AlfalfaGEDB | Msa1421890

M. sativa cultivar zhongmu-4 / Msa1421890

KEGG: K13448
GO: GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0010035 GO:0010193 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046677 GO:0046872 GO:0050896 GO:1901700
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1421890	sp\|Q9SRE6\|CML38_ARATH	45.652	138	75	0	2	139	40	177	1.13e-34	121

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1421890	G7J5J1	97.122	139	4	0	1	139	2	140	3.22e-91	270

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa1361250	Msa1421890	0.807908	4.017308e-50	-8.615850e-47
Msa1421890	Msa1421900	0.817045	4.041186e-52	-8.615850e-47
Msa0813260	Msa1421890	0.800610	1.329177e-48	-8.615850e-47
Msa0418410	Msa1421890	0.822069	2.884614e-53	-8.615850e-47
Msa0472720	Msa1421890	0.838230	3.254168e-57	-8.615850e-47
Msa0472760	Msa1421890	0.826116	3.235581e-54	-8.615850e-47
Msa0472770	Msa1421890	0.802371	5.791015e-49	-8.615850e-47
Msa0358110	Msa1421890	0.802538	5.348846e-49	-8.615850e-47
Msa0358120	Msa1421890	0.838815	2.297968e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1421890	MtrunA17_Chr3g0116151	97.122	139	4	0	1	139	2	140	6.20e-95	270
Msa1421890	MtrunA17_Chr3g0116141	97.122	139	4	0	1	139	1	139	7.54e-95	270
Msa1421890	MtrunA17_Chr4g0057641	72.993	137	37	0	3	139	4	140	7.71e-67	199
Msa1421890	MtrunA17_Chr4g0057651	74.436	133	34	0	6	138	7	139	9.80e-66	196
Msa1421890	MtrunA17_Chr4g0057661	72.794	136	37	0	3	138	4	139	3.00e-65	194
Msa1421890	MtrunA17_Chr6g0459231	56.204	137	60	0	2	138	5	141	6.06e-52	161
Msa1421890	MtrunA17_Chr7g0225921	52.174	138	65	1	2	138	3	140	2.67e-45	144
Msa1421890	MtrunA17_Chr8g0373691	46.667	135	71	1	5	138	53	187	4.37e-33	115
Msa1421890	MtrunA17_Chr3g0111371	39.695	131	76	1	9	139	9	136	9.03e-29	102
Msa1421890	MtrunA17_Chr8g0392951	38.060	134	83	0	6	139	25	158	9.68e-29	103
Msa1421890	MtrunA17_Chr5g0434951	39.394	132	76	2	9	138	8	137	6.13e-27	97.8
Msa1421890	MtrunA17_Chr7g0245911	39.583	144	77	4	6	139	48	191	1.24e-26	98.6
Msa1421890	MtrunA17_Chr1g0161211	38.806	134	81	1	6	138	47	180	8.43e-26	96.7
Msa1421890	MtrunA17_Chr1g0169581	38.346	133	79	1	9	138	8	140	9.78e-26	94.7
Msa1421890	MtrunA17_Chr8g0351681	37.063	143	81	3	6	139	50	192	8.88e-24	91.3
Msa1421890	MtrunA17_Chr7g0254731	34.532	139	80	2	6	138	13	146	1.12e-23	89.7
Msa1421890	MtrunA17_Chr8g0391691	37.692	130	80	1	6	134	37	166	2.26e-23	90.1
Msa1421890	MtrunA17_Chr4g0044961	36.154	130	82	1	9	138	61	189	9.15e-23	88.6
Msa1421890	MtrunA17_Chr4g0033601	36.429	140	80	3	6	139	6	142	9.52e-23	87.4
Msa1421890	MtrunA17_Chr1g0188171	35.252	139	79	2	6	138	13	146	1.12e-22	87.0
Msa1421890	MtrunA17_Chr6g0482731	36.364	132	83	1	9	139	30	161	2.09e-22	87.0
Msa1421890	MtrunA17_Chr5g0440931	33.813	139	81	2	6	138	13	146	2.48e-22	86.3
Msa1421890	MtrunA17_Chr6g0460211	33.813	139	81	2	6	138	13	146	2.51e-22	86.3
Msa1421890	MtrunA17_Chr3g0093271	34.043	141	82	2	4	138	62	197	9.41e-22	86.3
Msa1421890	MtrunA17_Chr5g0402331	33.835	133	87	1	7	138	50	182	3.49e-21	84.3
Msa1421890	MtrunA17_Chr1g0166281	35.433	127	81	1	13	138	20	146	3.56e-21	83.2
Msa1421890	MtrunA17_Chr1g0169621	30.380	158	82	2	9	138	8	165	1.25e-20	82.4
Msa1421890	MtrunA17_Chr5g0402361	33.835	133	87	1	7	138	222	354	3.98e-20	84.3
Msa1421890	MtrunA17_Chr5g0402361	33.582	134	85	2	7	138	50	181	3.11e-18	79.3
Msa1421890	MtrunA17_Chr7g0256171	34.074	135	86	2	8	139	8	142	1.32e-18	76.6
Msa1421890	MtrunA17_Chr8g0366401	32.090	134	79	2	9	134	21	150	5.05e-18	75.5
Msa1421890	MtrunA17_Chr1g0185001	30.370	135	94	0	4	138	11	145	6.92e-18	74.7
Msa1421890	MtrunA17_Chr4g0062221	33.835	133	85	2	9	138	15	147	2.53e-17	73.9
Msa1421890	MtrunA17_Chr7g0256701	34.307	137	84	3	8	138	76	212	6.84e-16	71.2
Msa1421890	MtrunA17_Chr4g0064231	33.553	152	78	5	9	139	68	217	1.57e-15	70.5
Msa1421890	MtrunA17_Chr5g0396261	34.234	111	70	1	30	137	2	112	2.57e-15	67.4
Msa1421890	MtrunA17_Chr7g0242561	33.333	126	84	0	14	139	370	495	3.92e-15	70.9
Msa1421890	MtrunA17_Chr7g0245371	32.857	140	81	2	13	139	32	171	5.60e-15	67.8
Msa1421890	MtrunA17_Chr7g0274101	32.836	134	89	1	6	138	13	146	7.50e-15	67.0
Msa1421890	MtrunA17_Chr8g0368681	30.075	133	90	2	9	138	16	148	1.06e-14	67.0
Msa1421890	MtrunA17_Chr2g0329371	34.058	138	86	2	7	139	66	203	1.79e-14	67.4
Msa1421890	MtrunA17_Chr6g0450921	32.812	128	85	1	13	139	37	164	3.33e-14	65.9
Msa1421890	MtrunA17_Chr5g0397101	31.387	137	89	2	5	139	371	504	5.10e-14	67.8
Msa1421890	MtrunA17_Chr8g0387671	30.657	137	90	2	5	139	371	504	7.44e-14	67.4
Msa1421890	MtrunA17_Chr3g0121191	32.331	133	79	4	7	138	95	217	9.59e-14	65.5
Msa1421890	MtrunA17_Chr7g0245231	32.031	128	86	1	13	139	38	165	1.60e-13	63.9
Msa1421890	MtrunA17_Chr1g0173541	30.147	136	95	0	4	139	356	491	5.52e-13	64.7
Msa1421890	MtrunA17_Chr7g0257751	30.714	140	89	2	4	139	362	497	7.18e-13	64.3
Msa1421890	MtrunA17_Chr5g0444171	29.927	137	91	2	5	139	397	530	1.14e-12	63.9
Msa1421890	MtrunA17_Chr5g0441691	27.941	136	93	2	5	138	373	505	1.49e-12	63.5
Msa1421890	MtrunA17_Chr0c02g0489761	27.737	137	94	2	5	139	383	516	1.83e-12	63.2
Msa1421890	MtrunA17_Chr4g0059951	28.346	127	89	2	14	139	387	512	3.67e-12	62.4
Msa1421890	MtrunA17_Chr1g0157131	27.007	137	95	2	5	139	379	512	1.12e-11	60.8
Msa1421890	MtrunA17_Chr4g0033371	31.159	138	88	3	5	139	377	510	1.27e-11	60.8
Msa1421890	MtrunA17_Chr3g0131181	28.467	137	94	2	4	139	333	466	1.95e-11	60.5
Msa1421890	MtrunA17_Chr3g0098951	27.660	141	96	2	5	139	388	528	4.23e-11	59.3
Msa1421890	MtrunA17_Chr5g0409441	27.559	127	91	1	9	134	26	152	5.63e-11	57.0
Msa1421890	MtrunA17_Chr4g0042491	32.283	127	75	3	22	139	52	176	8.37e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1421890	AT1G76650.1	45.652	138	75	0	2	139	40	177	1.15e-35	121
Msa1421890	AT1G76650.3	45.652	138	75	0	2	139	40	177	1.15e-35	121
Msa1421890	AT1G76640.1	46.154	143	70	3	2	139	19	159	3.62e-34	117
Msa1421890	AT5G42380.1	44.361	133	72	1	9	139	53	185	1.49e-32	114
Msa1421890	AT1G76650.2	44.203	138	67	1	2	139	40	167	1.86e-32	113
Msa1421890	AT3G50770.1	45.255	137	69	2	8	138	67	203	4.27e-32	113
Msa1421890	AT5G37770.1	37.410	139	82	1	6	139	18	156	1.54e-26	97.8
Msa1421890	AT5G37770.2	37.410	139	82	1	6	139	18	156	1.54e-26	97.8
Msa1421890	AT1G24620.1	39.552	134	80	1	6	138	38	171	5.05e-26	97.1
Msa1421890	AT3G01830.1	40.146	137	77	2	6	139	12	146	1.55e-25	94.7
Msa1421890	AT1G18210.2	37.692	130	78	1	9	138	27	153	2.99e-24	92.0
Msa1421890	AT1G18210.1	37.692	130	78	1	9	138	27	153	2.99e-24	92.0
Msa1421890	AT1G66400.1	34.586	133	84	1	9	138	19	151	5.83e-24	90.9
Msa1421890	AT1G73630.1	34.351	131	83	1	9	139	24	151	1.54e-23	90.1
Msa1421890	AT5G21274.1	34.532	139	80	2	6	138	13	146	1.70e-22	87.0
Msa1421890	AT2G15680.1	37.594	133	80	2	8	139	53	183	1.78e-22	88.2
Msa1421890	AT1G66410.1	33.813	139	81	2	6	138	13	146	2.04e-22	87.0
Msa1421890	AT5G37780.1	33.813	139	81	2	6	138	13	146	2.04e-22	87.0
Msa1421890	AT3G43810.1	33.813	139	81	2	6	138	13	146	3.46e-22	86.3
Msa1421890	AT5G17470.1	35.075	134	84	1	9	139	6	139	6.82e-22	85.5
Msa1421890	AT3G22930.1	33.582	134	88	1	6	138	36	169	1.18e-21	85.5
Msa1421890	AT3G56800.1	33.094	139	82	2	6	138	13	146	1.30e-21	84.7
Msa1421890	AT2G41110.1	33.094	139	82	2	6	138	13	146	1.30e-21	84.7
Msa1421890	AT2G27030.1	33.094	139	82	2	6	138	13	146	1.30e-21	84.7
Msa1421890	AT3G43810.2	33.813	139	81	2	6	138	13	146	2.05e-21	85.9
Msa1421890	AT1G05990.1	36.232	138	84	2	6	139	6	143	3.00e-21	84.0
Msa1421890	AT2G27030.3	33.094	139	82	2	6	138	13	146	3.26e-21	84.7
Msa1421890	AT3G07490.1	35.915	142	88	2	1	139	1	142	1.08e-20	82.4
Msa1421890	AT4G14640.1	32.836	134	89	1	6	138	14	147	1.80e-20	82.0
Msa1421890	AT4G03290.1	34.694	147	86	4	1	139	1	145	5.08e-20	80.9
Msa1421890	AT2G43290.1	32.168	143	87	3	6	139	66	207	2.53e-19	80.5
Msa1421890	AT2G41110.2	31.126	151	81	3	6	138	13	158	5.57e-19	78.2
Msa1421890	AT3G59440.1	32.593	135	89	1	7	139	53	187	8.54e-19	78.6
Msa1421890	AT3G50360.1	35.156	128	82	1	13	139	35	162	1.21e-18	77.8
Msa1421890	AT5G37780.2	30.519	154	81	3	6	138	13	161	2.64e-18	76.6
Msa1421890	AT3G10190.1	34.586	133	85	2	8	138	73	205	3.97e-18	77.4
Msa1421890	AT5G37780.4	32.540	126	74	2	19	138	13	133	2.40e-17	73.6
Msa1421890	AT2G41100.7	29.139	151	89	2	6	138	67	217	2.58e-17	76.3
Msa1421890	AT2G41100.6	29.139	151	89	2	6	138	67	217	2.58e-17	76.3
Msa1421890	AT2G41100.3	29.139	151	89	2	6	138	67	217	2.58e-17	76.3
Msa1421890	AT4G12860.1	34.074	135	86	2	8	139	8	142	2.66e-17	73.9
Msa1421890	AT1G66410.2	32.540	126	74	2	19	138	36	156	3.35e-17	73.6
Msa1421890	AT2G41100.4	29.139	151	89	2	6	138	102	252	3.72e-17	76.3
Msa1421890	AT2G41100.4	26.667	150	93	2	6	138	13	162	9.76e-15	69.7
Msa1421890	AT2G41100.1	29.139	151	89	2	6	138	102	252	3.72e-17	76.3
Msa1421890	AT2G41100.1	26.667	150	93	2	6	138	13	162	9.76e-15	69.7
Msa1421890	AT5G37780.3	32.540	126	74	2	19	138	52	172	4.55e-17	73.6
Msa1421890	AT2G36180.1	31.111	135	89	2	9	139	4	138	7.67e-17	72.4
Msa1421890	AT1G66410.4	33.043	115	66	2	30	138	1	110	2.04e-16	70.5
Msa1421890	AT1G66410.3	33.043	115	66	2	30	138	1	110	2.04e-16	70.5
Msa1421890	AT3G43810.4	33.043	115	66	2	30	138	1	110	3.34e-16	70.1
Msa1421890	AT3G43810.3	33.043	115	66	2	30	138	1	110	3.34e-16	70.1
Msa1421890	AT4G14640.2	31.405	121	82	1	19	138	9	129	4.05e-16	70.1
Msa1421890	AT1G18530.1	31.783	129	85	1	13	138	15	143	9.42e-16	69.7
Msa1421890	AT3G03400.1	29.927	137	87	4	1	131	1	134	3.50e-15	67.8
Msa1421890	AT3G51850.1	34.921	126	82	0	14	139	368	493	4.49e-15	71.2
Msa1421890	AT4G37010.2	28.788	132	93	1	9	139	35	166	1.63e-14	67.0
Msa1421890	AT4G37010.1	28.788	132	93	1	9	139	31	162	1.71e-14	67.0
Msa1421890	AT3G51920.1	29.851	134	93	1	6	138	13	146	3.00e-14	65.9
Msa1421890	AT4G23650.1	32.847	137	87	2	5	139	383	516	4.20e-14	68.6
Msa1421890	AT5G12180.1	30.370	135	93	1	5	139	378	511	1.20e-13	67.0
Msa1421890	AT1G32250.1	29.197	137	82	2	9	134	20	152	1.60e-13	64.3
Msa1421890	AT5G19360.1	29.630	135	94	1	5	139	373	506	2.23e-13	66.2
Msa1421890	AT2G41090.1	27.068	133	95	1	6	138	13	143	2.44e-13	64.3
Msa1421890	AT1G74740.1	33.077	130	79	3	14	139	373	498	2.47e-13	66.2
Msa1421890	AT1G76040.1	29.927	137	91	2	5	139	178	311	2.95e-13	65.5
Msa1421890	AT1G76040.4	29.927	137	91	2	5	139	178	311	2.95e-13	65.5
Msa1421890	AT1G76040.2	29.927	137	91	2	5	139	416	549	3.05e-13	65.9
Msa1421890	AT5G12480.2	29.197	137	96	1	4	139	269	405	4.87e-13	65.1
Msa1421890	AT5G12480.1	29.197	137	96	1	4	139	363	499	5.40e-13	65.1
Msa1421890	AT3G10660.2	31.655	139	87	4	4	139	490	623	1.41e-12	63.9
Msa1421890	AT3G10660.1	31.655	139	87	4	4	139	490	623	1.41e-12	63.9
Msa1421890	AT3G57530.1	31.429	140	87	4	4	139	367	501	1.43e-12	63.9
Msa1421890	AT2G31500.1	32.374	139	91	2	4	139	370	508	2.86e-12	63.2
Msa1421890	AT2G41410.1	31.111	135	89	3	8	138	73	207	3.77e-12	61.6
Msa1421890	AT3G25600.1	29.323	133	91	2	9	138	16	148	1.26e-11	59.3
Msa1421890	AT2G41100.2	31.481	108	56	2	49	138	20	127	1.53e-11	59.7
Msa1421890	AT3G03000.1	28.788	132	92	1	9	138	24	155	1.97e-11	58.5
Msa1421890	AT4G04695.1	28.148	135	96	1	5	139	336	469	2.16e-11	60.5
Msa1421890	AT2G41860.1	29.231	130	92	0	10	139	364	493	2.31e-11	60.5
Msa1421890	AT2G41860.2	29.231	130	92	0	10	139	364	493	2.35e-11	60.5
Msa1421890	AT5G23580.1	27.941	136	94	2	5	139	327	459	2.73e-11	60.5
Msa1421890	AT1G18890.1	28.148	135	95	2	6	139	369	502	4.06e-11	59.7
Msa1421890	AT5G04870.1	30.216	139	89	4	4	139	454	587	5.47e-11	59.3

Find 22 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCATCCTCTTCAAACTCTT+TGG	0.279285	tig0025315:-56357	None:intergenic
GGAGGAATTAATTGCTTTGA+TGG	0.320451	tig0025315:+56251	Msa1421890:CDS
TGGTGATGGTTATTTGAGTT+TGG	0.333482	tig0025315:+56230	Msa1421890:CDS
TTTGTTGAAAGAAGCTGAAA+TGG	0.376240	tig0025315:+56185	Msa1421890:CDS
AGCCTCTGTCTTAGCTCTGC+TGG	0.386134	tig0025315:-56141	None:intergenic
GAAGAGGATGCTTAAGAAGA+TGG	0.388089	tig0025315:+56368	Msa1421890:CDS
AGACAGAGGCTAAGAGTAAT+GGG	0.414746	tig0025315:+56153	Msa1421890:CDS
TTAATTGCTTTGATGGAGGA+AGG	0.458662	tig0025315:+56258	Msa1421890:CDS
TGGAGAAGAACAAAAGTTGA+AGG	0.479397	tig0025315:+56281	Msa1421890:CDS
AAGAGGATGCTTAAGAAGAT+GGG	0.484014	tig0025315:+56369	Msa1421890:CDS
AAGACAGAGGCTAAGAGTAA+TGG	0.500258	tig0025315:+56152	Msa1421890:CDS
ATTGCTTTGATGGAGGAAGG+TGG	0.541567	tig0025315:+56261	Msa1421890:CDS
TAAAACCAAAGAGTTTGAAG+AGG	0.562103	tig0025315:+56352	Msa1421890:CDS
TGATGGTTATTTGAGTTTGG+AGG	0.566788	tig0025315:+56233	Msa1421890:CDS
GGAATTAATTGCTTTGATGG+AGG	0.567051	tig0025315:+56254	Msa1421890:CDS
CACCAGCAGAGCTAAGACAG+AGG	0.625620	tig0025315:+56139	Msa1421890:CDS
TGAAATGGCTATTGAAGCAG+TGG	0.626317	tig0025315:+56200	Msa1421890:CDS
ATTGAAGCAGTGGATTCAGA+TGG	0.638749	tig0025315:+56210	Msa1421890:CDS
TGAGAGATGATGAAGAACGC+GGG	0.672274	tig0025315:+56066	None:intergenic
GTGAGAGATGATGAAGAACG+CGG	0.689928	tig0025315:+56065	None:intergenic
GCAGTGGATTCAGATGGTGA+TGG	0.712163	tig0025315:+56216	Msa1421890:CDS
ATGTATGATAGTGAGAAGTG+TGG	0.719192	tig0025315:+56324	Msa1421890:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATGATTAGACATTTTGATT+TGG	+	tig0025315:56422-56441	Msa1421890:CDS	20.0%
!!!	CTTAGATATTTTGATGAAGA+TGG	+	tig0025315:56102-56121	Msa1421890:CDS	25.0%
!!!	ATTAGACATTTTGATTTGGA+TGG	+	tig0025315:56426-56445	Msa1421890:CDS	25.0%
!!!	TTAGACATTTTGATTTGGAT+GGG	+	tig0025315:56427-56446	Msa1421890:CDS	25.0%
!!!	TATTTTGATGAAGATGGTGA+TGG	+	tig0025315:56108-56127	Msa1421890:CDS	30.0%
	TTTGTTGAAAGAAGCTGAAA+TGG	+	tig0025315:56185-56204	Msa1421890:CDS	30.0%
	TAAAACCAAAGAGTTTGAAG+AGG	+	tig0025315:56352-56371	Msa1421890:CDS	30.0%
!!!	TAGACATTTTGATTTGGATG+GGG	+	tig0025315:56428-56447	Msa1421890:CDS	30.0%
!!	TGGTGATGGTTATTTGAGTT+TGG	+	tig0025315:56230-56249	Msa1421890:CDS	35.0%
!	TGATGGTTATTTGAGTTTGG+AGG	+	tig0025315:56233-56252	Msa1421890:CDS	35.0%
	GGAGGAATTAATTGCTTTGA+TGG	+	tig0025315:56251-56270	Msa1421890:CDS	35.0%
	GGAATTAATTGCTTTGATGG+AGG	+	tig0025315:56254-56273	Msa1421890:CDS	35.0%
	TTAATTGCTTTGATGGAGGA+AGG	+	tig0025315:56258-56277	Msa1421890:CDS	35.0%
	TGGAGAAGAACAAAAGTTGA+AGG	+	tig0025315:56281-56300	Msa1421890:CDS	35.0%
!	ATGTATGATAGTGAGAAGTG+TGG	+	tig0025315:56324-56343	Msa1421890:CDS	35.0%
	AAGAGGATGCTTAAGAAGAT+GGG	+	tig0025315:56369-56388	Msa1421890:CDS	35.0%
	AAGACAGAGGCTAAGAGTAA+TGG	+	tig0025315:56152-56171	Msa1421890:CDS	40.0%
	AGACAGAGGCTAAGAGTAAT+GGG	+	tig0025315:56153-56172	Msa1421890:CDS	40.0%
	TGAAATGGCTATTGAAGCAG+TGG	+	tig0025315:56200-56219	Msa1421890:CDS	40.0%
!	ATTGAAGCAGTGGATTCAGA+TGG	+	tig0025315:56210-56229	Msa1421890:CDS	40.0%
	AGCATCCTCTTCAAACTCTT+TGG	-	tig0025315:56360-56379	None:intergenic	40.0%
	GAAGAGGATGCTTAAGAAGA+TGG	+	tig0025315:56368-56387	Msa1421890:CDS	40.0%
!!!	CATTTTGATTTGGATGGGGA+TGG	+	tig0025315:56432-56451	Msa1421890:CDS	40.0%
	ATTGCTTTGATGGAGGAAGG+TGG	+	tig0025315:56261-56280	Msa1421890:CDS	45.0%
!	GCAGTGGATTCAGATGGTGA+TGG	+	tig0025315:56216-56235	Msa1421890:CDS	50.0%
	CACCAGCAGAGCTAAGACAG+AGG	+	tig0025315:56139-56158	Msa1421890:CDS	55.0%
!!	AGCCTCTGTCTTAGCTCTGC+TGG	-	tig0025315:56144-56163	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
tig0025315	gene	56075	56494	56075	ID=Msa1421890;Name=Msa1421890
tig0025315	mRNA	56075	56494	56075	ID=Msa1421890-mRNA-1;Parent=Msa1421890;Name=Msa1421890-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|139
tig0025315	exon	56075	56494	56075	ID=Msa1421890-mRNA-1:exon:2300;Parent=Msa1421890-mRNA-1
tig0025315	CDS	56075	56494	56075	ID=Msa1421890-mRNA-1:cds;Parent=Msa1421890-mRNA-1

Gene Sequence

>Msa1421890

ATGAAGAACGCGGGATTTGAACATGTTCTTAGATATTTTGATGAAGATGGTGATGGAAAAGTTTCACCAGCAGAGCTAAGACAGAGGCTAAGAGTAATGGGAGAAGAGATTTTGTTGAAAGAAGCTGAAATGGCTATTGAAGCAGTGGATTCAGATGGTGATGGTTATTTGAGTTTGGAGGAATTAATTGCTTTGATGGAGGAAGGTGGAGAAGAACAAAAGTTGAAGGATTTGAGAGAAGCATTTGAGATGTATGATAGTGAGAAGTGTGGTTTTATAAAACCAAAGAGTTTGAAGAGGATGCTTAAGAAGATGGGTGAGTCTAAGTCTATTGATGAATGTAAAGCTATGATTAGACATTTTGATTTGGATGGGGATGGTTTGCTTAGCTTTGATGAATTCATAACAATGATGCAGTGA

Protein sequence

>Msa1421890

MKNAGFEHVLRYFDEDGDGKVSPAELRQRLRVMGEEILLKEAEMAIEAVDSDGDGYLSLEELIALMEEGGEEQKLKDLREAFEMYDSEKCGFIKPKSLKRMLKKMGESKSIDECKAMIRHFDLDGDGLLSFDEFITMMQ*