGTGGGGTGGGTTAG+AGG | + | tig0025315:21804-21823 | None:intergenic | 55.0% |
| GCTGTCTCCCATGGTTGTAC+AGG | - | tig0025315:22444-22463 | Msa1421850:intron | 55.0% | |
| ! | CATGTTGACTGCAGACCCAG+AGG | - | tig0025315:22966-22985 | Msa1421850:intron | 55.0% |
| ! | GCTCGTTTGGAGCATCCTCT+GGG | + | tig0025315:22984-23003 | None:intergenic | 55.0% |
| GGTCCTGTTACGGTTAAGGC+TGG | + | tig0025315:23136-23155 | None:intergenic | 55.0% | |
| TCGCGGTCCTGTTACGGTTA+AGG | + | tig0025315:23140-23159 | None:intergenic | 55.0% | |
| CCGTAACAGGACCGCGATTA+AGG | - | tig0025315:23143-23162 | Msa1421850:intron | 55.0% | |
| !! | TGGAATAGGCCGTGTCGACT+TGG | - | tig0025315:23415-23434 | Msa1421850:intron | 55.0% |
| !! | GTGAAGAGAATGGTGCCACC+TGG | + | tig0025315:23488-23507 | None:intergenic | 55.0% |
| !! | GTAGTGCTTCTGTGACGGGT+CGG | - | tig0025315:23699-23718 | Msa1421850:intron | 55.0% |
| !! | AAGGCGTTGCCTGGCAGAAC+CGG | + | tig0025315:20543-20562 | None:intergenic | 60.0% |
| GTATTCCCTTGCCTGCGTGC+AGG | - | tig0025315:21552-21571 | Msa1421850:intron | 60.0% | |
| TTGCACCTGCACGCAGGCAA+GGG | + | tig0025315:21560-21579 | None:intergenic | 60.0% | |
| ATTGCACCTGCACGCAGGCA+AGG | + | tig0025315:21561-21580 | None:intergenic | 60.0% | |
| TCAGTAGCTGAGTCGGCCCA+AGG | - | tig0025315:21750-21769 | Msa1421850:intron | 60.0% | |
| CAGTAGCTGAGTCGGCCCAA+GGG | - | tig0025315:21751-21770 | Msa1421850:intron | 60.0% | |
| GGAGCTGATGCTGTCTCCCA+TGG | - | tig0025315:22435-22454 | Msa1421850:intron | 60.0% | |
| TTGTGGCTCCATGGAGGGAG+TGG | - | tig0025315:22617-22636 | Msa1421850:CDS | 60.0% | |
| TGTGGCTCCATGGAGGGAGT+GGG | - | tig0025315:22618-22637 | Msa1421850:CDS | 60.0% | |
| ! | GGCTCGTTTGGAGCATCCTC+TGG | + | tig0025315:22985-23004 | None:intergenic | 60.0% |
| GGCAGAACCGGTGATGCAGC+AGG | + | tig0025315:20531-20550 | None:intergenic | 65.0% | |
| !! | GCTGCATCACCGGTTCTGCC+AGG | - | tig0025315:20531-20550 | Msa1421850:CDS | 65.0% |
| CGGTTGTTGTCCCCTGGCTG+AGG | - | tig0025315:21128-21147 | Msa1421850:CDS | 65.0% | |
| GCTGAGTCGGCCCAAGGGTA+AGG | - | tig0025315:21756-21775 | Msa1421850:intron | 65.0% | |
| ! | AGATGGGCTTGGTCCCTGCC+TGG | + | tig0025315:21943-21962 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025315 | gene | 20161 | 23966 | 20161 | ID=Msa1421850;Name=Msa1421850 |
| tig0025315 | mRNA | 20161 | 23966 | 20161 | ID=Msa1421850-mRNA-1;Parent=Msa1421850;Name=Msa1421850-mRNA-1;_AED=0.25;_eAED=0.25;_QI=114|1|1|1|1|1|10|104|479 |
| tig0025315 | exon | 20161 | 20817 | 20161 | ID=Msa1421850-mRNA-1:exon:2334;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 21120 | 21208 | 21120 | ID=Msa1421850-mRNA-1:exon:2333;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 21371 | 21556 | 21371 | ID=Msa1421850-mRNA-1:exon:2332;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 21645 | 21719 | 21645 | ID=Msa1421850-mRNA-1:exon:2331;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 22492 | 22674 | 22492 | ID=Msa1421850-mRNA-1:exon:2330;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 22837 | 22885 | 22837 | ID=Msa1421850-mRNA-1:exon:2329;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 22978 | 23113 | 22978 | ID=Msa1421850-mRNA-1:exon:2328;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 23344 | 23386 | 23344 | ID=Msa1421850-mRNA-1:exon:2327;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 23551 | 23603 | 23551 | ID=Msa1421850-mRNA-1:exon:2326;Parent=Msa1421850-mRNA-1 |
| tig0025315 | exon | 23780 | 23966 | 23780 | ID=Msa1421850-mRNA-1:exon:2325;Parent=Msa1421850-mRNA-1 |
| tig0025315 | five_prime_UTR | 23853 | 23966 | 23853 | ID=Msa1421850-mRNA-1:five_prime_utr;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 23780 | 23852 | 23780 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 23551 | 23603 | 23551 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 23344 | 23386 | 23344 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 22978 | 23113 | 22978 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 22837 | 22885 | 22837 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 22492 | 22674 | 22492 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 21645 | 21719 | 21645 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 21371 | 21556 | 21371 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 21120 | 21208 | 21120 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | CDS | 20265 | 20817 | 20265 | ID=Msa1421850-mRNA-1:cds;Parent=Msa1421850-mRNA-1 |
| tig0025315 | three_prime_UTR | 20161 | 20264 | 20161 | ID=Msa1421850-mRNA-1:three_prime_utr;Parent=Msa1421850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
