Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581010 | XP_024639462.2 | 98.246 | 627 | 6 | 2 | 1 | 623 | 1 | 626 | 0.0 | 1271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581010 | sp|P93484|VSR1_PEA | 93.419 | 623 | 34 | 2 | 5 | 623 | 4 | 623 | 0.0 | 1213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581010 | A0A396HQY9 | 98.246 | 627 | 6 | 2 | 1 | 623 | 1 | 626 | 0.0 | 1271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024400 | Msa0581010 | 0.809288 | 2.037701e-50 | -8.615850e-47 |
| Msa0028620 | Msa0581010 | 0.803157 | 3.985856e-49 | -8.615850e-47 |
| Msa0032080 | Msa0581010 | 0.819925 | 8.988534e-53 | -8.615850e-47 |
| Msa0032100 | Msa0581010 | 0.811532 | 6.678191e-51 | -8.615850e-47 |
| Msa0044000 | Msa0581010 | 0.817557 | 3.100840e-52 | -8.615850e-47 |
| Msa0076290 | Msa0581010 | 0.822260 | 2.604746e-53 | -8.615850e-47 |
| Msa0079070 | Msa0581010 | 0.834899 | 2.294973e-56 | -8.615850e-47 |
| Msa0124320 | Msa0581010 | 0.818628 | 1.774918e-52 | -8.615850e-47 |
| Msa0127650 | Msa0581010 | 0.830734 | 2.485439e-55 | -8.615850e-47 |
| Msa0127800 | Msa0581010 | 0.809614 | 1.734624e-50 | -8.615850e-47 |
| Msa0163510 | Msa0581010 | 0.807459 | 5.002387e-50 | -8.615850e-47 |
| Msa0172080 | Msa0581010 | 0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0204770 | Msa0581010 | 0.800969 | 1.122884e-48 | -8.615850e-47 |
| Msa0211150 | Msa0581010 | 0.814865 | 1.239241e-51 | -8.615850e-47 |
| Msa0219590 | Msa0581010 | 0.828077 | 1.098756e-54 | -8.615850e-47 |
| Msa0221540 | Msa0581010 | 0.804492 | 2.104909e-49 | -8.615850e-47 |
| Msa0458460 | Msa0581010 | 0.818658 | 1.747077e-52 | -8.615850e-47 |
| Msa0468270 | Msa0581010 | 0.806415 | 8.317518e-50 | -8.615850e-47 |
| Msa0478370 | Msa0581010 | 0.817536 | 3.133855e-52 | -8.615850e-47 |
| Msa0243090 | Msa0581010 | 0.811293 | 7.527029e-51 | -8.615850e-47 |
| Msa0263920 | Msa0581010 | 0.803506 | 3.374942e-49 | -8.615850e-47 |
| Msa0287870 | Msa0581010 | 0.800411 | 1.459342e-48 | -8.615850e-47 |
| Msa0509700 | Msa0581010 | 0.803580 | 3.256869e-49 | -8.615850e-47 |
| Msa0522500 | Msa0581010 | 0.807566 | 4.747444e-50 | -8.615850e-47 |
| Msa0527540 | Msa0581010 | 0.814757 | 1.309734e-51 | -8.615850e-47 |
| Msa0530560 | Msa0581010 | 0.813716 | 2.223086e-51 | -8.615850e-47 |
| Msa0581010 | Msa0692980 | 0.827951 | 1.178197e-54 | -8.615850e-47 |
| Msa0581010 | Msa0711030 | 0.887678 | 1.155589e-72 | -8.615850e-47 |
| Msa0581010 | Msa0818060 | 0.812962 | 3.256385e-51 | -8.615850e-47 |
| Msa0581010 | Msa0832340 | 0.805499 | 1.296257e-49 | -8.615850e-47 |
| Msa0581010 | Msa0858390 | 0.825954 | 3.536114e-54 | -8.615850e-47 |
| Msa0581010 | Msa0899970 | 0.801092 | 1.060015e-48 | -8.615850e-47 |
| Msa0581010 | Msa0964310 | 0.805621 | 1.221827e-49 | -8.615850e-47 |
| Msa0581010 | Msa0965080 | 0.812348 | 4.434777e-51 | -8.615850e-47 |
| Msa0581010 | Msa0965290 | 0.815951 | 7.106914e-52 | -8.615850e-47 |
| Msa0581010 | Msa0999680 | 0.814421 | 1.553882e-51 | -8.615850e-47 |
| Msa0581010 | Msa1031660 | 0.841215 | 5.438419e-58 | -8.615850e-47 |
| Msa0581010 | Msa1036300 | 0.809736 | 1.632555e-50 | -8.615850e-47 |
| Msa0581010 | Msa1070720 | 0.827244 | 1.741166e-54 | -8.615850e-47 |
| Msa0581010 | Msa1117240 | 0.813147 | 2.965395e-51 | -8.615850e-47 |
| Msa0581010 | Msa1118860 | 0.812818 | 3.500579e-51 | -8.615850e-47 |
| Msa0581010 | Msa1213890 | 0.801943 | 7.092551e-49 | -8.615850e-47 |
| Msa0581010 | Msa1228040 | 0.805974 | 1.029954e-49 | -8.615850e-47 |
| Msa0581010 | Msa1257750 | 0.807358 | 5.256920e-50 | -8.615850e-47 |
| Msa0581010 | Msa1271130 | 0.817889 | 2.609293e-52 | -8.615850e-47 |
| Msa0581010 | Msa1305810 | 0.819612 | 1.060084e-52 | -8.615850e-47 |
| Msa0581010 | Msa1308870 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0581010 | Msa1392980 | 0.802015 | 6.856476e-49 | -8.615850e-47 |
| Msa0581010 | Msa1394380 | 0.800011 | 1.760516e-48 | -8.615850e-47 |
| Msa0581010 | Msa1406490 | 0.804045 | 2.608175e-49 | -8.615850e-47 |
| Msa0581010 | Msa1419690 | 0.829375 | 5.331976e-55 | -8.615850e-47 |
| Msa0581010 | Msa1442920 | 0.813429 | 2.571146e-51 | -8.615850e-47 |
| Msa0581010 | Msa1443740 | 0.987842 | 9.648783e-172 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581010 | MtrunA17_Chr5g0393731 | 98.246 | 627 | 6 | 2 | 1 | 623 | 1 | 626 | 0.0 | 1271 |
| Msa0581010 | MtrunA17_Chr1g0207291 | 88.177 | 609 | 70 | 1 | 17 | 623 | 24 | 632 | 0.0 | 1137 |
| Msa0581010 | MtrunA17_Chr8g0334591 | 66.077 | 622 | 206 | 3 | 1 | 620 | 5 | 623 | 0.0 | 895 |
| Msa0581010 | MtrunA17_Chr7g0244951 | 66.337 | 606 | 196 | 3 | 19 | 620 | 22 | 623 | 0.0 | 872 |
| Msa0581010 | MtrunA17_Chr2g0296671 | 63.443 | 610 | 215 | 4 | 7 | 614 | 8 | 611 | 0.0 | 805 |
| Msa0581010 | MtrunA17_Chr3g0133721 | 75.000 | 44 | 11 | 0 | 17 | 60 | 24 | 67 | 3.63e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581010 | AT2G14740.2 | 84.463 | 605 | 94 | 0 | 19 | 623 | 24 | 628 | 0.0 | 1101 |
| Msa0581010 | AT2G14740.1 | 84.463 | 605 | 94 | 0 | 19 | 623 | 24 | 628 | 0.0 | 1101 |
| Msa0581010 | AT2G14720.1 | 83.553 | 608 | 100 | 0 | 16 | 623 | 21 | 628 | 0.0 | 1094 |
| Msa0581010 | AT2G14720.2 | 83.553 | 608 | 100 | 0 | 16 | 623 | 21 | 628 | 0.0 | 1094 |
| Msa0581010 | AT3G52850.1 | 71.082 | 619 | 175 | 3 | 4 | 621 | 5 | 620 | 0.0 | 932 |
| Msa0581010 | AT2G30290.1 | 66.502 | 609 | 201 | 2 | 4 | 610 | 6 | 613 | 0.0 | 899 |
| Msa0581010 | AT2G30290.2 | 66.502 | 609 | 201 | 2 | 4 | 610 | 6 | 613 | 0.0 | 899 |
| Msa0581010 | AT4G20110.1 | 61.836 | 621 | 222 | 6 | 6 | 618 | 7 | 620 | 0.0 | 822 |
| Msa0581010 | AT1G30900.1 | 62.521 | 603 | 219 | 4 | 9 | 611 | 15 | 610 | 0.0 | 813 |
| Msa0581010 | AT4G20110.2 | 60.960 | 625 | 224 | 8 | 6 | 618 | 7 | 623 | 0.0 | 806 |
| Msa0581010 | AT2G34940.1 | 58.746 | 606 | 242 | 5 | 7 | 612 | 14 | 611 | 0.0 | 765 |
Find 193 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGTACAAATATAGAATT+AGG | 0.152074 | 4_1:-86281653 | Msa0581010:CDS |
| ACAATACCCTCTGCTCTTAT+TGG | 0.161645 | 4_1:-86284315 | Msa0581010:CDS |
| GGTAGACTCCCTAATTATTT+TGG | 0.172210 | 4_1:-86285266 | Msa0581010:five_prime_UTR |
| AATCGCAAACCAAAATAATT+AGG | 0.178784 | 4_1:+86285257 | None:intergenic |
| TTAGAAATTTAGAATGTTCT+TGG | 0.226695 | 4_1:-86281236 | Msa0581010:three_prime_UTR |
| CTTTGATGATTGACGTGATT+TGG | 0.258850 | 4_1:+86281404 | None:intergenic |
| ATCTTGCTCTTCTTTCAAAA+TGG | 0.266286 | 4_1:+86283604 | None:intergenic |
| TCAGTACTGTTTATGTTAGT+TGG | 0.267130 | 4_1:-86284992 | Msa0581010:CDS |
| TGTTGCGTGAATTTGTATTT+AGG | 0.271625 | 4_1:-86281062 | Msa0581010:three_prime_UTR |
| GTTTCTTTGCTTTGAAGGTT+TGG | 0.273783 | 4_1:-86284455 | Msa0581010:CDS |
| CAACCCTTATTGTTATCTTT+AGG | 0.286744 | 4_1:+86284827 | None:intergenic |
| CCAAAGGGTTGGGTTGGGTT+TGG | 0.299424 | 4_1:+86285287 | None:intergenic |
| TGCCATTAGTGCTGGGGATA+TGG | 0.300176 | 4_1:-86284265 | Msa0581010:CDS |
| GAACATTCTAAATTTCTAAT+AGG | 0.301786 | 4_1:+86281240 | None:intergenic |
| ACGCACAATGTTGTAACTTA+TGG | 0.303838 | 4_1:-86281163 | Msa0581010:three_prime_UTR |
| GAACTTCTGCTTGGCTGTCC+AGG | 0.305137 | 4_1:+86281426 | None:intergenic |
| CAGTGTCCTACAGGGTTTAA+AGG | 0.310747 | 4_1:-86282564 | Msa0581010:CDS |
| CAGAAAATGCATGTCCGTTC+CGG | 0.315826 | 4_1:+86282734 | None:intergenic |
| TGAGGAGCCCTTGATTACTA+TGG | 0.317046 | 4_1:-86284385 | Msa0581010:CDS |
| GTCTACCAAAGGGTTGGGTT+GGG | 0.318897 | 4_1:+86285282 | None:intergenic |
| GACAGTACCATGTTATATAA+TGG | 0.319024 | 4_1:+86284061 | None:intergenic |
| ATTGGCTTGGGTATGATTGC+TGG | 0.324545 | 4_1:-86281687 | Msa0581010:CDS |
| AGATTGTTTCTTTGCTTTGA+AGG | 0.325371 | 4_1:-86284460 | Msa0581010:CDS |
| TCATCTCTTCTTTCTTCTGA+TGG | 0.327260 | 4_1:+86285032 | None:intergenic |
| GTGTTTGCAGTCGGTGGACC+TGG | 0.328777 | 4_1:-86282796 | Msa0581010:intron |
| ATATTACAGTACTAAATAAA+AGG | 0.342493 | 4_1:+86281281 | None:intergenic |
| CAGACAATATCGTGGTAAAC+TGG | 0.346061 | 4_1:-86283422 | Msa0581010:CDS |
| TTATCCTAAAGATAACAATA+AGG | 0.350659 | 4_1:-86284831 | Msa0581010:CDS |
| GACAACAAGAGTAGGTAATA+TGG | 0.353003 | 4_1:+86283450 | None:intergenic |
| AAAAGGCTCAGAATTCTAAA+TGG | 0.356615 | 4_1:+86281298 | None:intergenic |
| ACAGTACCATGTTATATAAT+GGG | 0.356620 | 4_1:+86284062 | None:intergenic |
| GGCTATTTGTTCTGGATTTG+AGG | 0.358996 | 4_1:-86283380 | Msa0581010:CDS |
| CATCTCTTCTTTCTTCTGAT+GGG | 0.365657 | 4_1:+86285033 | None:intergenic |
| GACCATATCCCCAGCACTAA+TGG | 0.375726 | 4_1:+86284263 | None:intergenic |
| TCCAGTCTCGTGGGATTTCA+TGG | 0.390836 | 4_1:-86281361 | Msa0581010:three_prime_UTR |
| TCTCCCATGGTTTATGCATT+GGG | 0.390836 | 4_1:+86284005 | None:intergenic |
| ATCGCAAACCAAAATAATTA+GGG | 0.392408 | 4_1:+86285258 | None:intergenic |
| ATCTCCCATGGTTTATGCAT+TGG | 0.396833 | 4_1:+86284004 | None:intergenic |
| AACTTCTGCTTGGCTGTCCA+GGG | 0.402153 | 4_1:+86281427 | None:intergenic |
| GACAGTGCGATCGGTAACTT+TGG | 0.403999 | 4_1:-86284893 | Msa0581010:CDS |
| TATCCTAAAGATAACAATAA+GGG | 0.408259 | 4_1:-86284830 | Msa0581010:CDS |
| AGAAAATGCATGTCCGTTCC+GGG | 0.412062 | 4_1:+86282735 | None:intergenic |
| TCCACACTCATCGTTACTAT+TGG | 0.418802 | 4_1:+86284173 | None:intergenic |
| TGTATACAACTCACTTATAC+AGG | 0.418882 | 4_1:+86281865 | None:intergenic |
| AGCAGATGAGACATCCTCTT+CGG | 0.422782 | 4_1:+86284356 | None:intergenic |
| AGCACCAGGTTTGGATTTGA+AGG | 0.425579 | 4_1:+86284778 | None:intergenic |
| CAGTACTGTTTATGTTAGTT+GGG | 0.425701 | 4_1:-86284991 | Msa0581010:CDS |
| GACTCGATCGGTTAATTTCA+AGG | 0.427106 | 4_1:+86285060 | None:intergenic |
| TATTATTTCACTGCTCAGTT+GGG | 0.428197 | 4_1:-86281115 | Msa0581010:three_prime_UTR |
| TACAGGTAAAACTGCCAGTC+AGG | 0.431110 | 4_1:-86281745 | Msa0581010:intron |
| GACTTCAGCACAGGCTATGA+TGG | 0.431165 | 4_1:-86283958 | Msa0581010:CDS |
| GTTAAATGCCAGTGTCCTAC+AGG | 0.432639 | 4_1:-86282573 | Msa0581010:CDS |
| CTGAAGTCCTGCTCAGGATC+CGG | 0.438824 | 4_1:+86283973 | None:intergenic |
| GGTAGGAAGAGCACCAGGTT+TGG | 0.440524 | 4_1:+86284769 | None:intergenic |
| ATATTATTTCACTGCTCAGT+TGG | 0.441042 | 4_1:-86281116 | Msa0581010:three_prime_UTR |
| TTGGGTATGATTGCTGGAGG+GGG | 0.442632 | 4_1:-86281681 | Msa0581010:CDS |
| CTTGGGTATGATTGCTGGAG+GGG | 0.451243 | 4_1:-86281682 | Msa0581010:CDS |
| AGTCTACCAAAGGGTTGGGT+TGG | 0.459216 | 4_1:+86285281 | None:intergenic |
| AGGGAGTCTACCAAAGGGTT+GGG | 0.459568 | 4_1:+86285277 | None:intergenic |
| GCAGATGAGACATCCTCTTC+GGG | 0.459853 | 4_1:+86284357 | None:intergenic |
| TTGAAGGATGCCATTAGTGC+TGG | 0.462509 | 4_1:-86284273 | Msa0581010:CDS |
| CGTGATTTGGAACTTCTGCT+TGG | 0.463555 | 4_1:+86281417 | None:intergenic |
| GTTTGGAATGCTCAGAAGGC+TGG | 0.467555 | 4_1:-86284438 | Msa0581010:CDS |
| TGTGAATGCCCCTTGGTTGA+TGG | 0.468992 | 4_1:-86283053 | Msa0581010:CDS |
| CCAGTCAGGCAAAATCCACT+TGG | 0.469198 | 4_1:-86281731 | Msa0581010:CDS |
| CAAAAGAAACCGAAAAGCCT+TGG | 0.473973 | 4_1:-86283885 | Msa0581010:CDS |
| CCAAACCCAACCCAACCCTT+TGG | 0.474453 | 4_1:-86285287 | Msa0581010:five_prime_UTR |
| GCCATGAAATCCCACGAGAC+TGG | 0.474517 | 4_1:+86281360 | None:intergenic |
| TCATACTCGACACGATCATC+AGG | 0.477928 | 4_1:+86284204 | None:intergenic |
| TCAAATTAGATGCCCGATGA+AGG | 0.478586 | 4_1:-86283836 | Msa0581010:CDS |
| CAATACGGTGGTAGCATGGC+TGG | 0.479746 | 4_1:-86284863 | Msa0581010:CDS |
| ACAGTGCGATCGGTAACTTT+GGG | 0.480816 | 4_1:-86284892 | Msa0581010:CDS |
| GTTGATGGTGTTCAATTCAA+AGG | 0.482669 | 4_1:-86283038 | Msa0581010:CDS |
| CAAGGTGGAATTATAGTTCG+TGG | 0.483642 | 4_1:+86285078 | None:intergenic |
| CCATTGCTCAAACAAACAGC+TGG | 0.487515 | 4_1:+86283346 | None:intergenic |
| GGGTGTGTCCATAGTAATCA+AGG | 0.488151 | 4_1:+86284377 | None:intergenic |
| TGGTCAATGTTAATCTTGAC+TGG | 0.491505 | 4_1:-86284245 | Msa0581010:CDS |
| GAAGGTGAGATGTATTTCAC+TGG | 0.492479 | 4_1:-86281214 | Msa0581010:three_prime_UTR |
| GAAGGTTTGGAATGCTCAGA+AGG | 0.501562 | 4_1:-86284442 | Msa0581010:CDS |
| TTCTGAAATCAGAGCAATCA+TGG | 0.503663 | 4_1:-86281462 | Msa0581010:CDS |
| AAAAGAAACCGAAAAGCCTT+GGG | 0.504812 | 4_1:-86283884 | Msa0581010:CDS |
| GGATGTGTGTTGCCATGCAT+TGG | 0.505041 | 4_1:-86281041 | Msa0581010:three_prime_UTR |
| GTAACTAACTTCCACGATCA+AGG | 0.505995 | 4_1:+86284738 | None:intergenic |
| TGTGTACAAATATAGAATTA+GGG | 0.507429 | 4_1:-86281652 | Msa0581010:intron |
| GCTTGGGTATGATTGCTGGA+GGG | 0.509710 | 4_1:-86281683 | Msa0581010:CDS |
| AATGCCGTCATTAAATCTCT+TGG | 0.510279 | 4_1:-86283787 | Msa0581010:intron |
| GGCTTGGGTATGATTGCTGG+AGG | 0.513936 | 4_1:-86281684 | Msa0581010:CDS |
| TAGGGAGTCTACCAAAGGGT+TGG | 0.517105 | 4_1:+86285276 | None:intergenic |
| TTGCGCTCCGGATCCTGAGC+AGG | 0.517442 | 4_1:-86283980 | Msa0581010:CDS |
| AAACAACGGTGGTTGTTGGC+AGG | 0.520508 | 4_1:-86283215 | Msa0581010:CDS |
| TTGTTGATCTTGCAACGCCC+AGG | 0.522495 | 4_1:+86282778 | None:intergenic |
| ATGTGGTTGTTGAAAATTTG+AGG | 0.522629 | 4_1:-86283930 | Msa0581010:CDS |
| AGAACAAATAGCCTTTAAAA+CGG | 0.523531 | 4_1:+86283390 | None:intergenic |
| TGTGCGTGGAAGATTACATA+TGG | 0.526737 | 4_1:+86281179 | None:intergenic |
| TCTTCCTTCAAATCCAAACC+TGG | 0.527152 | 4_1:-86284782 | Msa0581010:CDS |
| AACTTTGGGATTCCTCAATA+CGG | 0.529300 | 4_1:-86284878 | Msa0581010:CDS |
| CCGAAAAGCCTTGGGTGTGG+TGG | 0.530784 | 4_1:-86283876 | Msa0581010:CDS |
| TGAAGGATGCCATTAGTGCT+GGG | 0.532526 | 4_1:-86284272 | Msa0581010:CDS |
| GATGTCAACGGCGAGATTCG+TGG | 0.533817 | 4_1:-86284969 | Msa0581010:CDS |
| CCTGTGCTGAAGTCCTGCTC+AGG | 0.540657 | 4_1:+86283967 | None:intergenic |
| TGGAGATCTTCTGTATATCA+AGG | 0.544120 | 4_1:-86281897 | Msa0581010:CDS |
| TCCTCAATACGGTGGTAGCA+TGG | 0.544648 | 4_1:-86284867 | Msa0581010:CDS |
| AAATTTAGAATGTTCTTGGA+AGG | 0.544801 | 4_1:-86281232 | Msa0581010:three_prime_UTR |
| TGCAAAGATTGACAAGTGCA+TGG | 0.545637 | 4_1:-86283654 | Msa0581010:CDS |
| ACTCACTTATACAGGTATCA+TGG | 0.546171 | 4_1:+86281873 | None:intergenic |
| AAGGTGGAATTATAGTTCGT+GGG | 0.552659 | 4_1:+86285079 | None:intergenic |
| GAGGATGTTGGCATGATGCC+CGG | 0.553226 | 4_1:-86282753 | Msa0581010:CDS |
| GCCATGCTACCACCGTATTG+AGG | 0.554564 | 4_1:+86284866 | None:intergenic |
| GGATTTCATGGCGTGTAGCA+TGG | 0.556572 | 4_1:-86281349 | Msa0581010:three_prime_UTR |
| CTGTTATTGACAACAAGAGT+AGG | 0.558861 | 4_1:+86283442 | None:intergenic |
| GGTGGAGAAGAACAGCTTGT+CGG | 0.558947 | 4_1:-86284948 | Msa0581010:CDS |
| TGACAAACAACGGTGGTTGT+TGG | 0.559077 | 4_1:-86283219 | Msa0581010:CDS |
| CCTGAGCAGGACTTCAGCAC+AGG | 0.560984 | 4_1:-86283967 | Msa0581010:CDS |
| ACTCGTTGCCGATGATATTG+AGG | 0.563097 | 4_1:-86284403 | Msa0581010:CDS |
| AGCTAATATCACTGCATGCA+AGG | 0.568003 | 4_1:-86283185 | Msa0581010:intron |
| CCTACAGGGTTTAAAGGTGA+TGG | 0.569016 | 4_1:-86282558 | Msa0581010:CDS |
| ACTTCACCTGATAAAATCAA+AGG | 0.570340 | 4_1:-86284923 | Msa0581010:CDS |
| GCAGCACAGATCTTAGAGAA+AGG | 0.570785 | 4_1:-86284105 | Msa0581010:CDS |
| TGTTTGCAGTCGGTGGACCT+GGG | 0.574779 | 4_1:-86282795 | Msa0581010:intron |
| ACTTCAGCACAGGCTATGAT+GGG | 0.575024 | 4_1:-86283957 | Msa0581010:CDS |
| AGATCAACAATGGAGGATGT+TGG | 0.577792 | 4_1:-86282765 | Msa0581010:CDS |
| GGTGTTCAATTCAAAGGAGA+CGG | 0.578646 | 4_1:-86283032 | Msa0581010:CDS |
| CGAAAAGCCTTGGGTGTGGT+GGG | 0.579998 | 4_1:-86283875 | Msa0581010:CDS |
| AGCTATGACTGCAGTTGTAG+TGG | 0.582229 | 4_1:-86281917 | Msa0581010:CDS |
| TATCGTGGTAAACTGGAGAA+AGG | 0.582709 | 4_1:-86283415 | Msa0581010:CDS |
| CAAGGGCTCCTCAATATCAT+CGG | 0.583903 | 4_1:+86284395 | None:intergenic |
| CCATGGGAGATATTGCGCTC+CGG | 0.584021 | 4_1:-86283992 | Msa0581010:CDS |
| TTGTTGTGTAAACAGGATGA+TGG | 0.587216 | 4_1:-86282600 | Msa0581010:intron |
| ACTTCTGCTTGGCTGTCCAG+GGG | 0.591243 | 4_1:+86281428 | None:intergenic |
| CTTTAAACCCTGTAGGACAC+TGG | 0.592362 | 4_1:+86282565 | None:intergenic |
| ACCATCCTTCTCCTTGATCG+TGG | 0.593790 | 4_1:-86284749 | Msa0581010:CDS |
| CCAGCTGTTTGTTTGAGCAA+TGG | 0.595530 | 4_1:-86283346 | Msa0581010:intron |
| GGAAAACATGACAGTGCGAT+CGG | 0.595812 | 4_1:-86284902 | Msa0581010:CDS |
| GCGAGTATGTGAATGCCCCT+TGG | 0.597573 | 4_1:-86283060 | Msa0581010:CDS |
| GAATTGAACACCATCAACCA+AGG | 0.597885 | 4_1:+86283043 | None:intergenic |
| CATGGCACAATATATGCCCC+TGG | 0.598457 | 4_1:-86281444 | Msa0581010:CDS |
| TATGTTAGTTGGGATGTCAA+CGG | 0.599268 | 4_1:-86284981 | Msa0581010:CDS |
| TCAGAATTCTAAATGGCTCA+AGG | 0.599721 | 4_1:+86281305 | None:intergenic |
| ATAATTAGGGAGTCTACCAA+AGG | 0.600804 | 4_1:+86285271 | None:intergenic |
| CCGGAGCGCAATATCTCCCA+TGG | 0.600947 | 4_1:+86283992 | None:intergenic |
| TAATTCTATATTTGTACACA+AGG | 0.601328 | 4_1:+86281655 | None:intergenic |
| ATCTGCCAGGATACATTCCG+TGG | 0.601733 | 4_1:-86283083 | Msa0581010:intron |
| TTTAGCGTGGTGGAGGAGCA+AGG | 0.603264 | 4_1:-86285326 | None:intergenic |
| GCAAAGATTGACAAGTGCAT+GGG | 0.604142 | 4_1:-86283653 | Msa0581010:CDS |
| TAATTAGGGAGTCTACCAAA+GGG | 0.605133 | 4_1:+86285272 | None:intergenic |
| AAACCGAAAAGCCTTGGGTG+TGG | 0.605855 | 4_1:-86283879 | Msa0581010:CDS |
| AACTTCCACGATCAAGGAGA+AGG | 0.607585 | 4_1:+86284744 | None:intergenic |
| GACGGTTATACAACTTGTGA+AGG | 0.609305 | 4_1:-86283014 | Msa0581010:intron |
| AATGAAGAAGTACCAATGCA+TGG | 0.611584 | 4_1:+86281029 | None:intergenic |
| CGATCAAGGAGAAGGATGGT+AGG | 0.611973 | 4_1:+86284752 | None:intergenic |
| TACTATGGACACACCCGAAG+AGG | 0.615995 | 4_1:-86284370 | Msa0581010:CDS |
| CATTGCTCAAACAAACAGCT+GGG | 0.621538 | 4_1:+86283347 | None:intergenic |
| AGGATGGTAGGAAGAGCACC+AGG | 0.624048 | 4_1:+86284764 | None:intergenic |
| CAGTCAGGCAAAATCCACTT+GGG | 0.624354 | 4_1:-86281730 | Msa0581010:CDS |
| AATTCTAAATGGCTCAAGGA+GGG | 0.625106 | 4_1:+86281309 | None:intergenic |
| AATTGAACACCATCAACCAA+GGG | 0.625423 | 4_1:+86283044 | None:intergenic |
| AAGTCCCAATGCATAAACCA+TGG | 0.629265 | 4_1:-86284009 | Msa0581010:CDS |
| TCGACACGATCATCAGGATG+AGG | 0.631218 | 4_1:+86284210 | None:intergenic |
| CATGGCGTGTAGCATGGATG+TGG | 0.633190 | 4_1:-86281343 | Msa0581010:three_prime_UTR |
| TCAGAAGGCTGGAGCTTCTG+CGG | 0.634092 | 4_1:-86284427 | Msa0581010:CDS |
| TGTTAATCTTGACTGGAGAG+AGG | 0.634616 | 4_1:-86284238 | Msa0581010:CDS |
| GGGCGTTGCAAGATCAACAA+TGG | 0.636889 | 4_1:-86282775 | Msa0581010:CDS |
| GGCATTCACATACTCGCCCA+CGG | 0.638497 | 4_1:+86283066 | None:intergenic |
| GTCAATAACAGACAATATCG+TGG | 0.638925 | 4_1:-86283430 | Msa0581010:CDS |
| ACATAGTCCCACCACACCCA+AGG | 0.638979 | 4_1:+86283868 | None:intergenic |
| AGTCCCAATGCATAAACCAT+GGG | 0.639703 | 4_1:-86284008 | Msa0581010:CDS |
| TGTTGGCATGATGCCCGGAA+CGG | 0.640813 | 4_1:-86282748 | Msa0581010:CDS |
| CAGTACCATGTTATATAATG+GGG | 0.643079 | 4_1:+86284063 | None:intergenic |
| TTACACCCCATTATATAACA+TGG | 0.646628 | 4_1:-86284068 | Msa0581010:CDS |
| CTGATGGGTCTCGACTCGAT+CGG | 0.649312 | 4_1:+86285048 | None:intergenic |
| TCCACGATCAAGGAGAAGGA+TGG | 0.649403 | 4_1:+86284748 | None:intergenic |
| TTAAATGCCAGTGTCCTACA+GGG | 0.651425 | 4_1:-86282572 | Msa0581010:CDS |
| GAAGGATGCCATTAGTGCTG+GGG | 0.652649 | 4_1:-86284271 | Msa0581010:CDS |
| AATGAGTGCTTGACAAACAA+CGG | 0.653519 | 4_1:-86283229 | Msa0581010:CDS |
| GCACAGATCTTAGAGAAAGG+AGG | 0.654803 | 4_1:-86284102 | Msa0581010:CDS |
| CCATCACCTTTAAACCCTGT+AGG | 0.658035 | 4_1:+86282558 | None:intergenic |
| CGTTGCAAGATCAACAATGG+AGG | 0.658097 | 4_1:-86282772 | Msa0581010:CDS |
| GGTGTGTCCATAGTAATCAA+GGG | 0.660123 | 4_1:+86284378 | None:intergenic |
| ATAAGTTACAACATTGTGCG+TGG | 0.662906 | 4_1:+86281165 | None:intergenic |
| GAATTCTAAATGGCTCAAGG+AGG | 0.671781 | 4_1:+86281308 | None:intergenic |
| ACCAATAGTAACGATGAGTG+TGG | 0.674003 | 4_1:-86284174 | Msa0581010:CDS |
| TTACTCAATGTAAACGCGTG+AGG | 0.679088 | 4_1:+86284039 | None:intergenic |
| TCTGCCAGGATACATTCCGT+GGG | 0.680496 | 4_1:-86283082 | Msa0581010:intron |
| TTGTGTAAACAGGATGATGG+AGG | 0.686610 | 4_1:-86282597 | Msa0581010:intron |
| TTTGGGATTCCTCAATACGG+TGG | 0.689306 | 4_1:-86284875 | Msa0581010:CDS |
| CTGACCAAGAGATTTAATGA+CGG | 0.696138 | 4_1:+86283783 | None:intergenic |
| GTCAACGGCGAGATTCGTGG+TGG | 0.699652 | 4_1:-86284966 | Msa0581010:CDS |
| AGGCTATGATGGGAAAGATG+TGG | 0.711715 | 4_1:-86283947 | Msa0581010:CDS |
| ATCGTGTCGAGTATGAGTTG+TGG | 0.711953 | 4_1:-86284197 | Msa0581010:CDS |
| TAGATTGGGAAGGGATCACG+CGG | 0.718440 | 4_1:-86283481 | Msa0581010:CDS |
| ATTGAACACCATCAACCAAG+GGG | 0.734010 | 4_1:+86283045 | None:intergenic |
| TCGATCGGTTAATTTCAAGG+TGG | 0.742070 | 4_1:+86285063 | None:intergenic |
| GAGTGCTTGACAAACAACGG+TGG | 0.815477 | 4_1:-86283226 | Msa0581010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTAACTATTAAATTTAT+TGG | - | chr4_1:86283626-86283645 | Msa0581010:CDS | 10.0% |
| !!! | ATTTTAAATGAAATAAAGTT+TGG | + | chr4_1:86283652-86283671 | None:intergenic | 10.0% |
| !! | AATATTATTAATAGAATTGA+TGG | - | chr4_1:86284000-86284019 | Msa0581010:CDS | 10.0% |
| !! | AAATGAAATAATAAATTTGT+TGG | - | chr4_1:86284821-86284840 | Msa0581010:CDS | 10.0% |
| !! | AACTAAAAAAAAAAGAAAGA+AGG | + | chr4_1:86281625-86281644 | None:intergenic | 15.0% |
| !! | AGATAAACATAATAAGAATA+TGG | + | chr4_1:86282640-86282659 | None:intergenic | 15.0% |
| !! | TAAACTAAAAGCAATTATAA+AGG | + | chr4_1:86282763-86282782 | None:intergenic | 15.0% |
| !!! | TAAAATGTTTGTAGTTTTAT+TGG | - | chr4_1:86283666-86283685 | Msa0581010:CDS | 15.0% |
| !! | AAAATATTAAAAACAGAATG+AGG | + | chr4_1:86283919-86283938 | None:intergenic | 15.0% |
| !!! | TTTTCCACTATAAAAAAATT+TGG | - | chr4_1:86284282-86284301 | Msa0581010:CDS | 15.0% |
| !!! | AATTCCAAATTTTTTTATAG+TGG | + | chr4_1:86284289-86284308 | None:intergenic | 15.0% |
| !! | ATATTACAGTACTAAATAAA+AGG | + | chr4_1:86285050-86285069 | None:intergenic | 15.0% |
| !! | TTATCCTAAAGATAACAATA+AGG | - | chr4_1:86281497-86281516 | Msa0581010:intron | 20.0% |
| !! | TATCCTAAAGATAACAATAA+GGG | - | chr4_1:86281498-86281517 | Msa0581010:intron | 20.0% |
| !! | TATTTGTGAGATACTAAATT+GGG | + | chr4_1:86281721-86281740 | None:intergenic | 20.0% |
| !! | TTATTTGTGAGATACTAAAT+TGG | + | chr4_1:86281722-86281741 | None:intergenic | 20.0% |
| !! | ATTTAACATTGTAAGAACAT+AGG | + | chr4_1:86283225-86283244 | None:intergenic | 20.0% |
| !! | AGTAATTCAGTTTCTAATTT+GGG | + | chr4_1:86283701-86283720 | None:intergenic | 20.0% |
| !! | TAGTAATTCAGTTTCTAATT+TGG | + | chr4_1:86283702-86283721 | None:intergenic | 20.0% |
| !! | TAATTCTATATTTGTACACA+AGG | + | chr4_1:86284676-86284695 | None:intergenic | 20.0% |
| !! | TTGTGTACAAATATAGAATT+AGG | - | chr4_1:86284675-86284694 | Msa0581010:intron | 20.0% |
| !! | TGTGTACAAATATAGAATTA+GGG | - | chr4_1:86284676-86284695 | Msa0581010:intron | 20.0% |
| !!! | TGCTTTAGAAATTTATCAAT+TGG | + | chr4_1:86284745-86284764 | None:intergenic | 20.0% |
| !!! | TGAAATAATAAATTTGTTGG+TGG | - | chr4_1:86284824-86284843 | Msa0581010:CDS | 20.0% |
| !! | GAACATTCTAAATTTCTAAT+AGG | + | chr4_1:86285091-86285110 | None:intergenic | 20.0% |
| !!! | TTAGAAATTTAGAATGTTCT+TGG | - | chr4_1:86285092-86285111 | Msa0581010:five_prime_UTR | 20.0% |
| ! | ATCGCAAACCAAAATAATTA+GGG | + | chr4_1:86281073-86281092 | None:intergenic | 25.0% |
| ! | AATCGCAAACCAAAATAATT+AGG | + | chr4_1:86281074-86281093 | None:intergenic | 25.0% |
| !!! | TGTTTTCCTTTGATTTTATC+AGG | + | chr4_1:86281414-86281433 | None:intergenic | 25.0% |
| ! | AAAAATAGCATGGAGTAATT+TGG | + | chr4_1:86281751-86281770 | None:intergenic | 25.0% |
| ! | TCTACAGTATAAAAATAGCA+TGG | + | chr4_1:86281761-86281780 | None:intergenic | 25.0% |
| ! | ATTATAACATAGGGACTAAA+GGG | - | chr4_1:86281795-86281814 | Msa0581010:intron | 25.0% |
| !!! | TATGTTGATTGAGTTTTTGA+AGG | - | chr4_1:86282189-86282208 | Msa0581010:intron | 25.0% |
| ! | ACAGTACCATGTTATATAAT+GGG | + | chr4_1:86282269-86282288 | None:intergenic | 25.0% |
| ! | TTCTTATTATGTTTATCTGC+AGG | - | chr4_1:86282642-86282661 | Msa0581010:intron | 25.0% |
| !! | CAAAATGGAATTTTCAGAAT+CGG | + | chr4_1:86282712-86282731 | None:intergenic | 25.0% |
| ! | AATTATAAAGGACGTTACTT+GGG | + | chr4_1:86282751-86282770 | None:intergenic | 25.0% |
| !!! | CGTAGATTTTTTTATGAAAC+TGG | - | chr4_1:86282819-86282838 | Msa0581010:intron | 25.0% |
| !! | AGAACAAATAGCCTTTAAAA+CGG | + | chr4_1:86282941-86282960 | None:intergenic | 25.0% |
| ! | AAACAGACTTTCTAATAACA+CGG | - | chr4_1:86283181-86283200 | Msa0581010:intron | 25.0% |
| !! | ACGCAAAATTGATTTCTAAA+GGG | - | chr4_1:86283366-86283385 | Msa0581010:CDS | 25.0% |
| ! | AAACAAGAACGTGTAAATTT+AGG | + | chr4_1:86284508-86284527 | None:intergenic | 25.0% |
| !! | AAATTTAGAATGTTCTTGGA+AGG | - | chr4_1:86285096-86285115 | Msa0581010:intron | 25.0% |
| !!! | TGCTTTTTTCACTTTTATTC+TGG | - | chr4_1:86285242-86285261 | Msa0581010:five_prime_UTR | 25.0% |
| ! | AAGAAGAGATGAAGTTTTTG+TGG | - | chr4_1:86281307-86281326 | Msa0581010:three_prime_UTR | 30.0% |
| TCAGTACTGTTTATGTTAGT+TGG | - | chr4_1:86281336-86281355 | Msa0581010:three_prime_UTR | 30.0% | |
| CAGTACTGTTTATGTTAGTT+GGG | - | chr4_1:86281337-86281356 | Msa0581010:three_prime_UTR | 30.0% | |
| ACTTCACCTGATAAAATCAA+AGG | - | chr4_1:86281405-86281424 | Msa0581010:CDS | 30.0% | |
| CAACCCTTATTGTTATCTTT+AGG | + | chr4_1:86281504-86281523 | None:intergenic | 30.0% | |
| ATTAAAGTAGCGAAGAATCA+AGG | + | chr4_1:86281685-86281704 | None:intergenic | 30.0% | |
| TTAGTCCCTCATTATAACAT+AGG | - | chr4_1:86281785-86281804 | Msa0581010:intron | 30.0% | |
| TAGTCCCTCATTATAACATA+GGG | - | chr4_1:86281786-86281805 | Msa0581010:intron | 30.0% | |
| TAGTCCCTATGTTATAATGA+GGG | + | chr4_1:86281793-86281812 | None:intergenic | 30.0% | |
| TTAGTCCCTATGTTATAATG+AGG | + | chr4_1:86281794-86281813 | None:intergenic | 30.0% | |
| CATTATAACATAGGGACTAA+AGG | - | chr4_1:86281794-86281813 | Msa0581010:intron | 30.0% | |
| ! | AGATTGTTTCTTTGCTTTGA+AGG | - | chr4_1:86281868-86281887 | Msa0581010:intron | 30.0% |
| ! | GCTCTTATTGGAAAAACTTT+TGG | - | chr4_1:86282025-86282044 | Msa0581010:intron | 30.0% |
| !! | TGAGTTTTTGAAGGATTTCA+AGG | - | chr4_1:86282198-86282217 | Msa0581010:intron | 30.0% |
| !! | GAGTTTTTGAAGGATTTCAA+GGG | - | chr4_1:86282199-86282218 | Msa0581010:intron | 30.0% |
| TTACACCCCATTATATAACA+TGG | - | chr4_1:86282260-86282279 | Msa0581010:intron | 30.0% | |
| CAGTACCATGTTATATAATG+GGG | + | chr4_1:86282268-86282287 | None:intergenic | 30.0% | |
| GACAGTACCATGTTATATAA+TGG | + | chr4_1:86282270-86282289 | None:intergenic | 30.0% | |
| ATGTGGTTGTTGAAAATTTG+AGG | - | chr4_1:86282398-86282417 | Msa0581010:intron | 30.0% | |
| !!! | TTGTACTTTTTCTCCTTCAT+CGG | + | chr4_1:86282508-86282527 | None:intergenic | 30.0% |
| ATCTTGCTCTTCTTTCAAAA+TGG | + | chr4_1:86282727-86282746 | None:intergenic | 30.0% | |
| CAATTATAAAGGACGTTACT+TGG | + | chr4_1:86282752-86282771 | None:intergenic | 30.0% | |
| !!! | ATGAAACTGGTTTTGTAGAT+TGG | - | chr4_1:86282832-86282851 | Msa0581010:intron | 30.0% |
| !!! | TGAAACTGGTTTTGTAGATT+GGG | - | chr4_1:86282833-86282852 | Msa0581010:intron | 30.0% |
| !!! | GTTTTAAAGGCTATTTGTTC+TGG | - | chr4_1:86282940-86282959 | Msa0581010:intron | 30.0% |
| TTTACTTACCTTTGGTACAA+GGG | - | chr4_1:86283011-86283030 | Msa0581010:intron | 30.0% | |
| TACAATGTTAAATATCTGCC+AGG | - | chr4_1:86283232-86283251 | Msa0581010:CDS | 30.0% | |
| ! | AATCAATTTTGCGTGCATAA+AGG | + | chr4_1:86283360-86283379 | None:intergenic | 30.0% |
| ! | CACGCAAAATTGATTTCTAA+AGG | - | chr4_1:86283365-86283384 | Msa0581010:CDS | 30.0% |
| ACACATATTGTTGTGTAAAC+AGG | - | chr4_1:86283721-86283740 | Msa0581010:intron | 30.0% | |
| GATGGTGTAAAAAATTGTGA+AGG | - | chr4_1:86283788-86283807 | Msa0581010:CDS | 30.0% | |
| TGTAAAAAATTGTGAAGGTG+AGG | - | chr4_1:86283793-86283812 | Msa0581010:CDS | 30.0% | |
| GTAAAAAATTGTGAAGGTGA+GGG | - | chr4_1:86283794-86283813 | Msa0581010:CDS | 30.0% | |
| !! | ATATTTTGGACAAAAGAGAG+AGG | + | chr4_1:86284085-86284104 | None:intergenic | 30.0% |
| ! | AGAGAGGAGATAACATATTT+TGG | + | chr4_1:86284099-86284118 | None:intergenic | 30.0% |
| ! | TTTATAGTGGAAAACTCACT+AGG | + | chr4_1:86284276-86284295 | None:intergenic | 30.0% |
| TGTATACAACTCACTTATAC+AGG | + | chr4_1:86284466-86284485 | None:intergenic | 30.0% | |
| TTACCTGTAGATTATACAGT+AGG | + | chr4_1:86284572-86284591 | None:intergenic | 30.0% | |
| !!! | GCTTTTTGGGTTATTTTGAT+TGG | - | chr4_1:86284623-86284642 | Msa0581010:intron | 30.0% |
| !! | TCTCAGTTTGGTGATTTTAT+TGG | - | chr4_1:86284716-86284735 | Msa0581010:intron | 30.0% |
| !! | CTCAGTTTGGTGATTTTATT+GGG | - | chr4_1:86284717-86284736 | Msa0581010:intron | 30.0% |
| AAAAGGCTCAGAATTCTAAA+TGG | + | chr4_1:86285033-86285052 | None:intergenic | 30.0% | |
| ATATTATTTCACTGCTCAGT+TGG | - | chr4_1:86285212-86285231 | Msa0581010:five_prime_UTR | 30.0% | |
| TATTATTTCACTGCTCAGTT+GGG | - | chr4_1:86285213-86285232 | Msa0581010:five_prime_UTR | 30.0% | |
| TGTTGCGTGAATTTGTATTT+AGG | - | chr4_1:86285266-86285285 | Msa0581010:five_prime_UTR | 30.0% | |
| TAATTAGGGAGTCTACCAAA+GGG | + | chr4_1:86281059-86281078 | None:intergenic | 35.0% | |
| ATAATTAGGGAGTCTACCAA+AGG | + | chr4_1:86281060-86281079 | None:intergenic | 35.0% | |
| ! | GGTAGACTCCCTAATTATTT+TGG | - | chr4_1:86281062-86281081 | Msa0581010:three_prime_UTR | 35.0% |
| AAGGTGGAATTATAGTTCGT+GGG | + | chr4_1:86281252-86281271 | None:intergenic | 35.0% | |
| CATCTCTTCTTTCTTCTGAT+GGG | + | chr4_1:86281298-86281317 | None:intergenic | 35.0% | |
| TCATCTCTTCTTTCTTCTGA+TGG | + | chr4_1:86281299-86281318 | None:intergenic | 35.0% | |
| ! | AAGAGATGAAGTTTTTGTGG+CGG | - | chr4_1:86281310-86281329 | Msa0581010:three_prime_UTR | 35.0% |
| TATGTTAGTTGGGATGTCAA+CGG | - | chr4_1:86281347-86281366 | Msa0581010:three_prime_UTR | 35.0% | |
| !! | AACTTTGGGATTCCTCAATA+CGG | - | chr4_1:86281450-86281469 | Msa0581010:CDS | 35.0% |
| AGATACTAAATTGGGCATCT+AGG | + | chr4_1:86281713-86281732 | None:intergenic | 35.0% | |
| AGCAAAGAAACAATCTGCAA+AGG | + | chr4_1:86281864-86281883 | None:intergenic | 35.0% | |
| !! | GTTTCTTTGCTTTGAAGGTT+TGG | - | chr4_1:86281873-86281892 | Msa0581010:intron | 35.0% |
| ! | GTTTTTCCAATAAGAGCAGA+GGG | + | chr4_1:86282022-86282041 | None:intergenic | 35.0% |
| ! | AGTTTTTCCAATAAGAGCAG+AGG | + | chr4_1:86282023-86282042 | None:intergenic | 35.0% |
| ! | AACTTTTGGTCAGAAGTTGA+AGG | - | chr4_1:86282039-86282058 | Msa0581010:intron | 35.0% |
| TGGTCAATGTTAATCTTGAC+TGG | - | chr4_1:86282083-86282102 | Msa0581010:intron | 35.0% | |
| AAAAGAAACCGAAAAGCCTT+GGG | - | chr4_1:86282444-86282463 | Msa0581010:intron | 35.0% | |
| !!! | TGTACTTTTTCTCCTTCATC+GGG | + | chr4_1:86282507-86282526 | None:intergenic | 35.0% |
| ! | GAAGGAGAAAAAGTACAACA+AGG | - | chr4_1:86282510-86282529 | Msa0581010:intron | 35.0% |
| AATGCCGTCATTAAATCTCT+TGG | - | chr4_1:86282541-86282560 | Msa0581010:CDS | 35.0% | |
| CTGACCAAGAGATTTAATGA+CGG | + | chr4_1:86282548-86282567 | None:intergenic | 35.0% | |
| ! | TTATGTTTTCTTGCAGTCGT+TGG | - | chr4_1:86282584-86282603 | Msa0581010:CDS | 35.0% |
| GACAACAAGAGTAGGTAATA+TGG | + | chr4_1:86282881-86282900 | None:intergenic | 35.0% | |
| CTGTTATTGACAACAAGAGT+AGG | + | chr4_1:86282889-86282908 | None:intergenic | 35.0% | |
| GTCAATAACAGACAATATCG+TGG | - | chr4_1:86282898-86282917 | Msa0581010:intron | 35.0% | |
| GGTAAGTGTTTACTTACCTT+TGG | - | chr4_1:86283003-86283022 | Msa0581010:intron | 35.0% | |
| GTTTACTTACCTTTGGTACA+AGG | - | chr4_1:86283010-86283029 | Msa0581010:intron | 35.0% | |
| AATGAGTGCTTGACAAACAA+CGG | - | chr4_1:86283099-86283118 | Msa0581010:intron | 35.0% | |
| AATTGAACACCATCAACCAA+GGG | + | chr4_1:86283287-86283306 | None:intergenic | 35.0% | |
| !! | GTTGATGGTGTTCAATTCAA+AGG | - | chr4_1:86283290-86283309 | Msa0581010:intron | 35.0% |
| TACAACTTGTGAAGGTGAAA+TGG | - | chr4_1:86283322-86283341 | Msa0581010:intron | 35.0% | |
| AGAAGTGAAGGCAATAAACA+TGG | + | chr4_1:86283407-86283426 | None:intergenic | 35.0% | |
| ! | ACATGCATTTTCTGCTTGTT+TGG | - | chr4_1:86283603-86283622 | Msa0581010:CDS | 35.0% |
| TTGTTGTGTAAACAGGATGA+TGG | - | chr4_1:86283728-86283747 | Msa0581010:intron | 35.0% | |
| CAGAATGAGGATTCTATTCA+TGG | + | chr4_1:86283906-86283925 | None:intergenic | 35.0% | |
| TAGTACTTCATGCTTCAATC+TGG | - | chr4_1:86284045-86284064 | Msa0581010:CDS | 35.0% | |
| AGTACTTCATGCTTCAATCT+GGG | - | chr4_1:86284046-86284065 | Msa0581010:CDS | 35.0% | |
| AATCTCAGCAAGTGAAACAT+TGG | - | chr4_1:86284146-86284165 | Msa0581010:CDS | 35.0% | |
| !! | GAAACATTGGCTTCTATACT+TGG | - | chr4_1:86284159-86284178 | Msa0581010:CDS | 35.0% |
| !! | TGTTTTTGCAGCTACATTCA+GGG | + | chr4_1:86284383-86284402 | None:intergenic | 35.0% |
| AATGTAGCTGCAAAAACACT+TGG | - | chr4_1:86284385-86284404 | Msa0581010:CDS | 35.0% | |
| ATGTAGCTGCAAAAACACTT+GGG | - | chr4_1:86284386-86284405 | Msa0581010:CDS | 35.0% | |
| TGGAGATCTTCTGTATATCA+AGG | - | chr4_1:86284431-86284450 | Msa0581010:CDS | 35.0% | |
| ACTCACTTATACAGGTATCA+TGG | + | chr4_1:86284458-86284477 | None:intergenic | 35.0% | |
| TCTCCTACTGTATAATCTAC+AGG | - | chr4_1:86284566-86284585 | Msa0581010:intron | 35.0% | |
| !!! | TTGGGTTATTTTGATTGGCT+TGG | - | chr4_1:86284628-86284647 | Msa0581010:intron | 35.0% |
| !!! | TGGGTTATTTTGATTGGCTT+GGG | - | chr4_1:86284629-86284648 | Msa0581010:intron | 35.0% |
| CAACAAAGTAAGCAAGTCAT+GGG | + | chr4_1:86284786-86284805 | None:intergenic | 35.0% | |
| ACAACAAAGTAAGCAAGTCA+TGG | + | chr4_1:86284787-86284806 | None:intergenic | 35.0% | |
| !! | TTCTGAAATCAGAGCAATCA+TGG | - | chr4_1:86284866-86284885 | Msa0581010:CDS | 35.0% |
| ! | CTTTGATGATTGACGTGATT+TGG | + | chr4_1:86284927-86284946 | None:intergenic | 35.0% |
| AATTCTAAATGGCTCAAGGA+GGG | + | chr4_1:86285022-86285041 | None:intergenic | 35.0% | |
| TCAGAATTCTAAATGGCTCA+AGG | + | chr4_1:86285026-86285045 | None:intergenic | 35.0% | |
| ATAAGTTACAACATTGTGCG+TGG | + | chr4_1:86285166-86285185 | None:intergenic | 35.0% | |
| ACGCACAATGTTGTAACTTA+TGG | - | chr4_1:86285165-86285184 | Msa0581010:five_prime_UTR | 35.0% | |
| !! | AATGAAGAAGTACCAATGCA+TGG | + | chr4_1:86285302-86285321 | None:intergenic | 35.0% |
| CAAGGTGGAATTATAGTTCG+TGG | + | chr4_1:86281253-86281272 | None:intergenic | 40.0% | |
| TCGATCGGTTAATTTCAAGG+TGG | + | chr4_1:86281268-86281287 | None:intergenic | 40.0% | |
| GACTCGATCGGTTAATTTCA+AGG | + | chr4_1:86281271-86281290 | None:intergenic | 40.0% | |
| TCTTCCTTCAAATCCAAACC+TGG | - | chr4_1:86281546-86281565 | Msa0581010:intron | 40.0% | |
| GTAACTAACTTCCACGATCA+AGG | + | chr4_1:86281593-86281612 | None:intergenic | 40.0% | |
| AGGGACTAAAGGGATCAAAA+TGG | - | chr4_1:86281805-86281824 | Msa0581010:intron | 40.0% | |
| GGGACTAAAGGGATCAAAAT+GGG | - | chr4_1:86281806-86281825 | Msa0581010:intron | 40.0% | |
| GGTGTGTCCATAGTAATCAA+GGG | + | chr4_1:86281953-86281972 | None:intergenic | 40.0% | |
| ACAATACCCTCTGCTCTTAT+TGG | - | chr4_1:86282013-86282032 | Msa0581010:intron | 40.0% | |
| TGTTAATCTTGACTGGAGAG+AGG | - | chr4_1:86282090-86282109 | Msa0581010:intron | 40.0% | |
| ACCAATAGTAACGATGAGTG+TGG | - | chr4_1:86282154-86282173 | Msa0581010:intron | 40.0% | |
| TCCACACTCATCGTTACTAT+TGG | + | chr4_1:86282158-86282177 | None:intergenic | 40.0% | |
| TTACTCAATGTAAACGCGTG+AGG | + | chr4_1:86282292-86282311 | None:intergenic | 40.0% | |
| AAGTCCCAATGCATAAACCA+TGG | - | chr4_1:86282319-86282338 | Msa0581010:intron | 40.0% | |
| AGTCCCAATGCATAAACCAT+GGG | - | chr4_1:86282320-86282339 | Msa0581010:intron | 40.0% | |
| TCTCCCATGGTTTATGCATT+GGG | + | chr4_1:86282326-86282345 | None:intergenic | 40.0% | |
| ATCTCCCATGGTTTATGCAT+TGG | + | chr4_1:86282327-86282346 | None:intergenic | 40.0% | |
| CAAAAGAAACCGAAAAGCCT+TGG | - | chr4_1:86282443-86282462 | Msa0581010:intron | 40.0% | |
| TCAAATTAGATGCCCGATGA+AGG | - | chr4_1:86282492-86282511 | Msa0581010:intron | 40.0% | |
| TGCAAAGATTGACAAGTGCA+TGG | - | chr4_1:86282674-86282693 | Msa0581010:intron | 40.0% | |
| GCAAAGATTGACAAGTGCAT+GGG | - | chr4_1:86282675-86282694 | Msa0581010:intron | 40.0% | |
| ! | GAATTTTCAGAATCGGCATC+AGG | + | chr4_1:86282705-86282724 | None:intergenic | 40.0% |
| !!! | ACTGGTTTTGTAGATTGGGA+AGG | - | chr4_1:86282837-86282856 | Msa0581010:intron | 40.0% |
| !!! | CTGGTTTTGTAGATTGGGAA+GGG | - | chr4_1:86282838-86282857 | Msa0581010:intron | 40.0% |
| CAGACAATATCGTGGTAAAC+TGG | - | chr4_1:86282906-86282925 | Msa0581010:intron | 40.0% | |
| TATCGTGGTAAACTGGAGAA+AGG | - | chr4_1:86282913-86282932 | Msa0581010:intron | 40.0% | |
| ! | GGCTATTTGTTCTGGATTTG+AGG | - | chr4_1:86282948-86282967 | Msa0581010:intron | 40.0% |
| CATTGCTCAAACAAACAGCT+GGG | + | chr4_1:86282984-86283003 | None:intergenic | 40.0% | |
| GCATATTTCCCTTGTACCAA+AGG | + | chr4_1:86283022-86283041 | None:intergenic | 40.0% | |
| CACAGGAAATCAGAAGAATG+AGG | + | chr4_1:86283065-86283084 | None:intergenic | 40.0% | |
| AGCTAATATCACTGCATGCA+AGG | - | chr4_1:86283143-86283162 | Msa0581010:intron | 40.0% | |
| ATTGAACACCATCAACCAAG+GGG | + | chr4_1:86283286-86283305 | None:intergenic | 40.0% | |
| GAATTGAACACCATCAACCA+AGG | + | chr4_1:86283288-86283307 | None:intergenic | 40.0% | |
| GGTGTTCAATTCAAAGGAGA+CGG | - | chr4_1:86283296-86283315 | Msa0581010:intron | 40.0% | |
| GACGGTTATACAACTTGTGA+AGG | - | chr4_1:86283314-86283333 | Msa0581010:intron | 40.0% | |
| ACAACACAGCATAGAAGTGA+AGG | + | chr4_1:86283419-86283438 | None:intergenic | 40.0% | |
| TTCTATGCTGTGTTGTGCAT+AGG | - | chr4_1:86283423-86283442 | Msa0581010:CDS | 40.0% | |
| TCTATGCTGTGTTGTGCATA+GGG | - | chr4_1:86283424-86283443 | Msa0581010:CDS | 40.0% | |
| TAATCACGATCCTTTAGCTG+AGG | - | chr4_1:86283449-86283468 | Msa0581010:CDS | 40.0% | |
| AATCACGATCCTTTAGCTGA+GGG | - | chr4_1:86283450-86283469 | Msa0581010:CDS | 40.0% | |
| GTTTCTTCTGTGTTTGCAGT+CGG | - | chr4_1:86283523-86283542 | Msa0581010:intron | 40.0% | |
| AGATCAACAATGGAGGATGT+TGG | - | chr4_1:86283563-86283582 | Msa0581010:intron | 40.0% | |
| ! | TTGTGTAAACAGGATGATGG+AGG | - | chr4_1:86283731-86283750 | Msa0581010:intron | 40.0% |
| TTAAATGCCAGTGTCCTACA+GGG | - | chr4_1:86283756-86283775 | Msa0581010:intron | 40.0% | |
| ATTCAGAAAGCTACAGAGCA+GGG | + | chr4_1:86283852-86283871 | None:intergenic | 40.0% | |
| TATTCAGAAAGCTACAGAGC+AGG | + | chr4_1:86283853-86283872 | None:intergenic | 40.0% | |
| !! | GTGTTTTTGCAGCTACATTC+AGG | + | chr4_1:86284384-86284403 | None:intergenic | 40.0% |
| TGTAGCTGCAAAAACACTTG+GGG | - | chr4_1:86284387-86284406 | Msa0581010:CDS | 40.0% | |
| GAATTCTAAATGGCTCAAGG+AGG | + | chr4_1:86285023-86285042 | None:intergenic | 40.0% | |
| GAAGGTGAGATGTATTTCAC+TGG | - | chr4_1:86285114-86285133 | Msa0581010:intron | 40.0% | |
| TGTGCGTGGAAGATTACATA+TGG | + | chr4_1:86285152-86285171 | None:intergenic | 40.0% | |
| GGAAAACATGACAGTGCGAT+CGG | - | chr4_1:86281426-86281445 | Msa0581010:CDS | 45.0% | |
| ACAGTGCGATCGGTAACTTT+GGG | - | chr4_1:86281436-86281455 | Msa0581010:CDS | 45.0% | |
| ! | TTTGGGATTCCTCAATACGG+TGG | - | chr4_1:86281453-86281472 | Msa0581010:CDS | 45.0% |
| AGCACCAGGTTTGGATTTGA+AGG | + | chr4_1:86281553-86281572 | None:intergenic | 45.0% | |
| AACTTCCACGATCAAGGAGA+AGG | + | chr4_1:86281587-86281606 | None:intergenic | 45.0% | |
| ! | GAAGGTTTGGAATGCTCAGA+AGG | - | chr4_1:86281886-86281905 | Msa0581010:CDS | 45.0% |
| ACTCGTTGCCGATGATATTG+AGG | - | chr4_1:86281925-86281944 | Msa0581010:CDS | 45.0% | |
| CAAGGGCTCCTCAATATCAT+CGG | + | chr4_1:86281936-86281955 | None:intergenic | 45.0% | |
| TGAGGAGCCCTTGATTACTA+TGG | - | chr4_1:86281943-86281962 | Msa0581010:CDS | 45.0% | |
| GGGTGTGTCCATAGTAATCA+AGG | + | chr4_1:86281954-86281973 | None:intergenic | 45.0% | |
| AGCAGATGAGACATCCTCTT+CGG | + | chr4_1:86281975-86281994 | None:intergenic | 45.0% | |
| TTGAAGGATGCCATTAGTGC+TGG | - | chr4_1:86282055-86282074 | Msa0581010:intron | 45.0% | |
| TGAAGGATGCCATTAGTGCT+GGG | - | chr4_1:86282056-86282075 | Msa0581010:intron | 45.0% | |
| TCATACTCGACACGATCATC+AGG | + | chr4_1:86282127-86282146 | None:intergenic | 45.0% | |
| ATCGTGTCGAGTATGAGTTG+TGG | - | chr4_1:86282131-86282150 | Msa0581010:intron | 45.0% | |
| GCAGCACAGATCTTAGAGAA+AGG | - | chr4_1:86282223-86282242 | Msa0581010:intron | 45.0% | |
| GCACAGATCTTAGAGAAAGG+AGG | - | chr4_1:86282226-86282245 | Msa0581010:intron | 45.0% | |
| ACTTCAGCACAGGCTATGAT+GGG | - | chr4_1:86282371-86282390 | Msa0581010:intron | 45.0% | |
| ! | AGGCTATGATGGGAAAGATG+TGG | - | chr4_1:86282381-86282400 | Msa0581010:intron | 45.0% |
| ! | GAGGCAGCTATGTGTTTTCA+AGG | - | chr4_1:86282417-86282436 | Msa0581010:intron | 45.0% |
| !! | GCAGCTATGTGTTTTCAAGG+TGG | - | chr4_1:86282420-86282439 | Msa0581010:intron | 45.0% |
| !!! | GGAGAAAGGTGCCGTTTTAA+AGG | - | chr4_1:86282927-86282946 | Msa0581010:intron | 45.0% |
| CCATTGCTCAAACAAACAGC+TGG | + | chr4_1:86282985-86283004 | None:intergenic | 45.0% | |
| CCAGCTGTTTGTTTGAGCAA+TGG | - | chr4_1:86282982-86283001 | Msa0581010:intron | 45.0% | |
| ATTTGTTTCCACGTCTGCAC+AGG | + | chr4_1:86283082-86283101 | None:intergenic | 45.0% | |
| TGACAAACAACGGTGGTTGT+TGG | - | chr4_1:86283109-86283128 | Msa0581010:intron | 45.0% | |
| CGTTGCAAGATCAACAATGG+AGG | - | chr4_1:86283556-86283575 | Msa0581010:intron | 45.0% | |
| AGAAAATGCATGTCCGTTCC+GGG | + | chr4_1:86283596-86283615 | None:intergenic | 45.0% | |
| CAGAAAATGCATGTCCGTTC+CGG | + | chr4_1:86283597-86283616 | None:intergenic | 45.0% | |
| GTTAAATGCCAGTGTCCTAC+AGG | - | chr4_1:86283755-86283774 | Msa0581010:intron | 45.0% | |
| CTTTAAACCCTGTAGGACAC+TGG | + | chr4_1:86283766-86283785 | None:intergenic | 45.0% | |
| CAGTGTCCTACAGGGTTTAA+AGG | - | chr4_1:86283764-86283783 | Msa0581010:intron | 45.0% | |
| CCATCACCTTTAAACCCTGT+AGG | + | chr4_1:86283773-86283792 | None:intergenic | 45.0% | |
| CCTACAGGGTTTAAAGGTGA+TGG | - | chr4_1:86283770-86283789 | Msa0581010:intron | 45.0% | |
| TTCAGAAAGCTACAGAGCAG+GGG | + | chr4_1:86283851-86283870 | None:intergenic | 45.0% | |
| CTCCTCTCTGTTTGTTTCAC+TGG | - | chr4_1:86284110-86284129 | Msa0581010:CDS | 45.0% | |
| CTCCAGTGAAACAAACAGAG+AGG | + | chr4_1:86284115-86284134 | None:intergenic | 45.0% | |
| AGAATCTGCAGCTACTTGAC+TGG | + | chr4_1:86284211-86284230 | None:intergenic | 45.0% | |
| TGCAGATTCTTCGTAGTCCA+TGG | - | chr4_1:86284221-86284240 | Msa0581010:CDS | 45.0% | |
| GCAGATTCTTCGTAGTCCAT+GGG | - | chr4_1:86284222-86284241 | Msa0581010:CDS | 45.0% | |
| CACAATGCTTGTTCAACCCA+TGG | + | chr4_1:86284241-86284260 | None:intergenic | 45.0% | |
| AGCTATGACTGCAGTTGTAG+TGG | - | chr4_1:86284411-86284430 | Msa0581010:CDS | 45.0% | |
| TACAGGTAAAACTGCCAGTC+AGG | - | chr4_1:86284583-86284602 | Msa0581010:intron | 45.0% | |
| CAGTCAGGCAAAATCCACTT+GGG | - | chr4_1:86284598-86284617 | Msa0581010:intron | 45.0% | |
| !!! | AATCCACTTGGGCTGCTTTT+TGG | - | chr4_1:86284609-86284628 | Msa0581010:intron | 45.0% |
| !!! | ATCCACTTGGGCTGCTTTTT+GGG | - | chr4_1:86284610-86284629 | Msa0581010:intron | 45.0% |
| !! | ATTGGCTTGGGTATGATTGC+TGG | - | chr4_1:86284641-86284660 | Msa0581010:intron | 45.0% |
| TCTGCTGCATTCTCTCAGTT+TGG | - | chr4_1:86284704-86284723 | Msa0581010:intron | 45.0% | |
| !! | GGTGGTTTTGCAGCAATACA+TGG | - | chr4_1:86284842-86284861 | Msa0581010:CDS | 45.0% |
| ! | CGTGATTTGGAACTTCTGCT+TGG | + | chr4_1:86284914-86284933 | None:intergenic | 45.0% |
| AGAAAAACAGTCCAGTCTCG+TGG | - | chr4_1:86284957-86284976 | Msa0581010:CDS | 45.0% | |
| GAAAAACAGTCCAGTCTCGT+GGG | - | chr4_1:86284958-86284977 | Msa0581010:CDS | 45.0% | |
| GTCTACCAAAGGGTTGGGTT+GGG | + | chr4_1:86281049-86281068 | None:intergenic | 50.0% | |
| AGTCTACCAAAGGGTTGGGT+TGG | + | chr4_1:86281050-86281069 | None:intergenic | 50.0% | |
| AGGGAGTCTACCAAAGGGTT+GGG | + | chr4_1:86281054-86281073 | None:intergenic | 50.0% | |
| TAGGGAGTCTACCAAAGGGT+TGG | + | chr4_1:86281055-86281074 | None:intergenic | 50.0% | |
| GGTGGAGAAGAACAGCTTGT+CGG | - | chr4_1:86281380-86281399 | Msa0581010:exon | 50.0% | |
| GACAGTGCGATCGGTAACTT+TGG | - | chr4_1:86281435-86281454 | Msa0581010:CDS | 50.0% | |
| TCCTCAATACGGTGGTAGCA+TGG | - | chr4_1:86281461-86281480 | Msa0581010:CDS | 50.0% | |
| CGATCAAGGAGAAGGATGGT+AGG | + | chr4_1:86281579-86281598 | None:intergenic | 50.0% | |
| ACCATCCTTCTCCTTGATCG+TGG | - | chr4_1:86281579-86281598 | Msa0581010:intron | 50.0% | |
| TCCACGATCAAGGAGAAGGA+TGG | + | chr4_1:86281583-86281602 | None:intergenic | 50.0% | |
| ! | GTTTGGAATGCTCAGAAGGC+TGG | - | chr4_1:86281890-86281909 | Msa0581010:CDS | 50.0% |
| TACTATGGACACACCCGAAG+AGG | - | chr4_1:86281958-86281977 | Msa0581010:CDS | 50.0% | |
| GCAGATGAGACATCCTCTTC+GGG | + | chr4_1:86281974-86281993 | None:intergenic | 50.0% | |
| GAAGGATGCCATTAGTGCTG+GGG | - | chr4_1:86282057-86282076 | Msa0581010:intron | 50.0% | |
| ! | TGCCATTAGTGCTGGGGATA+TGG | - | chr4_1:86282063-86282082 | Msa0581010:intron | 50.0% |
| GACCATATCCCCAGCACTAA+TGG | + | chr4_1:86282068-86282087 | None:intergenic | 50.0% | |
| TCGACACGATCATCAGGATG+AGG | + | chr4_1:86282121-86282140 | None:intergenic | 50.0% | |
| GACTTCAGCACAGGCTATGA+TGG | - | chr4_1:86282370-86282389 | Msa0581010:intron | 50.0% | |
| AAACCGAAAAGCCTTGGGTG+TGG | - | chr4_1:86282449-86282468 | Msa0581010:intron | 50.0% | |
| TAGATTGGGAAGGGATCACG+CGG | - | chr4_1:86282847-86282866 | Msa0581010:intron | 50.0% | |
| TCTGATTTCCTGTGCAGACG+TGG | - | chr4_1:86283071-86283090 | Msa0581010:CDS | 50.0% | |
| GAGTGCTTGACAAACAACGG+TGG | - | chr4_1:86283102-86283121 | Msa0581010:intron | 50.0% | |
| AAACAACGGTGGTTGTTGGC+AGG | - | chr4_1:86283113-86283132 | Msa0581010:intron | 50.0% | |
| ATCTGCCAGGATACATTCCG+TGG | - | chr4_1:86283245-86283264 | Msa0581010:intron | 50.0% | |
| TCTGCCAGGATACATTCCGT+GGG | - | chr4_1:86283246-86283265 | Msa0581010:intron | 50.0% | |
| TGTGAATGCCCCTTGGTTGA+TGG | - | chr4_1:86283275-86283294 | Msa0581010:intron | 50.0% | |
| CACAGATGTCCCTCAGCTAA+AGG | + | chr4_1:86283462-86283481 | None:intergenic | 50.0% | |
| ACACAACTACGAGTGCACGT+GGG | + | chr4_1:86283496-86283515 | None:intergenic | 50.0% | |
| TCTTCTGTGTTTGCAGTCGG+TGG | - | chr4_1:86283526-86283545 | Msa0581010:intron | 50.0% | |
| TTGTTGATCTTGCAACGCCC+AGG | + | chr4_1:86283553-86283572 | None:intergenic | 50.0% | |
| ! | GGGCGTTGCAAGATCAACAA+TGG | - | chr4_1:86283553-86283572 | Msa0581010:intron | 50.0% |
| TCAGAAAGCTACAGAGCAGG+GGG | + | chr4_1:86283850-86283869 | None:intergenic | 50.0% | |
| !! | CCAAGTGGATTTTGCCTGAC+TGG | + | chr4_1:86284600-86284619 | None:intergenic | 50.0% |
| CCAGTCAGGCAAAATCCACT+TGG | - | chr4_1:86284597-86284616 | Msa0581010:intron | 50.0% | |
| AACCCAAAAAGCAGCCCAAG+TGG | + | chr4_1:86284615-86284634 | None:intergenic | 50.0% | |
| GCTTGGGTATGATTGCTGGA+GGG | - | chr4_1:86284645-86284664 | Msa0581010:intron | 50.0% | |
| CTTGGGTATGATTGCTGGAG+GGG | - | chr4_1:86284646-86284665 | Msa0581010:intron | 50.0% | |
| TTGGGTATGATTGCTGGAGG+GGG | - | chr4_1:86284647-86284666 | Msa0581010:intron | 50.0% | |
| CATGGCACAATATATGCCCC+TGG | - | chr4_1:86284884-86284903 | Msa0581010:CDS | 50.0% | |
| AACTTCTGCTTGGCTGTCCA+GGG | + | chr4_1:86284904-86284923 | None:intergenic | 50.0% | |
| TCCAGTCTCGTGGGATTTCA+TGG | - | chr4_1:86284967-86284986 | Msa0581010:CDS | 50.0% | |
| GGATTTCATGGCGTGTAGCA+TGG | - | chr4_1:86284979-86284998 | Msa0581010:CDS | 50.0% | |
| GGATGTGTGTTGCCATGCAT+TGG | - | chr4_1:86285287-86285306 | Msa0581010:five_prime_UTR | 50.0% | |
| !! | CCAAAGGGTTGGGTTGGGTT+TGG | + | chr4_1:86281044-86281063 | None:intergenic | 55.0% |
| CCAAACCCAACCCAACCCTT+TGG | - | chr4_1:86281041-86281060 | Msa0581010:three_prime_UTR | 55.0% | |
| ! | CTGATGGGTCTCGACTCGAT+CGG | + | chr4_1:86281283-86281302 | None:intergenic | 55.0% |
| GATGTCAACGGCGAGATTCG+TGG | - | chr4_1:86281359-86281378 | Msa0581010:three_prime_UTR | 55.0% | |
| GCCATGCTACCACCGTATTG+AGG | + | chr4_1:86281465-86281484 | None:intergenic | 55.0% | |
| CAATACGGTGGTAGCATGGC+TGG | - | chr4_1:86281465-86281484 | Msa0581010:CDS | 55.0% | |
| !! | GGTAGGAAGAGCACCAGGTT+TGG | + | chr4_1:86281562-86281581 | None:intergenic | 55.0% |
| !! | AGGATGGTAGGAAGAGCACC+AGG | + | chr4_1:86281567-86281586 | None:intergenic | 55.0% |
| TCAGAAGGCTGGAGCTTCTG+CGG | - | chr4_1:86281901-86281920 | Msa0581010:CDS | 55.0% | |
| CCATGGGAGATATTGCGCTC+CGG | - | chr4_1:86282336-86282355 | Msa0581010:intron | 55.0% | |
| CTGAAGTCCTGCTCAGGATC+CGG | + | chr4_1:86282358-86282377 | None:intergenic | 55.0% | |
| ! | CCACCACACCCAAGGCTTTT+CGG | + | chr4_1:86282455-86282474 | None:intergenic | 55.0% |
| CGAAAAGCCTTGGGTGTGGT+GGG | - | chr4_1:86282453-86282472 | Msa0581010:intron | 55.0% | |
| ACATAGTCCCACCACACCCA+AGG | + | chr4_1:86282463-86282482 | None:intergenic | 55.0% | |
| GGCATTCACATACTCGCCCA+CGG | + | chr4_1:86283265-86283284 | None:intergenic | 55.0% | |
| GCGAGTATGTGAATGCCCCT+TGG | - | chr4_1:86283268-86283287 | Msa0581010:intron | 55.0% | |
| CACAACTACGAGTGCACGTG+GGG | + | chr4_1:86283495-86283514 | None:intergenic | 55.0% | |
| CACACAACTACGAGTGCACG+TGG | + | chr4_1:86283497-86283516 | None:intergenic | 55.0% | |
| TGTTTGCAGTCGGTGGACCT+GGG | - | chr4_1:86283533-86283552 | Msa0581010:intron | 55.0% | |
| GAGGATGTTGGCATGATGCC+CGG | - | chr4_1:86283575-86283594 | Msa0581010:intron | 55.0% | |
| TGTTGGCATGATGCCCGGAA+CGG | - | chr4_1:86283580-86283599 | Msa0581010:intron | 55.0% | |
| AGAAAGCTACAGAGCAGGGG+GGG | + | chr4_1:86283848-86283867 | None:intergenic | 55.0% | |
| CAGAAAGCTACAGAGCAGGG+GGG | + | chr4_1:86283849-86283868 | None:intergenic | 55.0% | |
| GGCTTGGGTATGATTGCTGG+AGG | - | chr4_1:86284644-86284663 | Msa0581010:intron | 55.0% | |
| ACTTCTGCTTGGCTGTCCAG+GGG | + | chr4_1:86284903-86284922 | None:intergenic | 55.0% | |
| GAACTTCTGCTTGGCTGTCC+AGG | + | chr4_1:86284905-86284924 | None:intergenic | 55.0% | |
| GCCATGAAATCCCACGAGAC+TGG | + | chr4_1:86284971-86284990 | None:intergenic | 55.0% | |
| CATGGCGTGTAGCATGGATG+TGG | - | chr4_1:86284985-86285004 | Msa0581010:CDS | 55.0% | |
| GTCAACGGCGAGATTCGTGG+TGG | - | chr4_1:86281362-86281381 | Msa0581010:three_prime_UTR | 60.0% | |
| CCGGAGCGCAATATCTCCCA+TGG | + | chr4_1:86282339-86282358 | None:intergenic | 60.0% | |
| CCTGTGCTGAAGTCCTGCTC+AGG | + | chr4_1:86282364-86282383 | None:intergenic | 60.0% | |
| CCTGAGCAGGACTTCAGCAC+AGG | - | chr4_1:86282361-86282380 | Msa0581010:intron | 60.0% | |
| CCGAAAAGCCTTGGGTGTGG+TGG | - | chr4_1:86282452-86282471 | Msa0581010:intron | 60.0% | |
| CTCGCCCACGGAATGTATCC+TGG | + | chr4_1:86283253-86283272 | None:intergenic | 60.0% | |
| GTGTTTGCAGTCGGTGGACC+TGG | - | chr4_1:86283532-86283551 | Msa0581010:intron | 60.0% | |
| TTGCGCTCCGGATCCTGAGC+AGG | - | chr4_1:86282348-86282367 | Msa0581010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 86281014 | 86285336 | 86281014 | ID=Msa0581010;Name=Msa0581010 |
| chr4_1 | mRNA | 86281014 | 86285336 | 86281014 | ID=Msa0581010-mRNA-1;Parent=Msa0581010;Name=Msa0581010-mRNA-1;_AED=0.08;_eAED=0.08;_QI=281|1|1|1|0.90|0.83|12|383|623 |
| chr4_1 | exon | 86281014 | 86281495 | 86281014 | ID=Msa0581010-mRNA-1:exon:31890;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86281653 | 86281762 | 86281653 | ID=Msa0581010-mRNA-1:exon:31889;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86281879 | 86282007 | 86281879 | ID=Msa0581010-mRNA-1:exon:31888;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86282541 | 86282607 | 86282541 | ID=Msa0581010-mRNA-1:exon:31887;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86282726 | 86282808 | 86282726 | ID=Msa0581010-mRNA-1:exon:31886;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86283015 | 86283096 | 86283015 | ID=Msa0581010-mRNA-1:exon:31885;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86283186 | 86283262 | 86283186 | ID=Msa0581010-mRNA-1:exon:31884;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86283347 | 86283500 | 86283347 | ID=Msa0581010-mRNA-1:exon:31883;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86283598 | 86283686 | 86283598 | ID=Msa0581010-mRNA-1:exon:31882;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86283788 | 86284480 | 86283788 | ID=Msa0581010-mRNA-1:exon:31881;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86284747 | 86285112 | 86284747 | ID=Msa0581010-mRNA-1:exon:31880;Parent=Msa0581010-mRNA-1 |
| chr4_1 | exon | 86285133 | 86285336 | 86285133 | ID=Msa0581010-mRNA-1:exon:31879;Parent=Msa0581010-mRNA-1 |
| chr4_1 | five_prime_UTR | 86285133 | 86285336 | 86285133 | ID=Msa0581010-mRNA-1:five_prime_utr;Parent=Msa0581010-mRNA-1 |
| chr4_1 | five_prime_UTR | 86285036 | 86285112 | 86285036 | ID=Msa0581010-mRNA-1:five_prime_utr;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86284747 | 86285035 | 86284747 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86283788 | 86284480 | 86283788 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86283598 | 86283686 | 86283598 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86283347 | 86283500 | 86283347 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86283186 | 86283262 | 86283186 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86283015 | 86283096 | 86283015 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86282726 | 86282808 | 86282726 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86282541 | 86282607 | 86282541 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86281879 | 86282007 | 86281879 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86281653 | 86281762 | 86281653 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | CDS | 86281397 | 86281495 | 86281397 | ID=Msa0581010-mRNA-1:cds;Parent=Msa0581010-mRNA-1 |
| chr4_1 | three_prime_UTR | 86281014 | 86281396 | 86281014 | ID=Msa0581010-mRNA-1:three_prime_utr;Parent=Msa0581010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
