Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1070720 | ABN09800.1 | 98.489 | 662 | 10 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1350 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1070720 | sp|Q9LJE5|ECT2_ARATH | 43.913 | 690 | 313 | 23 | 1 | 652 | 1 | 654 | 3.69e-146 | 442 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1070720 | A2Q5N8 | 98.489 | 662 | 10 | 0 | 1 | 662 | 1 | 662 | 0.0 | 1350 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0072420 | Msa1070720 | 0.850671 | 1.460204e-60 | -8.615850e-47 |
Msa0079070 | Msa1070720 | 0.802666 | 5.035092e-49 | -8.615850e-47 |
Msa0101500 | Msa1070720 | -0.870222 | 1.717897e-66 | -8.615850e-47 |
Msa0115790 | Msa1070720 | 0.836651 | 8.259143e-57 | -8.615850e-47 |
Msa0631170 | Msa1070720 | 0.800573 | 1.352831e-48 | -8.615850e-47 |
Msa0665860 | Msa1070720 | 0.830703 | 2.529685e-55 | -8.615850e-47 |
Msa0692980 | Msa1070720 | 0.819394 | 1.188613e-52 | -8.615850e-47 |
Msa0709400 | Msa1070720 | 0.810657 | 1.033667e-50 | -8.615850e-47 |
Msa0765080 | Msa1070720 | 0.842572 | 2.383089e-58 | -8.615850e-47 |
Msa0806790 | Msa1070720 | 0.814910 | 1.210940e-51 | -8.615850e-47 |
Msa0813530 | Msa1070720 | 0.824319 | 8.607981e-54 | -8.615850e-47 |
Msa0820650 | Msa1070720 | 0.801222 | 9.967157e-49 | -8.615850e-47 |
Msa0123560 | Msa1070720 | 0.802769 | 4.793946e-49 | -8.615850e-47 |
Msa0127650 | Msa1070720 | 0.810493 | 1.121396e-50 | -8.615850e-47 |
Msa0150300 | Msa1070720 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
Msa0168310 | Msa1070720 | 0.810045 | 1.401084e-50 | -8.615850e-47 |
Msa0204960 | Msa1070720 | 0.812652 | 3.806523e-51 | -8.615850e-47 |
Msa0220400 | Msa1070720 | -0.800298 | 1.538995e-48 | -8.615850e-47 |
Msa0229230 | Msa1070720 | 0.811588 | 6.495525e-51 | -8.615850e-47 |
Msa0231200 | Msa1070720 | 0.806841 | 6.762778e-50 | -8.615850e-47 |
Msa0379790 | Msa1070720 | -0.819828 | 9.459345e-53 | -8.615850e-47 |
Msa0386800 | Msa1070720 | 0.809503 | 1.832015e-50 | -8.615850e-47 |
Msa0398670 | Msa1070720 | 0.861048 | 1.348827e-63 | -8.615850e-47 |
Msa0454360 | Msa1070720 | 0.803973 | 2.699376e-49 | -8.615850e-47 |
Msa0458460 | Msa1070720 | 0.810201 | 1.296965e-50 | -8.615850e-47 |
Msa1031660 | Msa1070720 | 0.984723 | 2.138226e-161 | -8.615850e-47 |
Msa1044680 | Msa1070720 | 0.827718 | 1.339896e-54 | -8.615850e-47 |
Msa1070720 | Msa1105640 | 0.812584 | 3.939258e-51 | -8.615850e-47 |
Msa1070720 | Msa1117240 | 0.805894 | 1.070942e-49 | -8.615850e-47 |
Msa1070720 | Msa1118860 | 0.929431 | 7.015884e-93 | -8.615850e-47 |
Msa1070720 | Msa1130980 | 0.813727 | 2.211471e-51 | -8.615850e-47 |
Msa1070720 | Msa1148910 | 0.816252 | 6.087523e-52 | -8.615850e-47 |
Msa1070720 | Msa1165230 | 0.817064 | 4.002744e-52 | -8.615850e-47 |
Msa1070720 | Msa1174720 | 0.801514 | 8.684744e-49 | -8.615850e-47 |
Msa1070720 | Msa1174740 | 0.811690 | 6.172072e-51 | -8.615850e-47 |
Msa1070720 | Msa1181910 | 0.806394 | 8.404422e-50 | -8.615850e-47 |
Msa1070720 | Msa1184230 | 0.808228 | 3.434234e-50 | -8.615850e-47 |
Msa1070720 | Msa1206460 | 0.801521 | 8.658460e-49 | -8.615850e-47 |
Msa1070720 | Msa1211230 | -0.817899 | 2.595657e-52 | -8.615850e-47 |
Msa1070720 | Msa1211420 | -0.800248 | 1.575760e-48 | -8.615850e-47 |
Msa1070720 | Msa1213890 | 0.803792 | 2.943693e-49 | -8.615850e-47 |
Msa1070720 | Msa1213980 | 0.804416 | 2.182659e-49 | -8.615850e-47 |
Msa1070720 | Msa1228040 | 0.829849 | 4.089863e-55 | -8.615850e-47 |
Msa1070720 | Msa1244600 | 0.812525 | 4.057359e-51 | -8.615850e-47 |
Msa1070720 | Msa1279400 | 0.801789 | 7.629396e-49 | -8.615850e-47 |
Msa1070720 | Msa1299400 | -0.800250 | 1.573902e-48 | -8.615850e-47 |
Msa1070720 | Msa1315060 | 0.804569 | 2.028668e-49 | -8.615850e-47 |
Msa1070720 | Msa1331050 | -0.818791 | 1.630422e-52 | -8.615850e-47 |
Msa1070720 | Msa1341060 | 0.818347 | 2.055142e-52 | -8.615850e-47 |
Msa1070720 | Msa1364350 | -0.810782 | 9.714402e-51 | -8.615850e-47 |
Msa1070720 | Msa1384760 | -0.846643 | 1.908810e-59 | -8.615850e-47 |
Msa1070720 | Msa1390440 | 0.810524 | 1.104664e-50 | -8.615850e-47 |
Msa1070720 | Msa1392980 | 0.837684 | 4.495926e-57 | -8.615850e-47 |
Msa1070720 | Msa1417440 | -0.806676 | 7.327948e-50 | -8.615850e-47 |
Msa1070720 | Msa1418340 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
Msa1070720 | Msa1419690 | 0.821745 | 3.428539e-53 | -8.615850e-47 |
Msa1070720 | Msa1434420 | -0.819974 | 8.758984e-53 | -8.615850e-47 |
Msa1070720 | Msa1435390 | 0.816662 | 4.926337e-52 | -8.615850e-47 |
Msa1070720 | Msa1440200 | 0.809521 | 1.816113e-50 | -8.615850e-47 |
Msa1070720 | Msa1440930 | 0.807122 | 5.898079e-50 | -8.615850e-47 |
Msa1070720 | Msa1443740 | 0.816099 | 6.584128e-52 | -8.615850e-47 |
Msa1070720 | Msa1453610 | 0.821735 | 3.447328e-53 | -8.615850e-47 |
Msa0240920 | Msa1070720 | 0.823420 | 1.398481e-53 | -8.615850e-47 |
Msa0249860 | Msa1070720 | 0.830729 | 2.492513e-55 | -8.615850e-47 |
Msa0272300 | Msa1070720 | 0.815706 | 8.056949e-52 | -8.615850e-47 |
Msa0274310 | Msa1070720 | -0.848130 | 7.458083e-60 | -8.615850e-47 |
Msa0300680 | Msa1070720 | 0.808794 | 2.599558e-50 | -8.615850e-47 |
Msa0318680 | Msa1070720 | 0.801474 | 8.850975e-49 | -8.615850e-47 |
Msa0323270 | Msa1070720 | 0.807763 | 4.312506e-50 | -8.615850e-47 |
Msa0343500 | Msa1070720 | 0.833861 | 4.180742e-56 | -8.615850e-47 |
Msa0493740 | Msa1070720 | 0.824184 | 9.263238e-54 | -8.615850e-47 |
Msa0512340 | Msa1070720 | 0.803560 | 3.288795e-49 | -8.615850e-47 |
Msa0527540 | Msa1070720 | 0.816808 | 4.568378e-52 | -8.615850e-47 |
Msa0530560 | Msa1070720 | 0.807575 | 4.727030e-50 | -8.615850e-47 |
Msa0531530 | Msa1070720 | 0.818385 | 2.015040e-52 | -8.615850e-47 |
Msa0549450 | Msa1070720 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
Msa0581010 | Msa1070720 | 0.827244 | 1.741166e-54 | -8.615850e-47 |
Msa0881360 | Msa1070720 | 0.804240 | 2.375284e-49 | -8.615850e-47 |
Msa0934850 | Msa1070720 | 0.813106 | 3.027924e-51 | -8.615850e-47 |
Msa0945110 | Msa1070720 | 0.806546 | 7.804870e-50 | -8.615850e-47 |
Msa0963270 | Msa1070720 | 0.829232 | 5.776900e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1070720 | MtrunA17_Chr7g0253191 | 97.885 | 662 | 10 | 1 | 1 | 662 | 1 | 658 | 0.0 | 1333 |
Msa1070720 | MtrunA17_Chr6g0461531 | 59.342 | 669 | 228 | 14 | 1 | 656 | 1 | 638 | 0.0 | 674 |
Msa1070720 | MtrunA17_Chr8g0380431 | 46.484 | 583 | 245 | 17 | 4 | 556 | 1 | 546 | 8.70e-138 | 414 |
Msa1070720 | MtrunA17_Chr4g0069011 | 36.929 | 547 | 256 | 19 | 71 | 597 | 25 | 502 | 1.06e-83 | 276 |
Msa1070720 | MtrunA17_Chr4g0000071 | 51.237 | 283 | 109 | 5 | 328 | 599 | 299 | 563 | 3.57e-83 | 275 |
Msa1070720 | MtrunA17_Chr2g0293641 | 35.552 | 571 | 279 | 19 | 47 | 597 | 35 | 536 | 8.14e-83 | 275 |
Msa1070720 | MtrunA17_Chr2g0309651 | 48.123 | 293 | 107 | 6 | 349 | 618 | 297 | 567 | 2.22e-81 | 268 |
Msa1070720 | MtrunA17_Chr2g0277111 | 46.850 | 254 | 102 | 5 | 358 | 595 | 214 | 450 | 6.43e-70 | 236 |
Msa1070720 | MtrunA17_Chr2g0292081 | 29.710 | 138 | 91 | 2 | 435 | 568 | 259 | 394 | 1.58e-12 | 70.9 |
Msa1070720 | MtrunA17_Chr8g0380421 | 60.000 | 50 | 19 | 1 | 555 | 604 | 2 | 50 | 1.88e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1070720 | AT3G13460.4 | 43.913 | 690 | 312 | 23 | 1 | 652 | 1 | 653 | 2.01e-147 | 443 |
Msa1070720 | AT3G13460.1 | 43.913 | 690 | 313 | 23 | 1 | 652 | 1 | 654 | 3.75e-147 | 442 |
Msa1070720 | AT3G13460.2 | 43.623 | 690 | 312 | 23 | 1 | 652 | 1 | 651 | 2.09e-145 | 438 |
Msa1070720 | AT1G55500.4 | 44.122 | 621 | 274 | 18 | 1 | 593 | 1 | 576 | 2.94e-129 | 394 |
Msa1070720 | AT1G55500.2 | 44.122 | 621 | 274 | 18 | 1 | 593 | 1 | 576 | 3.91e-129 | 394 |
Msa1070720 | AT1G55500.5 | 44.122 | 621 | 274 | 18 | 1 | 593 | 1 | 576 | 4.29e-129 | 394 |
Msa1070720 | AT1G55500.6 | 46.388 | 526 | 232 | 13 | 81 | 593 | 45 | 533 | 1.31e-122 | 376 |
Msa1070720 | AT1G55500.3 | 43.156 | 621 | 267 | 19 | 1 | 593 | 1 | 563 | 2.12e-120 | 371 |
Msa1070720 | AT1G55500.1 | 45.247 | 526 | 225 | 14 | 81 | 593 | 45 | 520 | 7.51e-114 | 353 |
Msa1070720 | AT5G61020.2 | 56.711 | 298 | 114 | 6 | 366 | 654 | 193 | 484 | 3.67e-105 | 328 |
Msa1070720 | AT5G61020.1 | 56.711 | 298 | 114 | 6 | 366 | 654 | 195 | 486 | 4.02e-105 | 328 |
Msa1070720 | AT3G03950.2 | 45.802 | 393 | 142 | 11 | 221 | 600 | 76 | 410 | 2.29e-95 | 300 |
Msa1070720 | AT3G03950.1 | 45.802 | 393 | 142 | 11 | 221 | 600 | 77 | 411 | 3.25e-95 | 300 |
Msa1070720 | AT3G03950.3 | 45.802 | 393 | 142 | 11 | 221 | 600 | 80 | 414 | 3.37e-95 | 300 |
Msa1070720 | AT3G13060.3 | 58.974 | 234 | 81 | 2 | 370 | 599 | 322 | 544 | 6.01e-87 | 284 |
Msa1070720 | AT3G13060.6 | 58.974 | 234 | 81 | 2 | 370 | 599 | 322 | 544 | 6.01e-87 | 284 |
Msa1070720 | AT3G13060.4 | 58.974 | 234 | 81 | 2 | 370 | 599 | 334 | 556 | 7.24e-87 | 285 |
Msa1070720 | AT3G13060.2 | 58.974 | 234 | 81 | 2 | 370 | 599 | 344 | 566 | 7.94e-87 | 285 |
Msa1070720 | AT3G17330.2 | 53.648 | 233 | 90 | 2 | 373 | 597 | 116 | 338 | 3.56e-83 | 271 |
Msa1070720 | AT3G17330.1 | 53.648 | 233 | 90 | 2 | 373 | 597 | 218 | 440 | 4.01e-82 | 271 |
Msa1070720 | AT3G17330.3 | 53.648 | 233 | 90 | 2 | 373 | 597 | 218 | 440 | 4.01e-82 | 271 |
Msa1070720 | AT1G48110.2 | 57.692 | 208 | 80 | 1 | 398 | 597 | 284 | 491 | 9.44e-81 | 269 |
Msa1070720 | AT1G48110.1 | 57.692 | 208 | 80 | 1 | 398 | 597 | 284 | 491 | 9.44e-81 | 269 |
Msa1070720 | AT1G79270.2 | 62.963 | 189 | 62 | 1 | 417 | 597 | 288 | 476 | 1.26e-80 | 265 |
Msa1070720 | AT1G79270.4 | 62.963 | 189 | 62 | 1 | 417 | 597 | 288 | 476 | 1.26e-80 | 265 |
Msa1070720 | AT1G79270.3 | 62.963 | 189 | 62 | 1 | 417 | 597 | 288 | 476 | 1.26e-80 | 265 |
Msa1070720 | AT1G79270.1 | 62.963 | 189 | 62 | 1 | 417 | 597 | 303 | 491 | 2.02e-80 | 265 |
Msa1070720 | AT1G27960.3 | 46.350 | 274 | 118 | 3 | 370 | 639 | 215 | 463 | 2.51e-77 | 254 |
Msa1070720 | AT1G27960.1 | 46.350 | 274 | 118 | 3 | 370 | 639 | 289 | 537 | 2.17e-76 | 254 |
Msa1070720 | AT1G09810.2 | 52.301 | 239 | 90 | 5 | 367 | 595 | 133 | 357 | 2.46e-75 | 248 |
Msa1070720 | AT1G09810.1 | 52.301 | 239 | 90 | 5 | 367 | 595 | 175 | 399 | 3.79e-75 | 249 |
Msa1070720 | AT1G09810.3 | 52.301 | 239 | 90 | 5 | 367 | 595 | 156 | 380 | 3.93e-75 | 248 |
Msa1070720 | AT5G58190.2 | 56.221 | 217 | 82 | 4 | 376 | 588 | 275 | 482 | 7.58e-74 | 247 |
Msa1070720 | AT5G58190.1 | 56.221 | 217 | 82 | 4 | 376 | 588 | 274 | 481 | 7.63e-74 | 247 |
Msa1070720 | AT3G13460.3 | 38.685 | 517 | 264 | 20 | 1 | 485 | 1 | 496 | 1.89e-70 | 238 |
Msa1070720 | AT3G13060.1 | 59.162 | 191 | 63 | 2 | 370 | 556 | 344 | 523 | 4.30e-66 | 227 |
Msa1070720 | AT3G13060.5 | 50.000 | 120 | 45 | 2 | 370 | 485 | 344 | 452 | 6.71e-24 | 105 |
Msa1070720 | AT1G27960.2 | 43.307 | 127 | 44 | 2 | 370 | 492 | 289 | 391 | 2.53e-22 | 100 |
Msa1070720 | AT4G11970.5 | 30.675 | 163 | 100 | 4 | 435 | 587 | 72 | 231 | 1.16e-16 | 82.8 |
Msa1070720 | AT4G11970.2 | 30.675 | 163 | 100 | 4 | 435 | 587 | 72 | 231 | 1.65e-16 | 82.0 |
Msa1070720 | AT4G11970.3 | 30.675 | 163 | 100 | 4 | 435 | 587 | 72 | 231 | 2.24e-16 | 82.0 |
Msa1070720 | AT4G11970.1 | 30.675 | 163 | 100 | 4 | 435 | 587 | 72 | 231 | 1.30e-15 | 80.1 |
Msa1070720 | AT4G11970.4 | 30.675 | 163 | 100 | 4 | 435 | 587 | 72 | 231 | 1.30e-15 | 80.1 |
Find 199 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAAGTATATTGGATGATTT+TGG | 0.060809 | 7_2:-67030076 | Msa1070720:CDS |
ATCTATTTACAGGGTGTTTA+TGG | 0.107201 | 7_2:-67031825 | Msa1070720:intron |
ATTATATATTATTAAATTAA+AGG | 0.163460 | 7_2:+67029193 | None:intergenic |
TCCATCGAGGTTCACATAAT+TGG | 0.214038 | 7_2:+67032265 | None:intergenic |
TACCCTTCTACATATTATTA+TGG | 0.241612 | 7_2:-67032483 | Msa1070720:CDS |
GGTGATTGTACAAATCAAAA+TGG | 0.241748 | 7_2:-67031519 | Msa1070720:CDS |
TGCTCCATTGTCAGGATATC+AGG | 0.245871 | 7_2:-67031415 | Msa1070720:CDS |
CCTTCAAATGTTATGAATAA+AGG | 0.247263 | 7_2:-67031564 | Msa1070720:CDS |
ACTATTGGAGAGGAGGAATT+TGG | 0.249775 | 7_2:+67031738 | None:intergenic |
AAGACAACTGTTACCTGTTT+TGG | 0.251299 | 7_2:+67029995 | None:intergenic |
GTATCCCTGCTATTAGTTAC+AGG | 0.256157 | 7_2:+67030248 | None:intergenic |
AACAATTTGTTCAGCCAATA+TGG | 0.257330 | 7_2:-67031019 | Msa1070720:CDS |
GAAACCATCCCCATTTCTTC+TGG | 0.280993 | 7_2:+67030886 | None:intergenic |
CACTCAGGAGAGAAAATTTA+AGG | 0.287948 | 7_2:-67030029 | Msa1070720:CDS |
AAACCCAAACTTCACGTTCT+TGG | 0.296932 | 7_2:-67034060 | Msa1070720:five_prime_UTR |
TTTGGAACATAGCTTGGATT+TGG | 0.300599 | 7_2:+67032510 | None:intergenic |
TCCAACCTTTCCTCCATGTT+TGG | 0.303296 | 7_2:+67031320 | None:intergenic |
AAAGCATAAAATATAGTGTT+TGG | 0.303592 | 7_2:-67030631 | Msa1070720:CDS |
TGGTTTCAGTGAGCTAAATA+AGG | 0.312720 | 7_2:-67030870 | Msa1070720:CDS |
TTCAGAGCTAATTCTCGTTA+TGG | 0.316388 | 7_2:-67030989 | Msa1070720:CDS |
TGGAGAGTTGTAATAAGAAC+AGG | 0.317037 | 7_2:+67031671 | None:intergenic |
TGCAAGCAAAACAAGTATAT+TGG | 0.320217 | 7_2:-67030086 | Msa1070720:CDS |
CCTCCATAATAATATGTAGA+AGG | 0.333768 | 7_2:+67032480 | None:intergenic |
TTGATCCATTCCTTTCTAAC+AGG | 0.337233 | 7_2:+67029450 | None:intergenic |
GCCGCCAAGAACGTGAAGTT+TGG | 0.341615 | 7_2:+67034056 | None:intergenic |
TGACCATCATGTTGAACTAT+TGG | 0.349153 | 7_2:+67031723 | None:intergenic |
ATGAACATCGTCCTCGCTAT+AGG | 0.350006 | 7_2:+67030655 | None:intergenic |
TACAGACGTGTCATTGGTTT+CGG | 0.351571 | 7_2:-67031352 | Msa1070720:CDS |
AAAGCTGGATGCTGCATATC+AGG | 0.352355 | 7_2:-67030585 | Msa1070720:CDS |
TCAGAGCTAATTCTCGTTAT+GGG | 0.354713 | 7_2:-67030988 | Msa1070720:CDS |
CCTTTATTCATAACATTTGA+AGG | 0.361258 | 7_2:+67031564 | None:intergenic |
CCAGCTTGTGCTCCATTGTC+AGG | 0.364494 | 7_2:-67031423 | Msa1070720:CDS |
CTCTGAATGTGCTTCCATAT+TGG | 0.368310 | 7_2:+67031005 | None:intergenic |
TGTGAAGTGGCATATCATTA+AGG | 0.375415 | 7_2:-67030324 | Msa1070720:CDS |
TCTGGAATGGAACTACTTCC+TGG | 0.385736 | 7_2:-67031067 | Msa1070720:CDS |
TAGCTTGGATTTGGATTGAA+TGG | 0.393872 | 7_2:+67032519 | None:intergenic |
ATGTGCCTTAACACACCATT+TGG | 0.396675 | 7_2:+67030296 | None:intergenic |
TCTATTTACAGGGTGTTTAT+GGG | 0.397213 | 7_2:-67031824 | Msa1070720:intron |
CCGCCAAGAACGTGAAGTTT+GGG | 0.397458 | 7_2:+67034057 | None:intergenic |
CAACATGATGGTCAGATGTA+TGG | 0.399324 | 7_2:-67031714 | Msa1070720:CDS |
AATACAAGGGATTCTTATCA+AGG | 0.399657 | 7_2:-67031456 | Msa1070720:CDS |
GTTAAAATTACCTTCTTCAC+TGG | 0.403633 | 7_2:+67033439 | None:intergenic |
GCTAACGATTCCAGAAGAAA+TGG | 0.405139 | 7_2:-67030896 | Msa1070720:CDS |
TTATTTGCTGATATTTGTCT+TGG | 0.411427 | 7_2:-67029375 | Msa1070720:three_prime_UTR |
GTTATGACGGGCAAGGAGAT+TGG | 0.421700 | 7_2:-67032298 | Msa1070720:CDS |
TCAGCCACTTCCACAATTCA+TGG | 0.427777 | 7_2:-67031238 | Msa1070720:intron |
GGAGCAGCAGTTACCAAAAC+AGG | 0.428880 | 7_2:-67030008 | Msa1070720:intron |
CATTTCTCGTTGTGGACCAC+TGG | 0.431230 | 7_2:+67031614 | None:intergenic |
AAGCATAAAATATAGTGTTT+GGG | 0.433296 | 7_2:-67030630 | Msa1070720:CDS |
TATGTAGAAGGGTATCCATT+TGG | 0.438441 | 7_2:+67032492 | None:intergenic |
TTTACTGCAGAATTTGTCTC+TGG | 0.439723 | 7_2:-67033497 | Msa1070720:CDS |
TATCCATTTGGAACATAGCT+TGG | 0.442680 | 7_2:+67032504 | None:intergenic |
CTAACGATTCCAGAAGAAAT+GGG | 0.443518 | 7_2:-67030895 | Msa1070720:CDS |
AGTAATAAAGTGACCGGTCC+AGG | 0.445354 | 7_2:+67030803 | None:intergenic |
CGTTATGGGTCTTCTGCATA+CGG | 0.446971 | 7_2:-67030974 | Msa1070720:CDS |
AATCCCTACAGACGTGTCAT+TGG | 0.451053 | 7_2:-67031358 | Msa1070720:CDS |
TGTCCCCTTAGCTGCACCAT+TGG | 0.451239 | 7_2:+67032548 | None:intergenic |
TACAAATCAAAATGGGTTGA+AGG | 0.456277 | 7_2:-67031511 | Msa1070720:CDS |
AAGGCCAGTGATATAACATT+TGG | 0.456570 | 7_2:-67029563 | Msa1070720:CDS |
AGCTACTGCAGATGCAGCAC+AGG | 0.457344 | 7_2:-67029492 | Msa1070720:CDS |
TTGATAAAACTGTAGAGTAT+TGG | 0.458780 | 7_2:-67030376 | Msa1070720:CDS |
GGCTATGGCTACACACCATA+TGG | 0.460624 | 7_2:-67031774 | Msa1070720:CDS |
TTCCATTCCAGATGGATGTC+TGG | 0.464762 | 7_2:+67031078 | None:intergenic |
TAGAAGAATCTTCAAATGCT+GGG | 0.467118 | 7_2:+67029426 | None:intergenic |
ATCTTTGATATTTGCCACTT+GGG | 0.469425 | 7_2:+67031290 | None:intergenic |
AACACTAGCGGTCAATTTGT+TGG | 0.470135 | 7_2:-67030428 | Msa1070720:CDS |
AATCCAAGCTATGTTCCAAA+TGG | 0.471316 | 7_2:-67032507 | Msa1070720:CDS |
TTAGAAGAATCTTCAAATGC+TGG | 0.480666 | 7_2:+67029425 | None:intergenic |
TCCAATTATGTGAACCTCGA+TGG | 0.484174 | 7_2:-67032266 | Msa1070720:CDS |
GCATCTCCAACGATAGTCTT+GGG | 0.484717 | 7_2:+67033466 | None:intergenic |
TTGCTTAATCAACCTTGGTA+TGG | 0.485191 | 7_2:-67029250 | Msa1070720:three_prime_UTR |
AGCATCTCCAACGATAGTCT+TGG | 0.485443 | 7_2:+67033465 | None:intergenic |
CCCAAACTTCACGTTCTTGG+CGG | 0.486730 | 7_2:-67034057 | Msa1070720:five_prime_UTR |
AGTAGCTGATTCTTTCATCA+AGG | 0.488428 | 7_2:+67029508 | None:intergenic |
CGGTCACTTTATTACTCAAA+GGG | 0.489330 | 7_2:-67030796 | Msa1070720:CDS |
TCCAAACATGGAGGAAAGGT+TGG | 0.490704 | 7_2:-67031321 | Msa1070720:CDS |
GATTAATTTCAGGTTATGAC+GGG | 0.490922 | 7_2:-67032310 | Msa1070720:intron |
TAGAGTATTGGCAGCAGGAT+AGG | 0.491648 | 7_2:-67030364 | Msa1070720:CDS |
AAGTACAGAGCCACAGGTAA+TGG | 0.491834 | 7_2:-67030926 | Msa1070720:CDS |
TGGCTGAACAAATTGTTGCT+TGG | 0.494643 | 7_2:+67031025 | None:intergenic |
ATCATTAAGGATATTCCAAA+TGG | 0.497885 | 7_2:-67030311 | Msa1070720:CDS |
CAAGGTTGTAGCAAGAGACT+TGG | 0.499680 | 7_2:+67029526 | None:intergenic |
TTTGCCAATGGTGCAGCTAA+GGG | 0.501275 | 7_2:-67032552 | Msa1070720:CDS |
AATAAAAGCGTCAAAAGTCC+TGG | 0.504069 | 7_2:-67030821 | Msa1070720:CDS |
AATCTTTGATATTTGCCACT+TGG | 0.506182 | 7_2:+67031289 | None:intergenic |
AACTGTAGAGTATTGGCAGC+AGG | 0.506456 | 7_2:-67030369 | Msa1070720:CDS |
AGCACACATCTTTGAATACA+AGG | 0.507886 | 7_2:-67031470 | Msa1070720:CDS |
AATGGTGCAGCTAAGGGGAC+AGG | 0.508068 | 7_2:-67032546 | Msa1070720:CDS |
AACTAATAGCAGGGATACTC+AGG | 0.510719 | 7_2:-67030243 | Msa1070720:CDS |
TCTGCATACGGATCTAGAAC+AGG | 0.511633 | 7_2:-67030962 | Msa1070720:CDS |
AGTGAAAGAAGAATATAGAG+AGG | 0.513125 | 7_2:+67034096 | None:intergenic |
ATATTCCAAATGGTGTGTTA+AGG | 0.513546 | 7_2:-67030301 | Msa1070720:CDS |
ATTCAGAGGTCCTGTTAGAA+AGG | 0.515130 | 7_2:-67029460 | Msa1070720:CDS |
ACTTCGTCATCACTCTTCAC+TGG | 0.515319 | 7_2:+67030764 | None:intergenic |
TAAAACAGACTATCAGATTG+AGG | 0.515587 | 7_2:+67029155 | None:intergenic |
ACAAACCTGTAACTAATAGC+AGG | 0.516861 | 7_2:-67030253 | Msa1070720:CDS |
TCTTCTCAGTGCTTTAGTCA+TGG | 0.520668 | 7_2:-67029304 | Msa1070720:three_prime_UTR |
TGATTAATTTCAGGTTATGA+CGG | 0.522210 | 7_2:-67032311 | Msa1070720:intron |
AATGATCCATCAGCAGAAGT+TGG | 0.524552 | 7_2:+67031651 | None:intergenic |
AACTCTCCAACTTCTGCTGA+TGG | 0.525703 | 7_2:-67031657 | Msa1070720:CDS |
AATGGTTCCAGACATCCATC+TGG | 0.525830 | 7_2:-67031085 | Msa1070720:CDS |
TTGTATTCAAAGATGTGTGC+TGG | 0.527545 | 7_2:+67031472 | None:intergenic |
CTGCAGGTTAAGTTTGAGAA+GGG | 0.531094 | 7_2:-67030139 | Msa1070720:intron |
CCGGTCACTTTATTACTCAA+AGG | 0.531712 | 7_2:-67030797 | Msa1070720:CDS |
CTACTTCCTGGTTTCATGAA+CGG | 0.533523 | 7_2:-67031055 | Msa1070720:CDS |
TATATGTATCACCAAGGCTA+TGG | 0.535794 | 7_2:-67031789 | Msa1070720:CDS |
ATTAACAAGTATCTGATGCA+AGG | 0.536294 | 7_2:-67029088 | Msa1070720:three_prime_UTR |
GGTTTCAGTGAGCTAAATAA+GGG | 0.537128 | 7_2:-67030869 | Msa1070720:CDS |
TGATGACGAAGTAGTCCCTC+TGG | 0.538227 | 7_2:-67030753 | Msa1070720:CDS |
CGAGCCAAATGTTATATCAC+TGG | 0.539211 | 7_2:+67029559 | None:intergenic |
GCAAGGATACGTTCAGAGGA+AGG | 0.543049 | 7_2:+67033993 | None:intergenic |
AGATGCTGAGCCAGTGAAGA+AGG | 0.544090 | 7_2:-67033449 | Msa1070720:intron |
GTGATTGTACAAATCAAAAT+GGG | 0.544884 | 7_2:-67031518 | Msa1070720:CDS |
AAAACAGACTATCAGATTGA+GGG | 0.545055 | 7_2:+67029156 | None:intergenic |
TGGCAGCAGGATAGGTGGAC+TGG | 0.546329 | 7_2:-67030356 | Msa1070720:CDS |
AACTCTGTTAGCATGGTCAA+TGG | 0.546862 | 7_2:-67031540 | Msa1070720:CDS |
CTCCATAATAATATGTAGAA+GGG | 0.550357 | 7_2:+67032481 | None:intergenic |
GTTGGTTTAGCTGAGATGAC+TGG | 0.550580 | 7_2:-67030410 | Msa1070720:CDS |
CTATTTACAGGGTGTTTATG+GGG | 0.552329 | 7_2:-67031823 | Msa1070720:intron |
TAATTTAATAATATATAATG+TGG | 0.552660 | 7_2:-67029189 | Msa1070720:three_prime_UTR |
GGTGAAGCATAAGCTCCATA+TGG | 0.553790 | 7_2:+67031759 | None:intergenic |
CCTGACAATGGAGCACAAGC+TGG | 0.556300 | 7_2:+67031423 | None:intergenic |
CGTCATCACTCTTCACTGGA+AGG | 0.556648 | 7_2:+67030768 | None:intergenic |
GGTCCAAGGTTGAGTACTCA+TGG | 0.557426 | 7_2:-67031393 | Msa1070720:CDS |
TGCAGATGCAGCACAGGGGA+AGG | 0.560094 | 7_2:-67029486 | Msa1070720:CDS |
GAGGTCCTGTTAGAAAGGAA+TGG | 0.560680 | 7_2:-67029455 | Msa1070720:CDS |
CAGTGATATAACATTTGGCT+CGG | 0.560767 | 7_2:-67029558 | Msa1070720:CDS |
GATAACAAGTACAGAGCCAC+AGG | 0.561687 | 7_2:-67030932 | Msa1070720:CDS |
GATGCTGCATATCAGGAAGC+TGG | 0.562451 | 7_2:-67030578 | Msa1070720:CDS |
AGGAGCAACAGAAGGCATGA+TGG | 0.563308 | 7_2:+67034013 | None:intergenic |
TCAAAGATTTCTCATCTCAA+AGG | 0.563706 | 7_2:-67031275 | Msa1070720:CDS |
TCAGAACTCTTGGCAGCTCT+AGG | 0.565264 | 7_2:+67030845 | None:intergenic |
TAAAGGAAACTCTGTTAGCA+TGG | 0.566310 | 7_2:-67031547 | Msa1070720:CDS |
TCTGCAGGTTAAGTTTGAGA+AGG | 0.567461 | 7_2:-67030140 | Msa1070720:intron |
AAGCGTCAAAAGTCCTGGAC+CGG | 0.570008 | 7_2:-67030816 | Msa1070720:CDS |
GAATAACATACCATGAATTG+TGG | 0.570612 | 7_2:+67031228 | None:intergenic |
TTTAGCTGAGATGACTGGTC+CGG | 0.571001 | 7_2:-67030405 | Msa1070720:CDS |
TTCCAGACATCCATCTGGAA+TGG | 0.573479 | 7_2:-67031080 | Msa1070720:CDS |
ATTTCAGGTTATGACGGGCA+AGG | 0.573517 | 7_2:-67032305 | Msa1070720:intron |
TCTCCAATAGTTCAACATGA+TGG | 0.574558 | 7_2:-67031726 | Msa1070720:CDS |
AAACCAATGACACGTCTGTA+GGG | 0.574611 | 7_2:+67031355 | None:intergenic |
GTGAAAGAAGAATATAGAGA+GGG | 0.576792 | 7_2:+67034097 | None:intergenic |
AACATGATGGTCAGATGTAT+GGG | 0.580184 | 7_2:-67031713 | Msa1070720:CDS |
GCTCCATTGTCAGGATATCA+GGG | 0.580366 | 7_2:-67031414 | Msa1070720:CDS |
CCTTTGAGTAATAAAGTGAC+CGG | 0.584388 | 7_2:+67030797 | None:intergenic |
TTAACAAGTATCTGATGCAA+GGG | 0.584691 | 7_2:-67029087 | Msa1070720:three_prime_UTR |
TCGCAGCCCAAGACTATCGT+TGG | 0.584897 | 7_2:-67033472 | Msa1070720:CDS |
CCTTCTACATATTATTATGG+AGG | 0.590646 | 7_2:-67032480 | Msa1070720:intron |
TGTCAGGATATCAGGGTCCA+AGG | 0.592619 | 7_2:-67031407 | Msa1070720:CDS |
TAATCAACCTTGGTATGGAG+TGG | 0.595330 | 7_2:-67029245 | Msa1070720:three_prime_UTR |
AAGGTTGTAGCAAGAGACTT+GGG | 0.598797 | 7_2:+67029527 | None:intergenic |
GGAAGCAAGGATACGTTCAG+AGG | 0.598858 | 7_2:+67033989 | None:intergenic |
TCAGAGGAAGGAGCAACAGA+AGG | 0.599454 | 7_2:+67034005 | None:intergenic |
GTTCTTTATTCAGAACCAGA+GGG | 0.599531 | 7_2:+67030738 | None:intergenic |
ATGTTGAACTATTGGAGAGG+AGG | 0.600088 | 7_2:+67031731 | None:intergenic |
TTGCCAATGGTGCAGCTAAG+GGG | 0.600190 | 7_2:-67032551 | Msa1070720:CDS |
GCACCATGAGTACTCAACCT+TGG | 0.600384 | 7_2:+67031390 | None:intergenic |
CATACCATGAATTGTGGAAG+TGG | 0.601208 | 7_2:+67031234 | None:intergenic |
AGTATTGGCAGCAGGATAGG+TGG | 0.603280 | 7_2:-67030361 | Msa1070720:CDS |
TCCGTACAGGTCAACACTAG+CGG | 0.604969 | 7_2:-67030440 | Msa1070720:intron |
AGAAGAATCTTCAAATGCTG+GGG | 0.605229 | 7_2:+67029427 | None:intergenic |
GGAAGTAGTTCCATTCCAGA+TGG | 0.605311 | 7_2:+67031070 | None:intergenic |
GCTACTGCAGATGCAGCACA+GGG | 0.606043 | 7_2:-67029491 | Msa1070720:CDS |
TCGGATAGACAGTCCAAACA+TGG | 0.608453 | 7_2:-67031333 | Msa1070720:CDS |
TTGCTCAAAACAGGTCAACA+AGG | 0.609020 | 7_2:-67029582 | Msa1070720:intron |
ACAGTCCAAACATGGAGGAA+AGG | 0.610522 | 7_2:-67031325 | Msa1070720:CDS |
CTGGTTGCTTTAATGTGAAG+TGG | 0.611035 | 7_2:-67030337 | Msa1070720:CDS |
TGTTCTTTATTCAGAACCAG+AGG | 0.611819 | 7_2:+67030737 | None:intergenic |
AATTATGTGAACCTCGATGG+AGG | 0.612276 | 7_2:-67032263 | Msa1070720:CDS |
ATACAAGGGATTCTTATCAA+GGG | 0.612638 | 7_2:-67031455 | Msa1070720:CDS |
GAAACCAATGACACGTCTGT+AGG | 0.613907 | 7_2:+67031354 | None:intergenic |
ATTATGTGAACCTCGATGGA+GGG | 0.617318 | 7_2:-67032262 | Msa1070720:CDS |
CTGAATAAAGAACAATACAA+TGG | 0.618423 | 7_2:-67030728 | Msa1070720:CDS |
GCAGTTGACATTTCTCGTTG+TGG | 0.618461 | 7_2:+67031606 | None:intergenic |
TACATACCGTTCATGAAACC+AGG | 0.620415 | 7_2:+67031049 | None:intergenic |
GGACCCTGATATCCTGACAA+TGG | 0.621943 | 7_2:+67031411 | None:intergenic |
GATTCCAGAAGAAATGGGGA+TGG | 0.623548 | 7_2:-67030890 | Msa1070720:CDS |
CAAACCTGTAACTAATAGCA+GGG | 0.630259 | 7_2:-67030252 | Msa1070720:CDS |
TGTATTCAAAGATGTGTGCT+GGG | 0.631040 | 7_2:+67031473 | None:intergenic |
GGAGAGTTGTAATAAGAACA+GGG | 0.633150 | 7_2:+67031672 | None:intergenic |
AATGTCAACTGCTGTTAATG+CGG | 0.633445 | 7_2:-67031595 | Msa1070720:CDS |
CATCATCAAATCCTATAGCG+AGG | 0.642490 | 7_2:-67030666 | Msa1070720:CDS |
GCACACATCTTTGAATACAA+GGG | 0.645973 | 7_2:-67031469 | Msa1070720:CDS |
ATGGTGTGTAGCCATAGCCT+TGG | 0.646200 | 7_2:+67031778 | None:intergenic |
GTTTGGGCAAGCACTCCCAA+CGG | 0.651245 | 7_2:-67030614 | Msa1070720:CDS |
TGCTCTTATATGTATCACCA+AGG | 0.657123 | 7_2:-67031795 | Msa1070720:CDS |
GACGGGCAAGGAGATTGGAG+TGG | 0.657548 | 7_2:-67032293 | Msa1070720:CDS |
ACAGGGGAAGGTGAATTCAG+AGG | 0.661008 | 7_2:-67029474 | Msa1070720:CDS |
GCTGCATATCAGGAAGCTGG+TGG | 0.665240 | 7_2:-67030575 | Msa1070720:CDS |
ATCATGTTGAACTATTGGAG+AGG | 0.681216 | 7_2:+67031728 | None:intergenic |
TAATAGCAGGGATACTCAGG+AGG | 0.681467 | 7_2:-67030240 | Msa1070720:intron |
CTTGAGTCATCCCTCCATCG+AGG | 0.681479 | 7_2:+67032252 | None:intergenic |
GGTTGGATTATCTTCCCAAG+TGG | 0.681917 | 7_2:-67031304 | Msa1070720:CDS |
GTTAACTCCACTCCATACCA+AGG | 0.691738 | 7_2:+67029238 | None:intergenic |
TAACGATTCCAGAAGAAATG+GGG | 0.692399 | 7_2:-67030894 | Msa1070720:CDS |
AGCAACATAGCCATTACCTG+TGG | 0.696688 | 7_2:+67030916 | None:intergenic |
GATAGACAGTCCAAACATGG+AGG | 0.717397 | 7_2:-67031330 | Msa1070720:CDS |
TTTGCTCCGAACAAAACCAG+TGG | 0.723368 | 7_2:-67031630 | Msa1070720:CDS |
CTACTGCAGATGCAGCACAG+GGG | 0.780947 | 7_2:-67029490 | Msa1070720:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATATATTATTAAATTAA+AGG | + | chr7_2:67033948-67033967 | None:intergenic | 0.0% |
!! | AAAAAAAATGAAGAAAAAAT+TGG | + | chr7_2:67029416-67029435 | None:intergenic | 10.0% |
!!! | GTTTAAGTTTTTATTTTTTA+AGG | - | chr7_2:67030692-67030711 | Msa1070720:CDS | 10.0% |
!!! | TATTTTTCTCGATTTTTTTT+CGG | - | chr7_2:67029208-67029227 | Msa1070720:three_prime_UTR | 15.0% |
!!! | GGAAATTAAGTAAATTTTTT+AGG | - | chr7_2:67029230-67029249 | Msa1070720:three_prime_UTR | 15.0% |
!!! | AAAAAATACAATTTTTGCAT+TGG | - | chr7_2:67029882-67029901 | Msa1070720:intron | 15.0% |
!!! | AAAAATACAATTTTTGCATT+GGG | - | chr7_2:67029883-67029902 | Msa1070720:intron | 15.0% |
!! | ATAACAACAAAAAATCTTAA+GGG | + | chr7_2:67030292-67030311 | None:intergenic | 15.0% |
!! | AAGATTGTTGAATTAATATT+TGG | - | chr7_2:67030760-67030779 | Msa1070720:CDS | 15.0% |
!! | AGATTGTTGAATTAATATTT+GGG | - | chr7_2:67030761-67030780 | Msa1070720:CDS | 15.0% |
!! | ATGCATAAGTATAAAAAAAA+TGG | + | chr7_2:67030956-67030975 | None:intergenic | 15.0% |
!!! | AAAAGTTATATTTGAGTTTA+GGG | + | chr7_2:67032019-67032038 | None:intergenic | 15.0% |
!!! | AAAAAGTTATATTTGAGTTT+AGG | + | chr7_2:67032020-67032039 | None:intergenic | 15.0% |
!!! | TCCTATATTTTTGTTATTTT+CGG | - | chr7_2:67032589-67032608 | Msa1070720:intron | 15.0% |
!!! | ATTTTTCTCGATTTTTTTTC+GGG | - | chr7_2:67029209-67029228 | Msa1070720:three_prime_UTR | 20.0% |
!! | GAATTTGACTAATAACTATT+AGG | + | chr7_2:67029386-67029405 | None:intergenic | 20.0% |
!!! | TGAAGAAAAAATTGGTTTTT+GGG | + | chr7_2:67029408-67029427 | None:intergenic | 20.0% |
!!! | ATGAAGAAAAAATTGGTTTT+TGG | + | chr7_2:67029409-67029428 | None:intergenic | 20.0% |
!! | CTCATGTTAATACTAAAATA+TGG | - | chr7_2:67030021-67030040 | Msa1070720:CDS | 20.0% |
!! | CATAACAACAAAAAATCTTA+AGG | + | chr7_2:67030293-67030312 | None:intergenic | 20.0% |
!!! | ATTTTTAAAAATCAGGTATC+TGG | + | chr7_2:67030492-67030511 | None:intergenic | 20.0% |
!!! | AATCTTAGCATTTTTCTTTT+AGG | + | chr7_2:67030746-67030765 | None:intergenic | 20.0% |
!! | TTTGTTAGCTACAAAATTAA+AGG | - | chr7_2:67031020-67031039 | Msa1070720:CDS | 20.0% |
!! | GTTATATAATCCATTTAAGT+TGG | - | chr7_2:67031089-67031108 | Msa1070720:CDS | 20.0% |
!! | AAAGCATAAAATATAGTGTT+TGG | - | chr7_2:67032507-67032526 | Msa1070720:CDS | 20.0% |
!! | AAGCATAAAATATAGTGTTT+GGG | - | chr7_2:67032508-67032527 | Msa1070720:CDS | 20.0% |
!! | ACCGAAAATAACAAAAATAT+AGG | + | chr7_2:67032593-67032612 | None:intergenic | 20.0% |
!!! | TATATTTTTGTTATTTTCGG+TGG | - | chr7_2:67032592-67032611 | Msa1070720:intron | 20.0% |
!!! | ATATTTTTGTTATTTTCGGT+GGG | - | chr7_2:67032593-67032612 | Msa1070720:intron | 20.0% |
!! | TACTAAATGAAAACTGTATA+TGG | + | chr7_2:67032621-67032640 | None:intergenic | 20.0% |
!!! | AGTAAACTCATAGATTTTAT+TGG | - | chr7_2:67032637-67032656 | Msa1070720:intron | 20.0% |
!!! | TCAAATTGTCAAAATTTTCA+AGG | - | chr7_2:67033025-67033044 | Msa1070720:intron | 20.0% |
!!! | CTTGTTTTCTAAAATCAAAT+AGG | - | chr7_2:67033410-67033429 | Msa1070720:intron | 20.0% |
!! | TAAGAAAAAGAGAAAGCATA+TGG | + | chr7_2:67029190-67029209 | None:intergenic | 25.0% |
! | CATGTGTAATATCTTTCTTA+GGG | - | chr7_2:67029283-67029302 | Msa1070720:three_prime_UTR | 25.0% |
! | AAAACTTGATTACAAAGTGA+AGG | + | chr7_2:67029325-67029344 | None:intergenic | 25.0% |
!! | TTTTCACAAAAAGTCAAGTT+TGG | + | chr7_2:67029803-67029822 | None:intergenic | 25.0% |
!!! | TGTATTTTTTTCACTCTACA+TGG | + | chr7_2:67029872-67029891 | None:intergenic | 25.0% |
! | CTAAAACATCTTATCTTGAA+AGG | + | chr7_2:67029938-67029957 | None:intergenic | 25.0% |
!! | CTTTCAAGATAAGATGTTTT+AGG | - | chr7_2:67029936-67029955 | Msa1070720:intron | 25.0% |
! | TTTGTTTACATGAGCTATAT+TGG | + | chr7_2:67030149-67030168 | None:intergenic | 25.0% |
!! | AATAAGCTTTTTATCCAAAG+AGG | - | chr7_2:67030266-67030285 | Msa1070720:CDS | 25.0% |
!!! | TTTTTGTTGTTATGTTCGTT+TGG | - | chr7_2:67030299-67030318 | Msa1070720:CDS | 25.0% |
! | TACCCTTCTACATATTATTA+TGG | - | chr7_2:67030655-67030674 | Msa1070720:CDS | 25.0% |
! | CTCCATAATAATATGTAGAA+GGG | + | chr7_2:67030660-67030679 | None:intergenic | 25.0% |
! | TACATATTATTATGGAGGTA+AGG | - | chr7_2:67030663-67030682 | Msa1070720:CDS | 25.0% |
!!! | GCATTTTTCTTTTAGGTAAT+CGG | + | chr7_2:67030739-67030758 | None:intergenic | 25.0% |
! | TTGTTGAATTAATATTTGGG+CGG | - | chr7_2:67030764-67030783 | Msa1070720:CDS | 25.0% |
!!! | TGATTAATTTCAGGTTATGA+CGG | - | chr7_2:67030827-67030846 | Msa1070720:CDS | 25.0% |
!!! | CAACTCATTTTTGTTCTTTT+TGG | - | chr7_2:67031177-67031196 | Msa1070720:intron | 25.0% |
! | CCTTTATTCATAACATTTGA+AGG | + | chr7_2:67031577-67031596 | None:intergenic | 25.0% |
! | CCTTCAAATGTTATGAATAA+AGG | - | chr7_2:67031574-67031593 | Msa1070720:CDS | 25.0% |
! | GTGATTGTACAAATCAAAAT+GGG | - | chr7_2:67031620-67031639 | Msa1070720:CDS | 25.0% |
! | CTGAATAAAGAACAATACAA+TGG | - | chr7_2:67032410-67032429 | Msa1070720:intron | 25.0% |
! | TGTACGGAAAAAATTGAATT+AGG | + | chr7_2:67032686-67032705 | None:intergenic | 25.0% |
!!! | TAATTCAATTTTTTCCGTAC+AGG | - | chr7_2:67032685-67032704 | Msa1070720:intron | 25.0% |
!!! | ACAGTTTTATCAAAATCAAC+CGG | + | chr7_2:67032755-67032774 | None:intergenic | 25.0% |
! | TTGATAAAACTGTAGAGTAT+TGG | - | chr7_2:67032762-67032781 | Msa1070720:intron | 25.0% |
! | ATCATTAAGGATATTCCAAA+TGG | - | chr7_2:67032827-67032846 | Msa1070720:intron | 25.0% |
!! | ACAAGTATATTGGATGATTT+TGG | - | chr7_2:67033062-67033081 | Msa1070720:intron | 25.0% |
!! | CAAGTATATTGGATGATTTT+GGG | - | chr7_2:67033063-67033082 | Msa1070720:intron | 25.0% |
!! | TTTTAAGCAACTTGCAAAAA+GGG | + | chr7_2:67033466-67033485 | None:intergenic | 25.0% |
!! | ATTTTAAGCAACTTGCAAAA+AGG | + | chr7_2:67033467-67033486 | None:intergenic | 25.0% |
! | ATTATTGCTTCTTCAAACTA+AGG | - | chr7_2:67033485-67033504 | Msa1070720:CDS | 25.0% |
! | TTATTGCTTCTTCAAACTAA+GGG | - | chr7_2:67033486-67033505 | Msa1070720:CDS | 25.0% |
!! | TTATTTGCTGATATTTGTCT+TGG | - | chr7_2:67033763-67033782 | Msa1070720:intron | 25.0% |
!! | AATTTTTGCTTAATCAACCT+TGG | - | chr7_2:67033883-67033902 | Msa1070720:intron | 25.0% |
GTGAAAGAAGAATATAGAGA+GGG | + | chr7_2:67029044-67029063 | None:intergenic | 30.0% | |
AGTGAAAGAAGAATATAGAG+AGG | + | chr7_2:67029045-67029064 | None:intergenic | 30.0% | |
GCATGTGTAATATCTTTCTT+AGG | - | chr7_2:67029282-67029301 | Msa1070720:three_prime_UTR | 30.0% | |
GTTAAAATTACCTTCTTCAC+TGG | + | chr7_2:67029702-67029721 | None:intergenic | 30.0% | |
ATACTAAAATATGGCCTGTT+TGG | - | chr7_2:67030030-67030049 | Msa1070720:CDS | 30.0% | |
TCAAATAAGTCAATCCAAAC+AGG | + | chr7_2:67030047-67030066 | None:intergenic | 30.0% | |
TCATCTATTTGTATGCAGAA+TGG | - | chr7_2:67030556-67030575 | Msa1070720:CDS | 30.0% | |
CCTCCATAATAATATGTAGA+AGG | + | chr7_2:67030661-67030680 | None:intergenic | 30.0% | |
CCTTCTACATATTATTATGG+AGG | - | chr7_2:67030658-67030677 | Msa1070720:CDS | 30.0% | |
! | GCTTTTATTATTATCCGTTC+TGG | - | chr7_2:67030786-67030805 | Msa1070720:CDS | 30.0% |
!! | TTGGTGATGTGATTAATTTC+AGG | - | chr7_2:67030818-67030837 | Msa1070720:CDS | 30.0% |
!! | GATTAATTTCAGGTTATGAC+GGG | - | chr7_2:67030828-67030847 | Msa1070720:CDS | 30.0% |
AACTCTCAACATATACAACA+CGG | + | chr7_2:67031072-67031091 | None:intergenic | 30.0% | |
TAAATTCAAAACAGCTACAC+TGG | + | chr7_2:67031119-67031138 | None:intergenic | 30.0% | |
AAACACCCTGTAAATAGATT+CGG | + | chr7_2:67031312-67031331 | None:intergenic | 30.0% | |
! | ATCTATTTACAGGGTGTTTA+TGG | - | chr7_2:67031313-67031332 | Msa1070720:CDS | 30.0% |
! | TCTATTTACAGGGTGTTTAT+GGG | - | chr7_2:67031314-67031333 | Msa1070720:CDS | 30.0% |
GGTGATTGTACAAATCAAAA+TGG | - | chr7_2:67031619-67031638 | Msa1070720:CDS | 30.0% | |
!! | TACAAATCAAAATGGGTTGA+AGG | - | chr7_2:67031627-67031646 | Msa1070720:CDS | 30.0% |
AATACAAGGGATTCTTATCA+AGG | - | chr7_2:67031682-67031701 | Msa1070720:CDS | 30.0% | |
ATACAAGGGATTCTTATCAA+GGG | - | chr7_2:67031683-67031702 | Msa1070720:CDS | 30.0% | |
! | ATCTTTGATATTTGCCACTT+GGG | + | chr7_2:67031851-67031870 | None:intergenic | 30.0% |
AATCTTTGATATTTGCCACT+TGG | + | chr7_2:67031852-67031871 | None:intergenic | 30.0% | |
TCAAAGATTTCTCATCTCAA+AGG | - | chr7_2:67031863-67031882 | Msa1070720:intron | 30.0% | |
GAATAACATACCATGAATTG+TGG | + | chr7_2:67031913-67031932 | None:intergenic | 30.0% | |
! | TTTTTGTTGCAGAACTTGAA+TGG | - | chr7_2:67032035-67032054 | Msa1070720:intron | 30.0% |
! | AACAATTTGTTCAGCCAATA+TGG | - | chr7_2:67032119-67032138 | Msa1070720:intron | 30.0% |
! | GCTTTTATTATCAGAACTCT+TGG | + | chr7_2:67032306-67032325 | None:intergenic | 30.0% |
! | GATGATGAAAAATTTTGCGT+CGG | + | chr7_2:67032459-67032478 | None:intergenic | 30.0% |
ATATTCCAAATGGTGTGTTA+AGG | - | chr7_2:67032837-67032856 | Msa1070720:intron | 30.0% | |
ACATAAGCATCTAGTTGAAA+GGG | + | chr7_2:67032969-67032988 | None:intergenic | 30.0% | |
TACATAAGCATCTAGTTGAA+AGG | + | chr7_2:67032970-67032989 | None:intergenic | 30.0% | |
TTATGTATATGTCATTCTGC+AGG | - | chr7_2:67032983-67033002 | Msa1070720:intron | 30.0% | |
TGCAAGCAAAACAAGTATAT+TGG | - | chr7_2:67033052-67033071 | Msa1070720:intron | 30.0% | |
ATCTTTGACAAAAGAAACAG+TGG | + | chr7_2:67033306-67033325 | None:intergenic | 30.0% | |
! | CTTTTGTCAAAGATATTTGC+TGG | - | chr7_2:67033312-67033331 | Msa1070720:intron | 30.0% |
GTACAAATCAAGGTAAAACA+AGG | - | chr7_2:67033348-67033367 | Msa1070720:intron | 30.0% | |
TAAATTTCCTTGCTCAAAAC+AGG | - | chr7_2:67033547-67033566 | Msa1070720:intron | 30.0% | |
TAGAAGAATCTTCAAATGCT+GGG | + | chr7_2:67033715-67033734 | None:intergenic | 30.0% | |
TTAGAAGAATCTTCAAATGC+TGG | + | chr7_2:67033716-67033735 | None:intergenic | 30.0% | |
AAAACAGACTATCAGATTGA+GGG | + | chr7_2:67033985-67034004 | None:intergenic | 30.0% | |
TAAAACAGACTATCAGATTG+AGG | + | chr7_2:67033986-67034005 | None:intergenic | 30.0% | |
ATTAACAAGTATCTGATGCA+AGG | - | chr7_2:67034050-67034069 | Msa1070720:five_prime_UTR | 30.0% | |
TTAACAAGTATCTGATGCAA+GGG | - | chr7_2:67034051-67034070 | Msa1070720:five_prime_UTR | 30.0% | |
TTTACTGCAGAATTTGTCTC+TGG | - | chr7_2:67029641-67029660 | Msa1070720:intron | 35.0% | |
AAACATGAGCAGCATCAATA+AGG | + | chr7_2:67029724-67029743 | None:intergenic | 35.0% | |
!!! | TGCTGCTCATGTTTTTAAGT+TGG | - | chr7_2:67029730-67029749 | Msa1070720:intron | 35.0% |
! | TTTTTCACTCTACATGGCTT+TGG | + | chr7_2:67029866-67029885 | None:intergenic | 35.0% |
TGATTACACAACAGTAATCG+TGG | + | chr7_2:67029973-67029992 | None:intergenic | 35.0% | |
!! | ATAAGTTTTGTGAGCCTGTT+TGG | - | chr7_2:67030081-67030100 | Msa1070720:CDS | 35.0% |
!! | TAAGTTTTGTGAGCCTGTTT+GGG | - | chr7_2:67030082-67030101 | Msa1070720:CDS | 35.0% |
TTACATAACTTCTCCCAAAC+AGG | + | chr7_2:67030098-67030117 | None:intergenic | 35.0% | |
AAAAATCTTAAGGGCCTCTT+TGG | + | chr7_2:67030283-67030302 | None:intergenic | 35.0% | |
! | TTGTTGTTATGTTCGTTTGG+TGG | - | chr7_2:67030302-67030321 | Msa1070720:CDS | 35.0% |
TAGCTTGGATTTGGATTGAA+TGG | + | chr7_2:67030622-67030641 | None:intergenic | 35.0% | |
! | TTTGGAACATAGCTTGGATT+TGG | + | chr7_2:67030631-67030650 | None:intergenic | 35.0% |
AATCCAAGCTATGTTCCAAA+TGG | - | chr7_2:67030631-67030650 | Msa1070720:CDS | 35.0% | |
! | TATCCATTTGGAACATAGCT+TGG | + | chr7_2:67030637-67030656 | None:intergenic | 35.0% |
!! | TATGTAGAAGGGTATCCATT+TGG | + | chr7_2:67030649-67030668 | None:intergenic | 35.0% |
!!! | ACCAAGTCATTTTTCCAGAA+CGG | + | chr7_2:67030803-67030822 | None:intergenic | 35.0% |
CAAGTAAGTACCTTAATCTC+TGG | - | chr7_2:67030905-67030924 | Msa1070720:CDS | 35.0% | |
GCATACATTCATCACAGATA+CGG | + | chr7_2:67030934-67030953 | None:intergenic | 35.0% | |
AGAAAGTAGTCACCATCAAA+TGG | + | chr7_2:67030996-67031015 | None:intergenic | 35.0% | |
!! | TTTGGTGTTTCTGTTCTACT+AGG | - | chr7_2:67031195-67031214 | Msa1070720:intron | 35.0% |
AGCATTTATCAAGTGGTTAG+AGG | + | chr7_2:67031282-67031301 | None:intergenic | 35.0% | |
!! | CAGGAAAAGCATTTATCAAG+TGG | + | chr7_2:67031289-67031308 | None:intergenic | 35.0% |
! | CTATTTACAGGGTGTTTATG+GGG | - | chr7_2:67031315-67031334 | Msa1070720:CDS | 35.0% |
TGCTCTTATATGTATCACCA+AGG | - | chr7_2:67031343-67031362 | Msa1070720:CDS | 35.0% | |
TATATGTATCACCAAGGCTA+TGG | - | chr7_2:67031349-67031368 | Msa1070720:CDS | 35.0% | |
ATCATGTTGAACTATTGGAG+AGG | + | chr7_2:67031413-67031432 | None:intergenic | 35.0% | |
TCTCCAATAGTTCAACATGA+TGG | - | chr7_2:67031412-67031431 | Msa1070720:CDS | 35.0% | |
TGACCATCATGTTGAACTAT+TGG | + | chr7_2:67031418-67031437 | None:intergenic | 35.0% | |
AACATGATGGTCAGATGTAT+GGG | - | chr7_2:67031425-67031444 | Msa1070720:CDS | 35.0% | |
GGAGAGTTGTAATAAGAACA+GGG | + | chr7_2:67031469-67031488 | None:intergenic | 35.0% | |
TGGAGAGTTGTAATAAGAAC+AGG | + | chr7_2:67031470-67031489 | None:intergenic | 35.0% | |
AATGTCAACTGCTGTTAATG+CGG | - | chr7_2:67031543-67031562 | Msa1070720:CDS | 35.0% | |
TAAAGGAAACTCTGTTAGCA+TGG | - | chr7_2:67031591-67031610 | Msa1070720:CDS | 35.0% | |
TGTATTCAAAGATGTGTGCT+GGG | + | chr7_2:67031668-67031687 | None:intergenic | 35.0% | |
TTGTATTCAAAGATGTGTGC+TGG | + | chr7_2:67031669-67031688 | None:intergenic | 35.0% | |
AGCACACATCTTTGAATACA+AGG | - | chr7_2:67031668-67031687 | Msa1070720:CDS | 35.0% | |
GCACACATCTTTGAATACAA+GGG | - | chr7_2:67031669-67031688 | Msa1070720:CDS | 35.0% | |
TTCAGAGCTAATTCTCGTTA+TGG | - | chr7_2:67032149-67032168 | Msa1070720:intron | 35.0% | |
TCAGAGCTAATTCTCGTTAT+GGG | - | chr7_2:67032150-67032169 | Msa1070720:intron | 35.0% | |
CTAACGATTCCAGAAGAAAT+GGG | - | chr7_2:67032243-67032262 | Msa1070720:intron | 35.0% | |
TAACGATTCCAGAAGAAATG+GGG | - | chr7_2:67032244-67032263 | Msa1070720:intron | 35.0% | |
TGGTTTCAGTGAGCTAAATA+AGG | - | chr7_2:67032268-67032287 | Msa1070720:CDS | 35.0% | |
GGTTTCAGTGAGCTAAATAA+GGG | - | chr7_2:67032269-67032288 | Msa1070720:CDS | 35.0% | |
!! | AATAAAAGCGTCAAAAGTCC+TGG | - | chr7_2:67032317-67032336 | Msa1070720:intron | 35.0% |
CCTTTGAGTAATAAAGTGAC+CGG | + | chr7_2:67032344-67032363 | None:intergenic | 35.0% | |
! | CGGTCACTTTATTACTCAAA+GGG | - | chr7_2:67032342-67032361 | Msa1070720:intron | 35.0% |
GTTCTTTATTCAGAACCAGA+GGG | + | chr7_2:67032403-67032422 | None:intergenic | 35.0% | |
TGTTCTTTATTCAGAACCAG+AGG | + | chr7_2:67032404-67032423 | None:intergenic | 35.0% | |
TGTGAAGTGGCATATCATTA+AGG | - | chr7_2:67032814-67032833 | Msa1070720:intron | 35.0% | |
ACAAACCTGTAACTAATAGC+AGG | - | chr7_2:67032885-67032904 | Msa1070720:intron | 35.0% | |
CAAACCTGTAACTAATAGCA+GGG | - | chr7_2:67032886-67032905 | Msa1070720:intron | 35.0% | |
! | CTTAAATTTTCTCTCCTGAG+TGG | + | chr7_2:67033111-67033130 | None:intergenic | 35.0% |
CACTCAGGAGAGAAAATTTA+AGG | - | chr7_2:67033109-67033128 | Msa1070720:intron | 35.0% | |
! | AAGACAACTGTTACCTGTTT+TGG | + | chr7_2:67033146-67033165 | None:intergenic | 35.0% |
CAAAACAAAGCAAACTAAGC+AGG | + | chr7_2:67033191-67033210 | None:intergenic | 35.0% | |
!!! | CTGCTTAGTTTGCTTTGTTT+TGG | - | chr7_2:67033189-67033208 | Msa1070720:intron | 35.0% |
CTGTTGTTGTGTACAAATCA+AGG | - | chr7_2:67033338-67033357 | Msa1070720:intron | 35.0% | |
AAGGCCAGTGATATAACATT+TGG | - | chr7_2:67033575-67033594 | Msa1070720:intron | 35.0% | |
CAGTGATATAACATTTGGCT+CGG | - | chr7_2:67033580-67033599 | Msa1070720:intron | 35.0% | |
! | AGTAGCTGATTCTTTCATCA+AGG | + | chr7_2:67033633-67033652 | None:intergenic | 35.0% |
TTGATCCATTCCTTTCTAAC+AGG | + | chr7_2:67033691-67033710 | None:intergenic | 35.0% | |
AGAAGAATCTTCAAATGCTG+GGG | + | chr7_2:67033714-67033733 | None:intergenic | 35.0% | |
!!! | GTGCTTTGTTCTTTGTTTTC+TGG | - | chr7_2:67033799-67033818 | Msa1070720:intron | 35.0% |
TTGCTTAATCAACCTTGGTA+TGG | - | chr7_2:67033888-67033907 | Msa1070720:intron | 35.0% | |
AAACCCAAACTTCACGTTCT+TGG | - | chr7_2:67029078-67029097 | Msa1070720:three_prime_UTR | 40.0% | |
ATATGGAGAAAGTGGAAGAG+GGG | + | chr7_2:67029173-67029192 | None:intergenic | 40.0% | |
CATATGGAGAAAGTGGAAGA+GGG | + | chr7_2:67029174-67029193 | None:intergenic | 40.0% | |
! | GAGAAAGCATATGGAGAAAG+TGG | + | chr7_2:67029181-67029200 | None:intergenic | 40.0% |
TTGTTGTGCTGTGTAAGCAT+AGG | - | chr7_2:67029472-67029491 | Msa1070720:CDS | 40.0% | |
CTTCTATAGTAGCTAGGTCA+AGG | + | chr7_2:67029614-67029633 | None:intergenic | 40.0% | |
TTGCAGCTTCTATAGTAGCT+AGG | + | chr7_2:67029620-67029639 | None:intergenic | 40.0% | |
!!! | GCTCATGTTTTTAAGTTGGC+TGG | - | chr7_2:67029734-67029753 | Msa1070720:intron | 40.0% |
!!! | TGTTTTTAAGTTGGCTGGCA+TGG | - | chr7_2:67029739-67029758 | Msa1070720:intron | 40.0% |
! | CATGGTCTTGAAACGTGTTT+AGG | - | chr7_2:67029757-67029776 | Msa1070720:intron | 40.0% |
! | GTTTAGGCATGCCTCTTTTA+AGG | - | chr7_2:67029773-67029792 | Msa1070720:intron | 40.0% |
! | AGTTTGGTGAGCCTTAAAAG+AGG | + | chr7_2:67029787-67029806 | None:intergenic | 40.0% |
!!! | TCTACATGGCTTTGGCTTTT+AGG | + | chr7_2:67029858-67029877 | None:intergenic | 40.0% |
CAGGCTCACAAAACTTATGT+CGG | + | chr7_2:67030079-67030098 | None:intergenic | 40.0% | |
AGCCTTACTCTGCCTTTAAT+CGG | - | chr7_2:67030413-67030432 | Msa1070720:CDS | 40.0% | |
!!! | AATGGACCTGTTTTTGCCAA+TGG | - | chr7_2:67030574-67030593 | Msa1070720:CDS | 40.0% |
!! | TCCGTTCTGGAAAAATGACT+TGG | - | chr7_2:67030799-67030818 | Msa1070720:CDS | 40.0% |
TCCAATTATGTGAACCTCGA+TGG | - | chr7_2:67030872-67030891 | Msa1070720:CDS | 40.0% | |
TCCATCGAGGTTCACATAAT+TGG | + | chr7_2:67030876-67030895 | None:intergenic | 40.0% | |
AATTATGTGAACCTCGATGG+AGG | - | chr7_2:67030875-67030894 | Msa1070720:CDS | 40.0% | |
ATTATGTGAACCTCGATGGA+GGG | - | chr7_2:67030876-67030895 | Msa1070720:CDS | 40.0% | |
GATACGGAAACCAGAGATTA+AGG | + | chr7_2:67030918-67030937 | None:intergenic | 40.0% | |
GTCACCATCAAATGGTTCTT+CGG | + | chr7_2:67030988-67031007 | None:intergenic | 40.0% | |
! | CACTGGTCTACCAACTTAAA+TGG | + | chr7_2:67031102-67031121 | None:intergenic | 40.0% |
TTCCTGCCGAATCTATTTAC+AGG | - | chr7_2:67031303-67031322 | Msa1070720:CDS | 40.0% | |
TCCTGCCGAATCTATTTACA+GGG | - | chr7_2:67031304-67031323 | Msa1070720:CDS | 40.0% | |
ACTATTGGAGAGGAGGAATT+TGG | + | chr7_2:67031403-67031422 | None:intergenic | 40.0% | |
ATGTTGAACTATTGGAGAGG+AGG | + | chr7_2:67031410-67031429 | None:intergenic | 40.0% | |
CAACATGATGGTCAGATGTA+TGG | - | chr7_2:67031424-67031443 | Msa1070720:CDS | 40.0% | |
AATGATCCATCAGCAGAAGT+TGG | + | chr7_2:67031490-67031509 | None:intergenic | 40.0% | |
AACTCTGTTAGCATGGTCAA+TGG | - | chr7_2:67031598-67031617 | Msa1070720:CDS | 40.0% | |
AAACCAATGACACGTCTGTA+GGG | + | chr7_2:67031786-67031805 | None:intergenic | 40.0% | |
!! | TACAGACGTGTCATTGGTTT+CGG | - | chr7_2:67031786-67031805 | Msa1070720:CDS | 40.0% |
CATACCATGAATTGTGGAAG+TGG | + | chr7_2:67031907-67031926 | None:intergenic | 40.0% | |
CTACTTCCTGGTTTCATGAA+CGG | - | chr7_2:67032083-67032102 | Msa1070720:intron | 40.0% | |
TACATACCGTTCATGAAACC+AGG | + | chr7_2:67032092-67032111 | None:intergenic | 40.0% | |
TGGCTGAACAAATTGTTGCT+TGG | + | chr7_2:67032116-67032135 | None:intergenic | 40.0% | |
CTCTGAATGTGCTTCCATAT+TGG | + | chr7_2:67032136-67032155 | None:intergenic | 40.0% | |
GCTAACGATTCCAGAAGAAA+TGG | - | chr7_2:67032242-67032261 | Msa1070720:intron | 40.0% | |
! | CCGGTCACTTTATTACTCAA+AGG | - | chr7_2:67032341-67032360 | Msa1070720:intron | 40.0% |
CATCATCAAATCCTATAGCG+AGG | - | chr7_2:67032472-67032491 | Msa1070720:intron | 40.0% | |
AACACTAGCGGTCAATTTGT+TGG | - | chr7_2:67032710-67032729 | Msa1070720:intron | 40.0% | |
! | CTGGTTGCTTTAATGTGAAG+TGG | - | chr7_2:67032801-67032820 | Msa1070720:intron | 40.0% |
ATGTGCCTTAACACACCATT+TGG | + | chr7_2:67032845-67032864 | None:intergenic | 40.0% | |
GTATCCCTGCTATTAGTTAC+AGG | + | chr7_2:67032893-67032912 | None:intergenic | 40.0% | |
AACTAATAGCAGGGATACTC+AGG | - | chr7_2:67032895-67032914 | Msa1070720:intron | 40.0% | |
TCTGCAGGTTAAGTTTGAGA+AGG | - | chr7_2:67032998-67033017 | Msa1070720:intron | 40.0% | |
CTGCAGGTTAAGTTTGAGAA+GGG | - | chr7_2:67032999-67033018 | Msa1070720:intron | 40.0% | |
GTTGAAATGTAAGAGCTGTG+TGG | - | chr7_2:67033213-67033232 | Msa1070720:intron | 40.0% | |
ATGTAAGAGCTGTGTGGTAT+TGG | - | chr7_2:67033219-67033238 | Msa1070720:intron | 40.0% | |
!! | TTGTTGACCTGTTTTGAGCA+AGG | + | chr7_2:67033557-67033576 | None:intergenic | 40.0% |
TTGCTCAAAACAGGTCAACA+AGG | - | chr7_2:67033556-67033575 | Msa1070720:intron | 40.0% | |
CGAGCCAAATGTTATATCAC+TGG | + | chr7_2:67033582-67033601 | None:intergenic | 40.0% | |
AAGGTTGTAGCAAGAGACTT+GGG | + | chr7_2:67033614-67033633 | None:intergenic | 40.0% | |
ATTCAGAGGTCCTGTTAGAA+AGG | - | chr7_2:67033678-67033697 | Msa1070720:intron | 40.0% | |
TCTTCTCAGTGCTTTAGTCA+TGG | - | chr7_2:67033834-67033853 | Msa1070720:intron | 40.0% | |
TAATCAACCTTGGTATGGAG+TGG | - | chr7_2:67033893-67033912 | Msa1070720:intron | 40.0% | |
GCATATGGAGAAAGTGGAAG+AGG | + | chr7_2:67029175-67029194 | None:intergenic | 45.0% | |
GCATCTCCAACGATAGTCTT+GGG | + | chr7_2:67029675-67029694 | None:intergenic | 45.0% | |
AGCATCTCCAACGATAGTCT+TGG | + | chr7_2:67029676-67029695 | None:intergenic | 45.0% | |
CATTGGGAGGATTCAAACCT+GGG | + | chr7_2:67030366-67030385 | None:intergenic | 45.0% | |
!!! | CTCCCAATGCCACTTTTTGT+GGG | - | chr7_2:67030377-67030396 | Msa1070720:CDS | 45.0% |
AGCCCACAAAAAGTGGCATT+GGG | + | chr7_2:67030382-67030401 | None:intergenic | 45.0% | |
TAGCCCACAAAAAGTGGCAT+TGG | + | chr7_2:67030383-67030402 | None:intergenic | 45.0% | |
!! | ATGGACTAGCCCACAAAAAG+TGG | + | chr7_2:67030389-67030408 | None:intergenic | 45.0% |
GTCCGATTAAAGGCAGAGTA+AGG | + | chr7_2:67030418-67030437 | None:intergenic | 45.0% | |
! | TTTTGCCAATGGTGCAGCTA+AGG | - | chr7_2:67030585-67030604 | Msa1070720:CDS | 45.0% |
TTTGCCAATGGTGCAGCTAA+GGG | - | chr7_2:67030586-67030605 | Msa1070720:CDS | 45.0% | |
!! | ATTTCAGGTTATGACGGGCA+AGG | - | chr7_2:67030833-67030852 | Msa1070720:CDS | 45.0% |
TCTGCCGAAGAACCATTTGA+TGG | - | chr7_2:67030981-67031000 | Msa1070720:CDS | 45.0% | |
ACCCTGTAAATAGATTCGGC+AGG | + | chr7_2:67031308-67031327 | None:intergenic | 45.0% | |
GGTGAAGCATAAGCTCCATA+TGG | + | chr7_2:67031382-67031401 | None:intergenic | 45.0% | |
AACTCTCCAACTTCTGCTGA+TGG | - | chr7_2:67031481-67031500 | Msa1070720:CDS | 45.0% | |
TTTGCTCCGAACAAAACCAG+TGG | - | chr7_2:67031508-67031527 | Msa1070720:CDS | 45.0% | |
!!! | TGTGGACCACTGGTTTTGTT+CGG | + | chr7_2:67031517-67031536 | None:intergenic | 45.0% |
GCAGTTGACATTTCTCGTTG+TGG | + | chr7_2:67031535-67031554 | None:intergenic | 45.0% | |
TGCTCCATTGTCAGGATATC+AGG | - | chr7_2:67031723-67031742 | Msa1070720:CDS | 45.0% | |
GCTCCATTGTCAGGATATCA+GGG | - | chr7_2:67031724-67031743 | Msa1070720:CDS | 45.0% | |
AATCCCTACAGACGTGTCAT+TGG | - | chr7_2:67031780-67031799 | Msa1070720:CDS | 45.0% | |
GAAACCAATGACACGTCTGT+AGG | + | chr7_2:67031787-67031806 | None:intergenic | 45.0% | |
TCGGATAGACAGTCCAAACA+TGG | - | chr7_2:67031805-67031824 | Msa1070720:CDS | 45.0% | |
GATAGACAGTCCAAACATGG+AGG | - | chr7_2:67031808-67031827 | Msa1070720:CDS | 45.0% | |
ACAGTCCAAACATGGAGGAA+AGG | - | chr7_2:67031813-67031832 | Msa1070720:CDS | 45.0% | |
TCCAAACATGGAGGAAAGGT+TGG | - | chr7_2:67031817-67031836 | Msa1070720:intron | 45.0% | |
TCCAACCTTTCCTCCATGTT+TGG | + | chr7_2:67031821-67031840 | None:intergenic | 45.0% | |
GGTTGGATTATCTTCCCAAG+TGG | - | chr7_2:67031834-67031853 | Msa1070720:intron | 45.0% | |
TCAGCCACTTCCACAATTCA+TGG | - | chr7_2:67031900-67031919 | Msa1070720:intron | 45.0% | |
GCACAGTTGCACTTCGAAAA+AGG | + | chr7_2:67031942-67031961 | None:intergenic | 45.0% | |
AATGGTTCCAGACATCCATC+TGG | - | chr7_2:67032053-67032072 | Msa1070720:intron | 45.0% | |
TTCCAGACATCCATCTGGAA+TGG | - | chr7_2:67032058-67032077 | Msa1070720:intron | 45.0% | |
TTCCATTCCAGATGGATGTC+TGG | + | chr7_2:67032063-67032082 | None:intergenic | 45.0% | |
GGAAGTAGTTCCATTCCAGA+TGG | + | chr7_2:67032071-67032090 | None:intergenic | 45.0% | |
! | TCTGGAATGGAACTACTTCC+TGG | - | chr7_2:67032071-67032090 | Msa1070720:intron | 45.0% |
CGTTATGGGTCTTCTGCATA+CGG | - | chr7_2:67032164-67032183 | Msa1070720:intron | 45.0% | |
! | TCTGCATACGGATCTAGAAC+AGG | - | chr7_2:67032176-67032195 | Msa1070720:intron | 45.0% |
GATAACAAGTACAGAGCCAC+AGG | - | chr7_2:67032206-67032225 | Msa1070720:intron | 45.0% | |
AAGTACAGAGCCACAGGTAA+TGG | - | chr7_2:67032212-67032231 | Msa1070720:intron | 45.0% | |
AGCAACATAGCCATTACCTG+TGG | + | chr7_2:67032225-67032244 | None:intergenic | 45.0% | |
GATTCCAGAAGAAATGGGGA+TGG | - | chr7_2:67032248-67032267 | Msa1070720:intron | 45.0% | |
GAAACCATCCCCATTTCTTC+TGG | + | chr7_2:67032255-67032274 | None:intergenic | 45.0% | |
AGTAATAAAGTGACCGGTCC+AGG | + | chr7_2:67032338-67032357 | None:intergenic | 45.0% | |
ACTTCGTCATCACTCTTCAC+TGG | + | chr7_2:67032377-67032396 | None:intergenic | 45.0% | |
ATGAACATCGTCCTCGCTAT+AGG | + | chr7_2:67032486-67032505 | None:intergenic | 45.0% | |
! | TCCAGCTTTTTGTTGCCGTT+GGG | + | chr7_2:67032542-67032561 | None:intergenic | 45.0% |
! | ATCCAGCTTTTTGTTGCCGT+TGG | + | chr7_2:67032543-67032562 | None:intergenic | 45.0% |
AAAGCTGGATGCTGCATATC+AGG | - | chr7_2:67032553-67032572 | Msa1070720:CDS | 45.0% | |
! | GTTGGTTTAGCTGAGATGAC+TGG | - | chr7_2:67032728-67032747 | Msa1070720:intron | 45.0% |
! | TTTAGCTGAGATGACTGGTC+CGG | - | chr7_2:67032733-67032752 | Msa1070720:intron | 45.0% |
!! | AACTGTAGAGTATTGGCAGC+AGG | - | chr7_2:67032769-67032788 | Msa1070720:intron | 45.0% |
!! | TAGAGTATTGGCAGCAGGAT+AGG | - | chr7_2:67032774-67032793 | Msa1070720:intron | 45.0% |
TAATAGCAGGGATACTCAGG+AGG | - | chr7_2:67032898-67032917 | Msa1070720:intron | 45.0% | |
CAAGGTTGTAGCAAGAGACT+TGG | + | chr7_2:67033615-67033634 | None:intergenic | 45.0% | |
GAGGTCCTGTTAGAAAGGAA+TGG | - | chr7_2:67033683-67033702 | Msa1070720:intron | 45.0% | |
GTTAACTCCACTCCATACCA+AGG | + | chr7_2:67033903-67033922 | None:intergenic | 45.0% | |
!!! | TTTTTTTATTTTTAAAAATC+AGG | + | chr7_2:67030499-67030518 | None:intergenic | 5.0% |
!!! | GATTTTTAAAAATAAAAAAA+AGG | - | chr7_2:67030499-67030518 | Msa1070720:intron | 5.0% |
!! | TAATTTAATAATATATAATG+TGG | - | chr7_2:67033949-67033968 | Msa1070720:intron | 5.0% |
CCGCCAAGAACGTGAAGTTT+GGG | + | chr7_2:67029084-67029103 | None:intergenic | 50.0% | |
CCCAAACTTCACGTTCTTGG+CGG | - | chr7_2:67029081-67029100 | Msa1070720:three_prime_UTR | 50.0% | |
! | AGGAGCAACAGAAGGCATGA+TGG | + | chr7_2:67029128-67029147 | None:intergenic | 50.0% |
TCAGAGGAAGGAGCAACAGA+AGG | + | chr7_2:67029136-67029155 | None:intergenic | 50.0% | |
GCAAGGATACGTTCAGAGGA+AGG | + | chr7_2:67029148-67029167 | None:intergenic | 50.0% | |
GGAAGCAAGGATACGTTCAG+AGG | + | chr7_2:67029152-67029171 | None:intergenic | 50.0% | |
AAAGTGGAAGAGGGGAAGCA+AGG | + | chr7_2:67029165-67029184 | None:intergenic | 50.0% | |
AGATGCTGAGCCAGTGAAGA+AGG | - | chr7_2:67029689-67029708 | Msa1070720:intron | 50.0% | |
TTCAAACCTGGGACCTTGAG+AGG | + | chr7_2:67030355-67030374 | None:intergenic | 50.0% | |
GCATTGGGAGGATTCAAACC+TGG | + | chr7_2:67030367-67030386 | None:intergenic | 50.0% | |
! | CCACAAAAAGTGGCATTGGG+AGG | + | chr7_2:67030379-67030398 | None:intergenic | 50.0% |
!!! | CCTCCCAATGCCACTTTTTG+TGG | - | chr7_2:67030376-67030395 | Msa1070720:CDS | 50.0% |
AGGCAGAGTAAGGCTCTCAA+TGG | + | chr7_2:67030408-67030427 | None:intergenic | 50.0% | |
GATTGATCCCCCAGATTGGT+CGG | - | chr7_2:67030458-67030477 | Msa1070720:intron | 50.0% | |
TCCAATGACCGACCAATCTG+GGG | + | chr7_2:67030469-67030488 | None:intergenic | 50.0% | |
GTCCAATGACCGACCAATCT+GGG | + | chr7_2:67030470-67030489 | None:intergenic | 50.0% | |
GCTGCACCATTGGCAAAAAC+AGG | + | chr7_2:67030583-67030602 | None:intergenic | 50.0% | |
TTGCCAATGGTGCAGCTAAG+GGG | - | chr7_2:67030587-67030606 | Msa1070720:CDS | 50.0% | |
!! | GTTATGACGGGCAAGGAGAT+TGG | - | chr7_2:67030840-67030859 | Msa1070720:CDS | 50.0% |
ATGGTGTGTAGCCATAGCCT+TGG | + | chr7_2:67031363-67031382 | None:intergenic | 50.0% | |
GGCTATGGCTACACACCATA+TGG | - | chr7_2:67031364-67031383 | Msa1070720:CDS | 50.0% | |
CATTTCTCGTTGTGGACCAC+TGG | + | chr7_2:67031527-67031546 | None:intergenic | 50.0% | |
GGACCCTGATATCCTGACAA+TGG | + | chr7_2:67031730-67031749 | None:intergenic | 50.0% | |
TGTCAGGATATCAGGGTCCA+AGG | - | chr7_2:67031731-67031750 | Msa1070720:CDS | 50.0% | |
GGTCCAAGGTTGAGTACTCA+TGG | - | chr7_2:67031745-67031764 | Msa1070720:CDS | 50.0% | |
GCACCATGAGTACTCAACCT+TGG | + | chr7_2:67031751-67031770 | None:intergenic | 50.0% | |
TCAGAACTCTTGGCAGCTCT+AGG | + | chr7_2:67032296-67032315 | None:intergenic | 50.0% | |
AAGCGTCAAAAGTCCTGGAC+CGG | - | chr7_2:67032322-67032341 | Msa1070720:intron | 50.0% | |
CGTCATCACTCTTCACTGGA+AGG | + | chr7_2:67032373-67032392 | None:intergenic | 50.0% | |
! | TGATGACGAAGTAGTCCCTC+TGG | - | chr7_2:67032385-67032404 | Msa1070720:intron | 50.0% |
TCCCAACGGCAACAAAAAGC+TGG | - | chr7_2:67032538-67032557 | Msa1070720:CDS | 50.0% | |
GATGCTGCATATCAGGAAGC+TGG | - | chr7_2:67032560-67032579 | Msa1070720:CDS | 50.0% | |
TCCGTACAGGTCAACACTAG+CGG | - | chr7_2:67032698-67032717 | Msa1070720:intron | 50.0% | |
!! | ACCGCTAGTGTTGACCTGTA+CGG | + | chr7_2:67032702-67032721 | None:intergenic | 50.0% |
!! | AGTATTGGCAGCAGGATAGG+TGG | - | chr7_2:67032777-67032796 | Msa1070720:intron | 50.0% |
! | TCTCCTGAGTGGTCTTTTCG+CGG | + | chr7_2:67033100-67033119 | None:intergenic | 50.0% |
GGAGCAGCAGTTACCAAAAC+AGG | - | chr7_2:67033130-67033149 | Msa1070720:intron | 50.0% | |
ACAGGGGAAGGTGAATTCAG+AGG | - | chr7_2:67033664-67033683 | Msa1070720:intron | 50.0% | |
GCCGCCAAGAACGTGAAGTT+TGG | + | chr7_2:67029085-67029104 | None:intergenic | 55.0% | |
TCGCAGCCCAAGACTATCGT+TGG | - | chr7_2:67029666-67029685 | Msa1070720:intron | 55.0% | |
! | CTTGAGAGGAGCACACTCGA+AGG | + | chr7_2:67030341-67030360 | None:intergenic | 55.0% |
CTTCGAGTGTGCTCCTCTCA+AGG | - | chr7_2:67030339-67030358 | Msa1070720:CDS | 55.0% | |
! | GTAGTGGGGGGTCCGATTAA+AGG | + | chr7_2:67030428-67030447 | None:intergenic | 55.0% |
TTAATCGGACCCCCCACTAC+TGG | - | chr7_2:67030428-67030447 | Msa1070720:CDS | 55.0% | |
AATCCCACCGTCCAGTAGTG+GGG | + | chr7_2:67030442-67030461 | None:intergenic | 55.0% | |
CAATCCCACCGTCCAGTAGT+GGG | + | chr7_2:67030443-67030462 | None:intergenic | 55.0% | |
TCAATCCCACCGTCCAGTAG+TGG | + | chr7_2:67030444-67030463 | None:intergenic | 55.0% | |
GTGGGATTGATCCCCCAGAT+TGG | - | chr7_2:67030454-67030473 | Msa1070720:intron | 55.0% | |
CCAATGACCGACCAATCTGG+GGG | + | chr7_2:67030468-67030487 | None:intergenic | 55.0% | |
GGTCCAATGACCGACCAATC+TGG | + | chr7_2:67030471-67030490 | None:intergenic | 55.0% | |
TGTCCCCTTAGCTGCACCAT+TGG | + | chr7_2:67030593-67030612 | None:intergenic | 55.0% | |
AATGGTGCAGCTAAGGGGAC+AGG | - | chr7_2:67030592-67030611 | Msa1070720:CDS | 55.0% | |
CTTGAGTCATCCCTCCATCG+AGG | + | chr7_2:67030889-67030908 | None:intergenic | 55.0% | |
CCTGACAATGGAGCACAAGC+TGG | + | chr7_2:67031718-67031737 | None:intergenic | 55.0% | |
CCAGCTTGTGCTCCATTGTC+AGG | - | chr7_2:67031715-67031734 | Msa1070720:CDS | 55.0% | |
GTTTGGGCAAGCACTCCCAA+CGG | - | chr7_2:67032524-67032543 | Msa1070720:CDS | 55.0% | |
GCTGCATATCAGGAAGCTGG+TGG | - | chr7_2:67032563-67032582 | Msa1070720:CDS | 55.0% | |
! | CTCCTGAGTGGTCTTTTCGC+GGG | + | chr7_2:67033099-67033118 | None:intergenic | 55.0% |
AGCTACTGCAGATGCAGCAC+AGG | - | chr7_2:67033646-67033665 | Msa1070720:intron | 55.0% | |
GCTACTGCAGATGCAGCACA+GGG | - | chr7_2:67033647-67033666 | Msa1070720:intron | 55.0% | |
CTACTGCAGATGCAGCACAG+GGG | - | chr7_2:67033648-67033667 | Msa1070720:intron | 55.0% | |
GGAGCACACTCGAAGGTCTC+TGG | + | chr7_2:67030334-67030353 | None:intergenic | 60.0% | |
TGTGCTCCTCTCAAGGTCCC+AGG | - | chr7_2:67030346-67030365 | Msa1070720:CDS | 60.0% | |
ATCCCACCGTCCAGTAGTGG+GGG | + | chr7_2:67030441-67030460 | None:intergenic | 60.0% | |
! | CCCCCAGATTGGTCGGTCAT+TGG | - | chr7_2:67030465-67030484 | Msa1070720:intron | 60.0% |
GACGGGCAAGGAGATTGGAG+TGG | - | chr7_2:67030845-67030864 | Msa1070720:CDS | 60.0% | |
TGGCAGCAGGATAGGTGGAC+TGG | - | chr7_2:67032782-67032801 | Msa1070720:intron | 60.0% | |
GTCCCGCGAAAAGACCACTC+AGG | - | chr7_2:67033094-67033113 | Msa1070720:intron | 60.0% | |
TGCAGATGCAGCACAGGGGA+AGG | - | chr7_2:67033652-67033671 | Msa1070720:intron | 60.0% | |
TCGGACCCCCCACTACTGGA+CGG | - | chr7_2:67030432-67030451 | Msa1070720:CDS | 65.0% | |
ACCCCCCACTACTGGACGGT+GGG | - | chr7_2:67030436-67030455 | Msa1070720:intron | 65.0% | |
! | TCCCACCGTCCAGTAGTGGG+GGG | + | chr7_2:67030440-67030459 | None:intergenic | 65.0% |
GACCCCCCACTACTGGACGG+TGG | - | chr7_2:67030435-67030454 | Msa1070720:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 67029040 | 67034120 | 67029040 | ID=Msa1070720;Name=Msa1070720 |
chr7_2 | mRNA | 67029040 | 67034120 | 67029040 | ID=Msa1070720-mRNA-1;Parent=Msa1070720;Name=Msa1070720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=90|0.87|0.88|1|1|1|9|375|662 |
chr7_2 | exon | 67029040 | 67029591 | 67029040 | ID=Msa1070720-mRNA-1:exon:14472;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67030009 | 67030155 | 67030009 | ID=Msa1070720-mRNA-1:exon:14471;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67030241 | 67030453 | 67030241 | ID=Msa1070720-mRNA-1:exon:14470;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67030550 | 67031113 | 67030550 | ID=Msa1070720-mRNA-1:exon:14469;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67031239 | 67031835 | 67031239 | ID=Msa1070720-mRNA-1:exon:14468;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67032253 | 67032320 | 67032253 | ID=Msa1070720-mRNA-1:exon:14467;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67032481 | 67032586 | 67032481 | ID=Msa1070720-mRNA-1:exon:14466;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67033450 | 67033538 | 67033450 | ID=Msa1070720-mRNA-1:exon:14465;Parent=Msa1070720-mRNA-1 |
chr7_2 | exon | 67034003 | 67034120 | 67034003 | ID=Msa1070720-mRNA-1:exon:14464;Parent=Msa1070720-mRNA-1 |
chr7_2 | five_prime_UTR | 67034031 | 67034120 | 67034031 | ID=Msa1070720-mRNA-1:five_prime_utr;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67034003 | 67034030 | 67034003 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67033450 | 67033538 | 67033450 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67032481 | 67032586 | 67032481 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67032253 | 67032320 | 67032253 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67031239 | 67031835 | 67031239 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67030550 | 67031113 | 67030550 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67030241 | 67030453 | 67030241 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67030009 | 67030155 | 67030009 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | CDS | 67029415 | 67029591 | 67029415 | ID=Msa1070720-mRNA-1:cds;Parent=Msa1070720-mRNA-1 |
chr7_2 | three_prime_UTR | 67029040 | 67029414 | 67029040 | ID=Msa1070720-mRNA-1:three_prime_utr;Parent=Msa1070720-mRNA-1 |
Gene Sequence |
Protein sequence |