Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443740 | sp|P93484|VSR1_PEA | 93.569 | 622 | 34 | 2 | 5 | 622 | 4 | 623 | 0.0 | 1213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443740 | A0A396HQY9 | 98.403 | 626 | 6 | 1 | 1 | 622 | 1 | 626 | 0.0 | 1276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0711030 | Msa1443740 | 0.916099 | 2.676330e-85 | -8.615850e-47 |
| Msa0127650 | Msa1443740 | 0.811204 | 7.870875e-51 | -8.615850e-47 |
| Msa1257750 | Msa1443740 | 0.800954 | 1.130753e-48 | -8.615850e-47 |
| Msa0458460 | Msa1443740 | 0.819099 | 1.387213e-52 | -8.615850e-47 |
| Msa0478370 | Msa1443740 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa1031660 | Msa1443740 | 0.827265 | 1.720725e-54 | -8.615850e-47 |
| Msa1070720 | Msa1443740 | 0.816099 | 6.584128e-52 | -8.615850e-47 |
| Msa0581010 | Msa1443740 | 0.987842 | 9.648783e-172 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443740 | MtrunA17_Chr5g0393731 | 98.403 | 626 | 6 | 1 | 1 | 622 | 1 | 626 | 0.0 | 1276 |
| Msa1443740 | MtrunA17_Chr1g0207291 | 88.177 | 609 | 69 | 2 | 17 | 622 | 24 | 632 | 0.0 | 1133 |
| Msa1443740 | MtrunA17_Chr8g0334591 | 66.077 | 622 | 205 | 4 | 1 | 619 | 5 | 623 | 0.0 | 890 |
| Msa1443740 | MtrunA17_Chr7g0244951 | 66.337 | 606 | 195 | 4 | 19 | 619 | 22 | 623 | 0.0 | 868 |
| Msa1443740 | MtrunA17_Chr2g0296671 | 63.487 | 608 | 217 | 3 | 7 | 613 | 8 | 611 | 0.0 | 808 |
| Msa1443740 | MtrunA17_Chr3g0133721 | 75.000 | 44 | 11 | 0 | 17 | 60 | 24 | 67 | 3.62e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443740 | AT2G14740.2 | 84.463 | 605 | 93 | 1 | 19 | 622 | 24 | 628 | 0.0 | 1097 |
| Msa1443740 | AT2G14740.1 | 84.463 | 605 | 93 | 1 | 19 | 622 | 24 | 628 | 0.0 | 1097 |
| Msa1443740 | AT2G14720.1 | 83.553 | 608 | 99 | 1 | 16 | 622 | 21 | 628 | 0.0 | 1090 |
| Msa1443740 | AT2G14720.2 | 83.553 | 608 | 99 | 1 | 16 | 622 | 21 | 628 | 0.0 | 1090 |
| Msa1443740 | AT3G52850.1 | 71.082 | 619 | 174 | 4 | 4 | 620 | 5 | 620 | 0.0 | 928 |
| Msa1443740 | AT2G30290.1 | 66.502 | 609 | 200 | 3 | 4 | 609 | 6 | 613 | 0.0 | 895 |
| Msa1443740 | AT2G30290.2 | 66.502 | 609 | 200 | 3 | 4 | 609 | 6 | 613 | 0.0 | 895 |
| Msa1443740 | AT4G20110.1 | 61.935 | 620 | 222 | 6 | 6 | 617 | 7 | 620 | 0.0 | 823 |
| Msa1443740 | AT1G30900.1 | 62.625 | 602 | 219 | 4 | 9 | 610 | 15 | 610 | 0.0 | 813 |
| Msa1443740 | AT4G20110.2 | 61.058 | 624 | 224 | 8 | 6 | 617 | 7 | 623 | 0.0 | 806 |
| Msa1443740 | AT2G34940.1 | 58.843 | 605 | 242 | 4 | 7 | 611 | 14 | 611 | 0.0 | 766 |
Find 194 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGTACAAATATAGAATT+AGG | 0.152074 | tig0030514:-28112 | Msa1443740:CDS |
| ACAATACCCTCTGCTCTTAT+TGG | 0.161645 | tig0030514:-30775 | Msa1443740:CDS |
| GGTAGACTCCCTAATTATTT+TGG | 0.172210 | tig0030514:-31704 | Msa1443740:five_prime_UTR |
| AATCGCAAACCAAAATAATT+AGG | 0.178784 | tig0030514:+31695 | None:intergenic |
| TTAGAAATTTAGAATGTTCT+TGG | 0.226695 | tig0030514:-27695 | Msa1443740:three_prime_UTR |
| CTTTGATGATTGACGTGATT+TGG | 0.258850 | tig0030514:+27863 | None:intergenic |
| ATCTTGCTCTTCTTTCAAAA+TGG | 0.266286 | tig0030514:+30063 | None:intergenic |
| TCAGTACTGTTTATGTTAGT+TGG | 0.267130 | tig0030514:-31443 | Msa1443740:CDS |
| TGTTGCGTGAATTTGTATTT+AGG | 0.271625 | tig0030514:-27521 | Msa1443740:three_prime_UTR |
| GTTTCTTTGCTTTGAAGGTT+TGG | 0.273783 | tig0030514:-30915 | Msa1443740:CDS |
| CAACCCTTATTGTTATCTTT+AGG | 0.286744 | tig0030514:+31278 | None:intergenic |
| CCAAAGGGTTGGGTTGGGTT+TGG | 0.299424 | tig0030514:+31725 | None:intergenic |
| TGCCATTAGTGCTGGGGATA+TGG | 0.300176 | tig0030514:-30725 | Msa1443740:CDS |
| GAACATTCTAAATTTCTAAT+AGG | 0.301786 | tig0030514:+27699 | None:intergenic |
| ACGCACAATGTTGTAACTTA+TGG | 0.303838 | tig0030514:-27622 | Msa1443740:three_prime_UTR |
| GAACTTCTGCTTGGCTGTCC+AGG | 0.305137 | tig0030514:+27885 | None:intergenic |
| CAGTGTCCTACAGGGTTTAA+AGG | 0.310747 | tig0030514:-29023 | Msa1443740:CDS |
| CAGAAAATGCATGTCCGTTC+CGG | 0.315826 | tig0030514:+29193 | None:intergenic |
| TGAGGAGCCCTTGATTACTA+TGG | 0.317046 | tig0030514:-30845 | Msa1443740:CDS |
| GTCTACCAAAGGGTTGGGTT+GGG | 0.318897 | tig0030514:+31720 | None:intergenic |
| GACAGTACCATGTTATATAA+TGG | 0.319024 | tig0030514:+30521 | None:intergenic |
| ATTGGCTTGGGTATGATTGC+TGG | 0.324545 | tig0030514:-28146 | Msa1443740:CDS |
| AGATTGTTTCTTTGCTTTGA+AGG | 0.325371 | tig0030514:-30920 | Msa1443740:CDS |
| TCATCTCTTCTTTCTTCTGA+TGG | 0.327260 | tig0030514:+31483 | None:intergenic |
| GTGTTTGCAGTCGGTGGACC+TGG | 0.328777 | tig0030514:-29255 | Msa1443740:intron |
| ATATTACAGTACTAAATAAA+AGG | 0.342493 | tig0030514:+27740 | None:intergenic |
| CAGACAATATCGTGGTAAAC+TGG | 0.346061 | tig0030514:-29881 | Msa1443740:CDS |
| TTATCCTAAAGATAACAATA+AGG | 0.350659 | tig0030514:-31282 | Msa1443740:CDS |
| GACAACAAGAGTAGGTAATA+TGG | 0.353003 | tig0030514:+29909 | None:intergenic |
| AAAAGGCTCAGAATTCTAAA+TGG | 0.356615 | tig0030514:+27757 | None:intergenic |
| ACAGTACCATGTTATATAAT+GGG | 0.356620 | tig0030514:+30522 | None:intergenic |
| GGCTATTTGTTCTGGATTTG+AGG | 0.358996 | tig0030514:-29839 | Msa1443740:CDS |
| CATCTCTTCTTTCTTCTGAT+GGG | 0.365657 | tig0030514:+31484 | None:intergenic |
| GACCATATCCCCAGCACTAA+TGG | 0.375726 | tig0030514:+30723 | None:intergenic |
| TCCAGTCTCGTGGGATTTCA+TGG | 0.390836 | tig0030514:-27820 | Msa1443740:three_prime_UTR |
| TCTCCCATGGTTTATGCATT+GGG | 0.390836 | tig0030514:+30465 | None:intergenic |
| ATCGCAAACCAAAATAATTA+GGG | 0.392408 | tig0030514:+31696 | None:intergenic |
| ATCTCCCATGGTTTATGCAT+TGG | 0.396833 | tig0030514:+30464 | None:intergenic |
| AACTTCTGCTTGGCTGTCCA+GGG | 0.402153 | tig0030514:+27886 | None:intergenic |
| GACAGTGCGATCGGTAACTT+TGG | 0.403999 | tig0030514:-31344 | Msa1443740:CDS |
| TATCCTAAAGATAACAATAA+GGG | 0.408259 | tig0030514:-31281 | Msa1443740:CDS |
| AGAAAATGCATGTCCGTTCC+GGG | 0.412062 | tig0030514:+29194 | None:intergenic |
| TCCACACTCATCGTTACTAT+TGG | 0.418802 | tig0030514:+30633 | None:intergenic |
| TGTATACAACTCACTTATAC+AGG | 0.418882 | tig0030514:+28324 | None:intergenic |
| AGCAGATGAGACATCCTCTT+CGG | 0.422782 | tig0030514:+30816 | None:intergenic |
| TTTCAAGGTGGAATTATAGT+TGG | 0.424939 | tig0030514:+31526 | None:intergenic |
| AGCACCAGGTTTGGATTTGA+AGG | 0.425579 | tig0030514:+31232 | None:intergenic |
| CAGTACTGTTTATGTTAGTT+GGG | 0.425701 | tig0030514:-31442 | Msa1443740:CDS |
| GACTCGATCGGTTAATTTCA+AGG | 0.427106 | tig0030514:+31511 | None:intergenic |
| TATTATTTCACTGCTCAGTT+GGG | 0.428197 | tig0030514:-27574 | Msa1443740:three_prime_UTR |
| TACAGGTAAAACTGCCAGTC+AGG | 0.431110 | tig0030514:-28204 | Msa1443740:intron |
| GACTTCAGCACAGGCTATGA+TGG | 0.431165 | tig0030514:-30418 | Msa1443740:CDS |
| GTTAAATGCCAGTGTCCTAC+AGG | 0.432639 | tig0030514:-29032 | Msa1443740:CDS |
| CTGAAGTCCTGCTCAGGATC+CGG | 0.438824 | tig0030514:+30433 | None:intergenic |
| GGTAGGAAGAGCACCAGGTT+TGG | 0.440524 | tig0030514:+31223 | None:intergenic |
| ATATTATTTCACTGCTCAGT+TGG | 0.441042 | tig0030514:-27575 | Msa1443740:three_prime_UTR |
| TTGGGTATGATTGCTGGAGG+GGG | 0.442632 | tig0030514:-28140 | Msa1443740:CDS |
| CTTGGGTATGATTGCTGGAG+GGG | 0.451243 | tig0030514:-28141 | Msa1443740:CDS |
| AGTCTACCAAAGGGTTGGGT+TGG | 0.459216 | tig0030514:+31719 | None:intergenic |
| AGGGAGTCTACCAAAGGGTT+GGG | 0.459568 | tig0030514:+31715 | None:intergenic |
| GCAGATGAGACATCCTCTTC+GGG | 0.459853 | tig0030514:+30817 | None:intergenic |
| TTGAAGGATGCCATTAGTGC+TGG | 0.462509 | tig0030514:-30733 | Msa1443740:CDS |
| CGTGATTTGGAACTTCTGCT+TGG | 0.463555 | tig0030514:+27876 | None:intergenic |
| GTTTGGAATGCTCAGAAGGC+TGG | 0.467555 | tig0030514:-30898 | Msa1443740:CDS |
| TGTGAATGCCCCTTGGTTGA+TGG | 0.468992 | tig0030514:-29512 | Msa1443740:CDS |
| CCAGTCAGGCAAAATCCACT+TGG | 0.469198 | tig0030514:-28190 | Msa1443740:CDS |
| CAAAAGAAACCGAAAAGCCT+TGG | 0.473973 | tig0030514:-30345 | Msa1443740:CDS |
| CCAAACCCAACCCAACCCTT+TGG | 0.474453 | tig0030514:-31725 | Msa1443740:five_prime_UTR |
| GCCATGAAATCCCACGAGAC+TGG | 0.474517 | tig0030514:+27819 | None:intergenic |
| TCATACTCGACACGATCATC+AGG | 0.477928 | tig0030514:+30664 | None:intergenic |
| TCAAATTAGATGCCCGATGA+AGG | 0.478586 | tig0030514:-30296 | Msa1443740:CDS |
| CAATACGGTGGTAGCATGGC+TGG | 0.479746 | tig0030514:-31314 | Msa1443740:CDS |
| ACAGTGCGATCGGTAACTTT+GGG | 0.480816 | tig0030514:-31343 | Msa1443740:CDS |
| GTTGATGGTGTTCAATTCAA+AGG | 0.482669 | tig0030514:-29497 | Msa1443740:CDS |
| CCATTGCTCAAACAAACAGC+TGG | 0.487515 | tig0030514:+29805 | None:intergenic |
| GGGTGTGTCCATAGTAATCA+AGG | 0.488151 | tig0030514:+30837 | None:intergenic |
| TGGTCAATGTTAATCTTGAC+TGG | 0.491505 | tig0030514:-30705 | Msa1443740:CDS |
| GAAGGTGAGATGTATTTCAC+TGG | 0.492479 | tig0030514:-27673 | Msa1443740:three_prime_UTR |
| CAAGGTGGAATTATAGTTGG+TGG | 0.493816 | tig0030514:+31529 | None:intergenic |
| GAAGGTTTGGAATGCTCAGA+AGG | 0.501562 | tig0030514:-30902 | Msa1443740:CDS |
| TTCTGAAATCAGAGCAATCA+TGG | 0.503663 | tig0030514:-27921 | Msa1443740:CDS |
| AAAAGAAACCGAAAAGCCTT+GGG | 0.504812 | tig0030514:-30344 | Msa1443740:CDS |
| GGATGTGTGTTGCCATGCAT+TGG | 0.505041 | tig0030514:-27500 | Msa1443740:three_prime_UTR |
| GTAACTAACTTCCACGATCA+AGG | 0.505995 | tig0030514:+31192 | None:intergenic |
| TGTGTACAAATATAGAATTA+GGG | 0.507429 | tig0030514:-28111 | Msa1443740:intron |
| GCTTGGGTATGATTGCTGGA+GGG | 0.509710 | tig0030514:-28142 | Msa1443740:CDS |
| AATGCCGTCATTAAATCTCT+TGG | 0.510279 | tig0030514:-30247 | Msa1443740:intron |
| GGCTTGGGTATGATTGCTGG+AGG | 0.513936 | tig0030514:-28143 | Msa1443740:CDS |
| TAGGGAGTCTACCAAAGGGT+TGG | 0.517105 | tig0030514:+31714 | None:intergenic |
| TTGCGCTCCGGATCCTGAGC+AGG | 0.517442 | tig0030514:-30440 | Msa1443740:CDS |
| AAACAACGGTGGTTGTTGGC+AGG | 0.520508 | tig0030514:-29674 | Msa1443740:CDS |
| TTGTTGATCTTGCAACGCCC+AGG | 0.522495 | tig0030514:+29237 | None:intergenic |
| ATGTGGTTGTTGAAAATTTG+AGG | 0.522629 | tig0030514:-30390 | Msa1443740:CDS |
| AGAACAAATAGCCTTTAAAA+CGG | 0.523531 | tig0030514:+29849 | None:intergenic |
| TGTGCGTGGAAGATTACATA+TGG | 0.526737 | tig0030514:+27638 | None:intergenic |
| TCTTCCTTCAAATCCAAACC+TGG | 0.527152 | tig0030514:-31236 | Msa1443740:CDS |
| AACTTTGGGATTCCTCAATA+CGG | 0.529300 | tig0030514:-31329 | Msa1443740:CDS |
| CCGAAAAGCCTTGGGTGTGG+TGG | 0.530784 | tig0030514:-30336 | Msa1443740:CDS |
| TGAAGGATGCCATTAGTGCT+GGG | 0.532526 | tig0030514:-30732 | Msa1443740:CDS |
| GATGTCAACGGCGAGATTCG+TGG | 0.533817 | tig0030514:-31420 | Msa1443740:CDS |
| CCTGTGCTGAAGTCCTGCTC+AGG | 0.540657 | tig0030514:+30427 | None:intergenic |
| TGGAGATCTTCTGTATATCA+AGG | 0.544120 | tig0030514:-28356 | Msa1443740:CDS |
| TCCTCAATACGGTGGTAGCA+TGG | 0.544648 | tig0030514:-31318 | Msa1443740:CDS |
| AAATTTAGAATGTTCTTGGA+AGG | 0.544801 | tig0030514:-27691 | Msa1443740:three_prime_UTR |
| AAGGTGGAATTATAGTTGGT+GGG | 0.544803 | tig0030514:+31530 | None:intergenic |
| TGCAAAGATTGACAAGTGCA+TGG | 0.545637 | tig0030514:-30113 | Msa1443740:CDS |
| ACTCACTTATACAGGTATCA+TGG | 0.546171 | tig0030514:+28332 | None:intergenic |
| GAGGATGTTGGCATGATGCC+CGG | 0.553226 | tig0030514:-29212 | Msa1443740:CDS |
| GCCATGCTACCACCGTATTG+AGG | 0.554564 | tig0030514:+31317 | None:intergenic |
| GGATTTCATGGCGTGTAGCA+TGG | 0.556572 | tig0030514:-27808 | Msa1443740:three_prime_UTR |
| CTGTTATTGACAACAAGAGT+AGG | 0.558861 | tig0030514:+29901 | None:intergenic |
| GGTGGAGAAGAACAGCTTGT+CGG | 0.558947 | tig0030514:-31399 | Msa1443740:CDS |
| TGACAAACAACGGTGGTTGT+TGG | 0.559077 | tig0030514:-29678 | Msa1443740:CDS |
| CCTGAGCAGGACTTCAGCAC+AGG | 0.560984 | tig0030514:-30427 | Msa1443740:CDS |
| ACTCGTTGCCGATGATATTG+AGG | 0.563097 | tig0030514:-30863 | Msa1443740:CDS |
| AGCTAATATCACTGCATGCA+AGG | 0.568003 | tig0030514:-29644 | Msa1443740:intron |
| CCTACAGGGTTTAAAGGTGA+TGG | 0.569016 | tig0030514:-29017 | Msa1443740:CDS |
| ACTTCACCTGATAAAATCAA+AGG | 0.570340 | tig0030514:-31374 | Msa1443740:CDS |
| GCAGCACAGATCTTAGAGAA+AGG | 0.570785 | tig0030514:-30565 | Msa1443740:CDS |
| TGTTTGCAGTCGGTGGACCT+GGG | 0.574779 | tig0030514:-29254 | Msa1443740:intron |
| ACTTCAGCACAGGCTATGAT+GGG | 0.575024 | tig0030514:-30417 | Msa1443740:CDS |
| AGATCAACAATGGAGGATGT+TGG | 0.577792 | tig0030514:-29224 | Msa1443740:CDS |
| GGTGTTCAATTCAAAGGAGA+CGG | 0.578646 | tig0030514:-29491 | Msa1443740:CDS |
| CGAAAAGCCTTGGGTGTGGT+GGG | 0.579998 | tig0030514:-30335 | Msa1443740:CDS |
| AGCTATGACTGCAGTTGTAG+TGG | 0.582229 | tig0030514:-28376 | Msa1443740:CDS |
| TATCGTGGTAAACTGGAGAA+AGG | 0.582709 | tig0030514:-29874 | Msa1443740:CDS |
| CAAGGGCTCCTCAATATCAT+CGG | 0.583903 | tig0030514:+30855 | None:intergenic |
| CCATGGGAGATATTGCGCTC+CGG | 0.584021 | tig0030514:-30452 | Msa1443740:CDS |
| TTGTTGTGTAAACAGGATGA+TGG | 0.587216 | tig0030514:-29059 | Msa1443740:intron |
| ACTTCTGCTTGGCTGTCCAG+GGG | 0.591243 | tig0030514:+27887 | None:intergenic |
| CTTTAAACCCTGTAGGACAC+TGG | 0.592362 | tig0030514:+29024 | None:intergenic |
| ACCATCCTTCTCCTTGATCG+TGG | 0.593790 | tig0030514:-31203 | Msa1443740:CDS |
| CCAGCTGTTTGTTTGAGCAA+TGG | 0.595530 | tig0030514:-29805 | Msa1443740:intron |
| GGAAAACATGACAGTGCGAT+CGG | 0.595812 | tig0030514:-31353 | Msa1443740:CDS |
| GCGAGTATGTGAATGCCCCT+TGG | 0.597573 | tig0030514:-29519 | Msa1443740:CDS |
| GAATTGAACACCATCAACCA+AGG | 0.597885 | tig0030514:+29502 | None:intergenic |
| CATGGCACAATATATGCCCC+TGG | 0.598457 | tig0030514:-27903 | Msa1443740:CDS |
| TATGTTAGTTGGGATGTCAA+CGG | 0.599268 | tig0030514:-31432 | Msa1443740:CDS |
| TCAGAATTCTAAATGGCTCA+AGG | 0.599721 | tig0030514:+27764 | None:intergenic |
| ATAATTAGGGAGTCTACCAA+AGG | 0.600804 | tig0030514:+31709 | None:intergenic |
| CCGGAGCGCAATATCTCCCA+TGG | 0.600947 | tig0030514:+30452 | None:intergenic |
| TAATTCTATATTTGTACACA+AGG | 0.601328 | tig0030514:+28114 | None:intergenic |
| ATCTGCCAGGATACATTCCG+TGG | 0.601733 | tig0030514:-29542 | Msa1443740:intron |
| TTTAGCGTGGTGGAGGAGCA+AGG | 0.603264 | tig0030514:-31764 | None:intergenic |
| GCAAAGATTGACAAGTGCAT+GGG | 0.604142 | tig0030514:-30112 | Msa1443740:CDS |
| TAATTAGGGAGTCTACCAAA+GGG | 0.605133 | tig0030514:+31710 | None:intergenic |
| AAACCGAAAAGCCTTGGGTG+TGG | 0.605855 | tig0030514:-30339 | Msa1443740:CDS |
| AACTTCCACGATCAAGGAGA+AGG | 0.607585 | tig0030514:+31198 | None:intergenic |
| GACGGTTATACAACTTGTGA+AGG | 0.609305 | tig0030514:-29473 | Msa1443740:intron |
| AATGAAGAAGTACCAATGCA+TGG | 0.611584 | tig0030514:+27488 | None:intergenic |
| CGATCAAGGAGAAGGATGGT+AGG | 0.611973 | tig0030514:+31206 | None:intergenic |
| TACTATGGACACACCCGAAG+AGG | 0.615995 | tig0030514:-30830 | Msa1443740:CDS |
| CATTGCTCAAACAAACAGCT+GGG | 0.621538 | tig0030514:+29806 | None:intergenic |
| AGGATGGTAGGAAGAGCACC+AGG | 0.624048 | tig0030514:+31218 | None:intergenic |
| CAGTCAGGCAAAATCCACTT+GGG | 0.624354 | tig0030514:-28189 | Msa1443740:CDS |
| AATTCTAAATGGCTCAAGGA+GGG | 0.625106 | tig0030514:+27768 | None:intergenic |
| AATTGAACACCATCAACCAA+GGG | 0.625423 | tig0030514:+29503 | None:intergenic |
| AAGTCCCAATGCATAAACCA+TGG | 0.629265 | tig0030514:-30469 | Msa1443740:CDS |
| TCGACACGATCATCAGGATG+AGG | 0.631218 | tig0030514:+30670 | None:intergenic |
| CATGGCGTGTAGCATGGATG+TGG | 0.633190 | tig0030514:-27802 | Msa1443740:three_prime_UTR |
| TCAGAAGGCTGGAGCTTCTG+CGG | 0.634092 | tig0030514:-30887 | Msa1443740:CDS |
| TGTTAATCTTGACTGGAGAG+AGG | 0.634616 | tig0030514:-30698 | Msa1443740:CDS |
| GGGCGTTGCAAGATCAACAA+TGG | 0.636889 | tig0030514:-29234 | Msa1443740:CDS |
| GGCATTCACATACTCGCCCA+CGG | 0.638497 | tig0030514:+29525 | None:intergenic |
| GTCAATAACAGACAATATCG+TGG | 0.638925 | tig0030514:-29889 | Msa1443740:CDS |
| ACATAGTCCCACCACACCCA+AGG | 0.638979 | tig0030514:+30328 | None:intergenic |
| AGTCCCAATGCATAAACCAT+GGG | 0.639703 | tig0030514:-30468 | Msa1443740:CDS |
| TGTTGGCATGATGCCCGGAA+CGG | 0.640813 | tig0030514:-29207 | Msa1443740:CDS |
| CAGTACCATGTTATATAATG+GGG | 0.643079 | tig0030514:+30523 | None:intergenic |
| TTACACCCCATTATATAACA+TGG | 0.646628 | tig0030514:-30528 | Msa1443740:CDS |
| CTGATGGGTCTCGACTCGAT+CGG | 0.649312 | tig0030514:+31499 | None:intergenic |
| TCCACGATCAAGGAGAAGGA+TGG | 0.649403 | tig0030514:+31202 | None:intergenic |
| TTAAATGCCAGTGTCCTACA+GGG | 0.651425 | tig0030514:-29031 | Msa1443740:CDS |
| GAAGGATGCCATTAGTGCTG+GGG | 0.652649 | tig0030514:-30731 | Msa1443740:CDS |
| AATGAGTGCTTGACAAACAA+CGG | 0.653519 | tig0030514:-29688 | Msa1443740:CDS |
| GCACAGATCTTAGAGAAAGG+AGG | 0.654803 | tig0030514:-30562 | Msa1443740:CDS |
| CCATCACCTTTAAACCCTGT+AGG | 0.658035 | tig0030514:+29017 | None:intergenic |
| CGTTGCAAGATCAACAATGG+AGG | 0.658097 | tig0030514:-29231 | Msa1443740:CDS |
| GGTGTGTCCATAGTAATCAA+GGG | 0.660123 | tig0030514:+30838 | None:intergenic |
| ATAAGTTACAACATTGTGCG+TGG | 0.662906 | tig0030514:+27624 | None:intergenic |
| GAATTCTAAATGGCTCAAGG+AGG | 0.671781 | tig0030514:+27767 | None:intergenic |
| ACCAATAGTAACGATGAGTG+TGG | 0.674003 | tig0030514:-30634 | Msa1443740:CDS |
| TTACTCAATGTAAACGCGTG+AGG | 0.679088 | tig0030514:+30499 | None:intergenic |
| TCTGCCAGGATACATTCCGT+GGG | 0.680496 | tig0030514:-29541 | Msa1443740:intron |
| TTGTGTAAACAGGATGATGG+AGG | 0.686610 | tig0030514:-29056 | Msa1443740:intron |
| TTTGGGATTCCTCAATACGG+TGG | 0.689306 | tig0030514:-31326 | Msa1443740:CDS |
| CTGACCAAGAGATTTAATGA+CGG | 0.696138 | tig0030514:+30243 | None:intergenic |
| GTCAACGGCGAGATTCGTGG+TGG | 0.699652 | tig0030514:-31417 | Msa1443740:CDS |
| AGGCTATGATGGGAAAGATG+TGG | 0.711715 | tig0030514:-30407 | Msa1443740:CDS |
| ATCGTGTCGAGTATGAGTTG+TGG | 0.711953 | tig0030514:-30657 | Msa1443740:CDS |
| TAGATTGGGAAGGGATCACG+CGG | 0.718440 | tig0030514:-29940 | Msa1443740:CDS |
| ATTGAACACCATCAACCAAG+GGG | 0.734010 | tig0030514:+29504 | None:intergenic |
| TCGATCGGTTAATTTCAAGG+TGG | 0.742070 | tig0030514:+31514 | None:intergenic |
| GAGTGCTTGACAAACAACGG+TGG | 0.815477 | tig0030514:-29685 | Msa1443740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTAACTATTAAATTTAT+TGG | - | tig0030514:30066-30085 | Msa1443740:CDS | 10.0% |
| !!! | ATTTTAAATGAAATAAAGTT+TGG | + | tig0030514:30092-30111 | None:intergenic | 10.0% |
| !! | AATATTATTAATAGAATTGA+TGG | - | tig0030514:30440-30459 | Msa1443740:CDS | 10.0% |
| !! | AAATGAAATAATAAATTTGT+TGG | - | tig0030514:31261-31280 | Msa1443740:CDS | 10.0% |
| !! | AACTAAAAAAAAAAGAAAGA+AGG | + | tig0030514:28070-28089 | None:intergenic | 15.0% |
| !! | AGATAAACATAATAAGAATA+TGG | + | tig0030514:29080-29099 | None:intergenic | 15.0% |
| !! | TAAACTAAAAGCAATTATAA+AGG | + | tig0030514:29203-29222 | None:intergenic | 15.0% |
| !!! | TAAAATGTTTGTAGTTTTAT+TGG | - | tig0030514:30106-30125 | Msa1443740:CDS | 15.0% |
| !! | AAAATATTAAAAACAGAATG+AGG | + | tig0030514:30359-30378 | None:intergenic | 15.0% |
| !!! | TTTTCCACTATAAAAAAATT+TGG | - | tig0030514:30722-30741 | Msa1443740:CDS | 15.0% |
| !!! | AATTCCAAATTTTTTTATAG+TGG | + | tig0030514:30729-30748 | None:intergenic | 15.0% |
| !! | ATATTACAGTACTAAATAAA+AGG | + | tig0030514:31490-31509 | None:intergenic | 15.0% |
| !! | TTATCCTAAAGATAACAATA+AGG | - | tig0030514:27945-27964 | Msa1443740:intron | 20.0% |
| !! | TATCCTAAAGATAACAATAA+GGG | - | tig0030514:27946-27965 | Msa1443740:intron | 20.0% |
| !! | ATTTAACATTGTAAGAACAT+AGG | + | tig0030514:29665-29684 | None:intergenic | 20.0% |
| !! | AGTAATTCAGTTTCTAATTT+GGG | + | tig0030514:30141-30160 | None:intergenic | 20.0% |
| !! | TAGTAATTCAGTTTCTAATT+TGG | + | tig0030514:30142-30161 | None:intergenic | 20.0% |
| !! | TAATTCTATATTTGTACACA+AGG | + | tig0030514:31116-31135 | None:intergenic | 20.0% |
| !! | TTGTGTACAAATATAGAATT+AGG | - | tig0030514:31115-31134 | Msa1443740:intron | 20.0% |
| !! | TGTGTACAAATATAGAATTA+GGG | - | tig0030514:31116-31135 | Msa1443740:intron | 20.0% |
| !!! | TGCTTTAGAAATTTATCAAT+TGG | + | tig0030514:31185-31204 | None:intergenic | 20.0% |
| !!! | TGAAATAATAAATTTGTTGG+TGG | - | tig0030514:31264-31283 | Msa1443740:CDS | 20.0% |
| !! | GAACATTCTAAATTTCTAAT+AGG | + | tig0030514:31531-31550 | None:intergenic | 20.0% |
| !!! | TTAGAAATTTAGAATGTTCT+TGG | - | tig0030514:31532-31551 | Msa1443740:five_prime_UTR | 20.0% |
| ! | ATCGCAAACCAAAATAATTA+GGG | + | tig0030514:27534-27553 | None:intergenic | 25.0% |
| ! | AATCGCAAACCAAAATAATT+AGG | + | tig0030514:27535-27554 | None:intergenic | 25.0% |
| !!! | TGTTTTCCTTTGATTTTATC+AGG | + | tig0030514:27862-27881 | None:intergenic | 25.0% |
| ! | TATTTGTGAGATACTAAACT+GGG | + | tig0030514:28166-28185 | None:intergenic | 25.0% |
| ! | TTATTTGTGAGATACTAAAC+TGG | + | tig0030514:28167-28186 | None:intergenic | 25.0% |
| ! | AAAAATAGCATGGAGTAATT+TGG | + | tig0030514:28195-28214 | None:intergenic | 25.0% |
| ! | TCTACAGTATAAAAATAGCA+TGG | + | tig0030514:28205-28224 | None:intergenic | 25.0% |
| ! | ATTATAACTTAGGGACTAAA+GGG | - | tig0030514:28239-28258 | Msa1443740:intron | 25.0% |
| !!! | TATGTTGATTGAGTTTTTGA+AGG | - | tig0030514:28628-28647 | Msa1443740:intron | 25.0% |
| ! | ACAGTACCATGTTATATAAT+GGG | + | tig0030514:28708-28727 | None:intergenic | 25.0% |
| ! | TTCTTATTATGTTTATCTGC+AGG | - | tig0030514:29082-29101 | Msa1443740:intron | 25.0% |
| !! | CAAAATGGAATTTTCAGAAT+CGG | + | tig0030514:29152-29171 | None:intergenic | 25.0% |
| ! | AATTATAAAGGACGTTACTT+GGG | + | tig0030514:29191-29210 | None:intergenic | 25.0% |
| !!! | CGTAGATTTTTTTATGAAAC+TGG | - | tig0030514:29259-29278 | Msa1443740:intron | 25.0% |
| !! | AGAACAAATAGCCTTTAAAA+CGG | + | tig0030514:29381-29400 | None:intergenic | 25.0% |
| ! | AAACAGACTTTCTAATAACA+CGG | - | tig0030514:29621-29640 | Msa1443740:intron | 25.0% |
| !! | ACGCAAAATTGATTTCTAAA+GGG | - | tig0030514:29806-29825 | Msa1443740:CDS | 25.0% |
| ! | AAACAAGAACGTGTAAATTT+AGG | + | tig0030514:30948-30967 | None:intergenic | 25.0% |
| !! | AAATTTAGAATGTTCTTGGA+AGG | - | tig0030514:31536-31555 | Msa1443740:five_prime_UTR | 25.0% |
| !!! | TGCTTTTTTCACTTTTATTC+TGG | - | tig0030514:31682-31701 | Msa1443740:five_prime_UTR | 25.0% |
| TTTCAAGGTGGAATTATAGT+TGG | + | tig0030514:27704-27723 | None:intergenic | 30.0% | |
| ! | AAGAAGAGATGAAGTTTTTG+TGG | - | tig0030514:27755-27774 | Msa1443740:three_prime_UTR | 30.0% |
| TCAGTACTGTTTATGTTAGT+TGG | - | tig0030514:27784-27803 | Msa1443740:three_prime_UTR | 30.0% | |
| CAGTACTGTTTATGTTAGTT+GGG | - | tig0030514:27785-27804 | Msa1443740:three_prime_UTR | 30.0% | |
| ACTTCACCTGATAAAATCAA+AGG | - | tig0030514:27853-27872 | Msa1443740:exon | 30.0% | |
| CAACCCTTATTGTTATCTTT+AGG | + | tig0030514:27952-27971 | None:intergenic | 30.0% | |
| ATTAAAGTAGCGAAGAATCA+AGG | + | tig0030514:28130-28149 | None:intergenic | 30.0% | |
| TTAGTCCCTCATTATAACTT+AGG | - | tig0030514:28229-28248 | Msa1443740:intron | 30.0% | |
| TAGTCCCTCATTATAACTTA+GGG | - | tig0030514:28230-28249 | Msa1443740:intron | 30.0% | |
| TAGTCCCTAAGTTATAATGA+GGG | + | tig0030514:28237-28256 | None:intergenic | 30.0% | |
| TTAGTCCCTAAGTTATAATG+AGG | + | tig0030514:28238-28257 | None:intergenic | 30.0% | |
| CATTATAACTTAGGGACTAA+AGG | - | tig0030514:28238-28257 | Msa1443740:intron | 30.0% | |
| ! | AGATTGTTTCTTTGCTTTGA+AGG | - | tig0030514:28307-28326 | Msa1443740:intron | 30.0% |
| ! | GCTCTTATTGGAAAAACTTT+TGG | - | tig0030514:28464-28483 | Msa1443740:intron | 30.0% |
| !! | TGAGTTTTTGAAGGATTTCA+AGG | - | tig0030514:28637-28656 | Msa1443740:intron | 30.0% |
| !! | GAGTTTTTGAAGGATTTCAA+GGG | - | tig0030514:28638-28657 | Msa1443740:intron | 30.0% |
| TTACACCCCATTATATAACA+TGG | - | tig0030514:28699-28718 | Msa1443740:intron | 30.0% | |
| CAGTACCATGTTATATAATG+GGG | + | tig0030514:28707-28726 | None:intergenic | 30.0% | |
| GACAGTACCATGTTATATAA+TGG | + | tig0030514:28709-28728 | None:intergenic | 30.0% | |
| ATGTGGTTGTTGAAAATTTG+AGG | - | tig0030514:28837-28856 | Msa1443740:intron | 30.0% | |
| !!! | TTGTACTTTTTCTCCTTCAT+CGG | + | tig0030514:28947-28966 | None:intergenic | 30.0% |
| ATCTTGCTCTTCTTTCAAAA+TGG | + | tig0030514:29167-29186 | None:intergenic | 30.0% | |
| CAATTATAAAGGACGTTACT+TGG | + | tig0030514:29192-29211 | None:intergenic | 30.0% | |
| !!! | ATGAAACTGGTTTTGTAGAT+TGG | - | tig0030514:29272-29291 | Msa1443740:intron | 30.0% |
| !!! | TGAAACTGGTTTTGTAGATT+GGG | - | tig0030514:29273-29292 | Msa1443740:intron | 30.0% |
| !!! | GTTTTAAAGGCTATTTGTTC+TGG | - | tig0030514:29380-29399 | Msa1443740:intron | 30.0% |
| TTTACTTACCTTTGGTACAA+GGG | - | tig0030514:29451-29470 | Msa1443740:intron | 30.0% | |
| TACAATGTTAAATATCTGCC+AGG | - | tig0030514:29672-29691 | Msa1443740:CDS | 30.0% | |
| ! | AATCAATTTTGCGTGCATAA+AGG | + | tig0030514:29800-29819 | None:intergenic | 30.0% |
| ! | CACGCAAAATTGATTTCTAA+AGG | - | tig0030514:29805-29824 | Msa1443740:intron | 30.0% |
| ACACATATTGTTGTGTAAAC+AGG | - | tig0030514:30161-30180 | Msa1443740:intron | 30.0% | |
| GATGGTGTAAAAAATTGTGA+AGG | - | tig0030514:30228-30247 | Msa1443740:intron | 30.0% | |
| TGTAAAAAATTGTGAAGGTG+AGG | - | tig0030514:30233-30252 | Msa1443740:intron | 30.0% | |
| GTAAAAAATTGTGAAGGTGA+GGG | - | tig0030514:30234-30253 | Msa1443740:intron | 30.0% | |
| !! | ATATTTTGGACAAAAGAGAG+AGG | + | tig0030514:30525-30544 | None:intergenic | 30.0% |
| ! | AGAGAGGAGATAACATATTT+TGG | + | tig0030514:30539-30558 | None:intergenic | 30.0% |
| ! | TTTATAGTGGAAAACTCACT+AGG | + | tig0030514:30716-30735 | None:intergenic | 30.0% |
| TGTATACAACTCACTTATAC+AGG | + | tig0030514:30906-30925 | None:intergenic | 30.0% | |
| TTACCTGTAGATTATACAGT+AGG | + | tig0030514:31012-31031 | None:intergenic | 30.0% | |
| !!! | GCTTTTTGGGTTATTTTGAT+TGG | - | tig0030514:31063-31082 | Msa1443740:intron | 30.0% |
| !! | TCTCAGTTTGGTGATTTTAT+TGG | - | tig0030514:31156-31175 | Msa1443740:intron | 30.0% |
| !! | CTCAGTTTGGTGATTTTATT+GGG | - | tig0030514:31157-31176 | Msa1443740:intron | 30.0% |
| AAAAGGCTCAGAATTCTAAA+TGG | + | tig0030514:31473-31492 | None:intergenic | 30.0% | |
| ATATTATTTCACTGCTCAGT+TGG | - | tig0030514:31652-31671 | Msa1443740:five_prime_UTR | 30.0% | |
| TATTATTTCACTGCTCAGTT+GGG | - | tig0030514:31653-31672 | Msa1443740:five_prime_UTR | 30.0% | |
| TGTTGCGTGAATTTGTATTT+AGG | - | tig0030514:31706-31725 | Msa1443740:five_prime_UTR | 30.0% | |
| TAATTAGGGAGTCTACCAAA+GGG | + | tig0030514:27520-27539 | None:intergenic | 35.0% | |
| ATAATTAGGGAGTCTACCAA+AGG | + | tig0030514:27521-27540 | None:intergenic | 35.0% | |
| ! | GGTAGACTCCCTAATTATTT+TGG | - | tig0030514:27523-27542 | Msa1443740:three_prime_UTR | 35.0% |
| AAGGTGGAATTATAGTTGGT+GGG | + | tig0030514:27700-27719 | None:intergenic | 35.0% | |
| CATCTCTTCTTTCTTCTGAT+GGG | + | tig0030514:27746-27765 | None:intergenic | 35.0% | |
| TCATCTCTTCTTTCTTCTGA+TGG | + | tig0030514:27747-27766 | None:intergenic | 35.0% | |
| ! | AAGAGATGAAGTTTTTGTGG+CGG | - | tig0030514:27758-27777 | Msa1443740:three_prime_UTR | 35.0% |
| TATGTTAGTTGGGATGTCAA+CGG | - | tig0030514:27795-27814 | Msa1443740:three_prime_UTR | 35.0% | |
| !! | AACTTTGGGATTCCTCAATA+CGG | - | tig0030514:27898-27917 | Msa1443740:CDS | 35.0% |
| AGCAAAGAAACAATCTGCAA+AGG | + | tig0030514:28303-28322 | None:intergenic | 35.0% | |
| !! | GTTTCTTTGCTTTGAAGGTT+TGG | - | tig0030514:28312-28331 | Msa1443740:intron | 35.0% |
| ! | GTTTTTCCAATAAGAGCAGA+GGG | + | tig0030514:28461-28480 | None:intergenic | 35.0% |
| ! | AGTTTTTCCAATAAGAGCAG+AGG | + | tig0030514:28462-28481 | None:intergenic | 35.0% |
| ! | AACTTTTGGTCAGAAGTTGA+AGG | - | tig0030514:28478-28497 | Msa1443740:intron | 35.0% |
| TGGTCAATGTTAATCTTGAC+TGG | - | tig0030514:28522-28541 | Msa1443740:intron | 35.0% | |
| AAAAGAAACCGAAAAGCCTT+GGG | - | tig0030514:28883-28902 | Msa1443740:intron | 35.0% | |
| !!! | TGTACTTTTTCTCCTTCATC+GGG | + | tig0030514:28946-28965 | None:intergenic | 35.0% |
| ! | GAAGGAGAAAAAGTACAACA+AGG | - | tig0030514:28949-28968 | Msa1443740:intron | 35.0% |
| AATGCCGTCATTAAATCTCT+TGG | - | tig0030514:28980-28999 | Msa1443740:intron | 35.0% | |
| CTGACCAAGAGATTTAATGA+CGG | + | tig0030514:28987-29006 | None:intergenic | 35.0% | |
| ! | TTATGTTTTCTTGCAGTCGT+TGG | - | tig0030514:29024-29043 | Msa1443740:CDS | 35.0% |
| GACAACAAGAGTAGGTAATA+TGG | + | tig0030514:29321-29340 | None:intergenic | 35.0% | |
| CTGTTATTGACAACAAGAGT+AGG | + | tig0030514:29329-29348 | None:intergenic | 35.0% | |
| GTCAATAACAGACAATATCG+TGG | - | tig0030514:29338-29357 | Msa1443740:intron | 35.0% | |
| GGTAAGTGTTTACTTACCTT+TGG | - | tig0030514:29443-29462 | Msa1443740:intron | 35.0% | |
| GTTTACTTACCTTTGGTACA+AGG | - | tig0030514:29450-29469 | Msa1443740:intron | 35.0% | |
| AATGAGTGCTTGACAAACAA+CGG | - | tig0030514:29539-29558 | Msa1443740:intron | 35.0% | |
| AATTGAACACCATCAACCAA+GGG | + | tig0030514:29727-29746 | None:intergenic | 35.0% | |
| !! | GTTGATGGTGTTCAATTCAA+AGG | - | tig0030514:29730-29749 | Msa1443740:intron | 35.0% |
| TACAACTTGTGAAGGTGAAA+TGG | - | tig0030514:29762-29781 | Msa1443740:intron | 35.0% | |
| AGAAGTGAAGGCAATAAACA+TGG | + | tig0030514:29847-29866 | None:intergenic | 35.0% | |
| ! | ACATGCATTTTCTGCTTGTT+TGG | - | tig0030514:30043-30062 | Msa1443740:intron | 35.0% |
| TTGTTGTGTAAACAGGATGA+TGG | - | tig0030514:30168-30187 | Msa1443740:intron | 35.0% | |
| CAGAATGAGGATTCTATTCA+TGG | + | tig0030514:30346-30365 | None:intergenic | 35.0% | |
| TAGTACTTCATGCTTCAATC+TGG | - | tig0030514:30485-30504 | Msa1443740:CDS | 35.0% | |
| AGTACTTCATGCTTCAATCT+GGG | - | tig0030514:30486-30505 | Msa1443740:CDS | 35.0% | |
| AATCTCAGCAAGTGAAACAT+TGG | - | tig0030514:30586-30605 | Msa1443740:CDS | 35.0% | |
| !! | GAAACATTGGCTTCTATACT+TGG | - | tig0030514:30599-30618 | Msa1443740:CDS | 35.0% |
| !! | TGTTTTTGCAGCTACATTCA+GGG | + | tig0030514:30823-30842 | None:intergenic | 35.0% |
| AATGTAGCTGCAAAAACACT+TGG | - | tig0030514:30825-30844 | Msa1443740:CDS | 35.0% | |
| ATGTAGCTGCAAAAACACTT+GGG | - | tig0030514:30826-30845 | Msa1443740:CDS | 35.0% | |
| TGGAGATCTTCTGTATATCA+AGG | - | tig0030514:30871-30890 | Msa1443740:CDS | 35.0% | |
| ACTCACTTATACAGGTATCA+TGG | + | tig0030514:30898-30917 | None:intergenic | 35.0% | |
| TCTCCTACTGTATAATCTAC+AGG | - | tig0030514:31006-31025 | Msa1443740:intron | 35.0% | |
| !!! | TTGGGTTATTTTGATTGGCT+TGG | - | tig0030514:31068-31087 | Msa1443740:intron | 35.0% |
| !!! | TGGGTTATTTTGATTGGCTT+GGG | - | tig0030514:31069-31088 | Msa1443740:intron | 35.0% |
| CAACAAAGTAAGCAAGTCAT+GGG | + | tig0030514:31226-31245 | None:intergenic | 35.0% | |
| ACAACAAAGTAAGCAAGTCA+TGG | + | tig0030514:31227-31246 | None:intergenic | 35.0% | |
| !! | TTCTGAAATCAGAGCAATCA+TGG | - | tig0030514:31306-31325 | Msa1443740:CDS | 35.0% |
| ! | CTTTGATGATTGACGTGATT+TGG | + | tig0030514:31367-31386 | None:intergenic | 35.0% |
| AATTCTAAATGGCTCAAGGA+GGG | + | tig0030514:31462-31481 | None:intergenic | 35.0% | |
| TCAGAATTCTAAATGGCTCA+AGG | + | tig0030514:31466-31485 | None:intergenic | 35.0% | |
| ATAAGTTACAACATTGTGCG+TGG | + | tig0030514:31606-31625 | None:intergenic | 35.0% | |
| ACGCACAATGTTGTAACTTA+TGG | - | tig0030514:31605-31624 | Msa1443740:five_prime_UTR | 35.0% | |
| !! | AATGAAGAAGTACCAATGCA+TGG | + | tig0030514:31742-31761 | None:intergenic | 35.0% |
| CAAGGTGGAATTATAGTTGG+TGG | + | tig0030514:27701-27720 | None:intergenic | 40.0% | |
| TCGATCGGTTAATTTCAAGG+TGG | + | tig0030514:27716-27735 | None:intergenic | 40.0% | |
| GACTCGATCGGTTAATTTCA+AGG | + | tig0030514:27719-27738 | None:intergenic | 40.0% | |
| TCTTCCTTCAAATCCAAACC+TGG | - | tig0030514:27991-28010 | Msa1443740:intron | 40.0% | |
| GTAACTAACTTCCACGATCA+AGG | + | tig0030514:28038-28057 | None:intergenic | 40.0% | |
| AGATACTAAACTGGGCATCT+AGG | + | tig0030514:28158-28177 | None:intergenic | 40.0% | |
| AGGGACTAAAGGGATCAAAA+TGG | - | tig0030514:28249-28268 | Msa1443740:intron | 40.0% | |
| GGGACTAAAGGGATCAAAAT+GGG | - | tig0030514:28250-28269 | Msa1443740:intron | 40.0% | |
| GGTGTGTCCATAGTAATCAA+GGG | + | tig0030514:28392-28411 | None:intergenic | 40.0% | |
| ACAATACCCTCTGCTCTTAT+TGG | - | tig0030514:28452-28471 | Msa1443740:intron | 40.0% | |
| TGTTAATCTTGACTGGAGAG+AGG | - | tig0030514:28529-28548 | Msa1443740:intron | 40.0% | |
| ACCAATAGTAACGATGAGTG+TGG | - | tig0030514:28593-28612 | Msa1443740:intron | 40.0% | |
| TCCACACTCATCGTTACTAT+TGG | + | tig0030514:28597-28616 | None:intergenic | 40.0% | |
| TTACTCAATGTAAACGCGTG+AGG | + | tig0030514:28731-28750 | None:intergenic | 40.0% | |
| AAGTCCCAATGCATAAACCA+TGG | - | tig0030514:28758-28777 | Msa1443740:intron | 40.0% | |
| AGTCCCAATGCATAAACCAT+GGG | - | tig0030514:28759-28778 | Msa1443740:intron | 40.0% | |
| TCTCCCATGGTTTATGCATT+GGG | + | tig0030514:28765-28784 | None:intergenic | 40.0% | |
| ATCTCCCATGGTTTATGCAT+TGG | + | tig0030514:28766-28785 | None:intergenic | 40.0% | |
| CAAAAGAAACCGAAAAGCCT+TGG | - | tig0030514:28882-28901 | Msa1443740:intron | 40.0% | |
| TCAAATTAGATGCCCGATGA+AGG | - | tig0030514:28931-28950 | Msa1443740:intron | 40.0% | |
| TGCAAAGATTGACAAGTGCA+TGG | - | tig0030514:29114-29133 | Msa1443740:intron | 40.0% | |
| GCAAAGATTGACAAGTGCAT+GGG | - | tig0030514:29115-29134 | Msa1443740:intron | 40.0% | |
| ! | GAATTTTCAGAATCGGCATC+AGG | + | tig0030514:29145-29164 | None:intergenic | 40.0% |
| !!! | ACTGGTTTTGTAGATTGGGA+AGG | - | tig0030514:29277-29296 | Msa1443740:intron | 40.0% |
| !!! | CTGGTTTTGTAGATTGGGAA+GGG | - | tig0030514:29278-29297 | Msa1443740:intron | 40.0% |
| CAGACAATATCGTGGTAAAC+TGG | - | tig0030514:29346-29365 | Msa1443740:intron | 40.0% | |
| TATCGTGGTAAACTGGAGAA+AGG | - | tig0030514:29353-29372 | Msa1443740:intron | 40.0% | |
| ! | GGCTATTTGTTCTGGATTTG+AGG | - | tig0030514:29388-29407 | Msa1443740:intron | 40.0% |
| CATTGCTCAAACAAACAGCT+GGG | + | tig0030514:29424-29443 | None:intergenic | 40.0% | |
| GCATATTTCCCTTGTACCAA+AGG | + | tig0030514:29462-29481 | None:intergenic | 40.0% | |
| CACAGGAAATCAGAAGAATG+AGG | + | tig0030514:29505-29524 | None:intergenic | 40.0% | |
| AGCTAATATCACTGCATGCA+AGG | - | tig0030514:29583-29602 | Msa1443740:intron | 40.0% | |
| ATTGAACACCATCAACCAAG+GGG | + | tig0030514:29726-29745 | None:intergenic | 40.0% | |
| GAATTGAACACCATCAACCA+AGG | + | tig0030514:29728-29747 | None:intergenic | 40.0% | |
| GGTGTTCAATTCAAAGGAGA+CGG | - | tig0030514:29736-29755 | Msa1443740:intron | 40.0% | |
| GACGGTTATACAACTTGTGA+AGG | - | tig0030514:29754-29773 | Msa1443740:intron | 40.0% | |
| ACAACACAGCATAGAAGTGA+AGG | + | tig0030514:29859-29878 | None:intergenic | 40.0% | |
| TTCTATGCTGTGTTGTGCAT+AGG | - | tig0030514:29863-29882 | Msa1443740:CDS | 40.0% | |
| TCTATGCTGTGTTGTGCATA+GGG | - | tig0030514:29864-29883 | Msa1443740:CDS | 40.0% | |
| TAATCACGATCCTTTAGCTG+AGG | - | tig0030514:29889-29908 | Msa1443740:CDS | 40.0% | |
| AATCACGATCCTTTAGCTGA+GGG | - | tig0030514:29890-29909 | Msa1443740:CDS | 40.0% | |
| GTTTCTTCTGTGTTTGCAGT+CGG | - | tig0030514:29963-29982 | Msa1443740:intron | 40.0% | |
| AGATCAACAATGGAGGATGT+TGG | - | tig0030514:30003-30022 | Msa1443740:intron | 40.0% | |
| ! | TTGTGTAAACAGGATGATGG+AGG | - | tig0030514:30171-30190 | Msa1443740:intron | 40.0% |
| TTAAATGCCAGTGTCCTACA+GGG | - | tig0030514:30196-30215 | Msa1443740:intron | 40.0% | |
| ATTCAGAAAGCTACAGAGCA+GGG | + | tig0030514:30292-30311 | None:intergenic | 40.0% | |
| TATTCAGAAAGCTACAGAGC+AGG | + | tig0030514:30293-30312 | None:intergenic | 40.0% | |
| !! | GTGTTTTTGCAGCTACATTC+AGG | + | tig0030514:30824-30843 | None:intergenic | 40.0% |
| TGTAGCTGCAAAAACACTTG+GGG | - | tig0030514:30827-30846 | Msa1443740:CDS | 40.0% | |
| GAATTCTAAATGGCTCAAGG+AGG | + | tig0030514:31463-31482 | None:intergenic | 40.0% | |
| GAAGGTGAGATGTATTTCAC+TGG | - | tig0030514:31554-31573 | Msa1443740:five_prime_UTR | 40.0% | |
| TGTGCGTGGAAGATTACATA+TGG | + | tig0030514:31592-31611 | None:intergenic | 40.0% | |
| GGAAAACATGACAGTGCGAT+CGG | - | tig0030514:27874-27893 | Msa1443740:CDS | 45.0% | |
| ACAGTGCGATCGGTAACTTT+GGG | - | tig0030514:27884-27903 | Msa1443740:CDS | 45.0% | |
| ! | TTTGGGATTCCTCAATACGG+TGG | - | tig0030514:27901-27920 | Msa1443740:CDS | 45.0% |
| AGCACCAGGTTTGGATTTGA+AGG | + | tig0030514:27998-28017 | None:intergenic | 45.0% | |
| AACTTCCACGATCAAGGAGA+AGG | + | tig0030514:28032-28051 | None:intergenic | 45.0% | |
| ! | GAAGGTTTGGAATGCTCAGA+AGG | - | tig0030514:28325-28344 | Msa1443740:intron | 45.0% |
| ACTCGTTGCCGATGATATTG+AGG | - | tig0030514:28364-28383 | Msa1443740:CDS | 45.0% | |
| CAAGGGCTCCTCAATATCAT+CGG | + | tig0030514:28375-28394 | None:intergenic | 45.0% | |
| TGAGGAGCCCTTGATTACTA+TGG | - | tig0030514:28382-28401 | Msa1443740:CDS | 45.0% | |
| GGGTGTGTCCATAGTAATCA+AGG | + | tig0030514:28393-28412 | None:intergenic | 45.0% | |
| AGCAGATGAGACATCCTCTT+CGG | + | tig0030514:28414-28433 | None:intergenic | 45.0% | |
| TTGAAGGATGCCATTAGTGC+TGG | - | tig0030514:28494-28513 | Msa1443740:intron | 45.0% | |
| TGAAGGATGCCATTAGTGCT+GGG | - | tig0030514:28495-28514 | Msa1443740:intron | 45.0% | |
| TCATACTCGACACGATCATC+AGG | + | tig0030514:28566-28585 | None:intergenic | 45.0% | |
| ATCGTGTCGAGTATGAGTTG+TGG | - | tig0030514:28570-28589 | Msa1443740:intron | 45.0% | |
| GCAGCACAGATCTTAGAGAA+AGG | - | tig0030514:28662-28681 | Msa1443740:intron | 45.0% | |
| GCACAGATCTTAGAGAAAGG+AGG | - | tig0030514:28665-28684 | Msa1443740:intron | 45.0% | |
| ACTTCAGCACAGGCTATGAT+GGG | - | tig0030514:28810-28829 | Msa1443740:intron | 45.0% | |
| ! | AGGCTATGATGGGAAAGATG+TGG | - | tig0030514:28820-28839 | Msa1443740:intron | 45.0% |
| ! | GAGGCAGCTATGTGTTTTCA+AGG | - | tig0030514:28856-28875 | Msa1443740:intron | 45.0% |
| !! | GCAGCTATGTGTTTTCAAGG+TGG | - | tig0030514:28859-28878 | Msa1443740:intron | 45.0% |
| !!! | GGAGAAAGGTGCCGTTTTAA+AGG | - | tig0030514:29367-29386 | Msa1443740:intron | 45.0% |
| CCATTGCTCAAACAAACAGC+TGG | + | tig0030514:29425-29444 | None:intergenic | 45.0% | |
| CCAGCTGTTTGTTTGAGCAA+TGG | - | tig0030514:29422-29441 | Msa1443740:intron | 45.0% | |
| ATTTGTTTCCACGTCTGCAC+AGG | + | tig0030514:29522-29541 | None:intergenic | 45.0% | |
| TGACAAACAACGGTGGTTGT+TGG | - | tig0030514:29549-29568 | Msa1443740:intron | 45.0% | |
| CGTTGCAAGATCAACAATGG+AGG | - | tig0030514:29996-30015 | Msa1443740:intron | 45.0% | |
| AGAAAATGCATGTCCGTTCC+GGG | + | tig0030514:30036-30055 | None:intergenic | 45.0% | |
| CAGAAAATGCATGTCCGTTC+CGG | + | tig0030514:30037-30056 | None:intergenic | 45.0% | |
| GTTAAATGCCAGTGTCCTAC+AGG | - | tig0030514:30195-30214 | Msa1443740:intron | 45.0% | |
| CTTTAAACCCTGTAGGACAC+TGG | + | tig0030514:30206-30225 | None:intergenic | 45.0% | |
| CAGTGTCCTACAGGGTTTAA+AGG | - | tig0030514:30204-30223 | Msa1443740:intron | 45.0% | |
| CCATCACCTTTAAACCCTGT+AGG | + | tig0030514:30213-30232 | None:intergenic | 45.0% | |
| CCTACAGGGTTTAAAGGTGA+TGG | - | tig0030514:30210-30229 | Msa1443740:intron | 45.0% | |
| TTCAGAAAGCTACAGAGCAG+GGG | + | tig0030514:30291-30310 | None:intergenic | 45.0% | |
| CTCCTCTCTGTTTGTTTCAC+TGG | - | tig0030514:30550-30569 | Msa1443740:CDS | 45.0% | |
| CTCCAGTGAAACAAACAGAG+AGG | + | tig0030514:30555-30574 | None:intergenic | 45.0% | |
| AGAATCTGCAGCTACTTGAC+TGG | + | tig0030514:30651-30670 | None:intergenic | 45.0% | |
| TGCAGATTCTTCGTAGTCCA+TGG | - | tig0030514:30661-30680 | Msa1443740:CDS | 45.0% | |
| GCAGATTCTTCGTAGTCCAT+GGG | - | tig0030514:30662-30681 | Msa1443740:CDS | 45.0% | |
| CACAATGCTTGTTCAACCCA+TGG | + | tig0030514:30681-30700 | None:intergenic | 45.0% | |
| AGCTATGACTGCAGTTGTAG+TGG | - | tig0030514:30851-30870 | Msa1443740:CDS | 45.0% | |
| TACAGGTAAAACTGCCAGTC+AGG | - | tig0030514:31023-31042 | Msa1443740:intron | 45.0% | |
| CAGTCAGGCAAAATCCACTT+GGG | - | tig0030514:31038-31057 | Msa1443740:intron | 45.0% | |
| !!! | AATCCACTTGGGCTGCTTTT+TGG | - | tig0030514:31049-31068 | Msa1443740:intron | 45.0% |
| !!! | ATCCACTTGGGCTGCTTTTT+GGG | - | tig0030514:31050-31069 | Msa1443740:intron | 45.0% |
| !! | ATTGGCTTGGGTATGATTGC+TGG | - | tig0030514:31081-31100 | Msa1443740:intron | 45.0% |
| TCTGCTGCATTCTCTCAGTT+TGG | - | tig0030514:31144-31163 | Msa1443740:intron | 45.0% | |
| !! | GGTGGTTTTGCAGCAATACA+TGG | - | tig0030514:31282-31301 | Msa1443740:CDS | 45.0% |
| ! | CGTGATTTGGAACTTCTGCT+TGG | + | tig0030514:31354-31373 | None:intergenic | 45.0% |
| AGAAAAACAGTCCAGTCTCG+TGG | - | tig0030514:31397-31416 | Msa1443740:CDS | 45.0% | |
| GAAAAACAGTCCAGTCTCGT+GGG | - | tig0030514:31398-31417 | Msa1443740:CDS | 45.0% | |
| GTCTACCAAAGGGTTGGGTT+GGG | + | tig0030514:27510-27529 | None:intergenic | 50.0% | |
| AGTCTACCAAAGGGTTGGGT+TGG | + | tig0030514:27511-27530 | None:intergenic | 50.0% | |
| AGGGAGTCTACCAAAGGGTT+GGG | + | tig0030514:27515-27534 | None:intergenic | 50.0% | |
| TAGGGAGTCTACCAAAGGGT+TGG | + | tig0030514:27516-27535 | None:intergenic | 50.0% | |
| GGTGGAGAAGAACAGCTTGT+CGG | - | tig0030514:27828-27847 | Msa1443740:three_prime_UTR | 50.0% | |
| GACAGTGCGATCGGTAACTT+TGG | - | tig0030514:27883-27902 | Msa1443740:CDS | 50.0% | |
| TCCTCAATACGGTGGTAGCA+TGG | - | tig0030514:27909-27928 | Msa1443740:CDS | 50.0% | |
| CGATCAAGGAGAAGGATGGT+AGG | + | tig0030514:28024-28043 | None:intergenic | 50.0% | |
| ACCATCCTTCTCCTTGATCG+TGG | - | tig0030514:28024-28043 | Msa1443740:intron | 50.0% | |
| TCCACGATCAAGGAGAAGGA+TGG | + | tig0030514:28028-28047 | None:intergenic | 50.0% | |
| ! | GTTTGGAATGCTCAGAAGGC+TGG | - | tig0030514:28329-28348 | Msa1443740:intron | 50.0% |
| TACTATGGACACACCCGAAG+AGG | - | tig0030514:28397-28416 | Msa1443740:CDS | 50.0% | |
| GCAGATGAGACATCCTCTTC+GGG | + | tig0030514:28413-28432 | None:intergenic | 50.0% | |
| GAAGGATGCCATTAGTGCTG+GGG | - | tig0030514:28496-28515 | Msa1443740:intron | 50.0% | |
| ! | TGCCATTAGTGCTGGGGATA+TGG | - | tig0030514:28502-28521 | Msa1443740:intron | 50.0% |
| GACCATATCCCCAGCACTAA+TGG | + | tig0030514:28507-28526 | None:intergenic | 50.0% | |
| TCGACACGATCATCAGGATG+AGG | + | tig0030514:28560-28579 | None:intergenic | 50.0% | |
| GACTTCAGCACAGGCTATGA+TGG | - | tig0030514:28809-28828 | Msa1443740:intron | 50.0% | |
| AAACCGAAAAGCCTTGGGTG+TGG | - | tig0030514:28888-28907 | Msa1443740:intron | 50.0% | |
| TAGATTGGGAAGGGATCACG+CGG | - | tig0030514:29287-29306 | Msa1443740:intron | 50.0% | |
| TCTGATTTCCTGTGCAGACG+TGG | - | tig0030514:29511-29530 | Msa1443740:CDS | 50.0% | |
| GAGTGCTTGACAAACAACGG+TGG | - | tig0030514:29542-29561 | Msa1443740:intron | 50.0% | |
| AAACAACGGTGGTTGTTGGC+AGG | - | tig0030514:29553-29572 | Msa1443740:intron | 50.0% | |
| ATCTGCCAGGATACATTCCG+TGG | - | tig0030514:29685-29704 | Msa1443740:CDS | 50.0% | |
| TCTGCCAGGATACATTCCGT+GGG | - | tig0030514:29686-29705 | Msa1443740:CDS | 50.0% | |
| TGTGAATGCCCCTTGGTTGA+TGG | - | tig0030514:29715-29734 | Msa1443740:intron | 50.0% | |
| CACAGATGTCCCTCAGCTAA+AGG | + | tig0030514:29902-29921 | None:intergenic | 50.0% | |
| ACACAACTACGAGTGCACGT+GGG | + | tig0030514:29936-29955 | None:intergenic | 50.0% | |
| TCTTCTGTGTTTGCAGTCGG+TGG | - | tig0030514:29966-29985 | Msa1443740:intron | 50.0% | |
| TTGTTGATCTTGCAACGCCC+AGG | + | tig0030514:29993-30012 | None:intergenic | 50.0% | |
| ! | GGGCGTTGCAAGATCAACAA+TGG | - | tig0030514:29993-30012 | Msa1443740:intron | 50.0% |
| TCAGAAAGCTACAGAGCAGG+GGG | + | tig0030514:30290-30309 | None:intergenic | 50.0% | |
| !! | CCAAGTGGATTTTGCCTGAC+TGG | + | tig0030514:31040-31059 | None:intergenic | 50.0% |
| CCAGTCAGGCAAAATCCACT+TGG | - | tig0030514:31037-31056 | Msa1443740:intron | 50.0% | |
| AACCCAAAAAGCAGCCCAAG+TGG | + | tig0030514:31055-31074 | None:intergenic | 50.0% | |
| GCTTGGGTATGATTGCTGGA+GGG | - | tig0030514:31085-31104 | Msa1443740:intron | 50.0% | |
| CTTGGGTATGATTGCTGGAG+GGG | - | tig0030514:31086-31105 | Msa1443740:intron | 50.0% | |
| TTGGGTATGATTGCTGGAGG+GGG | - | tig0030514:31087-31106 | Msa1443740:intron | 50.0% | |
| CATGGCACAATATATGCCCC+TGG | - | tig0030514:31324-31343 | Msa1443740:CDS | 50.0% | |
| AACTTCTGCTTGGCTGTCCA+GGG | + | tig0030514:31344-31363 | None:intergenic | 50.0% | |
| TCCAGTCTCGTGGGATTTCA+TGG | - | tig0030514:31407-31426 | Msa1443740:CDS | 50.0% | |
| GGATTTCATGGCGTGTAGCA+TGG | - | tig0030514:31419-31438 | Msa1443740:CDS | 50.0% | |
| GGATGTGTGTTGCCATGCAT+TGG | - | tig0030514:31727-31746 | Msa1443740:five_prime_UTR | 50.0% | |
| !! | CCAAAGGGTTGGGTTGGGTT+TGG | + | tig0030514:27505-27524 | None:intergenic | 55.0% |
| CCAAACCCAACCCAACCCTT+TGG | - | tig0030514:27502-27521 | Msa1443740:three_prime_UTR | 55.0% | |
| ! | CTGATGGGTCTCGACTCGAT+CGG | + | tig0030514:27731-27750 | None:intergenic | 55.0% |
| GATGTCAACGGCGAGATTCG+TGG | - | tig0030514:27807-27826 | Msa1443740:three_prime_UTR | 55.0% | |
| GCCATGCTACCACCGTATTG+AGG | + | tig0030514:27913-27932 | None:intergenic | 55.0% | |
| CAATACGGTGGTAGCATGGC+TGG | - | tig0030514:27913-27932 | Msa1443740:CDS | 55.0% | |
| !! | GGTAGGAAGAGCACCAGGTT+TGG | + | tig0030514:28007-28026 | None:intergenic | 55.0% |
| !! | AGGATGGTAGGAAGAGCACC+AGG | + | tig0030514:28012-28031 | None:intergenic | 55.0% |
| TCAGAAGGCTGGAGCTTCTG+CGG | - | tig0030514:28340-28359 | Msa1443740:CDS | 55.0% | |
| CCATGGGAGATATTGCGCTC+CGG | - | tig0030514:28775-28794 | Msa1443740:intron | 55.0% | |
| CTGAAGTCCTGCTCAGGATC+CGG | + | tig0030514:28797-28816 | None:intergenic | 55.0% | |
| ! | CCACCACACCCAAGGCTTTT+CGG | + | tig0030514:28894-28913 | None:intergenic | 55.0% |
| CGAAAAGCCTTGGGTGTGGT+GGG | - | tig0030514:28892-28911 | Msa1443740:intron | 55.0% | |
| ACATAGTCCCACCACACCCA+AGG | + | tig0030514:28902-28921 | None:intergenic | 55.0% | |
| GGCATTCACATACTCGCCCA+CGG | + | tig0030514:29705-29724 | None:intergenic | 55.0% | |
| GCGAGTATGTGAATGCCCCT+TGG | - | tig0030514:29708-29727 | Msa1443740:intron | 55.0% | |
| CACAACTACGAGTGCACGTG+GGG | + | tig0030514:29935-29954 | None:intergenic | 55.0% | |
| CACACAACTACGAGTGCACG+TGG | + | tig0030514:29937-29956 | None:intergenic | 55.0% | |
| TGTTTGCAGTCGGTGGACCT+GGG | - | tig0030514:29973-29992 | Msa1443740:intron | 55.0% | |
| GAGGATGTTGGCATGATGCC+CGG | - | tig0030514:30015-30034 | Msa1443740:intron | 55.0% | |
| TGTTGGCATGATGCCCGGAA+CGG | - | tig0030514:30020-30039 | Msa1443740:intron | 55.0% | |
| AGAAAGCTACAGAGCAGGGG+GGG | + | tig0030514:30288-30307 | None:intergenic | 55.0% | |
| CAGAAAGCTACAGAGCAGGG+GGG | + | tig0030514:30289-30308 | None:intergenic | 55.0% | |
| GGCTTGGGTATGATTGCTGG+AGG | - | tig0030514:31084-31103 | Msa1443740:intron | 55.0% | |
| ACTTCTGCTTGGCTGTCCAG+GGG | + | tig0030514:31343-31362 | None:intergenic | 55.0% | |
| GAACTTCTGCTTGGCTGTCC+AGG | + | tig0030514:31345-31364 | None:intergenic | 55.0% | |
| GCCATGAAATCCCACGAGAC+TGG | + | tig0030514:31411-31430 | None:intergenic | 55.0% | |
| CATGGCGTGTAGCATGGATG+TGG | - | tig0030514:31425-31444 | Msa1443740:CDS | 55.0% | |
| GTCAACGGCGAGATTCGTGG+TGG | - | tig0030514:27810-27829 | Msa1443740:three_prime_UTR | 60.0% | |
| CCGGAGCGCAATATCTCCCA+TGG | + | tig0030514:28778-28797 | None:intergenic | 60.0% | |
| CCTGTGCTGAAGTCCTGCTC+AGG | + | tig0030514:28803-28822 | None:intergenic | 60.0% | |
| CCTGAGCAGGACTTCAGCAC+AGG | - | tig0030514:28800-28819 | Msa1443740:intron | 60.0% | |
| CCGAAAAGCCTTGGGTGTGG+TGG | - | tig0030514:28891-28910 | Msa1443740:intron | 60.0% | |
| CTCGCCCACGGAATGTATCC+TGG | + | tig0030514:29693-29712 | None:intergenic | 60.0% | |
| GTGTTTGCAGTCGGTGGACC+TGG | - | tig0030514:29972-29991 | Msa1443740:intron | 60.0% | |
| TTGCGCTCCGGATCCTGAGC+AGG | - | tig0030514:28787-28806 | Msa1443740:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030514 | gene | 27472 | 31777 | 27472 | ID=Msa1443740;Name=Msa1443740 |
| tig0030514 | mRNA | 27472 | 31777 | 27472 | ID=Msa1443740-mRNA-1;Parent=Msa1443740;Name=Msa1443740-mRNA-1;_AED=0.08;_eAED=0.08;_QI=291|1|1|1|1|1|11|384|622 |
| tig0030514 | exon | 27472 | 27954 | 27472 | ID=Msa1443740-mRNA-1:exon:14066;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 28112 | 28221 | 28112 | ID=Msa1443740-mRNA-1:exon:14065;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 28338 | 28466 | 28338 | ID=Msa1443740-mRNA-1:exon:14064;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 29000 | 29066 | 29000 | ID=Msa1443740-mRNA-1:exon:14063;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 29185 | 29267 | 29185 | ID=Msa1443740-mRNA-1:exon:14062;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 29474 | 29555 | 29474 | ID=Msa1443740-mRNA-1:exon:14061;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 29645 | 29721 | 29645 | ID=Msa1443740-mRNA-1:exon:14060;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 29806 | 29959 | 29806 | ID=Msa1443740-mRNA-1:exon:14059;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 30057 | 30145 | 30057 | ID=Msa1443740-mRNA-1:exon:14058;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 30248 | 30940 | 30248 | ID=Msa1443740-mRNA-1:exon:14057;Parent=Msa1443740-mRNA-1 |
| tig0030514 | exon | 31201 | 31777 | 31201 | ID=Msa1443740-mRNA-1:exon:14056;Parent=Msa1443740-mRNA-1 |
| tig0030514 | five_prime_UTR | 31487 | 31777 | 31487 | ID=Msa1443740-mRNA-1:five_prime_utr;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 31201 | 31486 | 31201 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 30248 | 30940 | 30248 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 30057 | 30145 | 30057 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 29806 | 29959 | 29806 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 29645 | 29721 | 29645 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 29474 | 29555 | 29474 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 29185 | 29267 | 29185 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 29000 | 29066 | 29000 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 28338 | 28466 | 28338 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 28112 | 28221 | 28112 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | CDS | 27856 | 27954 | 27856 | ID=Msa1443740-mRNA-1:cds;Parent=Msa1443740-mRNA-1 |
| tig0030514 | three_prime_UTR | 27472 | 27855 | 27472 | ID=Msa1443740-mRNA-1:three_prime_utr;Parent=Msa1443740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
