AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1031660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031660 MtrunA17_Chr7g0253191 97.734 662 11 1 1 662 1 658 0.0 1333
Msa1031660 MtrunA17_Chr6g0461531 59.193 669 229 14 1 656 1 638 0.0 674
Msa1031660 MtrunA17_Chr8g0380431 46.312 583 246 17 4 556 1 546 1.77e-137 413
Msa1031660 MtrunA17_Chr4g0069011 36.929 547 256 19 71 597 25 502 7.68e-84 277
Msa1031660 MtrunA17_Chr4g0000071 51.799 278 115 4 328 599 299 563 3.54e-83 275
Msa1031660 MtrunA17_Chr2g0293641 35.552 571 279 19 47 597 35 536 8.48e-83 275
Msa1031660 MtrunA17_Chr2g0309651 48.123 293 107 6 349 618 297 567 1.94e-81 269
Msa1031660 MtrunA17_Chr2g0277111 46.850 254 102 5 358 595 214 450 6.30e-70 236
Msa1031660 MtrunA17_Chr2g0292081 29.710 138 91 2 435 568 259 394 1.48e-12 70.9
Msa1031660 MtrunA17_Chr8g0380421 60.000 50 19 1 555 604 2 50 1.86e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031660 AT3G13460.4 43.913 690 312 23 1 652 1 653 2.37e-147 443
Msa1031660 AT3G13460.1 43.913 690 313 23 1 652 1 654 3.92e-147 442
Msa1031660 AT3G13460.2 43.623 690 312 23 1 652 1 651 2.57e-145 438
Msa1031660 AT1G55500.4 44.283 621 273 19 1 593 1 576 1.46e-129 395
Msa1031660 AT1G55500.2 44.283 621 273 19 1 593 1 576 2.05e-129 395
Msa1031660 AT1G55500.5 44.071 624 270 18 1 593 1 576 2.82e-129 394
Msa1031660 AT1G55500.6 46.578 526 231 14 81 593 45 533 6.72e-123 377
Msa1031660 AT1G55500.3 43.317 621 266 20 1 593 1 563 1.39e-120 372
Msa1031660 AT1G55500.1 45.437 526 224 15 81 593 45 520 4.21e-114 353
Msa1031660 AT5G61020.2 56.711 298 114 6 366 654 193 484 3.51e-105 328
Msa1031660 AT5G61020.1 56.711 298 114 6 366 654 195 486 4.19e-105 328
Msa1031660 AT3G03950.2 45.547 393 143 11 221 600 76 410 4.34e-95 300
Msa1031660 AT3G03950.3 45.547 393 143 11 221 600 80 414 5.75e-95 300
Msa1031660 AT3G03950.1 45.547 393 143 11 221 600 77 411 6.16e-95 300
Msa1031660 AT3G13060.3 58.974 234 81 2 370 599 322 544 5.47e-87 285
Msa1031660 AT3G13060.6 58.974 234 81 2 370 599 322 544 5.47e-87 285
Msa1031660 AT3G13060.4 58.974 234 81 2 370 599 334 556 7.01e-87 285
Msa1031660 AT3G13060.2 58.974 234 81 2 370 599 344 566 7.61e-87 285
Msa1031660 AT3G17330.2 53.648 233 90 2 373 597 116 338 3.75e-83 271
Msa1031660 AT3G17330.1 53.648 233 90 2 373 597 218 440 3.97e-82 271
Msa1031660 AT3G17330.3 53.648 233 90 2 373 597 218 440 3.97e-82 271
Msa1031660 AT1G48110.2 57.692 208 80 1 398 597 284 491 9.74e-81 269
Msa1031660 AT1G48110.1 57.692 208 80 1 398 597 284 491 9.74e-81 269
Msa1031660 AT1G79270.2 62.963 189 62 1 417 597 288 476 1.34e-80 265
Msa1031660 AT1G79270.4 62.963 189 62 1 417 597 288 476 1.34e-80 265
Msa1031660 AT1G79270.3 62.963 189 62 1 417 597 288 476 1.34e-80 265
Msa1031660 AT1G79270.1 62.963 189 62 1 417 597 303 491 2.00e-80 265
Msa1031660 AT1G27960.3 46.350 274 118 3 370 639 215 463 2.56e-77 254
Msa1031660 AT1G27960.1 46.350 274 118 3 370 639 289 537 2.19e-76 254
Msa1031660 AT1G09810.2 52.301 239 90 5 367 595 133 357 2.40e-75 248
Msa1031660 AT1G09810.1 52.301 239 90 5 367 595 175 399 3.31e-75 249
Msa1031660 AT1G09810.3 52.301 239 90 5 367 595 156 380 4.06e-75 248
Msa1031660 AT5G58190.1 56.221 217 82 4 376 588 274 481 7.10e-74 247
Msa1031660 AT5G58190.2 56.221 217 82 4 376 588 275 482 7.82e-74 247
Msa1031660 AT3G13460.3 38.685 517 264 20 1 485 1 496 2.37e-70 237
Msa1031660 AT3G13060.1 59.162 191 63 2 370 556 344 523 4.35e-66 227
Msa1031660 AT3G13060.5 50.000 120 45 2 370 485 344 452 6.41e-24 105
Msa1031660 AT1G27960.2 43.307 127 44 2 370 492 289 391 2.46e-22 100
Msa1031660 AT4G11970.5 30.675 163 100 4 435 587 72 231 1.12e-16 82.8
Msa1031660 AT4G11970.2 30.675 163 100 4 435 587 72 231 1.71e-16 82.0
Msa1031660 AT4G11970.3 30.675 163 100 4 435 587 72 231 2.33e-16 82.0
Msa1031660 AT4G11970.1 30.675 163 100 4 435 587 72 231 1.20e-15 80.5
Msa1031660 AT4G11970.4 30.675 163 100 4 435 587 72 231 1.20e-15 80.5

Find 200 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAGTATATTGGATGATTT+TGG 0.060809 7_1:-66374502 Msa1031660:CDS
ATCTATTTACAGGGTGTTTA+TGG 0.107201 7_1:-66376268 Msa1031660:intron
ATTATATATTATTAAATTAA+AGG 0.163460 7_1:+66373618 None:intergenic
TCCATCGAGGTTCACATAAT+TGG 0.214038 7_1:+66376708 None:intergenic
TACCCTTCTACATATTATTA+TGG 0.241612 7_1:-66376926 Msa1031660:CDS
GGTGATTGTACAAATCAAAA+TGG 0.241748 7_1:-66375962 Msa1031660:CDS
TGCTCCATTGTCAGGATATC+AGG 0.245871 7_1:-66375858 Msa1031660:CDS
CCTTCAAATGTTATGAATAA+AGG 0.247263 7_1:-66376007 Msa1031660:CDS
ACTATTGGAGAGGAGGAATT+TGG 0.249775 7_1:+66376181 None:intergenic
AAGACAACTGTTACCTGTTT+TGG 0.251299 7_1:+66374421 None:intergenic
GTATCCCTGCTATTAGTTAC+AGG 0.256157 7_1:+66374674 None:intergenic
AACAATTTGTTCAGCCAATA+TGG 0.257330 7_1:-66375445 Msa1031660:CDS
GAAACCATCCCCATTTCTTC+TGG 0.280993 7_1:+66375312 None:intergenic
CACTCAGGAGAGAAAATTTA+AGG 0.287948 7_1:-66374455 Msa1031660:CDS
AAACCCAAACTTCACGTTCT+TGG 0.296932 7_1:-66378512 Msa1031660:five_prime_UTR
TTTGGAACATAGCTTGGATT+TGG 0.300599 7_1:+66376953 None:intergenic
TCCAACCTTTCCTCCATGTT+TGG 0.303296 7_1:+66375763 None:intergenic
AAAGCATAAAATATAGTGTT+TGG 0.303592 7_1:-66375057 Msa1031660:CDS
TGGTTTCAGTGAGCTAAATA+AGG 0.312720 7_1:-66375296 Msa1031660:CDS
TTCAGAGCTAATTCTCGTTA+TGG 0.316388 7_1:-66375415 Msa1031660:CDS
TGGAGAGTTGTAATAAGAAC+AGG 0.317037 7_1:+66376114 None:intergenic
TGCAAGCAAAACAAGTATAT+TGG 0.320217 7_1:-66374512 Msa1031660:CDS
CCTCCATAATAATATGTAGA+AGG 0.333768 7_1:+66376923 None:intergenic
TTGATCCATTCCTTTCTAAC+AGG 0.337233 7_1:+66373875 None:intergenic
GCCGCCAAGAACGTGAAGTT+TGG 0.341615 7_1:+66378508 None:intergenic
TGACCATCATGTTGAACTAT+TGG 0.349153 7_1:+66376166 None:intergenic
ATGAACATCGTCCTCGCTAT+AGG 0.350006 7_1:+66375081 None:intergenic
TACAGACGTGTCATTGGTTT+CGG 0.351571 7_1:-66375795 Msa1031660:CDS
AAAGCTGGATGCTGCATATC+AGG 0.352355 7_1:-66375011 Msa1031660:CDS
TCAGAGCTAATTCTCGTTAT+GGG 0.354713 7_1:-66375414 Msa1031660:CDS
CCTTTATTCATAACATTTGA+AGG 0.361258 7_1:+66376007 None:intergenic
CCAGCTTGTGCTCCATTGTC+AGG 0.364494 7_1:-66375866 Msa1031660:CDS
CTCTGAATGTGCTTCCATAT+TGG 0.368310 7_1:+66375431 None:intergenic
TGTGAAGTGGCATATCATTA+AGG 0.375415 7_1:-66374750 Msa1031660:CDS
TACTTCCTGGTTTCATGAAC+GGG 0.375965 7_1:-66375480 Msa1031660:CDS
TCTGGAATGGAACTACTTCC+TGG 0.385736 7_1:-66375493 Msa1031660:CDS
TAGCTTGGATTTGGATTGAA+TGG 0.393872 7_1:+66376962 None:intergenic
ATGTGCCTTAACACACCATT+TGG 0.396675 7_1:+66374722 None:intergenic
TCTATTTACAGGGTGTTTAT+GGG 0.397213 7_1:-66376267 Msa1031660:intron
CCGCCAAGAACGTGAAGTTT+GGG 0.397458 7_1:+66378509 None:intergenic
CAACATGATGGTCAGATGTA+TGG 0.399324 7_1:-66376157 Msa1031660:CDS
AATACAAGGGATTCTTATCA+AGG 0.399657 7_1:-66375899 Msa1031660:CDS
GTTAAAATTACCTTCTTCAC+TGG 0.403633 7_1:+66377891 None:intergenic
GCTAACGATTCCAGAAGAAA+TGG 0.405139 7_1:-66375322 Msa1031660:CDS
TTATTTGCTGATATTTGTCT+TGG 0.411427 7_1:-66373800 Msa1031660:three_prime_UTR
GTTATGACGGGCAAGGAGAT+TGG 0.421700 7_1:-66376741 Msa1031660:CDS
TCAGCCACTTCCACAATTCA+TGG 0.427777 7_1:-66375681 Msa1031660:intron
GGAGCAGCAGTTACCAAAAC+AGG 0.428880 7_1:-66374434 Msa1031660:intron
CATTTCTCGTTGTGGACCAC+TGG 0.431230 7_1:+66376057 None:intergenic
AAGCATAAAATATAGTGTTT+GGG 0.433296 7_1:-66375056 Msa1031660:CDS
TATGTAGAAGGGTATCCATT+TGG 0.438441 7_1:+66376935 None:intergenic
TTTACTGCAGAATTTGTCTC+TGG 0.439723 7_1:-66377949 Msa1031660:CDS
TATCCATTTGGAACATAGCT+TGG 0.442680 7_1:+66376947 None:intergenic
CTAACGATTCCAGAAGAAAT+GGG 0.443518 7_1:-66375321 Msa1031660:CDS
AGTAATAAAGTGACCGGTCC+AGG 0.445354 7_1:+66375229 None:intergenic
CGTTATGGGTCTTCTGCATA+CGG 0.446971 7_1:-66375400 Msa1031660:CDS
AATCCCTACAGACGTGTCAT+TGG 0.451053 7_1:-66375801 Msa1031660:CDS
TGTCCCCTTAGCTGCACCAT+TGG 0.451239 7_1:+66376991 None:intergenic
TACAAATCAAAATGGGTTGA+AGG 0.456277 7_1:-66375954 Msa1031660:CDS
AAGGCCAGTGATATAACATT+TGG 0.456570 7_1:-66373988 Msa1031660:CDS
AGCTACTGCAGATGCAGCAC+AGG 0.457344 7_1:-66373917 Msa1031660:CDS
TTGATAAAACTGTAGAGTAT+TGG 0.458780 7_1:-66374802 Msa1031660:CDS
GGCTATGGCTACACACCATA+TGG 0.460624 7_1:-66376217 Msa1031660:CDS
TTCCATTCCAGATGGATGTC+TGG 0.464762 7_1:+66375504 None:intergenic
TAGAAGAATCTTCAAATGCT+GGG 0.467118 7_1:+66373851 None:intergenic
ATCTTTGATATTTGCCACTT+GGG 0.469425 7_1:+66375733 None:intergenic
AACACTAGCGGTCAATTTGT+TGG 0.470135 7_1:-66374854 Msa1031660:CDS
AATCCAAGCTATGTTCCAAA+TGG 0.471316 7_1:-66376950 Msa1031660:CDS
TTAGAAGAATCTTCAAATGC+TGG 0.480666 7_1:+66373850 None:intergenic
TCCAATTATGTGAACCTCGA+TGG 0.484174 7_1:-66376709 Msa1031660:CDS
GCATCTCCAACGATAGTCTT+GGG 0.484717 7_1:+66377918 None:intergenic
TTGCTTAATCAACCTTGGTA+TGG 0.485191 7_1:-66373675 Msa1031660:three_prime_UTR
AGCATCTCCAACGATAGTCT+TGG 0.485443 7_1:+66377917 None:intergenic
CCCAAACTTCACGTTCTTGG+CGG 0.486730 7_1:-66378509 Msa1031660:five_prime_UTR
AGTAGCTGATTCTTTCATCA+AGG 0.488428 7_1:+66373933 None:intergenic
CGGTCACTTTATTACTCAAA+GGG 0.489330 7_1:-66375222 Msa1031660:CDS
TCCAAACATGGAGGAAAGGT+TGG 0.490704 7_1:-66375764 Msa1031660:CDS
GATTAATTTCAGGTTATGAC+GGG 0.490922 7_1:-66376753 Msa1031660:intron
TAGAGTATTGGCAGCAGGAT+AGG 0.491648 7_1:-66374790 Msa1031660:CDS
AAGTACAGAGCCACAGGTAA+TGG 0.491834 7_1:-66375352 Msa1031660:CDS
TGGCTGAACAAATTGTTGCT+TGG 0.494643 7_1:+66375451 None:intergenic
ATCATTAAGGATATTCCAAA+TGG 0.497885 7_1:-66374737 Msa1031660:CDS
CAAGGTTGTAGCAAGAGACT+TGG 0.499680 7_1:+66373951 None:intergenic
TTTGCCAATGGTGCAGCTAA+GGG 0.501275 7_1:-66376995 Msa1031660:CDS
AATAAAAGCGTCAAAAGTCC+TGG 0.504069 7_1:-66375247 Msa1031660:CDS
AAAGATCCATCAGCAGAAGT+TGG 0.505293 7_1:+66376094 None:intergenic
AATCTTTGATATTTGCCACT+TGG 0.506182 7_1:+66375732 None:intergenic
AACTGTAGAGTATTGGCAGC+AGG 0.506456 7_1:-66374795 Msa1031660:CDS
AGCACACATCTTTGAATACA+AGG 0.507886 7_1:-66375913 Msa1031660:CDS
AATGGTGCAGCTAAGGGGAC+AGG 0.508068 7_1:-66376989 Msa1031660:CDS
AACTAATAGCAGGGATACTC+AGG 0.510719 7_1:-66374669 Msa1031660:CDS
TCTGCATACGGATCTAGAAC+AGG 0.511633 7_1:-66375388 Msa1031660:CDS
AGTGAAAGAAGAATATAGAG+AGG 0.513125 7_1:+66378548 None:intergenic
ATATTCCAAATGGTGTGTTA+AGG 0.513546 7_1:-66374727 Msa1031660:CDS
ATTCAGAGGTCCTGTTAGAA+AGG 0.515130 7_1:-66373885 Msa1031660:CDS
ACTTCGTCATCACTCTTCAC+TGG 0.515319 7_1:+66375190 None:intergenic
GGTGAAGCATACGCTCCATA+TGG 0.515386 7_1:+66376202 None:intergenic
TAAAACAGACTATCAGATTG+AGG 0.515587 7_1:+66373580 None:intergenic
ACAAACCTGTAACTAATAGC+AGG 0.516861 7_1:-66374679 Msa1031660:CDS
TCTTCTCAGTGCTTTAGTCA+TGG 0.520668 7_1:-66373729 Msa1031660:three_prime_UTR
TGATTAATTTCAGGTTATGA+CGG 0.522210 7_1:-66376754 Msa1031660:intron
AACTCTCCAACTTCTGCTGA+TGG 0.525703 7_1:-66376100 Msa1031660:CDS
TTGTATTCAAAGATGTGTGC+TGG 0.527545 7_1:+66375915 None:intergenic
CTACTTCCTGGTTTCATGAA+CGG 0.528282 7_1:-66375481 Msa1031660:CDS
AATGGTTCCAGACATCCATC+TGG 0.528313 7_1:-66375511 Msa1031660:CDS
CTGCAGGTTAAGTTTGAGAA+GGG 0.531094 7_1:-66374565 Msa1031660:intron
CCGGTCACTTTATTACTCAA+AGG 0.531712 7_1:-66375223 Msa1031660:CDS
TATATGTATCACCAAGGCTA+TGG 0.535794 7_1:-66376232 Msa1031660:CDS
ATTAACAAGTATCTGATGCA+AGG 0.536294 7_1:-66373513 Msa1031660:three_prime_UTR
GGTTTCAGTGAGCTAAATAA+GGG 0.537128 7_1:-66375295 Msa1031660:CDS
TGATGACGAAGTAGTCCCTC+TGG 0.538227 7_1:-66375179 Msa1031660:CDS
CGAGCCAAATGTTATATCAC+TGG 0.539211 7_1:+66373984 None:intergenic
GCAAGGATACGTTCAGAGGA+AGG 0.543049 7_1:+66378445 None:intergenic
AGATGCTGAGCCAGTGAAGA+AGG 0.544090 7_1:-66377901 Msa1031660:intron
GTGATTGTACAAATCAAAAT+GGG 0.544884 7_1:-66375961 Msa1031660:CDS
AAAACAGACTATCAGATTGA+GGG 0.545055 7_1:+66373581 None:intergenic
TGGCAGCAGGATAGGTGGAC+TGG 0.546329 7_1:-66374782 Msa1031660:CDS
AACTCTGTTAGCATGGTCAA+TGG 0.546862 7_1:-66375983 Msa1031660:CDS
CTCCATAATAATATGTAGAA+GGG 0.550357 7_1:+66376924 None:intergenic
GTTGGTTTAGCTGAGATGAC+TGG 0.550580 7_1:-66374836 Msa1031660:CDS
CTATTTACAGGGTGTTTATG+GGG 0.552329 7_1:-66376266 Msa1031660:intron
TAATTTAATAATATATAATG+TGG 0.552660 7_1:-66373614 Msa1031660:three_prime_UTR
CCTGACAATGGAGCACAAGC+TGG 0.556300 7_1:+66375866 None:intergenic
CGTCATCACTCTTCACTGGA+AGG 0.556648 7_1:+66375194 None:intergenic
GGTCCAAGGTTGAGTACTCA+TGG 0.557426 7_1:-66375836 Msa1031660:CDS
TGCAGATGCAGCACAGGGGA+AGG 0.560094 7_1:-66373911 Msa1031660:CDS
GAGGTCCTGTTAGAAAGGAA+TGG 0.560680 7_1:-66373880 Msa1031660:CDS
CAGTGATATAACATTTGGCT+CGG 0.560767 7_1:-66373983 Msa1031660:CDS
GATAACAAGTACAGAGCCAC+AGG 0.561687 7_1:-66375358 Msa1031660:CDS
GATGCTGCATATCAGGAAGC+TGG 0.562451 7_1:-66375004 Msa1031660:CDS
AGGAGCAACAGAAGGCATGA+TGG 0.563308 7_1:+66378465 None:intergenic
TCAAAGATTTCTCATCTCAA+AGG 0.563706 7_1:-66375718 Msa1031660:CDS
TCAGAACTCTTGGCAGCTCT+AGG 0.565264 7_1:+66375271 None:intergenic
TAAAGGAAACTCTGTTAGCA+TGG 0.566310 7_1:-66375990 Msa1031660:CDS
TCTGCAGGTTAAGTTTGAGA+AGG 0.567461 7_1:-66374566 Msa1031660:intron
AAGCGTCAAAAGTCCTGGAC+CGG 0.570008 7_1:-66375242 Msa1031660:CDS
GAATAACATACCATGAATTG+TGG 0.570612 7_1:+66375671 None:intergenic
TTTAGCTGAGATGACTGGTC+CGG 0.571001 7_1:-66374831 Msa1031660:CDS
TTCCAGACATCCATCTGGAA+TGG 0.573479 7_1:-66375506 Msa1031660:CDS
ATTTCAGGTTATGACGGGCA+AGG 0.573517 7_1:-66376748 Msa1031660:intron
TCTCCAATAGTTCAACATGA+TGG 0.574558 7_1:-66376169 Msa1031660:CDS
AAACCAATGACACGTCTGTA+GGG 0.574611 7_1:+66375798 None:intergenic
GTGAAAGAAGAATATAGAGA+GGG 0.576792 7_1:+66378549 None:intergenic
AACATGATGGTCAGATGTAT+GGG 0.580184 7_1:-66376156 Msa1031660:CDS
GCTCCATTGTCAGGATATCA+GGG 0.580366 7_1:-66375857 Msa1031660:CDS
TACATCCCGTTCATGAAACC+AGG 0.582289 7_1:+66375475 None:intergenic
CCTTTGAGTAATAAAGTGAC+CGG 0.584388 7_1:+66375223 None:intergenic
TTAACAAGTATCTGATGCAA+GGG 0.584691 7_1:-66373512 Msa1031660:three_prime_UTR
TCGCAGCCCAAGACTATCGT+TGG 0.584897 7_1:-66377924 Msa1031660:CDS
CCTTCTACATATTATTATGG+AGG 0.590646 7_1:-66376923 Msa1031660:intron
TGTCAGGATATCAGGGTCCA+AGG 0.592619 7_1:-66375850 Msa1031660:CDS
TAATCAACCTTGGTATGGAG+TGG 0.595330 7_1:-66373670 Msa1031660:three_prime_UTR
AAGGTTGTAGCAAGAGACTT+GGG 0.598797 7_1:+66373952 None:intergenic
GGAAGCAAGGATACGTTCAG+AGG 0.598858 7_1:+66378441 None:intergenic
TCAGAGGAAGGAGCAACAGA+AGG 0.599454 7_1:+66378457 None:intergenic
GTTCTTTATTCAGAACCAGA+GGG 0.599531 7_1:+66375164 None:intergenic
ATGTTGAACTATTGGAGAGG+AGG 0.600088 7_1:+66376174 None:intergenic
TTGCCAATGGTGCAGCTAAG+GGG 0.600190 7_1:-66376994 Msa1031660:CDS
GCACCATGAGTACTCAACCT+TGG 0.600384 7_1:+66375833 None:intergenic
CATACCATGAATTGTGGAAG+TGG 0.601208 7_1:+66375677 None:intergenic
AGTATTGGCAGCAGGATAGG+TGG 0.603280 7_1:-66374787 Msa1031660:CDS
TCCGTACAGGTCAACACTAG+CGG 0.604969 7_1:-66374866 Msa1031660:intron
AGAAGAATCTTCAAATGCTG+GGG 0.605229 7_1:+66373852 None:intergenic
GGAAGTAGTTCCATTCCAGA+TGG 0.605311 7_1:+66375496 None:intergenic
GCTACTGCAGATGCAGCACA+GGG 0.606043 7_1:-66373916 Msa1031660:CDS
TCGGATAGACAGTCCAAACA+TGG 0.608453 7_1:-66375776 Msa1031660:CDS
TTGCTCAAAACAGGTCAACA+AGG 0.609020 7_1:-66374007 Msa1031660:intron
ACAGTCCAAACATGGAGGAA+AGG 0.610522 7_1:-66375768 Msa1031660:CDS
CTGGTTGCTTTAATGTGAAG+TGG 0.611035 7_1:-66374763 Msa1031660:CDS
TGTTCTTTATTCAGAACCAG+AGG 0.611819 7_1:+66375163 None:intergenic
AATTATGTGAACCTCGATGG+AGG 0.612276 7_1:-66376706 Msa1031660:CDS
ATACAAGGGATTCTTATCAA+GGG 0.612638 7_1:-66375898 Msa1031660:CDS
GAAACCAATGACACGTCTGT+AGG 0.613907 7_1:+66375797 None:intergenic
ATTATGTGAACCTCGATGGA+GGG 0.617318 7_1:-66376705 Msa1031660:CDS
CTGAATAAAGAACAATACAA+TGG 0.618423 7_1:-66375154 Msa1031660:CDS
GCAGTTGACATTTCTCGTTG+TGG 0.618461 7_1:+66376049 None:intergenic
GGACCCTGATATCCTGACAA+TGG 0.621943 7_1:+66375854 None:intergenic
GATTCCAGAAGAAATGGGGA+TGG 0.623548 7_1:-66375316 Msa1031660:CDS
CAAACCTGTAACTAATAGCA+GGG 0.630259 7_1:-66374678 Msa1031660:CDS
TGTATTCAAAGATGTGTGCT+GGG 0.631040 7_1:+66375916 None:intergenic
GGAGAGTTGTAATAAGAACA+GGG 0.633150 7_1:+66376115 None:intergenic
AATGTCAACTGCTGTTAATG+CGG 0.633445 7_1:-66376038 Msa1031660:CDS
CATCATCAAATCCTATAGCG+AGG 0.642490 7_1:-66375092 Msa1031660:CDS
GCACACATCTTTGAATACAA+GGG 0.645973 7_1:-66375912 Msa1031660:CDS
ATGGTGTGTAGCCATAGCCT+TGG 0.646200 7_1:+66376221 None:intergenic
GTTTGGGCAAGCACTCCCAA+CGG 0.651245 7_1:-66375040 Msa1031660:CDS
TGCTCTTATATGTATCACCA+AGG 0.657123 7_1:-66376238 Msa1031660:CDS
GACGGGCAAGGAGATTGGAG+TGG 0.657548 7_1:-66376736 Msa1031660:CDS
ACAGGGGAAGGTGAATTCAG+AGG 0.661008 7_1:-66373899 Msa1031660:CDS
GCTGCATATCAGGAAGCTGG+TGG 0.665240 7_1:-66375001 Msa1031660:CDS
ATCATGTTGAACTATTGGAG+AGG 0.681216 7_1:+66376171 None:intergenic
TAATAGCAGGGATACTCAGG+AGG 0.681467 7_1:-66374666 Msa1031660:intron
CTTGAGTCATCCCTCCATCG+AGG 0.681479 7_1:+66376695 None:intergenic
GGTTGGATTATCTTCCCAAG+TGG 0.681917 7_1:-66375747 Msa1031660:CDS
TTTGCTCCGAACAAAACCAG+TGG 0.690495 7_1:-66376073 Msa1031660:CDS
GTTAACTCCACTCCATACCA+AGG 0.691738 7_1:+66373663 None:intergenic
TAACGATTCCAGAAGAAATG+GGG 0.692399 7_1:-66375320 Msa1031660:CDS
AGCAACATAGCCATTACCTG+TGG 0.696688 7_1:+66375342 None:intergenic
GATAGACAGTCCAAACATGG+AGG 0.717397 7_1:-66375773 Msa1031660:CDS
CTACTGCAGATGCAGCACAG+GGG 0.780947 7_1:-66373915 Msa1031660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAAAAATAAAAAAAA+AGG - chr7_1:66374933-66374952 Msa1031660:intron 0.0%
!! ATTATATATTATTAAATTAA+AGG + chr7_1:66378400-66378419 None:intergenic 0.0%
!!! GTTTAAGTTTTTATTTTTTA+AGG - chr7_1:66375126-66375145 Msa1031660:CDS 10.0%
!!! TATTTTTCTCGATTTTTTTT+CGG - chr7_1:66373633-66373652 Msa1031660:three_prime_UTR 15.0%
!!! GGAAATTAAGTAAATTTTTT+AGG - chr7_1:66373655-66373674 Msa1031660:three_prime_UTR 15.0%
!! CAAAAAAATGAAGAAAAAAT+TGG + chr7_1:66373841-66373860 None:intergenic 15.0%
!!! AAAAAATACAATTTTTGCAT+TGG - chr7_1:66374315-66374334 Msa1031660:intron 15.0%
!!! AAAAATACAATTTTTGCATT+GGG - chr7_1:66374316-66374335 Msa1031660:intron 15.0%
!! ATAACAACAAAAAATCTTAA+GGG + chr7_1:66374725-66374744 None:intergenic 15.0%
!!! ATTTTTAAAAATCAGTTATC+CGG + chr7_1:66374925-66374944 None:intergenic 15.0%
!! AAGATTGTTGAATTAATATT+TGG - chr7_1:66375194-66375213 Msa1031660:CDS 15.0%
!! AGATTGTTGAATTAATATTT+GGG - chr7_1:66375195-66375214 Msa1031660:CDS 15.0%
!! ATGCATAAGTATAAAAAAAA+TGG + chr7_1:66375390-66375409 None:intergenic 15.0%
!!! AAAAGTTATATTTGAGTTTA+GGG + chr7_1:66376470-66376489 None:intergenic 15.0%
!!! AAAAAGTTATATTTGAGTTT+AGG + chr7_1:66376471-66376490 None:intergenic 15.0%
!!! TCCTATATTTTTGTTATTTT+CGG - chr7_1:66377040-66377059 Msa1031660:intron 15.0%
!!! ATTTTTCTCGATTTTTTTTC+GGG - chr7_1:66373634-66373653 Msa1031660:three_prime_UTR 20.0%
!! GAATTTAGCTAATAACTATT+AGG + chr7_1:66373811-66373830 None:intergenic 20.0%
!!! TGAAGAAAAAATTGGTTTTT+GGG + chr7_1:66373833-66373852 None:intergenic 20.0%
!!! ATGAAGAAAAAATTGGTTTT+TGG + chr7_1:66373834-66373853 None:intergenic 20.0%
!!! ATTGTATTTTTTTCACTCAT+GGG + chr7_1:66374307-66374326 None:intergenic 20.0%
!!! AATTGTATTTTTTTCACTCA+TGG + chr7_1:66374308-66374327 None:intergenic 20.0%
!! CTCATGTTAATACTAAAATA+TGG - chr7_1:66374454-66374473 Msa1031660:CDS 20.0%
!! CATAACAACAAAAAATCTTA+AGG + chr7_1:66374726-66374745 None:intergenic 20.0%
!!! AATCTTAGCATTTTTCTTTT+AGG + chr7_1:66375180-66375199 None:intergenic 20.0%
!! TTTGTTAGCTACAAAATTAA+AGG - chr7_1:66375454-66375473 Msa1031660:CDS 20.0%
!! GTTATATAATCCATTTAAGT+TGG - chr7_1:66375523-66375542 Msa1031660:intron 20.0%
!! AAAGCATAAAATATAGTGTT+TGG - chr7_1:66376958-66376977 Msa1031660:CDS 20.0%
!! AAGCATAAAATATAGTGTTT+GGG - chr7_1:66376959-66376978 Msa1031660:CDS 20.0%
!! ACCGAAAATAACAAAAATAT+AGG + chr7_1:66377044-66377063 None:intergenic 20.0%
!!! TATATTTTTGTTATTTTCGG+TGG - chr7_1:66377043-66377062 Msa1031660:intron 20.0%
!!! ATATTTTTGTTATTTTCGGT+GGG - chr7_1:66377044-66377063 Msa1031660:intron 20.0%
!!! TCAAATTGTCAAAATTTTCA+AGG - chr7_1:66377476-66377495 Msa1031660:intron 20.0%
!!! CTTGTTTTCTAAAATCAAAT+AGG - chr7_1:66377862-66377881 Msa1031660:intron 20.0%
!! TAAGAAAAAGAGAAAGCATA+TGG + chr7_1:66373615-66373634 None:intergenic 25.0%
! CATGTGTAATATCTTTCTTA+GGG - chr7_1:66373708-66373727 Msa1031660:three_prime_UTR 25.0%
! AAAACTTGATTACAAAGTGA+AGG + chr7_1:66373750-66373769 None:intergenic 25.0%
!! TTTTCACAAAAAGTCAAGTT+TGG + chr7_1:66374228-66374247 None:intergenic 25.0%
! CTAAAACATCTTATCTTGAA+AGG + chr7_1:66374371-66374390 None:intergenic 25.0%
!! CTTTCAAGATAAGATGTTTT+AGG - chr7_1:66374369-66374388 Msa1031660:intron 25.0%
! TTTGTTTACATGAGCTATAT+TGG + chr7_1:66374582-66374601 None:intergenic 25.0%
!! AATAAGCTTTTTATCCAAAG+AGG - chr7_1:66374699-66374718 Msa1031660:CDS 25.0%
!!! TTTTTGTTGTTATGTTCGTT+TGG - chr7_1:66374732-66374751 Msa1031660:CDS 25.0%
! TACCCTTCTACATATTATTA+TGG - chr7_1:66375089-66375108 Msa1031660:CDS 25.0%
! CTCCATAATAATATGTAGAA+GGG + chr7_1:66375094-66375113 None:intergenic 25.0%
! TACATATTATTATGGAGGTA+AGG - chr7_1:66375097-66375116 Msa1031660:CDS 25.0%
!!! GCATTTTTCTTTTAGGTAAT+CGG + chr7_1:66375173-66375192 None:intergenic 25.0%
! TTGTTGAATTAATATTTGGG+CGG - chr7_1:66375198-66375217 Msa1031660:CDS 25.0%
!!! TGATTAATTTCAGGTTATGA+CGG - chr7_1:66375261-66375280 Msa1031660:CDS 25.0%
!!! CAACTCATTTTTGTTCTTTT+TGG - chr7_1:66375611-66375630 Msa1031660:intron 25.0%
! CCTTTATTCATAACATTTGA+AGG + chr7_1:66376011-66376030 None:intergenic 25.0%
! CCTTCAAATGTTATGAATAA+AGG - chr7_1:66376008-66376027 Msa1031660:CDS 25.0%
! GTGATTGTACAAATCAAAAT+GGG - chr7_1:66376054-66376073 Msa1031660:CDS 25.0%
! CTGAATAAAGAACAATACAA+TGG - chr7_1:66376861-66376880 Msa1031660:intron 25.0%
!! GGTAAACTCATAGATTTTAT+TGG - chr7_1:66377088-66377107 Msa1031660:intron 25.0%
! TGTACGGAAAAAATTGAATT+AGG + chr7_1:66377137-66377156 None:intergenic 25.0%
!!! TAATTCAATTTTTTCCGTAC+AGG - chr7_1:66377136-66377155 Msa1031660:intron 25.0%
!!! ACAGTTTTATCAAAATCAAC+CGG + chr7_1:66377206-66377225 None:intergenic 25.0%
! TTGATAAAACTGTAGAGTAT+TGG - chr7_1:66377213-66377232 Msa1031660:intron 25.0%
! ATCATTAAGGATATTCCAAA+TGG - chr7_1:66377278-66377297 Msa1031660:intron 25.0%
!! ACAAGTATATTGGATGATTT+TGG - chr7_1:66377513-66377532 Msa1031660:intron 25.0%
!! CAAGTATATTGGATGATTTT+GGG - chr7_1:66377514-66377533 Msa1031660:intron 25.0%
!! TTTTAAGCAACTTGCAAAAA+GGG + chr7_1:66377918-66377937 None:intergenic 25.0%
!! ATTTTAAGCAACTTGCAAAA+AGG + chr7_1:66377919-66377938 None:intergenic 25.0%
! ATTATTGCTTCTTCAAACTA+AGG - chr7_1:66377937-66377956 Msa1031660:CDS 25.0%
! TTATTGCTTCTTCAAACTAA+GGG - chr7_1:66377938-66377957 Msa1031660:CDS 25.0%
!! TTATTTGCTGATATTTGTCT+TGG - chr7_1:66378215-66378234 Msa1031660:intron 25.0%
!! AATTTTTGCTTAATCAACCT+TGG - chr7_1:66378335-66378354 Msa1031660:intron 25.0%
GTGAAAGAAGAATATAGAGA+GGG + chr7_1:66373469-66373488 None:intergenic 30.0%
AGTGAAAGAAGAATATAGAG+AGG + chr7_1:66373470-66373489 None:intergenic 30.0%
GCATGTGTAATATCTTTCTT+AGG - chr7_1:66373707-66373726 Msa1031660:three_prime_UTR 30.0%
GTTAAAATTACCTTCTTCAC+TGG + chr7_1:66374127-66374146 None:intergenic 30.0%
ATACTAAAATATGGCCTGTT+TGG - chr7_1:66374463-66374482 Msa1031660:CDS 30.0%
TCAAATAAGTCAATCCAAAC+AGG + chr7_1:66374480-66374499 None:intergenic 30.0%
TCATCTATTTGTATGCAGAA+TGG - chr7_1:66374990-66375009 Msa1031660:CDS 30.0%
CCTCCATAATAATATGTAGA+AGG + chr7_1:66375095-66375114 None:intergenic 30.0%
CCTTCTACATATTATTATGG+AGG - chr7_1:66375092-66375111 Msa1031660:CDS 30.0%
! GCTTTTATTATTATCCGTTC+TGG - chr7_1:66375220-66375239 Msa1031660:CDS 30.0%
!! TTGGTGATGTGATTAATTTC+AGG - chr7_1:66375252-66375271 Msa1031660:CDS 30.0%
!! GATTAATTTCAGGTTATGAC+GGG - chr7_1:66375262-66375281 Msa1031660:CDS 30.0%
AACTCTCAACATATACAACA+CGG + chr7_1:66375506-66375525 None:intergenic 30.0%
TAAATTCAAAACAGCTACAC+TGG + chr7_1:66375553-66375572 None:intergenic 30.0%
AAACACCCTGTAAATAGATT+CGG + chr7_1:66375746-66375765 None:intergenic 30.0%
! ATCTATTTACAGGGTGTTTA+TGG - chr7_1:66375747-66375766 Msa1031660:CDS 30.0%
! TCTATTTACAGGGTGTTTAT+GGG - chr7_1:66375748-66375767 Msa1031660:CDS 30.0%
GGTGATTGTACAAATCAAAA+TGG - chr7_1:66376053-66376072 Msa1031660:CDS 30.0%
!! TACAAATCAAAATGGGTTGA+AGG - chr7_1:66376061-66376080 Msa1031660:CDS 30.0%
AATACAAGGGATTCTTATCA+AGG - chr7_1:66376116-66376135 Msa1031660:CDS 30.0%
ATACAAGGGATTCTTATCAA+GGG - chr7_1:66376117-66376136 Msa1031660:CDS 30.0%
! ATCTTTGATATTTGCCACTT+GGG + chr7_1:66376285-66376304 None:intergenic 30.0%
AATCTTTGATATTTGCCACT+TGG + chr7_1:66376286-66376305 None:intergenic 30.0%
TCAAAGATTTCTCATCTCAA+AGG - chr7_1:66376297-66376316 Msa1031660:intron 30.0%
GAATAACATACCATGAATTG+TGG + chr7_1:66376347-66376366 None:intergenic 30.0%
! TTTTTGTTGCAGAACATGAA+TGG - chr7_1:66376486-66376505 Msa1031660:intron 30.0%
! AACAATTTGTTCAGCCAATA+TGG - chr7_1:66376570-66376589 Msa1031660:intron 30.0%
! GCTTTTATTATCAGAACTCT+TGG + chr7_1:66376757-66376776 None:intergenic 30.0%
! GATGATGAAAAATTTTGCGT+CGG + chr7_1:66376910-66376929 None:intergenic 30.0%
TACCAAATGAAAACTGTACA+TGG + chr7_1:66377072-66377091 None:intergenic 30.0%
ATATTCCAAATGGTGTGTTA+AGG - chr7_1:66377288-66377307 Msa1031660:intron 30.0%
ACATAAGCATCTAGTTGAAA+GGG + chr7_1:66377420-66377439 None:intergenic 30.0%
TACATAAGCATCTAGTTGAA+AGG + chr7_1:66377421-66377440 None:intergenic 30.0%
TTATGTATATGTCATTCTGC+AGG - chr7_1:66377434-66377453 Msa1031660:intron 30.0%
TGCAAGCAAAACAAGTATAT+TGG - chr7_1:66377503-66377522 Msa1031660:intron 30.0%
ATCTTTGACAAAAGAAACAG+TGG + chr7_1:66377758-66377777 None:intergenic 30.0%
! CTTTTGTCAAAGATATTTGC+TGG - chr7_1:66377764-66377783 Msa1031660:intron 30.0%
GTACAAATCAAGGTAAAACA+AGG - chr7_1:66377800-66377819 Msa1031660:intron 30.0%
TAAATTTCCTTGCTCAAAAC+AGG - chr7_1:66377999-66378018 Msa1031660:intron 30.0%
TAGAAGAATCTTCAAATGCT+GGG + chr7_1:66378167-66378186 None:intergenic 30.0%
TTAGAAGAATCTTCAAATGC+TGG + chr7_1:66378168-66378187 None:intergenic 30.0%
AAAACAGACTATCAGATTGA+GGG + chr7_1:66378437-66378456 None:intergenic 30.0%
TAAAACAGACTATCAGATTG+AGG + chr7_1:66378438-66378457 None:intergenic 30.0%
ATTAACAAGTATCTGATGCA+AGG - chr7_1:66378502-66378521 Msa1031660:five_prime_UTR 30.0%
TTAACAAGTATCTGATGCAA+GGG - chr7_1:66378503-66378522 Msa1031660:five_prime_UTR 30.0%
ATATGGAGAAAGTTGAAGAG+GGG + chr7_1:66373598-66373617 None:intergenic 35.0%
CATATGGAGAAAGTTGAAGA+GGG + chr7_1:66373599-66373618 None:intergenic 35.0%
TTTACTGCAGAATTTGTCTC+TGG - chr7_1:66374066-66374085 Msa1031660:intron 35.0%
AAACATGAGCAGCATCAATA+AGG + chr7_1:66374149-66374168 None:intergenic 35.0%
!!! TGCTGCTCATGTTTTTAAGT+TGG - chr7_1:66374155-66374174 Msa1031660:intron 35.0%
TGATTACACAACAGTAATCG+TGG + chr7_1:66374406-66374425 None:intergenic 35.0%
!! ATAAGTTTTGTGAGCCTGTT+TGG - chr7_1:66374514-66374533 Msa1031660:CDS 35.0%
!! TAAGTTTTGTGAGCCTGTTT+GGG - chr7_1:66374515-66374534 Msa1031660:CDS 35.0%
TTACATAACTTCTCCCAAAC+AGG + chr7_1:66374531-66374550 None:intergenic 35.0%
AAAAATCTTAAGGGCCTCTT+TGG + chr7_1:66374716-66374735 None:intergenic 35.0%
! TTGTTGTTATGTTCGTTTGG+TGG - chr7_1:66374735-66374754 Msa1031660:CDS 35.0%
TAGCTTGGATTTGGATTGAA+TGG + chr7_1:66375056-66375075 None:intergenic 35.0%
! TTTGGAACATAGCTTGGATT+TGG + chr7_1:66375065-66375084 None:intergenic 35.0%
AATCCAAGCTATGTTCCAAA+TGG - chr7_1:66375065-66375084 Msa1031660:CDS 35.0%
! TATCCATTTGGAACATAGCT+TGG + chr7_1:66375071-66375090 None:intergenic 35.0%
!! TATGTAGAAGGGTATCCATT+TGG + chr7_1:66375083-66375102 None:intergenic 35.0%
!!! ACCAAGTCATTTTTCCAGAA+CGG + chr7_1:66375237-66375256 None:intergenic 35.0%
CAAGTAAGTACCTTAATCTC+TGG - chr7_1:66375339-66375358 Msa1031660:CDS 35.0%
GCATACATTCATCACAACTA+CGG + chr7_1:66375368-66375387 None:intergenic 35.0%
AGAAAGTAGTCACCATCAAA+TGG + chr7_1:66375430-66375449 None:intergenic 35.0%
!! TTTGGTGTTTCTGTTCTACT+AGG - chr7_1:66375629-66375648 Msa1031660:intron 35.0%
AGCATTTATCAAGTGGTTAG+AGG + chr7_1:66375716-66375735 None:intergenic 35.0%
!! CAGGAAAAGCATTTATCAAG+TGG + chr7_1:66375723-66375742 None:intergenic 35.0%
! CTATTTACAGGGTGTTTATG+GGG - chr7_1:66375749-66375768 Msa1031660:CDS 35.0%
TGCTCTTATATGTATCACCA+AGG - chr7_1:66375777-66375796 Msa1031660:CDS 35.0%
TATATGTATCACCAAGGCTA+TGG - chr7_1:66375783-66375802 Msa1031660:CDS 35.0%
ATCATGTTGAACTATTGGAG+AGG + chr7_1:66375847-66375866 None:intergenic 35.0%
TCTCCAATAGTTCAACATGA+TGG - chr7_1:66375846-66375865 Msa1031660:CDS 35.0%
TGACCATCATGTTGAACTAT+TGG + chr7_1:66375852-66375871 None:intergenic 35.0%
AACATGATGGTCAGATGTAT+GGG - chr7_1:66375859-66375878 Msa1031660:CDS 35.0%
GGAGAGTTGTAATAAGAACA+GGG + chr7_1:66375903-66375922 None:intergenic 35.0%
TGGAGAGTTGTAATAAGAAC+AGG + chr7_1:66375904-66375923 None:intergenic 35.0%
AATGTCAACTGCTGTTAATG+CGG - chr7_1:66375977-66375996 Msa1031660:CDS 35.0%
TAAAGGAAACTCTGTTAGCA+TGG - chr7_1:66376025-66376044 Msa1031660:CDS 35.0%
TGTATTCAAAGATGTGTGCT+GGG + chr7_1:66376102-66376121 None:intergenic 35.0%
TTGTATTCAAAGATGTGTGC+TGG + chr7_1:66376103-66376122 None:intergenic 35.0%
AGCACACATCTTTGAATACA+AGG - chr7_1:66376102-66376121 Msa1031660:CDS 35.0%
GCACACATCTTTGAATACAA+GGG - chr7_1:66376103-66376122 Msa1031660:CDS 35.0%
TTCAGAGCTAATTCTCGTTA+TGG - chr7_1:66376600-66376619 Msa1031660:intron 35.0%
TCAGAGCTAATTCTCGTTAT+GGG - chr7_1:66376601-66376620 Msa1031660:intron 35.0%
CTAACGATTCCAGAAGAAAT+GGG - chr7_1:66376694-66376713 Msa1031660:intron 35.0%
TAACGATTCCAGAAGAAATG+GGG - chr7_1:66376695-66376714 Msa1031660:intron 35.0%
TGGTTTCAGTGAGCTAAATA+AGG - chr7_1:66376719-66376738 Msa1031660:CDS 35.0%
GGTTTCAGTGAGCTAAATAA+GGG - chr7_1:66376720-66376739 Msa1031660:CDS 35.0%
!! AATAAAAGCGTCAAAAGTCC+TGG - chr7_1:66376768-66376787 Msa1031660:intron 35.0%
CCTTTGAGTAATAAAGTGAC+CGG + chr7_1:66376795-66376814 None:intergenic 35.0%
! CGGTCACTTTATTACTCAAA+GGG - chr7_1:66376793-66376812 Msa1031660:intron 35.0%
GTTCTTTATTCAGAACCAGA+GGG + chr7_1:66376854-66376873 None:intergenic 35.0%
TGTTCTTTATTCAGAACCAG+AGG + chr7_1:66376855-66376874 None:intergenic 35.0%
! TGCCATGTACAGTTTTCATT+TGG - chr7_1:66377067-66377086 Msa1031660:intron 35.0%
TGTGAAGTGGCATATCATTA+AGG - chr7_1:66377265-66377284 Msa1031660:intron 35.0%
ACAAACCTGTAACTAATAGC+AGG - chr7_1:66377336-66377355 Msa1031660:intron 35.0%
CAAACCTGTAACTAATAGCA+GGG - chr7_1:66377337-66377356 Msa1031660:intron 35.0%
! CTTAAATTTTCTCTCCTGAG+TGG + chr7_1:66377562-66377581 None:intergenic 35.0%
CACTCAGGAGAGAAAATTTA+AGG - chr7_1:66377560-66377579 Msa1031660:intron 35.0%
! AAGACAACTGTTACCTGTTT+TGG + chr7_1:66377597-66377616 None:intergenic 35.0%
TTGAAATGTAAGAGCTTGTG+TGG - chr7_1:66377665-66377684 Msa1031660:intron 35.0%
CTGTTGTTGTGTACAAATCA+AGG - chr7_1:66377790-66377809 Msa1031660:intron 35.0%
AAGGCCAGTGATATAACATT+TGG - chr7_1:66378027-66378046 Msa1031660:intron 35.0%
CAGTGATATAACATTTGGCT+CGG - chr7_1:66378032-66378051 Msa1031660:intron 35.0%
! AGTAGCTGATTCTTTCATCA+AGG + chr7_1:66378085-66378104 None:intergenic 35.0%
TTGATCCATTCCTTTCTAAC+AGG + chr7_1:66378143-66378162 None:intergenic 35.0%
AGAAGAATCTTCAAATGCTG+GGG + chr7_1:66378166-66378185 None:intergenic 35.0%
!!! GTGCTTTGTTCTTTGTTTTC+TGG - chr7_1:66378251-66378270 Msa1031660:intron 35.0%
TTGCTTAATCAACCTTGGTA+TGG - chr7_1:66378340-66378359 Msa1031660:intron 35.0%
AAACCCAAACTTCACGTTCT+TGG - chr7_1:66373503-66373522 Msa1031660:three_prime_UTR 40.0%
GCATATGGAGAAAGTTGAAG+AGG + chr7_1:66373600-66373619 None:intergenic 40.0%
GCTTACACAGCACAACAATT+AGG + chr7_1:66373894-66373913 None:intergenic 40.0%
TTGTTGTGCTGTGTAAGCAT+AGG - chr7_1:66373896-66373915 Msa1031660:CDS 40.0%
CTTCTATAGTAGCTAGGTCA+AGG + chr7_1:66374039-66374058 None:intergenic 40.0%
TTGCAGCTTCTATAGTAGCT+AGG + chr7_1:66374045-66374064 None:intergenic 40.0%
!!! GCTCATGTTTTTAAGTTGGC+TGG - chr7_1:66374159-66374178 Msa1031660:intron 40.0%
!!! TGTTTTTAAGTTGGCTGGCA+TGG - chr7_1:66374164-66374183 Msa1031660:intron 40.0%
! CATGGTCTTGAAACGTGTTT+AGG - chr7_1:66374182-66374201 Msa1031660:intron 40.0%
! GTTTAGGCATGCCTCTTTTA+AGG - chr7_1:66374198-66374217 Msa1031660:intron 40.0%
! AGTTTGGTGAGCCTTAAAAG+AGG + chr7_1:66374212-66374231 None:intergenic 40.0%
!!! TCTACATGGCTTTGGCTTTT+AGG + chr7_1:66374284-66374303 None:intergenic 40.0%
! TTTTCACTCATGGGTCTACA+TGG + chr7_1:66374298-66374317 None:intergenic 40.0%
CAGGCTCACAAAACTTATGT+CGG + chr7_1:66374512-66374531 None:intergenic 40.0%
!!! AATGGACCTGTTTTTGCCAA+TGG - chr7_1:66375008-66375027 Msa1031660:CDS 40.0%
!! TCCGTTCTGGAAAAATGACT+TGG - chr7_1:66375233-66375252 Msa1031660:CDS 40.0%
TCCAATTATGTGAACCTCGA+TGG - chr7_1:66375306-66375325 Msa1031660:CDS 40.0%
TCCATCGAGGTTCACATAAT+TGG + chr7_1:66375310-66375329 None:intergenic 40.0%
AATTATGTGAACCTCGATGG+AGG - chr7_1:66375309-66375328 Msa1031660:CDS 40.0%
ATTATGTGAACCTCGATGGA+GGG - chr7_1:66375310-66375329 Msa1031660:CDS 40.0%
ACTACGGAAACCAGAGATTA+AGG + chr7_1:66375352-66375371 None:intergenic 40.0%
GTCACCATCAAATGGTTCTT+CGG + chr7_1:66375422-66375441 None:intergenic 40.0%
! CACTGGTCTACCAACTTAAA+TGG + chr7_1:66375536-66375555 None:intergenic 40.0%
TTCCTGCCGAATCTATTTAC+AGG - chr7_1:66375737-66375756 Msa1031660:CDS 40.0%
TCCTGCCGAATCTATTTACA+GGG - chr7_1:66375738-66375757 Msa1031660:CDS 40.0%
ACTATTGGAGAGGAGGAATT+TGG + chr7_1:66375837-66375856 None:intergenic 40.0%
ATGTTGAACTATTGGAGAGG+AGG + chr7_1:66375844-66375863 None:intergenic 40.0%
CAACATGATGGTCAGATGTA+TGG - chr7_1:66375858-66375877 Msa1031660:CDS 40.0%
AAAGATCCATCAGCAGAAGT+TGG + chr7_1:66375924-66375943 None:intergenic 40.0%
AACTCTGTTAGCATGGTCAA+TGG - chr7_1:66376032-66376051 Msa1031660:CDS 40.0%
AAACCAATGACACGTCTGTA+GGG + chr7_1:66376220-66376239 None:intergenic 40.0%
!! TACAGACGTGTCATTGGTTT+CGG - chr7_1:66376220-66376239 Msa1031660:CDS 40.0%
CATACCATGAATTGTGGAAG+TGG + chr7_1:66376341-66376360 None:intergenic 40.0%
CTACTTCCTGGTTTCATGAA+CGG - chr7_1:66376534-66376553 Msa1031660:intron 40.0%
TACTTCCTGGTTTCATGAAC+GGG - chr7_1:66376535-66376554 Msa1031660:intron 40.0%
TGGCTGAACAAATTGTTGCT+TGG + chr7_1:66376567-66376586 None:intergenic 40.0%
CTCTGAATGTGCTTCCATAT+TGG + chr7_1:66376587-66376606 None:intergenic 40.0%
GCTAACGATTCCAGAAGAAA+TGG - chr7_1:66376693-66376712 Msa1031660:intron 40.0%
! CCGGTCACTTTATTACTCAA+AGG - chr7_1:66376792-66376811 Msa1031660:intron 40.0%
CATCATCAAATCCTATAGCG+AGG - chr7_1:66376923-66376942 Msa1031660:intron 40.0%
AACACTAGCGGTCAATTTGT+TGG - chr7_1:66377161-66377180 Msa1031660:intron 40.0%
! CTGGTTGCTTTAATGTGAAG+TGG - chr7_1:66377252-66377271 Msa1031660:intron 40.0%
ATGTGCCTTAACACACCATT+TGG + chr7_1:66377296-66377315 None:intergenic 40.0%
GTATCCCTGCTATTAGTTAC+AGG + chr7_1:66377344-66377363 None:intergenic 40.0%
AACTAATAGCAGGGATACTC+AGG - chr7_1:66377346-66377365 Msa1031660:intron 40.0%
TCTGCAGGTTAAGTTTGAGA+AGG - chr7_1:66377449-66377468 Msa1031660:intron 40.0%
CTGCAGGTTAAGTTTGAGAA+GGG - chr7_1:66377450-66377469 Msa1031660:intron 40.0%
CAAAACAAAGCGAACTAAGC+AGG + chr7_1:66377642-66377661 None:intergenic 40.0%
!!! CTGCTTAGTTCGCTTTGTTT+TGG - chr7_1:66377640-66377659 Msa1031660:intron 40.0%
TGTAAGAGCTTGTGTGGTAT+TGG - chr7_1:66377671-66377690 Msa1031660:intron 40.0%
!! TTGTTGACCTGTTTTGAGCA+AGG + chr7_1:66378009-66378028 None:intergenic 40.0%
TTGCTCAAAACAGGTCAACA+AGG - chr7_1:66378008-66378027 Msa1031660:intron 40.0%
CGAGCCAAATGTTATATCAC+TGG + chr7_1:66378034-66378053 None:intergenic 40.0%
AAGGTTGTAGCAAGAGACTT+GGG + chr7_1:66378066-66378085 None:intergenic 40.0%
ATTCAGAGGTCCTGTTAGAA+AGG - chr7_1:66378130-66378149 Msa1031660:intron 40.0%
TCTTCTCAGTGCTTTAGTCA+TGG - chr7_1:66378286-66378305 Msa1031660:intron 40.0%
TAATCAACCTTGGTATGGAG+TGG - chr7_1:66378345-66378364 Msa1031660:intron 40.0%
AAAGTTGAAGAGGGGAAGCA+AGG + chr7_1:66373590-66373609 None:intergenic 45.0%
GCATCTCCAACGATAGTCTT+GGG + chr7_1:66374100-66374119 None:intergenic 45.0%
AGCATCTCCAACGATAGTCT+TGG + chr7_1:66374101-66374120 None:intergenic 45.0%
CATTGGGAGGATTCAAACCT+GGG + chr7_1:66374799-66374818 None:intergenic 45.0%
!!! CTCCCAATGCCACTTTTTGT+GGG - chr7_1:66374810-66374829 Msa1031660:CDS 45.0%
AGCCCACAAAAAGTGGCATT+GGG + chr7_1:66374815-66374834 None:intergenic 45.0%
TAGCCCACAAAAAGTGGCAT+TGG + chr7_1:66374816-66374835 None:intergenic 45.0%
!! ATGGACTAGCCCACAAAAAG+TGG + chr7_1:66374822-66374841 None:intergenic 45.0%
AGCCTTGCTCTGCCTTTAAT+CGG - chr7_1:66374846-66374865 Msa1031660:CDS 45.0%
! TTTTGCCAATGGTGCAGCTA+AGG - chr7_1:66375019-66375038 Msa1031660:CDS 45.0%
TTTGCCAATGGTGCAGCTAA+GGG - chr7_1:66375020-66375039 Msa1031660:CDS 45.0%
!! ATTTCAGGTTATGACGGGCA+AGG - chr7_1:66375267-66375286 Msa1031660:CDS 45.0%
TCTGCCGAAGAACCATTTGA+TGG - chr7_1:66375415-66375434 Msa1031660:CDS 45.0%
ACCCTGTAAATAGATTCGGC+AGG + chr7_1:66375742-66375761 None:intergenic 45.0%
AACTCTCCAACTTCTGCTGA+TGG - chr7_1:66375915-66375934 Msa1031660:CDS 45.0%
TTTGCTCCGAACAAAACCAG+TGG - chr7_1:66375942-66375961 Msa1031660:CDS 45.0%
!!! TGTGGACCACTGGTTTTGTT+CGG + chr7_1:66375951-66375970 None:intergenic 45.0%
GCAGTTGACATTTCTCGTTG+TGG + chr7_1:66375969-66375988 None:intergenic 45.0%
TGCTCCATTGTCAGGATATC+AGG - chr7_1:66376157-66376176 Msa1031660:CDS 45.0%
GCTCCATTGTCAGGATATCA+GGG - chr7_1:66376158-66376177 Msa1031660:CDS 45.0%
AATCCCTACAGACGTGTCAT+TGG - chr7_1:66376214-66376233 Msa1031660:CDS 45.0%
GAAACCAATGACACGTCTGT+AGG + chr7_1:66376221-66376240 None:intergenic 45.0%
TCGGATAGACAGTCCAAACA+TGG - chr7_1:66376239-66376258 Msa1031660:CDS 45.0%
GATAGACAGTCCAAACATGG+AGG - chr7_1:66376242-66376261 Msa1031660:CDS 45.0%
ACAGTCCAAACATGGAGGAA+AGG - chr7_1:66376247-66376266 Msa1031660:CDS 45.0%
TCCAAACATGGAGGAAAGGT+TGG - chr7_1:66376251-66376270 Msa1031660:CDS 45.0%
TCCAACCTTTCCTCCATGTT+TGG + chr7_1:66376255-66376274 None:intergenic 45.0%
GGTTGGATTATCTTCCCAAG+TGG - chr7_1:66376268-66376287 Msa1031660:intron 45.0%
TCAGCCACTTCCACAATTCA+TGG - chr7_1:66376334-66376353 Msa1031660:intron 45.0%
GCACAGTTGCACTTCGAAAA+AGG + chr7_1:66376376-66376395 None:intergenic 45.0%
AATGGTTCCAGACATCCATC+TGG - chr7_1:66376504-66376523 Msa1031660:intron 45.0%
TTCCAGACATCCATCTGGAA+TGG - chr7_1:66376509-66376528 Msa1031660:intron 45.0%
TTCCATTCCAGATGGATGTC+TGG + chr7_1:66376514-66376533 None:intergenic 45.0%
GGAAGTAGTTCCATTCCAGA+TGG + chr7_1:66376522-66376541 None:intergenic 45.0%
! TCTGGAATGGAACTACTTCC+TGG - chr7_1:66376522-66376541 Msa1031660:intron 45.0%
TACATCCCGTTCATGAAACC+AGG + chr7_1:66376543-66376562 None:intergenic 45.0%
CGTTATGGGTCTTCTGCATA+CGG - chr7_1:66376615-66376634 Msa1031660:intron 45.0%
! TCTGCATACGGATCTAGAAC+AGG - chr7_1:66376627-66376646 Msa1031660:intron 45.0%
GATAACAAGTACAGAGCCAC+AGG - chr7_1:66376657-66376676 Msa1031660:intron 45.0%
AAGTACAGAGCCACAGGTAA+TGG - chr7_1:66376663-66376682 Msa1031660:intron 45.0%
AGCAACATAGCCATTACCTG+TGG + chr7_1:66376676-66376695 None:intergenic 45.0%
GATTCCAGAAGAAATGGGGA+TGG - chr7_1:66376699-66376718 Msa1031660:CDS 45.0%
GAAACCATCCCCATTTCTTC+TGG + chr7_1:66376706-66376725 None:intergenic 45.0%
AGTAATAAAGTGACCGGTCC+AGG + chr7_1:66376789-66376808 None:intergenic 45.0%
ACTTCGTCATCACTCTTCAC+TGG + chr7_1:66376828-66376847 None:intergenic 45.0%
ATGAACATCGTCCTCGCTAT+AGG + chr7_1:66376937-66376956 None:intergenic 45.0%
! TCCAGCTTTTTGTTGCCGTT+GGG + chr7_1:66376993-66377012 None:intergenic 45.0%
! ATCCAGCTTTTTGTTGCCGT+TGG + chr7_1:66376994-66377013 None:intergenic 45.0%
AAAGCTGGATGCTGCATATC+AGG - chr7_1:66377004-66377023 Msa1031660:CDS 45.0%
! GTTGGTTTAGCTGAGATGAC+TGG - chr7_1:66377179-66377198 Msa1031660:intron 45.0%
! TTTAGCTGAGATGACTGGTC+CGG - chr7_1:66377184-66377203 Msa1031660:intron 45.0%
!! AACTGTAGAGTATTGGCAGC+AGG - chr7_1:66377220-66377239 Msa1031660:intron 45.0%
!! TAGAGTATTGGCAGCAGGAT+AGG - chr7_1:66377225-66377244 Msa1031660:intron 45.0%
TAATAGCAGGGATACTCAGG+AGG - chr7_1:66377349-66377368 Msa1031660:intron 45.0%
CAAGGTTGTAGCAAGAGACT+TGG + chr7_1:66378067-66378086 None:intergenic 45.0%
GAGGTCCTGTTAGAAAGGAA+TGG - chr7_1:66378135-66378154 Msa1031660:intron 45.0%
GTTAACTCCACTCCATACCA+AGG + chr7_1:66378355-66378374 None:intergenic 45.0%
!! TAATTTAATAATATATAATG+TGG - chr7_1:66378401-66378420 Msa1031660:intron 5.0%
CCGCCAAGAACGTGAAGTTT+GGG + chr7_1:66373509-66373528 None:intergenic 50.0%
CCCAAACTTCACGTTCTTGG+CGG - chr7_1:66373506-66373525 Msa1031660:three_prime_UTR 50.0%
! AGGAGCAACAGAAGGCATGA+TGG + chr7_1:66373553-66373572 None:intergenic 50.0%
TCAGAGGAAGGAGCAACAGA+AGG + chr7_1:66373561-66373580 None:intergenic 50.0%
GCAAGGATACGTTCAGAGGA+AGG + chr7_1:66373573-66373592 None:intergenic 50.0%
GGAAGCAAGGATACGTTCAG+AGG + chr7_1:66373577-66373596 None:intergenic 50.0%
AGATGCTGAGCCAGTGAAGA+AGG - chr7_1:66374114-66374133 Msa1031660:intron 50.0%
CTCATGGGTCTACATGGCTT+TGG + chr7_1:66374292-66374311 None:intergenic 50.0%
TTCAAACCTGGGACCTTGAG+AGG + chr7_1:66374788-66374807 None:intergenic 50.0%
GCATTGGGAGGATTCAAACC+TGG + chr7_1:66374800-66374819 None:intergenic 50.0%
! CCACAAAAAGTGGCATTGGG+AGG + chr7_1:66374812-66374831 None:intergenic 50.0%
!!! CCTCCCAATGCCACTTTTTG+TGG - chr7_1:66374809-66374828 Msa1031660:CDS 50.0%
GTCCGATTAAAGGCAGAGCA+AGG + chr7_1:66374851-66374870 None:intergenic 50.0%
GATTGATCCCCCAGATTGGT+CGG - chr7_1:66374891-66374910 Msa1031660:intron 50.0%
TCCAATGACCGACCAATCTG+GGG + chr7_1:66374902-66374921 None:intergenic 50.0%
GTCCAATGACCGACCAATCT+GGG + chr7_1:66374903-66374922 None:intergenic 50.0%
! AGATTGGTCGGTCATTGGAC+CGG - chr7_1:66374903-66374922 Msa1031660:intron 50.0%
GCTGCACCATTGGCAAAAAC+AGG + chr7_1:66375017-66375036 None:intergenic 50.0%
TTGCCAATGGTGCAGCTAAG+GGG - chr7_1:66375021-66375040 Msa1031660:CDS 50.0%
!! GTTATGACGGGCAAGGAGAT+TGG - chr7_1:66375274-66375293 Msa1031660:CDS 50.0%
ATGGTGTGTAGCCATAGCCT+TGG + chr7_1:66375797-66375816 None:intergenic 50.0%
GGCTATGGCTACACACCATA+TGG - chr7_1:66375798-66375817 Msa1031660:CDS 50.0%
GGTGAAGCATACGCTCCATA+TGG + chr7_1:66375816-66375835 None:intergenic 50.0%
CATTTCTCGTTGTGGACCAC+TGG + chr7_1:66375961-66375980 None:intergenic 50.0%
GGACCCTGATATCCTGACAA+TGG + chr7_1:66376164-66376183 None:intergenic 50.0%
TGTCAGGATATCAGGGTCCA+AGG - chr7_1:66376165-66376184 Msa1031660:CDS 50.0%
GGTCCAAGGTTGAGTACTCA+TGG - chr7_1:66376179-66376198 Msa1031660:CDS 50.0%
GCACCATGAGTACTCAACCT+TGG + chr7_1:66376185-66376204 None:intergenic 50.0%
TCAGAACTCTTGGCAGCTCT+AGG + chr7_1:66376747-66376766 None:intergenic 50.0%
AAGCGTCAAAAGTCCTGGAC+CGG - chr7_1:66376773-66376792 Msa1031660:intron 50.0%
CGTCATCACTCTTCACTGGA+AGG + chr7_1:66376824-66376843 None:intergenic 50.0%
! TGATGACGAAGTAGTCCCTC+TGG - chr7_1:66376836-66376855 Msa1031660:intron 50.0%
TCCCAACGGCAACAAAAAGC+TGG - chr7_1:66376989-66377008 Msa1031660:CDS 50.0%
GATGCTGCATATCAGGAAGC+TGG - chr7_1:66377011-66377030 Msa1031660:intron 50.0%
TCCGTACAGGTCAACACTAG+CGG - chr7_1:66377149-66377168 Msa1031660:intron 50.0%
!! ACCGCTAGTGTTGACCTGTA+CGG + chr7_1:66377153-66377172 None:intergenic 50.0%
!! AGTATTGGCAGCAGGATAGG+TGG - chr7_1:66377228-66377247 Msa1031660:intron 50.0%
AGTTGAAAGGGAGTCGCTCA+TGG + chr7_1:66377408-66377427 None:intergenic 50.0%
! TCTCCTGAGTGGTCTTTTCG+CGG + chr7_1:66377551-66377570 None:intergenic 50.0%
GGAGCAGCAGTTACCAAAAC+AGG - chr7_1:66377581-66377600 Msa1031660:intron 50.0%
ACAGGGGAAGGTGAATTCAG+AGG - chr7_1:66378116-66378135 Msa1031660:intron 50.0%
GCCGCCAAGAACGTGAAGTT+TGG + chr7_1:66373510-66373529 None:intergenic 55.0%
TCGCAGCCCAAGACTATCGT+TGG - chr7_1:66374091-66374110 Msa1031660:intron 55.0%
! CTTGAGAGGAGCACACTCGA+AGG + chr7_1:66374774-66374793 None:intergenic 55.0%
CTTCGAGTGTGCTCCTCTCA+AGG - chr7_1:66374772-66374791 Msa1031660:CDS 55.0%
AGGCAGAGCAAGGCTCTCAA+TGG + chr7_1:66374841-66374860 None:intergenic 55.0%
! GTAGTGGGGGGTCCGATTAA+AGG + chr7_1:66374861-66374880 None:intergenic 55.0%
TTAATCGGACCCCCCACTAC+TGG - chr7_1:66374861-66374880 Msa1031660:intron 55.0%
AATCCCACCGTCCAGTAGTG+GGG + chr7_1:66374875-66374894 None:intergenic 55.0%
CAATCCCACCGTCCAGTAGT+GGG + chr7_1:66374876-66374895 None:intergenic 55.0%
TCAATCCCACCGTCCAGTAG+TGG + chr7_1:66374877-66374896 None:intergenic 55.0%
GTGGGATTGATCCCCCAGAT+TGG - chr7_1:66374887-66374906 Msa1031660:intron 55.0%
CCAATGACCGACCAATCTGG+GGG + chr7_1:66374901-66374920 None:intergenic 55.0%
GGTCCAATGACCGACCAATC+TGG + chr7_1:66374904-66374923 None:intergenic 55.0%
TGTCCCCTTAGCTGCACCAT+TGG + chr7_1:66375027-66375046 None:intergenic 55.0%
AATGGTGCAGCTAAGGGGAC+AGG - chr7_1:66375026-66375045 Msa1031660:CDS 55.0%
CTTGAGTCATCCCTCCATCG+AGG + chr7_1:66375323-66375342 None:intergenic 55.0%
CCTGACAATGGAGCACAAGC+TGG + chr7_1:66376152-66376171 None:intergenic 55.0%
CCAGCTTGTGCTCCATTGTC+AGG - chr7_1:66376149-66376168 Msa1031660:CDS 55.0%
GTTTGGGCAAGCACTCCCAA+CGG - chr7_1:66376975-66376994 Msa1031660:CDS 55.0%
GCTGCATATCAGGAAGCTGG+TGG - chr7_1:66377014-66377033 Msa1031660:intron 55.0%
! CTCCTGAGTGGTCTTTTCGC+GGG + chr7_1:66377550-66377569 None:intergenic 55.0%
AGCTACTGCAGATGCAGCAC+AGG - chr7_1:66378098-66378117 Msa1031660:intron 55.0%
GCTACTGCAGATGCAGCACA+GGG - chr7_1:66378099-66378118 Msa1031660:intron 55.0%
CTACTGCAGATGCAGCACAG+GGG - chr7_1:66378100-66378119 Msa1031660:intron 55.0%
GGAGCACACTCGAAGGTCTC+TGG + chr7_1:66374767-66374786 None:intergenic 60.0%
TGTGCTCCTCTCAAGGTCCC+AGG - chr7_1:66374779-66374798 Msa1031660:CDS 60.0%
ATCCCACCGTCCAGTAGTGG+GGG + chr7_1:66374874-66374893 None:intergenic 60.0%
! CCCCCAGATTGGTCGGTCAT+TGG - chr7_1:66374898-66374917 Msa1031660:intron 60.0%
GACGGGCAAGGAGATTGGAG+TGG - chr7_1:66375279-66375298 Msa1031660:CDS 60.0%
TGGCAGCAGGATAGGTGGAC+TGG - chr7_1:66377233-66377252 Msa1031660:intron 60.0%
GTCCCGCGAAAAGACCACTC+AGG - chr7_1:66377545-66377564 Msa1031660:intron 60.0%
TGCAGATGCAGCACAGGGGA+AGG - chr7_1:66378104-66378123 Msa1031660:intron 60.0%
TCGGACCCCCCACTACTGGA+CGG - chr7_1:66374865-66374884 Msa1031660:intron 65.0%
ACCCCCCACTACTGGACGGT+GGG - chr7_1:66374869-66374888 Msa1031660:intron 65.0%
! TCCCACCGTCCAGTAGTGGG+GGG + chr7_1:66374873-66374892 None:intergenic 65.0%
GACCCCCCACTACTGGACGG+TGG - chr7_1:66374868-66374887 Msa1031660:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 66373465 66378572 66373465 ID=Msa1031660;Name=Msa1031660
chr7_1 mRNA 66373465 66378572 66373465 ID=Msa1031660-mRNA-1;Parent=Msa1031660;Name=Msa1031660-mRNA-1;_AED=0.03;_eAED=0.03;_QI=90|0.87|0.88|1|1|1|9|375|662
chr7_1 exon 66373465 66374016 66373465 ID=Msa1031660-mRNA-1:exon:14911;Parent=Msa1031660-mRNA-1
chr7_1 exon 66374435 66374581 66374435 ID=Msa1031660-mRNA-1:exon:14910;Parent=Msa1031660-mRNA-1
chr7_1 exon 66374667 66374879 66374667 ID=Msa1031660-mRNA-1:exon:14909;Parent=Msa1031660-mRNA-1
chr7_1 exon 66374976 66375539 66374976 ID=Msa1031660-mRNA-1:exon:14908;Parent=Msa1031660-mRNA-1
chr7_1 exon 66375682 66376278 66375682 ID=Msa1031660-mRNA-1:exon:14907;Parent=Msa1031660-mRNA-1
chr7_1 exon 66376696 66376763 66376696 ID=Msa1031660-mRNA-1:exon:14906;Parent=Msa1031660-mRNA-1
chr7_1 exon 66376924 66377029 66376924 ID=Msa1031660-mRNA-1:exon:14905;Parent=Msa1031660-mRNA-1
chr7_1 exon 66377902 66377990 66377902 ID=Msa1031660-mRNA-1:exon:14904;Parent=Msa1031660-mRNA-1
chr7_1 exon 66378455 66378572 66378455 ID=Msa1031660-mRNA-1:exon:14903;Parent=Msa1031660-mRNA-1
chr7_1 five_prime_UTR 66378483 66378572 66378483 ID=Msa1031660-mRNA-1:five_prime_utr;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66378455 66378482 66378455 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66377902 66377990 66377902 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66376924 66377029 66376924 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66376696 66376763 66376696 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66375682 66376278 66375682 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66374976 66375539 66374976 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66374667 66374879 66374667 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66374435 66374581 66374435 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 CDS 66373840 66374016 66373840 ID=Msa1031660-mRNA-1:cds;Parent=Msa1031660-mRNA-1
chr7_1 three_prime_UTR 66373465 66373839 66373465 ID=Msa1031660-mRNA-1:three_prime_utr;Parent=Msa1031660-mRNA-1
Gene Sequence

>Msa1031660

ATGCCTTCTGTTGCTCCTTCCTCTGAACCTACTATAGAAGCTGCAAGTTTACTGCAGAATTTGTCTCTGGATTCGCAGCCCAAGACTATCGTTGGAGATGCTGAGCCAGTGAAGAAGAATGGACCTGTTTTTGCCAATGGTGCAGCTAAGGGGACAGGCAAGCCATTCAATCCAAATCCAAGCTATGTTCCAAATGGATACCCTTCTACATATTATTATGGAGGTTATGACGGGCAAGGAGATTGGAGTGGTTATTCCAATTATGTGAACCTCGATGGAGGGATGACTCAAGGTGTTTATGGGGATAACTGCTCTTATATGTATCACCAAGGCTATGGCTACACACCATATGGAGCGTATGCTTCACCAAATTCCTCCTCTCCAATAGTTCAACATGATGGTCAGATGTATGGGCTGCAACAGTATCAGTATCCCTGTTCTTATTACAACTCTCCAACTTCTGCTGATGGATCTTTTGCTCCGAACAAAACCAGTGGTCCACAACGAGAAATGTCAACTGCTGTTAATGCGGATCGTATTCCTTCAAATGTTATGAATAAAGGAAACTCTGTTAGCATGGTCAATGGTGATTGTACAAATCAAAATGGGTTGAAGGCATTTATGACAAGTTCCCAGCACACATCTTTGAATACAAGGGATTCTTATCAAGGGTCTAGCTTGCCAGCTTGTGCTCCATTGTCAGGATATCAGGGTCCAAGGTTGAGTACTCATGGTGCACAGTCAGCAATCCCTACAGACGTGTCATTGGTTTCGGATAGACAGTCCAAACATGGAGGAAAGGTTGGATTATCTTCCCAAGTGGCAAATATCAAAGATTTCTCATCTCAAAGGAATCAAAGACACTCTCAGCCACTTCCACAATTCATGAACATGAATGGTTCCAGACATCCATCTGGAATGGAACTACTTCCTGGTTTCATGAACGGGATGTATCCAAGCAACAATTTGTTCAGCCAATATGGAAGCACATTCAGAGCTAATTCTCGTTATGGGTCTTCTGCATACGGATCTAGAACAGGTTCTTTTGATAACAAGTACAGAGCCACAGGTAATGGCTATGTTGCTAACGATTCCAGAAGAAATGGGGATGGTTTCAGTGAGCTAAATAAGGGACCTAGAGCTGCCAAGAGTTCTGATAATAAAAGCGTCAAAAGTCCTGGACCGGTCACTTTATTACTCAAAGGGCAGAACCTTCCAGTGAAGAGTGATGACGAAGTAGTCCCTCTGGTTCTGAATAAAGAACAATACAATGGAGAAGATTTGTCTGAGAATTATTCCGACGCAAAATTTTTCATCATCAAATCCTATAGCGAGGACGATGTTCATAAAAGCATAAAATATAGTGTTTGGGCAAGCACTCCCAACGGCAACAAAAAGCTGGATGCTGCATATCAGGAAGCTGGTGGCTGTCCTATATTTTTGTTATTTTCGGTCAACACTAGCGGTCAATTTGTTGGTTTAGCTGAGATGACTGGTCCGGTTGATTTTGATAAAACTGTAGAGTATTGGCAGCAGGATAGGTGGACTGGTTGCTTTAATGTGAAGTGGCATATCATTAAGGATATTCCAAATGGTGTGTTAAGGCACATAACACTAGAAAACAATGAAAACAAACCTGTAACTAATAGCAGGGATACTCAGGAGGTTAAGTTTGAGAAGGGTGTTCAAATTGTCAAAATTTTCAAGGAGCATGCAAGCAAAACAAGTATATTGGATGATTTTGGGTTTTATGAGTCCCGCGAAAAGACCACTCAGGAGAGAAAATTTAAGGAGCAGCAGTTACCAAAACAGGTCAACAAGGCCAGTGATATAACATTTGGCTCGGTTACATTACCCAAGTCTCTTGCTACAACCTTGATGAAAGAATCAGCTACTGCAGATGCAGCACAGGGGAAGGTGAATTCAGAGGTCCTGTTAGAAAGGAATGGATCAACCCCAGCATTTGAAGATTCTTCTAAGAGCAGTTAA

Protein sequence

>Msa1031660

MPSVAPSSEPTIEAASLLQNLSLDSQPKTIVGDAEPVKKNGPVFANGAAKGTGKPFNPNPSYVPNGYPSTYYYGGYDGQGDWSGYSNYVNLDGGMTQGVYGDNCSYMYHQGYGYTPYGAYASPNSSSPIVQHDGQMYGLQQYQYPCSYYNSPTSADGSFAPNKTSGPQREMSTAVNADRIPSNVMNKGNSVSMVNGDCTNQNGLKAFMTSSQHTSLNTRDSYQGSSLPACAPLSGYQGPRLSTHGAQSAIPTDVSLVSDRQSKHGGKVGLSSQVANIKDFSSQRNQRHSQPLPQFMNMNGSRHPSGMELLPGFMNGMYPSNNLFSQYGSTFRANSRYGSSAYGSRTGSFDNKYRATGNGYVANDSRRNGDGFSELNKGPRAAKSSDNKSVKSPGPVTLLLKGQNLPVKSDDEVVPLVLNKEQYNGEDLSENYSDAKFFIIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAGGCPIFLLFSVNTSGQFVGLAEMTGPVDFDKTVEYWQQDRWTGCFNVKWHIIKDIPNGVLRHITLENNENKPVTNSRDTQEVKFEKGVQIVKIFKEHASKTSILDDFGFYESREKTTQERKFKEQQLPKQVNKASDITFGSVTLPKSLATTLMKESATADAAQGKVNSEVLLERNGSTPAFEDSSKSS*