AlfalfaGEDB | Msa0472770

M. sativa cultivar zhongmu-4 / Msa0472770

KEGG: K13448
GO: GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0010035 GO:0010193 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046677 GO:0046872 GO:0050896 GO:1901700
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472770	XP_024635986.2	94.964	139	7	0	1	139	1	139	1.04e-88	264

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472770	sp\|Q9SRE6\|CML38_ARATH	47.826	138	72	0	2	139	40	177	1.39e-37	129

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472770	G7J5J2	94.964	139	7	0	1	139	1	139	4.95e-89	264

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003630	Msa0472770	0.821786	3.355385e-53	-8.615850e-47
Msa0004480	Msa0472770	0.824028	1.007475e-53	-8.615850e-47
Msa0012100	Msa0472770	0.819263	1.273069e-52	-8.615850e-47
Msa0017320	Msa0472770	0.842071	3.235005e-58	-8.615850e-47
Msa0020390	Msa0472770	0.800804	1.213871e-48	-8.615850e-47
Msa0030480	Msa0472770	0.830804	2.389581e-55	-8.615850e-47
Msa0030530	Msa0472770	0.813045	3.122881e-51	-8.615850e-47
Msa0036540	Msa0472770	0.803895	2.801736e-49	-8.615850e-47
Msa0041690	Msa0472770	0.800353	1.500158e-48	-8.615850e-47
Msa0045550	Msa0472770	0.809095	2.241786e-50	-8.615850e-47
Msa0046560	Msa0472770	0.803791	2.945717e-49	-8.615850e-47
Msa0058310	Msa0472770	0.811231	7.765782e-51	-8.615850e-47
Msa0060070	Msa0472770	0.817831	2.688449e-52	-8.615850e-47
Msa0061500	Msa0472770	0.807923	3.986357e-50	-8.615850e-47
Msa0065650	Msa0472770	0.808734	2.677909e-50	-8.615850e-47
Msa0071480	Msa0472770	0.859148	5.054460e-63	-8.615850e-47
Msa0079230	Msa0472770	0.800955	1.130280e-48	-8.615850e-47
Msa0081650	Msa0472770	0.812945	3.283509e-51	-8.615850e-47
Msa0081940	Msa0472770	0.862414	5.155701e-64	-8.615850e-47
Msa0082050	Msa0472770	0.841253	5.314398e-58	-8.615850e-47
Msa0090510	Msa0472770	0.820536	6.513337e-53	-8.615850e-47
Msa0090550	Msa0472770	0.811270	7.613520e-51	-8.615850e-47
Msa0092410	Msa0472770	0.801473	8.858302e-49	-8.615850e-47
Msa0103250	Msa0472770	0.803529	3.338398e-49	-8.615850e-47
Msa0105520	Msa0472770	0.804520	2.076693e-49	-8.615850e-47
Msa0105750	Msa0472770	0.801658	8.114458e-49	-8.615850e-47
Msa0106620	Msa0472770	0.808930	2.430683e-50	-8.615850e-47
Msa0106710	Msa0472770	0.805024	1.629557e-49	-8.615850e-47
Msa0111080	Msa0472770	0.817312	3.520218e-52	-8.615850e-47
Msa0118540	Msa0472770	0.803004	4.287293e-49	-8.615850e-47
Msa0119440	Msa0472770	0.886253	4.016027e-72	-8.615850e-47
Msa0126880	Msa0472770	0.830955	2.193378e-55	-8.615850e-47
Msa0128430	Msa0472770	0.863163	3.029102e-64	-8.615850e-47
Msa0136630	Msa0472770	0.840326	9.300639e-58	-8.615850e-47
Msa0137510	Msa0472770	0.823766	1.160899e-53	-8.615850e-47
Msa0138640	Msa0472770	0.812963	3.254153e-51	-8.615850e-47
Msa0138900	Msa0472770	0.803909	2.782787e-49	-8.615850e-47
Msa0139670	Msa0472770	0.840206	9.998993e-58	-8.615850e-47
Msa0142500	Msa0472770	0.814298	1.654614e-51	-8.615850e-47
Msa0145740	Msa0472770	0.807548	4.789501e-50	-8.615850e-47
Msa0152560	Msa0472770	0.827507	1.506130e-54	-8.615850e-47
Msa0154920	Msa0472770	0.813916	2.009071e-51	-8.615850e-47
Msa0162690	Msa0472770	0.845825	3.188808e-59	-8.615850e-47
Msa0171980	Msa0472770	0.835528	1.592096e-56	-8.615850e-47
Msa0183870	Msa0472770	0.815961	7.068262e-52	-8.615850e-47
Msa0183910	Msa0472770	0.824903	6.271651e-54	-8.615850e-47
Msa0187310	Msa0472770	0.828862	7.098917e-55	-8.615850e-47
Msa0187490	Msa0472770	0.803665	3.128206e-49	-8.615850e-47
Msa0187830	Msa0472770	0.804160	2.467857e-49	-8.615850e-47
Msa0192640	Msa0472770	0.843355	1.474443e-58	-8.615850e-47
Msa0194010	Msa0472770	0.813008	3.180393e-51	-8.615850e-47
Msa0197530	Msa0472770	0.814779	1.294758e-51	-8.615850e-47
Msa0201570	Msa0472770	0.807252	5.535599e-50	-8.615850e-47
Msa0202930	Msa0472770	0.814605	1.415110e-51	-8.615850e-47
Msa0213430	Msa0472770	0.854154	1.486679e-61	-8.615850e-47
Msa0220730	Msa0472770	0.810450	1.146016e-50	-8.615850e-47
Msa0233370	Msa0472770	0.815912	7.249121e-52	-8.615850e-47
Msa0235880	Msa0472770	0.820393	7.022311e-53	-8.615850e-47
Msa0236070	Msa0472770	0.807872	4.088115e-50	-8.615850e-47
Msa0364790	Msa0472770	0.848138	7.420023e-60	-8.615850e-47
Msa0380600	Msa0472770	0.846094	2.694888e-59	-8.615850e-47
Msa0382310	Msa0472770	0.813088	3.054756e-51	-8.615850e-47
Msa0382370	Msa0472770	0.842639	2.287317e-58	-8.615850e-47
Msa0403490	Msa0472770	0.853613	2.128057e-61	-8.615850e-47
Msa0403770	Msa0472770	0.825394	4.800958e-54	-8.615850e-47
Msa0418400	Msa0472770	0.963392	4.983122e-122	-8.615850e-47
Msa0418410	Msa0472770	0.841481	4.628263e-58	-8.615850e-47
Msa0422180	Msa0472770	0.809424	1.905239e-50	-8.615850e-47
Msa0427580	Msa0472770	0.819259	1.275957e-52	-8.615850e-47
Msa0430240	Msa0472770	0.844430	7.597814e-59	-8.615850e-47
Msa0431210	Msa0472770	0.805194	1.501965e-49	-8.615850e-47
Msa0432160	Msa0472770	0.827605	1.426165e-54	-8.615850e-47
Msa0437070	Msa0472770	0.842197	2.994595e-58	-8.615850e-47
Msa0472710	Msa0472770	0.944882	8.596081e-104	-8.615850e-47
Msa0472720	Msa0472770	0.906514	1.367277e-80	-8.615850e-47
Msa0472760	Msa0472770	0.857542	1.520148e-62	-8.615850e-47
Msa0472770	Msa0476680	0.822094	2.846847e-53	-8.615850e-47
Msa0472770	Msa0481970	0.806500	7.979914e-50	-8.615850e-47
Msa0472770	Msa0482180	0.819283	1.259821e-52	-8.615850e-47
Msa0472770	Msa0482940	0.851355	9.365973e-61	-8.615850e-47
Msa0472770	Msa0491000	0.801268	9.757310e-49	-8.615850e-47
Msa0472770	Msa0500400	0.817178	3.773319e-52	-8.615850e-47
Msa0472770	Msa0514610	0.828324	9.578475e-55	-8.615850e-47
Msa0472770	Msa0518170	0.825648	4.180924e-54	-8.615850e-47
Msa0472770	Msa0520270	0.812266	4.621684e-51	-8.615850e-47
Msa0472770	Msa0521010	0.825895	3.651607e-54	-8.615850e-47
Msa0472770	Msa0534870	0.803765	2.981653e-49	-8.615850e-47
Msa0472770	Msa0536160	0.805307	1.422207e-49	-8.615850e-47
Msa0472770	Msa0538160	0.817441	3.292934e-52	-8.615850e-47
Msa0472770	Msa0542470	0.800176	1.629803e-48	-8.615850e-47
Msa0472770	Msa0566350	0.800522	1.385271e-48	-8.615850e-47
Msa0472770	Msa0566750	0.801254	9.822124e-49	-8.615850e-47
Msa0472770	Msa0569780	0.852284	5.105813e-61	-8.615850e-47
Msa0472770	Msa0581970	0.801006	1.103767e-48	-8.615850e-47
Msa0472770	Msa0583670	0.859240	4.742673e-63	-8.615850e-47
Msa0472770	Msa0587540	0.809771	1.604544e-50	-8.615850e-47
Msa0472770	Msa0613340	0.808337	3.255248e-50	-8.615850e-47
Msa0472770	Msa0615680	0.814233	1.710166e-51	-8.615850e-47
Msa0472770	Msa0616450	0.819722	1.000420e-52	-8.615850e-47
Msa0472770	Msa0617170	0.807967	3.902865e-50	-8.615850e-47
Msa0472770	Msa0631320	0.800594	1.339778e-48	-8.615850e-47
Msa0472770	Msa0641340	0.814689	1.355417e-51	-8.615850e-47
Msa0472770	Msa0655920	0.808697	2.726784e-50	-8.615850e-47
Msa0472770	Msa0658680	0.824698	7.008563e-54	-8.615850e-47
Msa0472770	Msa0659790	0.831316	1.788894e-55	-8.615850e-47
Msa0472770	Msa0665520	0.801663	8.096369e-49	-8.615850e-47
Msa0472770	Msa0679360	0.803460	3.448846e-49	-8.615850e-47
Msa0472770	Msa0689780	0.803631	3.179028e-49	-8.615850e-47
Msa0472770	Msa0694190	0.802687	4.984349e-49	-8.615850e-47
Msa0472770	Msa0701100	0.820366	7.123313e-53	-8.615850e-47
Msa0472770	Msa0703440	0.813408	2.598572e-51	-8.615850e-47
Msa0472770	Msa0705990	0.842521	2.457760e-58	-8.615850e-47
Msa0472770	Msa0709120	0.837650	4.587462e-57	-8.615850e-47
Msa0472770	Msa0721340	0.820139	8.032928e-53	-8.615850e-47
Msa0472770	Msa0724370	0.860436	2.068419e-63	-8.615850e-47
Msa0472770	Msa0732600	0.818589	1.811965e-52	-8.615850e-47
Msa0472770	Msa0735550	0.824491	7.842119e-54	-8.615850e-47
Msa0472770	Msa0742150	0.823697	1.205000e-53	-8.615850e-47
Msa0472770	Msa0743530	0.809671	1.686602e-50	-8.615850e-47
Msa0472770	Msa0743870	0.801165	1.023899e-48	-8.615850e-47
Msa0472770	Msa0746170	0.819056	1.419242e-52	-8.615850e-47
Msa0472770	Msa0746210	0.814351	1.610669e-51	-8.615850e-47
Msa0472770	Msa0748660	0.887872	9.735007e-73	-8.615850e-47
Msa0472770	Msa0748920	0.803997	2.668418e-49	-8.615850e-47
Msa0472770	Msa0758250	0.826977	2.017781e-54	-8.615850e-47
Msa0472770	Msa0764920	0.880922	3.680209e-70	-8.615850e-47
Msa0472770	Msa0769720	0.810619	1.053474e-50	-8.615850e-47
Msa0472770	Msa0775560	0.829175	5.961041e-55	-8.615850e-47
Msa0472770	Msa0775920	0.818786	1.634741e-52	-8.615850e-47
Msa0472770	Msa0776750	0.805289	1.434613e-49	-8.615850e-47
Msa0472770	Msa0779260	0.834759	2.489340e-56	-8.615850e-47
Msa0472770	Msa0786070	0.830211	3.336153e-55	-8.615850e-47
Msa0472770	Msa0789560	0.803135	4.028375e-49	-8.615850e-47
Msa0472770	Msa0811040	0.806407	8.351091e-50	-8.615850e-47
Msa0472770	Msa0812950	0.822939	1.811037e-53	-8.615850e-47
Msa0472770	Msa0813260	0.869990	2.045222e-66	-8.615850e-47
Msa0472770	Msa0818770	0.802133	6.481273e-49	-8.615850e-47
Msa0472770	Msa0823440	0.816980	4.179876e-52	-8.615850e-47
Msa0472770	Msa0826150	0.805538	1.271734e-49	-8.615850e-47
Msa0472770	Msa0844610	0.859978	2.844342e-63	-8.615850e-47
Msa0472770	Msa0847470	0.804266	2.346316e-49	-8.615850e-47
Msa0472770	Msa0853440	0.800169	1.634506e-48	-8.615850e-47
Msa0472770	Msa0853810	0.859331	4.454679e-63	-8.615850e-47
Msa0472770	Msa0855110	0.811075	8.391109e-51	-8.615850e-47
Msa0472770	Msa0857300	0.828967	6.696884e-55	-8.615850e-47
Msa0472770	Msa0860250	0.813119	3.007825e-51	-8.615850e-47
Msa0472770	Msa0863720	0.805304	1.424132e-49	-8.615850e-47
Msa0472770	Msa0865970	0.802837	4.642506e-49	-8.615850e-47
Msa0472770	Msa0877710	0.811323	7.414534e-51	-8.615850e-47
Msa0472770	Msa0901110	0.814579	1.434008e-51	-8.615850e-47
Msa0472770	Msa0903780	0.804851	1.771437e-49	-8.615850e-47
Msa0472770	Msa0964960	0.807027	6.176648e-50	-8.615850e-47
Msa0472770	Msa0968050	0.839768	1.300468e-57	-8.615850e-47
Msa0472770	Msa0973070	0.826156	3.165520e-54	-8.615850e-47
Msa0472770	Msa0974950	0.821158	4.683760e-53	-8.615850e-47
Msa0472770	Msa0980020	0.805290	1.433730e-49	-8.615850e-47
Msa0472770	Msa0994370	0.819876	9.226012e-53	-8.615850e-47
Msa0472770	Msa1011090	0.802055	6.726865e-49	-8.615850e-47
Msa0472770	Msa1024680	0.822414	2.399685e-53	-8.615850e-47
Msa0472770	Msa1034700	0.837860	4.050099e-57	-8.615850e-47
Msa0472770	Msa1042660	0.838368	2.997771e-57	-8.615850e-47
Msa0472770	Msa1063370	0.807077	6.029218e-50	-8.615850e-47
Msa0472770	Msa1063420	0.842505	2.482670e-58	-8.615850e-47
Msa0472770	Msa1074540	0.833261	5.902148e-56	-8.615850e-47
Msa0472770	Msa1078330	0.812060	5.126912e-51	-8.615850e-47
Msa0472770	Msa1089270	0.806404	8.364284e-50	-8.615850e-47
Msa0472770	Msa1093100	0.824003	1.021490e-53	-8.615850e-47
Msa0472770	Msa1108710	0.804283	2.326791e-49	-8.615850e-47
Msa0472770	Msa1108720	0.834373	3.111123e-56	-8.615850e-47
Msa0472770	Msa1109810	0.804766	1.845017e-49	-8.615850e-47
Msa0472770	Msa1115280	0.805912	1.061764e-49	-8.615850e-47
Msa0472770	Msa1123720	0.833036	6.713987e-56	-8.615850e-47
Msa0472770	Msa1127430	0.824532	7.670501e-54	-8.615850e-47
Msa0472770	Msa1143020	0.809276	2.049883e-50	-8.615850e-47
Msa0472770	Msa1152410	0.831522	1.591264e-55	-8.615850e-47
Msa0472770	Msa1156820	0.809649	1.704282e-50	-8.615850e-47
Msa0472770	Msa1158230	0.801589	8.382937e-49	-8.615850e-47
Msa0472770	Msa1158770	0.801460	8.909416e-49	-8.615850e-47
Msa0472770	Msa1163880	0.835572	1.552266e-56	-8.615850e-47
Msa0472770	Msa1164020	0.805012	1.639611e-49	-8.615850e-47
Msa0472770	Msa1183140	0.800881	1.170440e-48	-8.615850e-47
Msa0472770	Msa1184780	0.840139	1.040672e-57	-8.615850e-47
Msa0472770	Msa1197070	0.820845	5.531358e-53	-8.615850e-47
Msa0472770	Msa1200320	0.807692	4.465302e-50	-8.615850e-47
Msa0472770	Msa1206650	0.825120	5.575275e-54	-8.615850e-47
Msa0472770	Msa1209190	0.852524	4.363410e-61	-8.615850e-47
Msa0472770	Msa1209860	0.836823	7.464344e-57	-8.615850e-47
Msa0472770	Msa1214170	0.802856	4.599005e-49	-8.615850e-47
Msa0472770	Msa1225100	0.834396	3.071491e-56	-8.615850e-47
Msa0472770	Msa1234620	0.821851	3.240208e-53	-8.615850e-47
Msa0472770	Msa1238680	0.831367	1.737384e-55	-8.615850e-47
Msa0472770	Msa1238690	0.808952	2.405211e-50	-8.615850e-47
Msa0472770	Msa1246700	0.803762	2.985865e-49	-8.615850e-47
Msa0472770	Msa1250110	0.805664	1.196821e-49	-8.615850e-47
Msa0472770	Msa1258370	0.815439	9.237840e-52	-8.615850e-47
Msa0472770	Msa1258670	0.800458	1.427572e-48	-8.615850e-47
Msa0472770	Msa1261850	0.807194	5.693010e-50	-8.615850e-47
Msa0472770	Msa1265590	0.807597	4.676507e-50	-8.615850e-47
Msa0472770	Msa1266330	0.805927	1.054045e-49	-8.615850e-47
Msa0472770	Msa1270660	0.828727	7.653178e-55	-8.615850e-47
Msa0472770	Msa1270730	0.813715	2.224035e-51	-8.615850e-47
Msa0472770	Msa1277780	0.824661	7.153526e-54	-8.615850e-47
Msa0472770	Msa1280150	0.831265	1.840769e-55	-8.615850e-47
Msa0472770	Msa1280170	0.859772	3.282718e-63	-8.615850e-47
Msa0472770	Msa1285200	0.852677	3.944654e-61	-8.615850e-47
Msa0472770	Msa1298100	0.817255	3.625893e-52	-8.615850e-47
Msa0472770	Msa1307180	0.841566	4.396854e-58	-8.615850e-47
Msa0472770	Msa1316360	0.840392	8.941409e-58	-8.615850e-47
Msa0472770	Msa1329870	0.835686	1.452276e-56	-8.615850e-47
Msa0472770	Msa1332050	0.844196	8.781741e-59	-8.615850e-47
Msa0472770	Msa1335230	0.806816	6.844700e-50	-8.615850e-47
Msa0472770	Msa1336040	0.839126	1.909226e-57	-8.615850e-47
Msa0472770	Msa1355890	0.805939	1.047681e-49	-8.615850e-47
Msa0472770	Msa1360020	0.801252	9.830995e-49	-8.615850e-47
Msa0472770	Msa1361250	0.855264	7.090717e-62	-8.615850e-47
Msa0472770	Msa1364160	0.818326	2.077622e-52	-8.615850e-47
Msa0472770	Msa1370590	0.853148	2.894324e-61	-8.615850e-47
Msa0472770	Msa1381480	0.808753	2.652743e-50	-8.615850e-47
Msa0472770	Msa1382020	0.818044	2.406401e-52	-8.615850e-47
Msa0472770	Msa1384100	0.852698	3.892919e-61	-8.615850e-47
Msa0472770	Msa1389760	0.807284	5.450510e-50	-8.615850e-47
Msa0472770	Msa1391550	0.805976	1.028942e-49	-8.615850e-47
Msa0472770	Msa1395730	0.809973	1.451783e-50	-8.615850e-47
Msa0472770	Msa1405220	0.838883	2.206234e-57	-8.615850e-47
Msa0472770	Msa1416260	0.805437	1.335638e-49	-8.615850e-47
Msa0472770	Msa1420270	0.812067	5.108218e-51	-8.615850e-47
Msa0472770	Msa1421890	0.802371	5.791015e-49	-8.615850e-47
Msa0472770	Msa1421900	0.947071	1.368706e-105	-8.615850e-47
Msa0472770	Msa1422810	0.843637	1.239682e-58	-8.615850e-47
Msa0472770	Msa1424350	0.844487	7.335625e-59	-8.615850e-47
Msa0472770	Msa1424630	0.800347	1.503756e-48	-8.615850e-47
Msa0472770	Msa1428780	0.822507	2.283245e-53	-8.615850e-47
Msa0472770	Msa1432130	0.805356	1.388952e-49	-8.615850e-47
Msa0472770	Msa1444120	0.853781	1.904075e-61	-8.615850e-47
Msa0472770	Msa1457160	0.816115	6.531816e-52	-8.615850e-47
Msa0472770	Msa1462470	0.831757	1.392537e-55	-8.615850e-47
Msa0472770	Msa1465180	0.806546	7.805478e-50	-8.615850e-47
Msa0239060	Msa0472770	0.831103	2.017568e-55	-8.615850e-47
Msa0240270	Msa0472770	0.837090	6.381493e-57	-8.615850e-47
Msa0244970	Msa0472770	0.816317	5.886273e-52	-8.615850e-47
Msa0244980	Msa0472770	0.817079	3.970992e-52	-8.615850e-47
Msa0245540	Msa0472770	0.818377	2.023676e-52	-8.615850e-47
Msa0259440	Msa0472770	0.836438	9.355923e-57	-8.615850e-47
Msa0259580	Msa0472770	0.839084	1.958062e-57	-8.615850e-47
Msa0276950	Msa0472770	0.803042	4.210475e-49	-8.615850e-47
Msa0282720	Msa0472770	0.814180	1.756314e-51	-8.615850e-47
Msa0283420	Msa0472770	0.817473	3.237814e-52	-8.615850e-47
Msa0284240	Msa0472770	0.823057	1.700038e-53	-8.615850e-47
Msa0284450	Msa0472770	0.815116	1.089905e-51	-8.615850e-47
Msa0296790	Msa0472770	0.809559	1.781906e-50	-8.615850e-47
Msa0305620	Msa0472770	0.865710	4.846463e-65	-8.615850e-47
Msa0312910	Msa0472770	0.838147	3.416901e-57	-8.615850e-47
Msa0319290	Msa0472770	0.808738	2.672828e-50	-8.615850e-47
Msa0321690	Msa0472770	0.828819	7.273406e-55	-8.615850e-47
Msa0322680	Msa0472770	0.809040	2.302598e-50	-8.615850e-47
Msa0347750	Msa0472770	0.839060	1.986395e-57	-8.615850e-47
Msa0358110	Msa0472770	0.941810	2.172894e-101	-8.615850e-47
Msa0358120	Msa0472770	0.905065	6.358461e-80	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472770	MtrunA17_Chr3g0116141	94.964	139	7	0	1	139	1	139	9.54e-93	264
Msa0472770	MtrunA17_Chr3g0116151	94.964	139	7	0	1	139	2	140	1.08e-92	264
Msa0472770	MtrunA17_Chr4g0057641	73.723	137	36	0	3	139	4	140	6.34e-69	204
Msa0472770	MtrunA17_Chr4g0057651	75.188	133	33	0	6	138	7	139	9.00e-68	201
Msa0472770	MtrunA17_Chr4g0057661	73.529	136	36	0	3	138	4	139	1.22e-67	201
Msa0472770	MtrunA17_Chr6g0459231	55.474	137	61	0	2	138	5	141	1.62e-51	160
Msa0472770	MtrunA17_Chr7g0225921	52.174	138	65	1	2	138	3	140	6.05e-46	146
Msa0472770	MtrunA17_Chr8g0373691	48.148	135	69	1	5	138	53	187	4.76e-35	120
Msa0472770	MtrunA17_Chr7g0245911	41.667	144	74	4	6	139	48	191	3.31e-28	102
Msa0472770	MtrunA17_Chr3g0111371	38.168	131	78	1	9	139	9	136	6.45e-28	100
Msa0472770	MtrunA17_Chr5g0434951	39.394	132	76	2	9	138	8	137	3.30e-27	98.6
Msa0472770	MtrunA17_Chr8g0392951	36.567	134	85	0	6	139	25	158	6.66e-27	98.6
Msa0472770	MtrunA17_Chr1g0161211	38.806	134	81	1	6	138	47	180	1.79e-26	98.2
Msa0472770	MtrunA17_Chr1g0169581	38.346	133	79	1	9	138	8	140	9.07e-26	94.7
Msa0472770	MtrunA17_Chr8g0351681	39.161	143	78	3	6	139	50	192	1.51e-25	95.9
Msa0472770	MtrunA17_Chr8g0391691	38.462	130	79	1	6	134	37	166	7.05e-25	94.0
Msa0472770	MtrunA17_Chr6g0482731	35.821	134	85	1	6	138	27	160	4.95e-22	86.3
Msa0472770	MtrunA17_Chr4g0033601	35.714	140	81	3	6	139	6	142	1.35e-21	84.3
Msa0472770	MtrunA17_Chr5g0402331	34.586	133	86	1	7	138	50	182	2.73e-21	84.7
Msa0472770	MtrunA17_Chr1g0169621	30.380	158	82	2	9	138	8	165	1.01e-20	82.8
Msa0472770	MtrunA17_Chr5g0402361	34.586	133	86	1	7	138	222	354	3.12e-20	84.7
Msa0472770	MtrunA17_Chr5g0402361	34.328	134	84	2	7	138	50	181	2.99e-18	79.3
Msa0472770	MtrunA17_Chr4g0044961	33.846	130	85	1	9	138	61	189	5.89e-20	81.3
Msa0472770	MtrunA17_Chr1g0188171	33.094	139	82	2	6	138	13	146	1.47e-19	79.3
Msa0472770	MtrunA17_Chr7g0254731	30.935	139	85	2	6	138	13	146	2.57e-19	78.6
Msa0472770	MtrunA17_Chr5g0440931	30.216	139	86	2	6	138	13	146	4.56e-18	75.5
Msa0472770	MtrunA17_Chr6g0460211	30.216	139	86	2	6	138	13	146	4.92e-18	75.1
Msa0472770	MtrunA17_Chr1g0166281	33.071	127	84	1	13	138	20	146	6.24e-18	75.1
Msa0472770	MtrunA17_Chr3g0093271	30.496	141	87	2	4	138	62	197	1.31e-17	75.5
Msa0472770	MtrunA17_Chr7g0256171	33.333	135	87	2	8	139	8	142	2.68e-17	73.6
Msa0472770	MtrunA17_Chr7g0256701	33.577	137	85	3	8	138	76	212	6.40e-17	73.9
Msa0472770	MtrunA17_Chr8g0366401	32.090	134	79	2	9	134	21	150	1.65e-16	71.6
Msa0472770	MtrunA17_Chr1g0185001	29.630	135	95	0	4	138	11	145	2.29e-16	70.9
Msa0472770	MtrunA17_Chr5g0396261	34.234	111	70	1	30	137	2	112	9.55e-16	68.6
Msa0472770	MtrunA17_Chr4g0062221	32.331	133	87	2	9	138	15	147	1.32e-15	69.3
Msa0472770	MtrunA17_Chr3g0121191	30.827	133	81	2	7	138	95	217	2.27e-15	70.1
Msa0472770	MtrunA17_Chr7g0245371	32.857	140	81	2	13	139	32	171	3.99e-15	68.2
Msa0472770	MtrunA17_Chr8g0368681	30.827	133	89	2	9	138	16	148	7.14e-15	67.4
Msa0472770	MtrunA17_Chr5g0397101	31.387	137	89	2	5	139	371	504	2.40e-13	65.9
Msa0472770	MtrunA17_Chr8g0387671	30.657	137	90	2	5	139	371	504	3.53e-13	65.5
Msa0472770	MtrunA17_Chr2g0329371	31.884	138	89	2	7	139	66	203	4.21e-13	63.5
Msa0472770	MtrunA17_Chr4g0064231	30.519	154	84	5	7	139	66	217	5.10e-13	63.5
Msa0472770	MtrunA17_Chr6g0450921	31.250	128	87	1	13	139	37	164	7.68e-13	62.0
Msa0472770	MtrunA17_Chr0c02g0489761	27.407	135	97	1	5	139	383	516	1.23e-12	63.9
Msa0472770	MtrunA17_Chr5g0409441	27.273	132	95	1	9	139	26	157	1.76e-12	60.8
Msa0472770	MtrunA17_Chr5g0441691	27.941	136	93	2	5	138	373	505	3.08e-12	62.8
Msa0472770	MtrunA17_Chr7g0245231	30.709	127	87	1	13	138	38	164	3.61e-12	60.5
Msa0472770	MtrunA17_Chr7g0274101	29.851	134	93	1	6	138	13	146	5.19e-12	59.7
Msa0472770	MtrunA17_Chr7g0242561	30.952	126	87	0	14	139	370	495	5.84e-12	62.0
Msa0472770	MtrunA17_Chr5g0444171	29.197	137	92	2	5	139	397	530	1.54e-11	60.5
Msa0472770	MtrunA17_Chr3g0131181	29.197	137	93	2	4	139	333	466	2.45e-11	60.1
Msa0472770	MtrunA17_Chr7g0257751	30.000	140	90	2	4	139	362	497	3.42e-11	59.7
Msa0472770	MtrunA17_Chr1g0173541	28.676	136	97	0	4	139	356	491	3.83e-11	59.3
Msa0472770	MtrunA17_Chr1g0157131	26.277	137	96	2	5	139	379	512	4.30e-11	59.3
Msa0472770	MtrunA17_Chr3g0125311	29.412	153	91	4	1	138	9	159	9.13e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0472770	AT1G76650.1	47.826	138	72	0	2	139	40	177	1.41e-38	129
Msa0472770	AT1G76650.3	47.826	138	72	0	2	139	40	177	1.41e-38	129
Msa0472770	AT1G76640.1	47.552	143	68	3	2	139	19	159	6.74e-36	121
Msa0472770	AT1G76650.2	46.377	138	64	1	2	139	40	167	2.20e-35	120
Msa0472770	AT5G42380.1	45.113	133	71	1	9	139	53	185	1.33e-33	116
Msa0472770	AT3G50770.1	45.985	137	68	2	8	138	67	203	2.54e-33	116
Msa0472770	AT3G01830.1	40.876	137	76	2	6	139	12	146	1.76e-27	99.8
Msa0472770	AT1G24620.1	39.552	134	80	1	6	138	38	171	7.92e-27	99.4
Msa0472770	AT5G37770.1	35.252	139	85	1	6	139	18	156	1.67e-24	92.4
Msa0472770	AT5G37770.2	35.252	139	85	1	6	139	18	156	1.67e-24	92.4
Msa0472770	AT1G66400.1	33.088	136	88	1	6	138	16	151	1.86e-24	92.4
Msa0472770	AT1G18210.2	36.090	133	82	1	6	138	24	153	2.58e-23	89.7
Msa0472770	AT1G18210.1	36.090	133	82	1	6	138	24	153	2.58e-23	89.7
Msa0472770	AT1G73630.1	32.824	131	85	1	9	139	24	151	1.37e-21	85.1
Msa0472770	AT3G07490.1	35.211	142	89	2	1	139	1	142	4.18e-20	80.9
Msa0472770	AT1G05990.1	35.507	138	85	2	6	139	6	143	1.75e-19	79.3
Msa0472770	AT3G59440.1	34.074	135	87	1	7	139	53	187	4.86e-19	79.3
Msa0472770	AT3G22930.1	32.090	134	90	1	6	138	36	169	1.21e-18	77.8
Msa0472770	AT4G03290.1	34.014	147	87	4	1	139	1	145	1.23e-18	77.4
Msa0472770	AT2G15680.1	32.836	134	87	2	7	139	52	183	1.33e-18	78.2
Msa0472770	AT2G43290.1	32.867	143	86	3	6	139	66	207	1.39e-18	78.6
Msa0472770	AT3G56800.1	30.935	139	85	2	6	138	13	146	3.01e-18	76.3
Msa0472770	AT2G41110.1	30.935	139	85	2	6	138	13	146	3.01e-18	76.3
Msa0472770	AT2G27030.1	30.935	139	85	2	6	138	13	146	3.01e-18	76.3
Msa0472770	AT5G21274.1	30.935	139	85	2	6	138	13	146	3.04e-18	76.3
Msa0472770	AT1G66410.1	30.216	139	86	2	6	138	13	146	3.24e-18	76.3
Msa0472770	AT5G37780.1	30.216	139	86	2	6	138	13	146	3.24e-18	76.3
Msa0472770	AT5G17470.1	31.343	134	89	1	9	139	6	139	3.70e-18	75.9
Msa0472770	AT2G27030.3	30.935	139	85	2	6	138	13	146	5.81e-18	76.3
Msa0472770	AT3G43810.1	30.216	139	86	2	6	138	13	146	6.79e-18	75.1
Msa0472770	AT4G14640.1	31.343	134	91	1	6	138	14	147	1.77e-17	74.3
Msa0472770	AT4G12860.1	34.074	135	86	2	8	139	8	142	2.66e-17	73.9
Msa0472770	AT3G10190.1	32.331	133	88	2	8	138	73	205	2.77e-17	75.1
Msa0472770	AT3G43810.2	30.216	139	86	2	6	138	13	146	3.02e-17	75.1
Msa0472770	AT2G41100.7	27.815	151	91	2	6	138	67	217	4.66e-16	73.2
Msa0472770	AT2G41100.6	27.815	151	91	2	6	138	67	217	4.66e-16	73.2
Msa0472770	AT2G41100.3	27.815	151	91	2	6	138	67	217	4.66e-16	73.2
Msa0472770	AT1G18530.1	32.331	133	87	1	9	138	11	143	6.15e-16	70.5
Msa0472770	AT2G41100.4	27.815	151	91	2	6	138	102	252	7.07e-16	72.8
Msa0472770	AT2G41100.4	25.333	150	95	2	6	138	13	162	9.43e-13	64.3
Msa0472770	AT2G41100.1	27.815	151	91	2	6	138	102	252	7.07e-16	72.8
Msa0472770	AT2G41100.1	25.333	150	95	2	6	138	13	162	9.43e-13	64.3
Msa0472770	AT3G50360.1	32.812	128	85	1	13	139	35	162	8.06e-16	70.5
Msa0472770	AT2G41110.2	29.139	151	84	3	6	138	13	158	1.13e-15	69.7
Msa0472770	AT2G36180.1	28.889	135	92	2	9	139	4	138	3.24e-15	68.2
Msa0472770	AT3G03400.1	29.927	137	87	4	1	131	1	134	3.98e-15	67.8
Msa0472770	AT5G37780.2	27.273	154	86	3	6	138	13	161	3.61e-14	65.9
Msa0472770	AT4G23650.1	32.847	137	87	2	5	139	383	516	9.28e-14	67.4
Msa0472770	AT5G12180.1	30.370	135	93	1	5	139	378	511	1.95e-13	66.6
Msa0472770	AT5G37780.4	28.571	126	79	2	19	138	13	133	3.43e-13	62.8
Msa0472770	AT4G14640.2	29.752	121	84	1	19	138	9	129	3.66e-13	62.4
Msa0472770	AT5G19360.1	29.630	135	94	1	5	139	373	506	3.72e-13	65.5
Msa0472770	AT1G66410.2	28.571	126	79	2	19	138	36	156	4.42e-13	62.8
Msa0472770	AT5G37780.3	28.571	126	79	2	19	138	52	172	7.14e-13	62.8
Msa0472770	AT3G51850.1	32.540	126	85	0	14	139	368	493	7.20e-13	64.7
Msa0472770	AT1G66410.4	32.075	106	59	3	41	138	10	110	1.17e-12	60.8
Msa0472770	AT1G66410.3	32.075	106	59	3	41	138	10	110	1.17e-12	60.8
Msa0472770	AT1G32250.1	29.197	137	82	2	9	134	20	152	1.34e-12	62.0
Msa0472770	AT3G43810.4	32.075	106	59	3	41	138	10	110	1.92e-12	60.1
Msa0472770	AT3G43810.3	32.075	106	59	3	41	138	10	110	1.92e-12	60.1
Msa0472770	AT1G76040.1	29.197	137	92	2	5	139	178	311	4.29e-12	62.4
Msa0472770	AT1G76040.4	29.197	137	92	2	5	139	178	311	4.29e-12	62.4
Msa0472770	AT1G76040.2	29.197	137	92	2	5	139	416	549	4.43e-12	62.4
Msa0472770	AT3G25600.1	30.075	133	90	2	9	138	16	148	6.18e-12	60.1
Msa0472770	AT2G41090.1	26.316	133	96	1	6	138	13	143	7.66e-12	60.5
Msa0472770	AT4G37010.2	26.515	132	96	1	9	139	35	166	1.21e-11	59.3
Msa0472770	AT4G37010.1	26.515	132	96	1	9	139	31	162	1.29e-11	59.3
Msa0472770	AT3G51920.1	26.866	134	97	1	6	138	13	146	1.54e-11	58.5
Msa0472770	AT2G41410.1	29.630	135	91	3	8	138	73	207	1.54e-11	59.7
Msa0472770	AT2G31500.1	32.374	139	91	2	4	139	370	508	1.59e-11	60.8
Msa0472770	AT3G03000.1	29.104	134	93	1	4	135	19	152	3.70e-11	58.2
Msa0472770	AT3G10660.2	30.935	139	88	4	4	139	490	623	5.10e-11	59.7
Msa0472770	AT3G10660.1	30.935	139	88	4	4	139	490	623	5.10e-11	59.7
Msa0472770	AT5G12480.1	28.467	137	97	1	4	139	363	499	6.81e-11	59.3
Msa0472770	AT5G12480.2	28.467	137	97	1	4	139	269	405	6.88e-11	58.9

Find 26 sgRNAs with CRISPR-Local

Find 31 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGGAATTAATTGCTTTGA+TGG	0.320451	3_3:+75164317	Msa0472770:CDS
TTTGTTGAAAGAAGCTGAAA+TGG	0.376240	3_3:+75164251	Msa0472770:CDS
TGGTGATGGATATTTGAGTT+TGG	0.381496	3_3:+75164296	Msa0472770:CDS
AGACAAAGGCTGGGAGTAAT+GGG	0.401953	3_3:+75164219	Msa0472770:CDS
AGCCTTTGTCTTAGCTCTGC+TGG	0.405548	3_3:-75164207	None:intergenic
GAAAAGGATGCTTAAGAAGA+TGG	0.405701	3_3:+75164434	Msa0472770:CDS
AGCAGAGCTAAGACAAAGGC+TGG	0.426380	3_3:+75164209	Msa0472770:CDS
TTAATTGCTTTGATGGAGGA+AGG	0.458662	3_3:+75164324	Msa0472770:CDS
AAGACAAAGGCTGGGAGTAA+TGG	0.460108	3_3:+75164218	Msa0472770:CDS
AAAAGGATGCTTAAGAAGAT+GGG	0.477766	3_3:+75164435	Msa0472770:CDS
AGAAGCTGAAATGGCTATTG+AGG	0.481748	3_3:+75164260	Msa0472770:CDS
TAACACCAAAGAGTTTGAAA+AGG	0.492655	3_3:+75164418	Msa0472770:CDS
TGGAGAGGAACAAAAGTTGA+AGG	0.498848	3_3:+75164347	Msa0472770:CDS
ATTGCTTTGATGGAGGAAGG+TGG	0.541567	3_3:+75164327	Msa0472770:CDS
TGATGGATATTTGAGTTTGG+AGG	0.566788	3_3:+75164299	Msa0472770:CDS
GGAATTAATTGCTTTGATGG+AGG	0.567051	3_3:+75164320	Msa0472770:CDS
TGAAATGGCTATTGAGGCAA+TGG	0.572267	3_3:+75164266	Msa0472770:CDS
TGATGAAGATGGTGATGGAA+AGG	0.579290	3_3:+75164179	Msa0472770:CDS
CACCAGCAGAGCTAAGACAA+AGG	0.624826	3_3:+75164205	Msa0472770:CDS
GCAGAGCTAAGACAAAGGCT+GGG	0.627677	3_3:+75164210	Msa0472770:CDS
TTTGATGGAGGAAGGTGGAG+AGG	0.629126	3_3:+75164332	Msa0472770:CDS
ATTGAGGCAATGGATTCAGA+TGG	0.638749	3_3:+75164276	Msa0472770:CDS
ATGTATGATAGTGAGAAGTG+TGG	0.644233	3_3:+75164390	Msa0472770:CDS
GCAATGGATTCAGATGGTGA+TGG	0.644671	3_3:+75164282	Msa0472770:CDS
TTATAAAAGATGAAGAACGC+GGG	0.655567	3_3:+75164132	None:intergenic
ATTATAAAAGATGAAGAACG+CGG	0.665781	3_3:+75164131	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTAAACATTTTGATTTGAA+TGG	+	chr3_3:75164492-75164511	Msa0472770:CDS	15.0%
!!!	TTAAACATTTTGATTTGAAT+GGG	+	chr3_3:75164493-75164512	Msa0472770:CDS	15.0%
!!!	TAAACATTTTGATTTGAATG+GGG	+	chr3_3:75164494-75164513	Msa0472770:CDS	20.0%
!!!	CTTAGATATTTTGATGAAGA+TGG	+	chr3_3:75164168-75164187	Msa0472770:CDS	25.0%
!!!	TATTTTGATGAAGATGGTGA+TGG	+	chr3_3:75164174-75164193	Msa0472770:CDS	30.0%
	TTTGTTGAAAGAAGCTGAAA+TGG	+	chr3_3:75164251-75164270	Msa0472770:CDS	30.0%
	TAACACCAAAGAGTTTGAAA+AGG	+	chr3_3:75164418-75164437	Msa0472770:CDS	30.0%
	AAAAGGATGCTTAAGAAGAT+GGG	+	chr3_3:75164435-75164454	Msa0472770:CDS	30.0%
!!	TGGTGATGGATATTTGAGTT+TGG	+	chr3_3:75164296-75164315	Msa0472770:CDS	35.0%
!	TGATGGATATTTGAGTTTGG+AGG	+	chr3_3:75164299-75164318	Msa0472770:CDS	35.0%
	GGAGGAATTAATTGCTTTGA+TGG	+	chr3_3:75164317-75164336	Msa0472770:CDS	35.0%
	GGAATTAATTGCTTTGATGG+AGG	+	chr3_3:75164320-75164339	Msa0472770:CDS	35.0%
	TTAATTGCTTTGATGGAGGA+AGG	+	chr3_3:75164324-75164343	Msa0472770:CDS	35.0%
!	ATGTATGATAGTGAGAAGTG+TGG	+	chr3_3:75164390-75164409	Msa0472770:CDS	35.0%
!	AGCATCCTTTTCAAACTCTT+TGG	-	chr3_3:75164426-75164445	None:intergenic	35.0%
	GAAAAGGATGCTTAAGAAGA+TGG	+	chr3_3:75164434-75164453	Msa0472770:CDS	35.0%
!!!	CATTTTGATTTGAATGGGGA+TGG	+	chr3_3:75164498-75164517	Msa0472770:CDS	35.0%
!!	TGATGAAGATGGTGATGGAA+AGG	+	chr3_3:75164179-75164198	Msa0472770:CDS	40.0%
	AGAAGCTGAAATGGCTATTG+AGG	+	chr3_3:75164260-75164279	Msa0472770:CDS	40.0%
	TGAAATGGCTATTGAGGCAA+TGG	+	chr3_3:75164266-75164285	Msa0472770:CDS	40.0%
!	ATTGAGGCAATGGATTCAGA+TGG	+	chr3_3:75164276-75164295	Msa0472770:CDS	40.0%
	TGGAGAGGAACAAAAGTTGA+AGG	+	chr3_3:75164347-75164366	Msa0472770:CDS	40.0%
	AAGACAAAGGCTGGGAGTAA+TGG	+	chr3_3:75164218-75164237	Msa0472770:CDS	45.0%
	AGACAAAGGCTGGGAGTAAT+GGG	+	chr3_3:75164219-75164238	Msa0472770:CDS	45.0%
!	GCAATGGATTCAGATGGTGA+TGG	+	chr3_3:75164282-75164301	Msa0472770:CDS	45.0%
	ATTGCTTTGATGGAGGAAGG+TGG	+	chr3_3:75164327-75164346	Msa0472770:CDS	45.0%
	CACCAGCAGAGCTAAGACAA+AGG	+	chr3_3:75164205-75164224	Msa0472770:CDS	50.0%
!!	AGCCTTTGTCTTAGCTCTGC+TGG	-	chr3_3:75164210-75164229	None:intergenic	50.0%
	AGCAGAGCTAAGACAAAGGC+TGG	+	chr3_3:75164209-75164228	Msa0472770:CDS	50.0%
	GCAGAGCTAAGACAAAGGCT+GGG	+	chr3_3:75164210-75164229	Msa0472770:CDS	50.0%
	TTTGATGGAGGAAGGTGGAG+AGG	+	chr3_3:75164332-75164351	Msa0472770:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_3	gene	75164141	75164560	75164141	ID=Msa0472770;Name=Msa0472770
chr3_3	mRNA	75164141	75164560	75164141	ID=Msa0472770-mRNA-1;Parent=Msa0472770;Name=Msa0472770-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|139
chr3_3	exon	75164141	75164560	75164141	ID=Msa0472770-mRNA-1:exon:19411;Parent=Msa0472770-mRNA-1
chr3_3	CDS	75164141	75164560	75164141	ID=Msa0472770-mRNA-1:cds;Parent=Msa0472770-mRNA-1

Gene Sequence

>Msa0472770

ATGAAGAACGCGGGATTCGAGCATGTTCTTAGATATTTTGATGAAGATGGTGATGGAAAGGTTTCACCAGCAGAGCTAAGACAAAGGCTGGGAGTAATGGGAGAAGAGATTTTGTTGAAAGAAGCTGAAATGGCTATTGAGGCAATGGATTCAGATGGTGATGGATATTTGAGTTTGGAGGAATTAATTGCTTTGATGGAGGAAGGTGGAGAGGAACAAAAGTTGAAGGATTTGAGAGATGCATTTGAGATGTATGATAGTGAGAAGTGTGGATTTATAACACCAAAGAGTTTGAAAAGGATGCTTAAGAAGATGGGTGAGTCTAAGTCTATTGATGAATGTAAAGCTATGATTAAACATTTTGATTTGAATGGGGATGGTGTGCTTAGCTTTGATGAATTCACAGTAATGATGCAGTGA

Protein sequence

>Msa0472770

MKNAGFEHVLRYFDEDGDGKVSPAELRQRLGVMGEEILLKEAEMAIEAMDSDGDGYLSLEELIALMEEGGEEQKLKDLRDAFEMYDSEKCGFITPKSLKRMLKKMGESKSIDECKAMIKHFDLNGDGVLSFDEFTVMMQ*