AlfalfaGEDB | Msa1465390

M. sativa cultivar zhongmu-4 / Msa1465390

KEGG: K13412
GO: GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010119 GO:0010359 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022898 GO:0023052 GO:0032409 GO:0032412 GO:0032870 GO:0032879 GO:0033993 GO:0034762 GO:0034765 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051716 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1903959
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1465390	XP_003611046.1	100.000	159	0	0	1	159	359	517	8.31e-107	324

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1465390	sp\|Q6I587\|CDPKF_ORYSJ	78.481	158	34	0	1	158	383	540	5.72e-88	269

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1465390	G7KAQ8	100.000	159	0	0	1	159	359	517	3.97e-107	324

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa1394380	Msa1465390	0.820668	6.073849e-53	-8.615850e-47
Msa1419690	Msa1465390	0.805050	1.609579e-49	-8.615850e-47
Msa1464810	Msa1465390	0.823066	1.691379e-53	-8.615850e-47
Msa0818060	Msa1465390	0.802239	6.166533e-49	-8.615850e-47
Msa0831110	Msa1465390	0.808993	2.356579e-50	-8.615850e-47
Msa0211150	Msa1465390	0.810617	1.054576e-50	-8.615850e-47
Msa0467490	Msa1465390	0.805063	1.599449e-49	-8.615850e-47
Msa0479170	Msa1465390	0.820700	5.971991e-53	-8.615850e-47
Msa0266350	Msa1465390	0.804588	2.010342e-49	-8.615850e-47
Msa1186020	Msa1465390	0.817956	2.519857e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1465390	MtrunA17_Chr5g0397101	100.000	159	0	0	1	159	359	517	7.65e-111	324
Msa1465390	MtrunA17_Chr8g0387671	91.824	159	12	1	1	159	359	516	8.93e-100	296
Msa1465390	MtrunA17_Chr0c02g0489761	74.684	158	40	0	1	158	371	528	1.22e-78	242
Msa1465390	MtrunA17_Chr4g0074811	74.000	150	39	0	1	150	384	533	3.03e-78	241
Msa1465390	MtrunA17_Chr5g0441691	73.418	158	42	0	1	158	361	518	1.67e-77	239
Msa1465390	MtrunA17_Chr5g0444171	75.000	148	37	0	1	148	385	532	2.83e-77	239
Msa1465390	MtrunA17_Chr3g0098951	72.436	156	36	1	1	149	376	531	1.75e-75	234
Msa1465390	MtrunA17_Chr1g0157131	69.536	151	46	0	1	151	367	517	1.12e-70	221
Msa1465390	MtrunA17_Chr1g0170281	62.821	156	57	1	1	156	411	565	5.02e-63	202
Msa1465390	MtrunA17_Chr5g0448721	66.443	149	49	1	1	149	389	536	5.97e-63	202
Msa1465390	MtrunA17_Chr1g0176751	62.025	158	59	1	1	158	417	573	1.61e-61	199
Msa1465390	MtrunA17_Chr1g0200601	60.377	159	62	1	1	159	323	480	1.85e-60	194
Msa1465390	MtrunA17_Chr4g0074791	61.333	150	47	2	1	150	389	527	1.10e-57	187
Msa1465390	MtrunA17_Chr7g0267751	59.355	155	62	1	1	155	428	581	1.79e-57	189
Msa1465390	MtrunA17_Chr3g0131181	59.732	149	59	1	1	149	322	469	7.10e-57	185
Msa1465390	MtrunA17_Chr8g0385341	61.745	149	56	1	1	149	323	470	8.57e-57	185
Msa1465390	MtrunA17_Chr4g0059951	56.667	150	62	2	1	148	366	514	9.66e-51	170
Msa1465390	MtrunA17_Chr1g0176421	50.562	178	55	2	1	146	454	630	1.06e-49	168
Msa1465390	MtrunA17_Chr7g0242561	50.336	149	73	1	1	148	349	497	1.84e-43	150
Msa1465390	MtrunA17_Chr4g0033371	45.946	148	80	0	1	148	365	512	1.06e-42	148
Msa1465390	MtrunA17_Chr1g0173541	46.980	149	78	1	1	148	345	493	1.14e-41	145
Msa1465390	MtrunA17_Chr7g0257751	47.651	149	77	1	1	148	351	499	7.29e-41	143
Msa1465390	MtrunA17_Chr5g0441781	69.048	84	26	0	75	158	1	84	2.15e-37	123
Msa1465390	MtrunA17_Chr5g0440931	39.189	148	84	3	2	145	1	146	8.80e-28	100
Msa1465390	MtrunA17_Chr6g0460211	38.514	148	85	3	2	145	1	146	2.95e-27	99.8
Msa1465390	MtrunA17_Chr1g0166281	37.162	148	87	3	2	145	1	146	5.44e-27	99.0
Msa1465390	MtrunA17_Chr7g0254731	37.838	148	86	3	2	145	1	146	7.73e-27	98.6
Msa1465390	MtrunA17_Chr3g0093271	38.514	148	85	3	2	145	52	197	1.00e-26	99.8
Msa1465390	MtrunA17_Chr1g0188171	36.486	148	88	3	2	145	1	146	1.23e-25	95.5
Msa1465390	MtrunA17_Chr5g0405421	36.129	155	87	3	2	149	395	544	2.34e-24	98.2
Msa1465390	MtrunA17_Chr4g0062221	34.932	146	87	3	14	153	12	155	2.89e-23	90.1
Msa1465390	MtrunA17_Chr4g0033601	36.170	141	82	3	14	148	6	144	8.61e-21	83.2
Msa1465390	MtrunA17_Chr7g0245231	33.566	143	93	2	5	145	22	164	2.34e-20	82.4
Msa1465390	MtrunA17_Chr8g0366401	34.722	144	85	3	6	142	10	151	9.28e-20	80.9
Msa1465390	MtrunA17_Chr1g0185001	30.667	150	93	4	2	145	1	145	7.95e-19	77.8
Msa1465390	MtrunA17_Chr8g0368681	32.692	156	97	3	7	156	6	159	1.39e-18	77.8
Msa1465390	MtrunA17_Chr7g0256171	36.429	140	83	3	14	148	6	144	2.24e-18	77.0
Msa1465390	MtrunA17_Chr5g0434951	35.766	137	79	4	14	145	5	137	3.19e-18	76.3
Msa1465390	MtrunA17_Chr6g0450921	34.783	138	84	3	14	147	30	165	3.57e-18	76.6
Msa1465390	MtrunA17_Chr1g0169581	33.566	143	81	4	14	147	5	142	5.37e-18	75.5
Msa1465390	MtrunA17_Chr3g0111371	35.507	138	79	4	14	147	6	137	5.61e-18	75.5
Msa1465390	MtrunA17_Chr8g0391691	37.879	132	76	3	14	141	37	166	7.59e-18	76.3
Msa1465390	MtrunA17_Chr1g0161211	35.714	140	84	3	14	149	47	184	1.53e-17	75.9
Msa1465390	MtrunA17_Chr7g0245911	35.135	148	81	5	14	148	48	193	4.92e-17	74.3
Msa1465390	MtrunA17_Chr8g0392951	34.815	135	83	2	14	145	25	157	1.29e-16	72.8
Msa1465390	MtrunA17_Chr4g0057651	36.220	127	76	2	22	145	15	139	1.51e-16	71.6
Msa1465390	MtrunA17_Chr7g0274101	35.811	148	89	3	2	145	1	146	1.78e-16	72.0
Msa1465390	MtrunA17_Chr2g0329371	34.043	141	87	2	14	148	65	205	2.07e-16	73.2
Msa1465390	MtrunA17_Chr3g0116151	32.117	137	88	2	13	146	6	140	7.71e-16	70.1
Msa1465390	MtrunA17_Chr3g0116141	32.117	137	88	2	13	146	5	139	8.12e-16	69.7
Msa1465390	MtrunA17_Chr6g0482731	33.582	134	87	2	14	145	27	160	1.40e-15	70.1
Msa1465390	MtrunA17_Chr4g0057661	35.433	127	77	2	22	145	15	139	1.43e-15	69.3
Msa1465390	MtrunA17_Chr4g0064231	31.056	161	91	2	14	154	65	225	5.13e-15	69.7
Msa1465390	MtrunA17_Chr5g0398751	30.137	146	98	3	2	145	1	144	9.92e-15	67.4
Msa1465390	MtrunA17_Chr8g0351681	34.211	152	86	6	9	148	45	194	1.14e-14	68.2
Msa1465390	MtrunA17_Chr7g0256701	33.333	147	75	6	14	145	74	212	1.17e-14	68.6
Msa1465390	MtrunA17_Chr4g0044961	33.088	136	83	3	14	145	58	189	1.28e-14	68.2
Msa1465390	MtrunA17_Chr4g0057641	34.646	127	78	2	22	145	15	139	1.46e-14	66.6
Msa1465390	MtrunA17_Chr5g0409441	31.343	134	90	2	10	141	19	152	4.71e-14	65.9
Msa1465390	MtrunA17_Chr8g0373691	32.117	137	87	3	13	145	53	187	1.07e-13	65.5
Msa1465390	MtrunA17_Chr8g0355131	31.579	152	92	3	5	147	361	509	2.33e-13	66.6
Msa1465390	MtrunA17_Chr5g0402361	29.730	148	99	2	14	158	49	194	4.84e-13	65.5
Msa1465390	MtrunA17_Chr5g0402361	30.935	139	90	3	14	148	221	357	3.92e-11	60.1
Msa1465390	MtrunA17_Chr7g0225921	30.075	133	87	3	17	145	10	140	5.51e-13	62.4
Msa1465390	MtrunA17_Chr5g0441771	82.857	35	6	0	1	35	67	101	1.29e-12	60.5
Msa1465390	MtrunA17_Chr3g0100541	31.333	150	84	4	2	148	41	174	1.40e-12	62.4
Msa1465390	MtrunA17_Chr8g0385571	30.370	135	88	3	8	141	50	179	1.97e-12	63.9
Msa1465390	MtrunA17_Chr3g0131501	31.111	135	87	3	8	141	28	157	3.97e-12	63.2
Msa1465390	MtrunA17_Chr7g0245371	27.891	147	92	2	14	146	25	171	6.41e-12	60.5
Msa1465390	MtrunA17_Chr5g0402331	30.935	139	90	3	14	148	49	185	1.04e-11	60.1
Msa1465390	MtrunA17_Chr8g0369111	27.815	151	87	3	14	142	59	209	2.42e-11	59.7
Msa1465390	MtrunA17_Chr1g0160151	31.944	144	80	4	14	145	23	160	2.46e-11	58.5
Msa1465390	MtrunA17_Chr3g0125311	30.822	146	87	4	14	145	14	159	2.49e-11	58.5
Msa1465390	MtrunA17_Chr6g0459231	28.030	132	90	2	17	145	12	141	2.77e-11	58.2
Msa1465390	MtrunA17_Chr1g0169621	27.273	165	83	4	14	145	5	165	6.93e-11	57.4
Msa1465390	MtrunA17_Chr7g0252401	27.907	129	87	3	14	141	36	159	8.33e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1465390	AT4G23650.1	77.215	158	36	0	1	158	371	528	1.70e-87	265
Msa1465390	AT5G12180.1	73.418	158	42	0	1	158	366	523	5.06e-78	241
Msa1465390	AT5G19360.1	74.051	158	41	0	1	158	361	518	5.33e-78	241
Msa1465390	AT3G20410.2	72.000	150	42	0	1	150	384	533	1.48e-73	229
Msa1465390	AT3G20410.1	72.000	150	42	0	1	150	384	533	1.48e-73	229
Msa1465390	AT1G76040.1	68.874	151	47	0	1	151	166	316	4.43e-73	222
Msa1465390	AT1G76040.4	68.874	151	47	0	1	151	166	316	4.43e-73	222
Msa1465390	AT4G21940.1	72.973	148	40	0	1	148	394	541	4.90e-73	229
Msa1465390	AT4G21940.2	72.973	148	40	0	1	148	394	541	6.08e-73	228
Msa1465390	AT1G50700.1	69.333	150	46	0	1	150	366	515	1.13e-71	224
Msa1465390	AT4G04720.2	69.128	149	46	0	1	149	372	520	2.86e-71	223
Msa1465390	AT4G04720.1	69.128	149	46	0	1	149	372	520	2.86e-71	223
Msa1465390	AT1G76040.2	68.874	151	47	0	1	151	404	554	1.25e-70	223
Msa1465390	AT4G04710.3	67.568	148	48	0	1	148	311	458	1.16e-66	210
Msa1465390	AT4G04710.2	67.568	148	48	0	1	148	325	472	1.76e-66	210
Msa1465390	AT4G04710.1	67.568	148	48	0	1	148	338	485	2.19e-66	210
Msa1465390	AT1G50700.2	59.091	176	46	1	1	150	366	541	6.21e-66	210
Msa1465390	AT1G61950.1	66.207	145	49	0	2	146	393	537	1.33e-64	206
Msa1465390	AT4G04710.4	66.667	150	48	1	1	148	338	487	2.10e-64	205
Msa1465390	AT4G04695.1	65.101	149	52	0	1	149	324	472	2.31e-63	202
Msa1465390	AT4G38230.1	64.865	148	51	1	1	148	173	319	1.18e-62	196
Msa1465390	AT2G17290.1	64.430	149	52	1	1	149	378	525	1.72e-61	198
Msa1465390	AT2G17290.2	64.430	149	52	1	1	149	378	525	1.72e-61	198
Msa1465390	AT4G04740.4	61.074	149	58	0	1	149	361	509	1.89e-61	197
Msa1465390	AT4G04740.6	61.074	149	58	0	1	149	361	509	1.89e-61	197
Msa1465390	AT4G04740.5	61.074	149	58	0	1	149	361	509	1.89e-61	197
Msa1465390	AT4G04740.3	61.074	149	58	0	1	149	361	509	1.89e-61	197
Msa1465390	AT4G04740.1	61.074	149	58	0	1	149	361	509	1.89e-61	197
Msa1465390	AT4G04740.7	61.074	149	58	0	1	149	361	509	1.89e-61	197
Msa1465390	AT4G38230.4	64.865	148	51	1	1	148	317	463	3.42e-61	196
Msa1465390	AT4G38230.3	64.865	148	51	1	1	148	317	463	3.42e-61	196
Msa1465390	AT4G38230.2	64.865	148	51	1	1	148	347	493	5.21e-61	196
Msa1465390	AT3G10660.2	62.416	149	55	1	1	149	479	626	1.36e-59	195
Msa1465390	AT3G10660.1	62.416	149	55	1	1	149	479	626	1.36e-59	195
Msa1465390	AT1G35670.1	61.745	149	56	1	1	149	319	466	2.22e-59	192
Msa1465390	AT5G04870.1	63.087	149	54	1	1	149	443	590	4.30e-59	193
Msa1465390	AT4G35310.2	61.745	149	56	1	1	149	390	537	1.45e-58	191
Msa1465390	AT4G35310.1	61.745	149	56	1	1	149	390	537	1.45e-58	191
Msa1465390	AT4G09570.1	60.403	149	58	1	1	149	318	465	6.98e-58	188
Msa1465390	AT4G04700.1	62.069	145	55	0	2	146	325	469	8.30e-57	185
Msa1465390	AT2G38910.1	60.274	146	57	1	1	146	427	571	3.21e-55	182
Msa1465390	AT5G23580.1	59.184	147	59	1	1	147	315	460	1.24e-53	177
Msa1465390	AT4G04740.2	59.848	132	53	0	1	132	361	492	1.63e-51	172
Msa1465390	AT4G21940.3	73.737	99	26	0	1	99	394	492	1.66e-45	155
Msa1465390	AT5G12480.2	50.667	150	72	1	1	148	258	407	2.56e-45	154
Msa1465390	AT5G12480.1	50.667	150	72	1	1	148	352	501	1.43e-44	154
Msa1465390	AT1G74740.1	50.336	149	73	1	1	148	352	500	1.94e-44	153
Msa1465390	AT1G76040.3	69.307	101	31	0	1	101	404	504	5.16e-44	151
Msa1465390	AT3G51850.1	52.000	150	69	2	1	148	347	495	2.01e-43	150
Msa1465390	AT5G19450.2	50.000	150	73	2	1	148	350	499	4.75e-43	149
Msa1465390	AT5G19450.1	50.000	150	73	2	1	148	350	499	4.75e-43	149
Msa1465390	AT1G50700.3	68.687	99	31	0	1	99	366	464	2.50e-42	147
Msa1465390	AT1G18890.1	48.993	149	75	1	1	148	356	504	7.78e-41	144
Msa1465390	AT2G31500.1	44.737	152	80	1	1	148	359	510	2.87e-40	142
Msa1465390	AT3G57530.1	47.973	148	77	0	1	148	356	503	5.36e-39	139
Msa1465390	AT2G41860.1	44.966	149	81	1	1	148	347	495	7.19e-36	130
Msa1465390	AT2G41860.2	44.966	149	81	1	1	148	347	495	7.49e-36	130
Msa1465390	AT3G51850.2	49.624	133	64	2	1	131	347	478	2.65e-33	123
Msa1465390	AT1G66410.1	39.189	148	84	3	2	145	1	146	1.04e-27	101
Msa1465390	AT5G37780.1	39.189	148	84	3	2	145	1	146	1.04e-27	101
Msa1465390	AT3G56800.1	38.514	148	85	3	2	145	1	146	3.47e-27	99.8
Msa1465390	AT2G41110.1	38.514	148	85	3	2	145	1	146	3.47e-27	99.8
Msa1465390	AT2G27030.1	38.514	148	85	3	2	145	1	146	3.47e-27	99.8
Msa1465390	AT2G27030.3	38.312	154	86	4	2	148	1	152	3.63e-27	100
Msa1465390	AT3G43810.1	38.514	148	85	3	2	145	1	146	4.08e-27	99.8
Msa1465390	AT5G21274.1	37.838	148	86	3	2	145	1	146	1.15e-26	98.6
Msa1465390	AT3G43810.2	38.514	148	85	3	2	145	1	146	1.25e-26	100
Msa1465390	AT5G66210.1	36.129	155	87	3	2	149	358	507	2.55e-25	101
Msa1465390	AT5G66210.2	36.129	155	87	3	2	149	358	507	2.55e-25	101
Msa1465390	AT3G59440.1	36.806	144	88	1	9	149	47	190	3.41e-24	93.6
Msa1465390	AT5G37780.2	35.583	163	84	4	2	145	1	161	7.51e-24	91.7
Msa1465390	AT3G22930.1	36.806	144	85	3	6	145	28	169	7.98e-24	92.0
Msa1465390	AT2G41110.2	35.625	160	85	4	2	145	1	158	1.27e-23	90.9
Msa1465390	AT2G17890.1	33.548	155	91	3	2	149	404	553	1.32e-23	96.3
Msa1465390	AT1G05990.1	38.298	141	82	2	14	149	6	146	2.48e-23	90.1
Msa1465390	AT4G14640.1	36.806	144	85	3	6	145	6	147	3.19e-23	89.7
Msa1465390	AT1G66410.2	36.709	158	84	4	2	145	1	156	7.45e-23	89.0
Msa1465390	AT1G32250.1	35.762	151	85	4	2	142	5	153	9.75e-23	89.0
Msa1465390	AT4G36070.2	31.410	156	95	3	1	149	366	516	1.11e-22	93.6
Msa1465390	AT4G36070.1	31.410	156	95	3	1	149	366	516	1.12e-22	93.6
Msa1465390	AT2G43290.1	36.806	144	82	2	14	148	66	209	1.76e-22	89.4
Msa1465390	AT5G37780.4	39.516	124	69	3	26	145	12	133	2.82e-22	87.0
Msa1465390	AT5G37780.3	33.333	174	84	4	2	145	1	172	4.28e-22	87.4
Msa1465390	AT2G41090.1	34.667	150	93	3	2	149	1	147	3.55e-21	85.5
Msa1465390	AT4G03290.1	36.620	142	83	2	14	148	6	147	4.88e-21	84.3
Msa1465390	AT3G50360.1	34.783	138	84	3	14	147	28	163	7.94e-21	84.0
Msa1465390	AT1G66410.4	40.367	109	59	3	41	145	4	110	7.59e-20	80.1
Msa1465390	AT1G66410.3	40.367	109	59	3	41	145	4	110	7.59e-20	80.1
Msa1465390	AT3G43810.4	40.367	109	59	3	41	145	4	110	1.42e-19	79.3
Msa1465390	AT3G43810.3	40.367	109	59	3	41	145	4	110	1.42e-19	79.3
Msa1465390	AT4G14640.2	37.398	123	71	3	27	145	9	129	1.44e-19	79.7
Msa1465390	AT1G18530.1	34.667	150	90	4	8	151	2	149	1.72e-19	80.1
Msa1465390	AT5G66210.5	39.286	112	61	2	2	106	358	469	3.42e-19	83.6
Msa1465390	AT1G66400.1	34.532	139	81	4	14	145	16	151	3.45e-19	79.3
Msa1465390	AT5G66210.3	39.130	115	63	2	2	109	358	472	4.31e-19	83.2
Msa1465390	AT2G41100.4	29.518	166	95	4	2	147	1	164	3.23e-18	80.1
Msa1465390	AT2G41100.4	30.120	166	93	4	1	145	89	252	6.76e-18	79.0
Msa1465390	AT2G41100.1	29.518	166	95	4	2	147	1	164	3.23e-18	80.1
Msa1465390	AT2G41100.1	30.120	166	93	4	1	145	89	252	6.76e-18	79.0
Msa1465390	AT3G10190.1	30.667	150	97	3	1	145	58	205	3.83e-18	77.8
Msa1465390	AT2G41100.7	30.120	166	93	4	1	145	54	217	4.23e-18	79.3
Msa1465390	AT2G41100.7	29.921	127	67	4	41	147	5	129	1.15e-11	61.6
Msa1465390	AT2G41100.6	30.120	166	93	4	1	145	54	217	4.23e-18	79.3
Msa1465390	AT2G41100.6	29.921	127	67	4	41	147	5	129	1.15e-11	61.6
Msa1465390	AT2G41100.3	30.120	166	93	4	1	145	54	217	4.23e-18	79.3
Msa1465390	AT2G41100.3	29.921	127	67	4	41	147	5	129	1.15e-11	61.6
Msa1465390	AT3G07490.1	33.813	139	88	2	14	148	6	144	1.53e-17	75.1
Msa1465390	AT3G25600.1	31.646	158	100	4	2	153	1	156	2.02e-17	75.1
Msa1465390	AT4G37010.1	32.609	138	87	3	14	147	28	163	2.61e-17	74.7
Msa1465390	AT4G37010.2	32.609	138	87	3	14	147	32	167	3.13e-17	74.7
Msa1465390	AT4G12860.1	33.813	139	88	2	14	148	6	144	5.26e-17	73.6
Msa1465390	AT5G37770.1	34.266	143	84	4	14	148	18	158	6.63e-17	73.6
Msa1465390	AT5G37770.2	34.266	143	84	4	14	148	18	158	6.63e-17	73.6
Msa1465390	AT2G15680.1	31.973	147	94	3	6	149	43	186	1.86e-16	73.2
Msa1465390	AT1G24620.1	35.417	144	87	3	10	149	34	175	2.84e-16	72.4
Msa1465390	AT1G18210.2	32.331	133	86	2	14	145	24	153	3.02e-16	72.0
Msa1465390	AT1G18210.1	32.331	133	86	2	14	145	24	153	3.02e-16	72.0
Msa1465390	AT3G03000.1	34.507	142	86	3	6	142	13	152	1.68e-15	70.1
Msa1465390	AT5G17470.1	29.252	147	96	3	12	152	1	145	2.14e-15	69.3
Msa1465390	AT1G73630.1	30.282	142	91	4	14	153	21	156	4.54e-15	68.9
Msa1465390	AT2G36180.1	30.714	140	86	4	14	145	1	137	7.80e-15	67.8
Msa1465390	AT5G42380.1	33.333	144	77	4	14	146	50	185	1.14e-14	68.2
Msa1465390	AT3G22930.2	35.294	102	65	1	6	106	28	129	1.84e-14	66.6
Msa1465390	AT2G35890.2	44.706	85	46	1	1	84	425	509	2.26e-14	69.7
Msa1465390	AT2G35890.1	44.706	85	46	1	1	84	425	509	2.26e-14	69.7
Msa1465390	AT3G51850.3	50.000	70	35	0	1	70	347	416	1.62e-13	67.4
Msa1465390	AT4G14640.3	35.294	102	65	1	6	106	6	107	2.02e-13	63.5
Msa1465390	AT3G51920.1	29.730	148	98	3	2	145	1	146	6.58e-13	62.8
Msa1465390	AT4G20780.1	27.742	155	90	2	14	146	30	184	1.87e-12	62.4
Msa1465390	AT1G76640.1	30.935	139	88	3	14	146	23	159	3.00e-12	61.2
Msa1465390	AT1G62820.1	28.472	144	99	3	4	145	4	145	5.07e-12	60.5
Msa1465390	AT1G12310.1	27.778	144	100	3	4	145	4	145	6.39e-12	60.1
Msa1465390	AT5G07320.1	29.787	141	92	4	2	141	27	161	7.37e-12	62.8
Msa1465390	AT2G41100.2	30.952	126	64	4	41	145	4	127	2.13e-11	59.7

Find 55 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACTCATAAGTTTGTAATTA+TGG	0.145291	tig0045211:-2075	Msa1465390:intergenic
CTTTCTGAAGAAGAAATTAT+AGG	0.211133	tig0045211:+305	Msa1465390:CDS
CGAAATCTTAGTACCTAGTT+TGG	0.279329	tig0045211:-405	Msa1465390:intergenic
GTATTCTTGCCGTGAAAATA+AGG	0.284326	tig0045211:-2204	Msa1465390:intergenic
CCATACATCGCCTGTTTCAC+TGG	0.285345	tig0045211:+1768	Msa1465390:three_prime_UTR
CTAACTGTGACACTATAAAA+TGG	0.307247	tig0045211:-2151	Msa1465390:intergenic
GAAATCTTAGTACCTAGTTT+GGG	0.314434	tig0045211:-404	Msa1465390:intergenic
CGTTTGTTGGTTATCAAGTC+TGG	0.335990	tig0045211:-1726	Msa1465390:intergenic
CACCCATGTTGTACTTTGTA+AGG	0.339000	tig0045211:-1456	Msa1465390:intergenic
CAAACTAGGTACTAAGATTT+CGG	0.342242	tig0045211:+406	Msa1465390:CDS
TGGTCTTGGCACGCCTTAGT+TGG	0.356511	tig0045211:+2100	Msa1465390:three_prime_UTR
TAATTATTTGCGACGTTTGT+TGG	0.356767	tig0045211:-1739	Msa1465390:intergenic
CAGGCTGATGTTGACGGAAA+TGG	0.364374	tig0045211:+984	Msa1465390:intron
AATATTCAAAAGCTTTGTAT+AGG	0.371934	tig0045211:-1073	Msa1465390:intergenic
ATTACAAACTTATGAGTTGT+TGG	0.375534	tig0045211:+2080	Msa1465390:three_prime_UTR
ATCGCCTGTTTCACTGGGTT+CGG	0.394033	tig0045211:+1774	Msa1465390:three_prime_UTR
GCCTCCGAACCCAGTGAAAC+AGG	0.400571	tig0045211:-1778	Msa1465390:intergenic
TGGACATAATTAGTGAAATT+AGG	0.402218	tig0045211:-2017	Msa1465390:intergenic
TCCACTGTTATCTGTATCCA+TGG	0.419497	tig0045211:-348	Msa1465390:intergenic
TATAAATTCAATATAATCAA+TGG	0.429517	tig0045211:-1009	Msa1465390:intergenic
AACTTATGAGTTGTTGGTCT+TGG	0.438940	tig0045211:+2086	Msa1465390:three_prime_UTR
GGGTGATGAGAAAACAATAA+AGG	0.448457	tig0045211:+1474	Msa1465390:CDS
GTCTGAAGTAAGGCAGTTGA+TGG	0.452437	tig0045211:+430	Msa1465390:CDS
ACGATTTGTAGCTTTACAAC+AGG	0.457257	tig0045211:-2176	Msa1465390:intergenic
GGTCTTGGCACGCCTTAGTT+GGG	0.460027	tig0045211:+2101	Msa1465390:three_prime_UTR
TGGATTGCCTTTCCTCATCA+TGG	0.460470	tig0045211:-1706	Msa1465390:intergenic
CCAGTGAAACAGGCGATGTA+TGG	0.472052	tig0045211:-1768	Msa1465390:intergenic
GAAGGAAATGTTTAAATCCA+TGG	0.478696	tig0045211:+331	Msa1465390:CDS
AGAAGAAATTATAGGCTTGA+AGG	0.479329	tig0045211:+313	Msa1465390:CDS
GTACATTACAAAAGAAGAGT+TGG	0.496424	tig0045211:+1426	Msa1465390:CDS
TACCATGCACTTGAATAGAA+TGG	0.512924	tig0045211:+1037	Msa1465390:CDS
ATTCAAAAGCTTTGTATAGG+TGG	0.516357	tig0045211:-1070	Msa1465390:intergenic
AGTTATCACTTACCCAACTA+AGG	0.524772	tig0045211:-2113	Msa1465390:intergenic
CATACATCGCCTGTTTCACT+GGG	0.528769	tig0045211:+1769	Msa1465390:three_prime_UTR
TTCCATTCTATTCAAGTGCA+TGG	0.528987	tig0045211:-1039	Msa1465390:intergenic
AAAGCTGGTCTCCCCAAACT+AGG	0.529317	tig0045211:+392	Msa1465390:CDS
TATTTGCAGGCTGATGTTGA+CGG	0.543234	tig0045211:+978	Msa1465390:intron
GGTTCGGAGGCAGAAGACTC+AGG	0.547194	tig0045211:+1790	Msa1465390:three_prime_UTR
GCCTGTTTCACTGGGTTCGG+AGG	0.550965	tig0045211:+1777	Msa1465390:three_prime_UTR
AGATTTCGGAGTCTGAAGTA+AGG	0.567128	tig0045211:+420	Msa1465390:CDS
GCTAGGACACTTGCATTGCA+TGG	0.571951	tig0045211:+1911	Msa1465390:intron
TAGAGAGAAAATTGTCTCGC+GGG	0.573803	tig0045211:-1946	Msa1465390:intergenic
ACCCATGTTGTACTTTGTAA+GGG	0.578215	tig0045211:-1455	Msa1465390:intergenic
AGTAAGGCAGTTGATGGAAG+CGG	0.579747	tig0045211:+436	Msa1465390:CDS
CTTGAATAGAATGGAAAGAG+AGG	0.583391	tig0045211:+1046	Msa1465390:CDS
GGATGGAAGAATTAACTATG+AGG	0.584897	tig0045211:+1674	Msa1465390:intron
AACAATCAATACGAATTACA+AGG	0.595886	tig0045211:-1994	Msa1465390:intergenic
AAATCTTAGTACCTAGTTTG+GGG	0.615766	tig0045211:-403	Msa1465390:intergenic
TTTGTAGCCATGATGAGGAA+AGG	0.619046	tig0045211:+1699	Msa1465390:CDS
AACGGGGCAACGATTTGTGA+TGG	0.622134	tig0045211:-2037	Msa1465390:intergenic
TGCCCTTACAAAGTACAACA+TGG	0.622288	tig0045211:+1453	Msa1465390:CDS
AGGAGTTTGTAGCCATGATG+AGG	0.637555	tig0045211:+1694	Msa1465390:CDS
GTAGAGAGAAAATTGTCTCG+CGG	0.653034	tig0045211:-1947	Msa1465390:intergenic
GCCCTTACAAAGTACAACAT+GGG	0.660132	tig0045211:+1454	Msa1465390:CDS
TCCATGGATACAGATAACAG+TGG	0.754348	tig0045211:+347	Msa1465390:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGTTATAAATTATAATAGA+GGG	-	tig0045211:954-973	Msa1465390:intergenic	10.0%
!!	TATGTTATAAATTATAATAG+AGG	-	tig0045211:955-974	Msa1465390:intergenic	10.0%
!!	TATAAATTCAATATAATCAA+TGG	-	tig0045211:1012-1031	Msa1465390:intergenic	10.0%
!!	ATGTTATAAATTATAATAGA+GGG	-	tig0045211:954-973	Msa1465390:intergenic	10.0%
!!	TATGTTATAAATTATAATAG+AGG	-	tig0045211:955-974	Msa1465390:intergenic	10.0%
!!	TATAAATTCAATATAATCAA+TGG	-	tig0045211:1012-1031	Msa1465390:intergenic	10.0%
!!	ATATGATTATACAATATCAA+TGG	-	tig0045211:830-849	Msa1465390:intergenic	15.0%
!!	TGTTATAAATTATAATAGAG+GGG	-	tig0045211:953-972	Msa1465390:intergenic	15.0%
!!	AAATTCATTTATAATAAGAG+AGG	-	tig0045211:1152-1171	Msa1465390:intergenic	15.0%
!!	ATATGATTATACAATATCAA+TGG	-	tig0045211:830-849	Msa1465390:intergenic	15.0%
!!	TGTTATAAATTATAATAGAG+GGG	-	tig0045211:953-972	Msa1465390:intergenic	15.0%
!!	AAATTCATTTATAATAAGAG+AGG	-	tig0045211:1152-1171	Msa1465390:intergenic	15.0%
!!	ATTCTTGTAATTAATGTAAC+TGG	+	tig0045211:764-783	Msa1465390:intron	20.0%
!!	ACAATATCAATGGAAAATAT+GGG	-	tig0045211:820-839	Msa1465390:intergenic	20.0%
!!	TACAATATCAATGGAAAATA+TGG	-	tig0045211:821-840	Msa1465390:intergenic	20.0%
!!	TGTATAATCATATACGTATT+AGG	+	tig0045211:837-856	Msa1465390:intron	20.0%
!!	GTATAATCATATACGTATTA+GGG	+	tig0045211:838-857	Msa1465390:intron	20.0%
!!	TTATAAATTATAATAGAGGG+GGG	-	tig0045211:951-970	Msa1465390:intergenic	20.0%
!!	GTTATAAATTATAATAGAGG+GGG	-	tig0045211:952-971	Msa1465390:intergenic	20.0%
!!!	TTATAACATATCTTATTTGC+AGG	+	tig0045211:965-984	Msa1465390:intron	20.0%
!!!	AATATTCAAAAGCTTTGTAT+AGG	-	tig0045211:1076-1095	Msa1465390:intergenic	20.0%
!!!	TTAGGAATTTTTTTTATCAG+CGG	+	tig0045211:1126-1145	Msa1465390:intron	20.0%
!!	AAATGAATTTAAACATGACA+TGG	+	tig0045211:1162-1181	Msa1465390:intron	20.0%
!!!	AACATTTACAATTTTGTTTC+AGG	-	tig0045211:1609-1628	Msa1465390:intergenic	20.0%
!!!	TGGTTATTAATTTTAAGCAA+CGG	-	tig0045211:2058-2077	Msa1465390:intergenic	20.0%
!!	AACTCATAAGTTTGTAATTA+TGG	-	tig0045211:2078-2097	Msa1465390:intergenic	20.0%
!!	ATTCTTGTAATTAATGTAAC+TGG	+	tig0045211:764-783	Msa1465390:intron	20.0%
!!	ACAATATCAATGGAAAATAT+GGG	-	tig0045211:820-839	Msa1465390:intergenic	20.0%
!!	TACAATATCAATGGAAAATA+TGG	-	tig0045211:821-840	Msa1465390:intergenic	20.0%
!!	TGTATAATCATATACGTATT+AGG	+	tig0045211:837-856	Msa1465390:intron	20.0%
!!	GTATAATCATATACGTATTA+GGG	+	tig0045211:838-857	Msa1465390:intron	20.0%
!!	TTATAAATTATAATAGAGGG+GGG	-	tig0045211:951-970	Msa1465390:intergenic	20.0%
!!	GTTATAAATTATAATAGAGG+GGG	-	tig0045211:952-971	Msa1465390:intergenic	20.0%
!!!	TTATAACATATCTTATTTGC+AGG	+	tig0045211:965-984	Msa1465390:intron	20.0%
!!!	AATATTCAAAAGCTTTGTAT+AGG	-	tig0045211:1076-1095	Msa1465390:intergenic	20.0%
!!!	TTAGGAATTTTTTTTATCAG+CGG	+	tig0045211:1126-1145	Msa1465390:intron	20.0%
!!	AAATGAATTTAAACATGACA+TGG	+	tig0045211:1162-1181	Msa1465390:intron	20.0%
!!!	AACATTTACAATTTTGTTTC+AGG	-	tig0045211:1609-1628	Msa1465390:intergenic	20.0%
!!!	TGGTTATTAATTTTAAGCAA+CGG	-	tig0045211:2058-2077	Msa1465390:intergenic	20.0%
!!	AACTCATAAGTTTGTAATTA+TGG	-	tig0045211:2078-2097	Msa1465390:intergenic	20.0%
!!	CTTTCTGAAGAAGAAATTAT+AGG	+	tig0045211:305-324	Msa1465390:CDS	25.0%
!	ATATTCAAACATTACGCTAT+TGG	-	tig0045211:522-541	Msa1465390:intergenic	25.0%
!	ATTAATTACAAGAATCAGTC+AGG	-	tig0045211:759-778	Msa1465390:intergenic	25.0%
!	AAAATGTTATTCAACAACCA+AGG	-	tig0045211:1377-1396	Msa1465390:intergenic	25.0%
!!	TTGGTTGTTGAATAACATTT+TGG	+	tig0045211:1376-1395	Msa1465390:intron	25.0%
!	AAAAAGTAAAGGAAGAAAGT+GGG	-	tig0045211:1532-1551	Msa1465390:intergenic	25.0%
!	AACAATCAATACGAATTACA+AGG	-	tig0045211:1997-2016	Msa1465390:intergenic	25.0%
!	TGGACATAATTAGTGAAATT+AGG	-	tig0045211:2020-2039	Msa1465390:intergenic	25.0%
!!	GTTATTAATTTTAAGCAACG+GGG	-	tig0045211:2056-2075	Msa1465390:intergenic	25.0%
!!	GGTTATTAATTTTAAGCAAC+GGG	-	tig0045211:2057-2076	Msa1465390:intergenic	25.0%
!	ATTACAAACTTATGAGTTGT+TGG	+	tig0045211:2080-2099	Msa1465390:three_prime_UTR	25.0%
!!	CTTTCTGAAGAAGAAATTAT+AGG	+	tig0045211:305-324	Msa1465390:CDS	25.0%
!	ATATTCAAACATTACGCTAT+TGG	-	tig0045211:522-541	Msa1465390:intergenic	25.0%
!	ATTAATTACAAGAATCAGTC+AGG	-	tig0045211:759-778	Msa1465390:intergenic	25.0%
!	AAAATGTTATTCAACAACCA+AGG	-	tig0045211:1377-1396	Msa1465390:intergenic	25.0%
!!	TTGGTTGTTGAATAACATTT+TGG	+	tig0045211:1376-1395	Msa1465390:intron	25.0%
!	AAAAAGTAAAGGAAGAAAGT+GGG	-	tig0045211:1532-1551	Msa1465390:intergenic	25.0%
!	AACAATCAATACGAATTACA+AGG	-	tig0045211:1997-2016	Msa1465390:intergenic	25.0%
!	TGGACATAATTAGTGAAATT+AGG	-	tig0045211:2020-2039	Msa1465390:intergenic	25.0%
!!	GTTATTAATTTTAAGCAACG+GGG	-	tig0045211:2056-2075	Msa1465390:intergenic	25.0%
!!	GGTTATTAATTTTAAGCAAC+GGG	-	tig0045211:2057-2076	Msa1465390:intergenic	25.0%
!	ATTACAAACTTATGAGTTGT+TGG	+	tig0045211:2080-2099	Msa1465390:three_prime_UTR	25.0%
	AGAAGAAATTATAGGCTTGA+AGG	+	tig0045211:313-332	Msa1465390:CDS	30.0%
	GAAGGAAATGTTTAAATCCA+TGG	+	tig0045211:331-350	Msa1465390:CDS	30.0%
	AAATCTTAGTACCTAGTTTG+GGG	-	tig0045211:406-425	Msa1465390:intergenic	30.0%
	GAAATCTTAGTACCTAGTTT+GGG	-	tig0045211:407-426	Msa1465390:intergenic	30.0%
	CAAACTAGGTACTAAGATTT+CGG	+	tig0045211:406-425	Msa1465390:CDS	30.0%
	AAACTGTAACGAAGAAGTAA+TGG	-	tig0045211:478-497	Msa1465390:intergenic	30.0%
	CTACGAAAATTAAATTCCAG+TGG	-	tig0045211:651-670	Msa1465390:intergenic	30.0%
	ATACAAATAATCACCAGGAA+GGG	-	tig0045211:730-749	Msa1465390:intergenic	30.0%
	TTTGGATACAAATAATCACC+AGG	-	tig0045211:735-754	Msa1465390:intergenic	30.0%
	TGTAATTAATGTAACTGGTG+AGG	+	tig0045211:769-788	Msa1465390:intron	30.0%
!	ATTCAAAAGCTTTGTATAGG+TGG	-	tig0045211:1073-1092	Msa1465390:intergenic	30.0%
	AATGAATCCCACATAAGTAA+TGG	+	tig0045211:1223-1242	Msa1465390:intron	30.0%
	TGTAATGTACCTATGAAAAC+AGG	-	tig0045211:1416-1435	Msa1465390:intergenic	30.0%
	GTACATTACAAAAGAAGAGT+TGG	+	tig0045211:1426-1445	Msa1465390:CDS	30.0%
	GAAAAAGTAAAGGAAGAAAG+TGG	-	tig0045211:1533-1552	Msa1465390:intergenic	30.0%
!!!	CTTTACTTTTTCCTTTGTCT+CGG	+	tig0045211:1541-1560	Msa1465390:intron	30.0%
!!	TTACAATTTTGTTTCAGGAC+TGG	-	tig0045211:1604-1623	Msa1465390:intergenic	30.0%
	TAATTATTTGCGACGTTTGT+TGG	-	tig0045211:1742-1761	Msa1465390:intergenic	30.0%
	CTAACTGTGACACTATAAAA+TGG	-	tig0045211:2154-2173	Msa1465390:intergenic	30.0%
	AGAAGAAATTATAGGCTTGA+AGG	+	tig0045211:313-332	Msa1465390:CDS	30.0%
	GAAGGAAATGTTTAAATCCA+TGG	+	tig0045211:331-350	Msa1465390:CDS	30.0%
	AAATCTTAGTACCTAGTTTG+GGG	-	tig0045211:406-425	Msa1465390:intergenic	30.0%
	GAAATCTTAGTACCTAGTTT+GGG	-	tig0045211:407-426	Msa1465390:intergenic	30.0%
	CAAACTAGGTACTAAGATTT+CGG	+	tig0045211:406-425	Msa1465390:CDS	30.0%
	AAACTGTAACGAAGAAGTAA+TGG	-	tig0045211:478-497	Msa1465390:intergenic	30.0%
	CTACGAAAATTAAATTCCAG+TGG	-	tig0045211:651-670	Msa1465390:intergenic	30.0%
	ATACAAATAATCACCAGGAA+GGG	-	tig0045211:730-749	Msa1465390:intergenic	30.0%
	TTTGGATACAAATAATCACC+AGG	-	tig0045211:735-754	Msa1465390:intergenic	30.0%
	TGTAATTAATGTAACTGGTG+AGG	+	tig0045211:769-788	Msa1465390:intron	30.0%
!	ATTCAAAAGCTTTGTATAGG+TGG	-	tig0045211:1073-1092	Msa1465390:intergenic	30.0%
	AATGAATCCCACATAAGTAA+TGG	+	tig0045211:1223-1242	Msa1465390:intron	30.0%
	TGTAATGTACCTATGAAAAC+AGG	-	tig0045211:1416-1435	Msa1465390:intergenic	30.0%
	GTACATTACAAAAGAAGAGT+TGG	+	tig0045211:1426-1445	Msa1465390:CDS	30.0%
	GAAAAAGTAAAGGAAGAAAG+TGG	-	tig0045211:1533-1552	Msa1465390:intergenic	30.0%
!!!	CTTTACTTTTTCCTTTGTCT+CGG	+	tig0045211:1541-1560	Msa1465390:intron	30.0%
!!	TTACAATTTTGTTTCAGGAC+TGG	-	tig0045211:1604-1623	Msa1465390:intergenic	30.0%
	TAATTATTTGCGACGTTTGT+TGG	-	tig0045211:1742-1761	Msa1465390:intergenic	30.0%
	CTAACTGTGACACTATAAAA+TGG	-	tig0045211:2154-2173	Msa1465390:intergenic	30.0%
!!	ACTTTTGAAGAGTTGAAAGC+TGG	+	tig0045211:377-396	Msa1465390:CDS	35.0%
	CGAAATCTTAGTACCTAGTT+TGG	-	tig0045211:408-427	Msa1465390:intergenic	35.0%
!	CAGGTACTGTTAGTATAGAT+GGG	-	tig0045211:604-623	Msa1465390:intergenic	35.0%
	TCTGCATATGTCACATGTAT+CGG	+	tig0045211:678-697	Msa1465390:intron	35.0%
	TACAAATAATCACCAGGAAG+GGG	-	tig0045211:729-748	Msa1465390:intergenic	35.0%
	GATACAAATAATCACCAGGA+AGG	-	tig0045211:731-750	Msa1465390:intergenic	35.0%
	TACAAGAATCAGTCAGGATT+TGG	-	tig0045211:753-772	Msa1465390:intergenic	35.0%
	TTCTATAAATGCAGCACATC+AGG	-	tig0045211:795-814	Msa1465390:intergenic	35.0%
	ATCAAGAGAAGTGGTAAACT+TGG	-	tig0045211:915-934	Msa1465390:intergenic	35.0%
	ATCAGTGAAATCAAGAGAAG+TGG	-	tig0045211:924-943	Msa1465390:intergenic	35.0%
	TACCATGCACTTGAATAGAA+TGG	+	tig0045211:1037-1056	Msa1465390:CDS	35.0%
	TTCCATTCTATTCAAGTGCA+TGG	-	tig0045211:1042-1061	Msa1465390:intergenic	35.0%
	CTTGAATAGAATGGAAAGAG+AGG	+	tig0045211:1046-1065	Msa1465390:CDS	35.0%
!!!	TATTTTGACAACGACAAGAG+CGG	+	tig0045211:1092-1111	Msa1465390:CDS	35.0%
!	CCTTTTCTCATTCATATAGC+AGG	-	tig0045211:1189-1208	Msa1465390:intergenic	35.0%
	CCTGCTATATGAATGAGAAA+AGG	+	tig0045211:1186-1205	Msa1465390:intron	35.0%
	AGGCACTAGAATATTAAGAC+CGG	-	tig0045211:1249-1268	Msa1465390:intergenic	35.0%
	TGTTACTAACTAGCGTGAAA+AGG	-	tig0045211:1292-1311	Msa1465390:intergenic	35.0%
	TTAGTAACATGAGAGGATCT+TGG	+	tig0045211:1303-1322	Msa1465390:intron	35.0%
	TTTACACACCTGTATTACCT+TGG	+	tig0045211:1357-1376	Msa1465390:intron	35.0%
	TTCAACAACCAAGGTAATAC+AGG	-	tig0045211:1368-1387	Msa1465390:intergenic	35.0%
!	TTTCTTGCTCCTGTTTTCAT+AGG	+	tig0045211:1404-1423	Msa1465390:intron	35.0%
	ACCCATGTTGTACTTTGTAA+GGG	-	tig0045211:1458-1477	Msa1465390:intergenic	35.0%
	GGGTGATGAGAAAACAATAA+AGG	+	tig0045211:1474-1493	Msa1465390:CDS	35.0%
	CGAGACAAAGGAAAAAGTAA+AGG	-	tig0045211:1543-1562	Msa1465390:intergenic	35.0%
	GGATGGAAGAATTAACTATG+AGG	+	tig0045211:1674-1693	Msa1465390:intron	35.0%
	TAGCAAATAGCAAGCAAAGA+AGG	-	tig0045211:1895-1914	Msa1465390:intergenic	35.0%
!!	TTCTTTGCTTGCTATTTGCT+AGG	+	tig0045211:1894-1913	Msa1465390:intron	35.0%
!	AACTTATGAGTTGTTGGTCT+TGG	+	tig0045211:2086-2105	Msa1465390:three_prime_UTR	35.0%
	AGTTATCACTTACCCAACTA+AGG	-	tig0045211:2116-2135	Msa1465390:intergenic	35.0%
!	ACGATTTGTAGCTTTACAAC+AGG	-	tig0045211:2179-2198	Msa1465390:intergenic	35.0%
!!!	TCGTCGTTTCCTTATTTTCA+CGG	+	tig0045211:2195-2214	Msa1465390:three_prime_UTR	35.0%
	GTATTCTTGCCGTGAAAATA+AGG	-	tig0045211:2207-2226	Msa1465390:intergenic	35.0%
!!	ACTTTTGAAGAGTTGAAAGC+TGG	+	tig0045211:377-396	Msa1465390:CDS	35.0%
	CGAAATCTTAGTACCTAGTT+TGG	-	tig0045211:408-427	Msa1465390:intergenic	35.0%
!	CAGGTACTGTTAGTATAGAT+GGG	-	tig0045211:604-623	Msa1465390:intergenic	35.0%
	TCTGCATATGTCACATGTAT+CGG	+	tig0045211:678-697	Msa1465390:intron	35.0%
	TACAAATAATCACCAGGAAG+GGG	-	tig0045211:729-748	Msa1465390:intergenic	35.0%
	GATACAAATAATCACCAGGA+AGG	-	tig0045211:731-750	Msa1465390:intergenic	35.0%
	TACAAGAATCAGTCAGGATT+TGG	-	tig0045211:753-772	Msa1465390:intergenic	35.0%
	TTCTATAAATGCAGCACATC+AGG	-	tig0045211:795-814	Msa1465390:intergenic	35.0%
	ATCAAGAGAAGTGGTAAACT+TGG	-	tig0045211:915-934	Msa1465390:intergenic	35.0%
	ATCAGTGAAATCAAGAGAAG+TGG	-	tig0045211:924-943	Msa1465390:intergenic	35.0%
	TACCATGCACTTGAATAGAA+TGG	+	tig0045211:1037-1056	Msa1465390:CDS	35.0%
	TTCCATTCTATTCAAGTGCA+TGG	-	tig0045211:1042-1061	Msa1465390:intergenic	35.0%
	CTTGAATAGAATGGAAAGAG+AGG	+	tig0045211:1046-1065	Msa1465390:CDS	35.0%
!!!	TATTTTGACAACGACAAGAG+CGG	+	tig0045211:1092-1111	Msa1465390:CDS	35.0%
!	CCTTTTCTCATTCATATAGC+AGG	-	tig0045211:1189-1208	Msa1465390:intergenic	35.0%
	CCTGCTATATGAATGAGAAA+AGG	+	tig0045211:1186-1205	Msa1465390:intron	35.0%
	AGGCACTAGAATATTAAGAC+CGG	-	tig0045211:1249-1268	Msa1465390:intergenic	35.0%
	TGTTACTAACTAGCGTGAAA+AGG	-	tig0045211:1292-1311	Msa1465390:intergenic	35.0%
	TTAGTAACATGAGAGGATCT+TGG	+	tig0045211:1303-1322	Msa1465390:intron	35.0%
	TTTACACACCTGTATTACCT+TGG	+	tig0045211:1357-1376	Msa1465390:intron	35.0%
	TTCAACAACCAAGGTAATAC+AGG	-	tig0045211:1368-1387	Msa1465390:intergenic	35.0%
!	TTTCTTGCTCCTGTTTTCAT+AGG	+	tig0045211:1404-1423	Msa1465390:intron	35.0%
	ACCCATGTTGTACTTTGTAA+GGG	-	tig0045211:1458-1477	Msa1465390:intergenic	35.0%
	GGGTGATGAGAAAACAATAA+AGG	+	tig0045211:1474-1493	Msa1465390:CDS	35.0%
	CGAGACAAAGGAAAAAGTAA+AGG	-	tig0045211:1543-1562	Msa1465390:intergenic	35.0%
	GGATGGAAGAATTAACTATG+AGG	+	tig0045211:1674-1693	Msa1465390:intron	35.0%
	TAGCAAATAGCAAGCAAAGA+AGG	-	tig0045211:1895-1914	Msa1465390:intergenic	35.0%
!!	TTCTTTGCTTGCTATTTGCT+AGG	+	tig0045211:1894-1913	Msa1465390:intron	35.0%
!	AACTTATGAGTTGTTGGTCT+TGG	+	tig0045211:2086-2105	Msa1465390:three_prime_UTR	35.0%
	AGTTATCACTTACCCAACTA+AGG	-	tig0045211:2116-2135	Msa1465390:intergenic	35.0%
!	ACGATTTGTAGCTTTACAAC+AGG	-	tig0045211:2179-2198	Msa1465390:intergenic	35.0%
!!!	TCGTCGTTTCCTTATTTTCA+CGG	+	tig0045211:2195-2214	Msa1465390:three_prime_UTR	35.0%
	GTATTCTTGCCGTGAAAATA+AGG	-	tig0045211:2207-2226	Msa1465390:intergenic	35.0%
	TCCATGGATACAGATAACAG+TGG	+	tig0045211:347-366	Msa1465390:CDS	40.0%
	TCCACTGTTATCTGTATCCA+TGG	-	tig0045211:351-370	Msa1465390:intergenic	40.0%
!	AGATTTCGGAGTCTGAAGTA+AGG	+	tig0045211:420-439	Msa1465390:CDS	40.0%
!	GCAGGTACTGTTAGTATAGA+TGG	-	tig0045211:605-624	Msa1465390:intergenic	40.0%
!	CCACAAAAGTATAACTCTGC+AGG	-	tig0045211:623-642	Msa1465390:intergenic	40.0%
!	CCTGCAGAGTTATACTTTTG+TGG	+	tig0045211:620-639	Msa1465390:intron	40.0%
!	TACTTTTGTGGCTTAACCAC+TGG	+	tig0045211:632-651	Msa1465390:intron	40.0%
!	CATATACGTATTAGGGTGCT+AGG	+	tig0045211:845-864	Msa1465390:intron	40.0%
	TATTTGCAGGCTGATGTTGA+CGG	+	tig0045211:978-997	Msa1465390:intron	40.0%
!!	ATTTTGACAACGACAAGAGC+GGG	+	tig0045211:1093-1112	Msa1465390:CDS	40.0%
!	AGAGCGGGTAATCTCTTTTT+AGG	+	tig0045211:1108-1127	Msa1465390:intron	40.0%
	AATCCCACATAAGTAATGGC+CGG	+	tig0045211:1227-1246	Msa1465390:intron	40.0%
	TTATGTCTGTGTGGTGAGAA+AGG	-	tig0045211:1269-1288	Msa1465390:intergenic	40.0%
	GTGAAAAGGTTATGTCTGTG+TGG	-	tig0045211:1278-1297	Msa1465390:intergenic	40.0%
	ACGCTAGTTAGTAACATGAG+AGG	+	tig0045211:1296-1315	Msa1465390:intron	40.0%
	TGCCCTTACAAAGTACAACA+TGG	+	tig0045211:1453-1472	Msa1465390:CDS	40.0%
	GCCCTTACAAAGTACAACAT+GGG	+	tig0045211:1454-1473	Msa1465390:CDS	40.0%
	CACCCATGTTGTACTTTGTA+AGG	-	tig0045211:1459-1478	Msa1465390:intergenic	40.0%
	TCAGGACTGGATAACTATCA+AGG	-	tig0045211:1591-1610	Msa1465390:intergenic	40.0%
	TTCCATCCTGCAAGAGATTT+CGG	-	tig0045211:1662-1681	Msa1465390:intergenic	40.0%
	TTTGTAGCCATGATGAGGAA+AGG	+	tig0045211:1699-1718	Msa1465390:CDS	40.0%
!	CGTTTGTTGGTTATCAAGTC+TGG	-	tig0045211:1729-1748	Msa1465390:intergenic	40.0%
	TCAGGCATGTTTCACTAACA+TGG	+	tig0045211:1808-1827	Msa1465390:intron	40.0%
	TAGAGAGAAAATTGTCTCGC+GGG	-	tig0045211:1949-1968	Msa1465390:intergenic	40.0%
	GTAGAGAGAAAATTGTCTCG+CGG	-	tig0045211:1950-1969	Msa1465390:intergenic	40.0%
	TCCATGGATACAGATAACAG+TGG	+	tig0045211:347-366	Msa1465390:CDS	40.0%
	TCCACTGTTATCTGTATCCA+TGG	-	tig0045211:351-370	Msa1465390:intergenic	40.0%
!	AGATTTCGGAGTCTGAAGTA+AGG	+	tig0045211:420-439	Msa1465390:CDS	40.0%
!	GCAGGTACTGTTAGTATAGA+TGG	-	tig0045211:605-624	Msa1465390:intergenic	40.0%
!	CCACAAAAGTATAACTCTGC+AGG	-	tig0045211:623-642	Msa1465390:intergenic	40.0%
!	CCTGCAGAGTTATACTTTTG+TGG	+	tig0045211:620-639	Msa1465390:intron	40.0%
!	TACTTTTGTGGCTTAACCAC+TGG	+	tig0045211:632-651	Msa1465390:intron	40.0%
!	CATATACGTATTAGGGTGCT+AGG	+	tig0045211:845-864	Msa1465390:intron	40.0%
	TATTTGCAGGCTGATGTTGA+CGG	+	tig0045211:978-997	Msa1465390:intron	40.0%
!!	ATTTTGACAACGACAAGAGC+GGG	+	tig0045211:1093-1112	Msa1465390:CDS	40.0%
!	AGAGCGGGTAATCTCTTTTT+AGG	+	tig0045211:1108-1127	Msa1465390:intron	40.0%
	AATCCCACATAAGTAATGGC+CGG	+	tig0045211:1227-1246	Msa1465390:intron	40.0%
	TTATGTCTGTGTGGTGAGAA+AGG	-	tig0045211:1269-1288	Msa1465390:intergenic	40.0%
	GTGAAAAGGTTATGTCTGTG+TGG	-	tig0045211:1278-1297	Msa1465390:intergenic	40.0%
	ACGCTAGTTAGTAACATGAG+AGG	+	tig0045211:1296-1315	Msa1465390:intron	40.0%
	TGCCCTTACAAAGTACAACA+TGG	+	tig0045211:1453-1472	Msa1465390:CDS	40.0%
	GCCCTTACAAAGTACAACAT+GGG	+	tig0045211:1454-1473	Msa1465390:CDS	40.0%
	CACCCATGTTGTACTTTGTA+AGG	-	tig0045211:1459-1478	Msa1465390:intergenic	40.0%
	TCAGGACTGGATAACTATCA+AGG	-	tig0045211:1591-1610	Msa1465390:intergenic	40.0%
	TTCCATCCTGCAAGAGATTT+CGG	-	tig0045211:1662-1681	Msa1465390:intergenic	40.0%
	TTTGTAGCCATGATGAGGAA+AGG	+	tig0045211:1699-1718	Msa1465390:CDS	40.0%
!	CGTTTGTTGGTTATCAAGTC+TGG	-	tig0045211:1729-1748	Msa1465390:intergenic	40.0%
	TCAGGCATGTTTCACTAACA+TGG	+	tig0045211:1808-1827	Msa1465390:intron	40.0%
	TAGAGAGAAAATTGTCTCGC+GGG	-	tig0045211:1949-1968	Msa1465390:intergenic	40.0%
	GTAGAGAGAAAATTGTCTCG+CGG	-	tig0045211:1950-1969	Msa1465390:intergenic	40.0%
!	GTCTGAAGTAAGGCAGTTGA+TGG	+	tig0045211:430-449	Msa1465390:CDS	45.0%
!!	AGTAAGGCAGTTGATGGAAG+CGG	+	tig0045211:436-455	Msa1465390:CDS	45.0%
	AGACCGGCCATTACTTATGT+GGG	-	tig0045211:1233-1252	Msa1465390:intergenic	45.0%
	AAGACCGGCCATTACTTATG+TGG	-	tig0045211:1234-1253	Msa1465390:intergenic	45.0%
	GAACGAAAATAAGACCCGAG+AGG	-	tig0045211:1567-1586	Msa1465390:intergenic	45.0%
	TTGCATCCGAAATCTCTTGC+AGG	+	tig0045211:1653-1672	Msa1465390:intron	45.0%
	ATCCGAAATCTCTTGCAGGA+TGG	+	tig0045211:1657-1676	Msa1465390:intron	45.0%
	AGGAGTTTGTAGCCATGATG+AGG	+	tig0045211:1694-1713	Msa1465390:CDS	45.0%
	TGGATTGCCTTTCCTCATCA+TGG	-	tig0045211:1709-1728	Msa1465390:intergenic	45.0%
	CATACATCGCCTGTTTCACT+GGG	+	tig0045211:1769-1788	Msa1465390:three_prime_UTR	45.0%
	AATAGTCTGTCAGTGAGAGC+TGG	-	tig0045211:1863-1882	Msa1465390:intergenic	45.0%
!	GTCTGAAGTAAGGCAGTTGA+TGG	+	tig0045211:430-449	Msa1465390:CDS	45.0%
!!	AGTAAGGCAGTTGATGGAAG+CGG	+	tig0045211:436-455	Msa1465390:CDS	45.0%
	AGACCGGCCATTACTTATGT+GGG	-	tig0045211:1233-1252	Msa1465390:intergenic	45.0%
	AAGACCGGCCATTACTTATG+TGG	-	tig0045211:1234-1253	Msa1465390:intergenic	45.0%
	GAACGAAAATAAGACCCGAG+AGG	-	tig0045211:1567-1586	Msa1465390:intergenic	45.0%
	TTGCATCCGAAATCTCTTGC+AGG	+	tig0045211:1653-1672	Msa1465390:intron	45.0%
	ATCCGAAATCTCTTGCAGGA+TGG	+	tig0045211:1657-1676	Msa1465390:intron	45.0%
	AGGAGTTTGTAGCCATGATG+AGG	+	tig0045211:1694-1713	Msa1465390:CDS	45.0%
	TGGATTGCCTTTCCTCATCA+TGG	-	tig0045211:1709-1728	Msa1465390:intergenic	45.0%
	CATACATCGCCTGTTTCACT+GGG	+	tig0045211:1769-1788	Msa1465390:three_prime_UTR	45.0%
	AATAGTCTGTCAGTGAGAGC+TGG	-	tig0045211:1863-1882	Msa1465390:intergenic	45.0%
!	AAAGCTGGTCTCCCCAAACT+AGG	+	tig0045211:392-411	Msa1465390:CDS	50.0%
	CAGGCTGATGTTGACGGAAA+TGG	+	tig0045211:984-1003	Msa1465390:intron	50.0%
	TTTCCTTTGTCTCGGCCTCT+CGG	+	tig0045211:1549-1568	Msa1465390:intron	50.0%
	CCAGTGAAACAGGCGATGTA+TGG	-	tig0045211:1771-1790	Msa1465390:intergenic	50.0%
	CCATACATCGCCTGTTTCAC+TGG	+	tig0045211:1768-1787	Msa1465390:three_prime_UTR	50.0%
	ATCGCCTGTTTCACTGGGTT+CGG	+	tig0045211:1774-1793	Msa1465390:three_prime_UTR	50.0%
	GCTAGGACACTTGCATTGCA+TGG	+	tig0045211:1911-1930	Msa1465390:intron	50.0%
	AACGGGGCAACGATTTGTGA+TGG	-	tig0045211:2040-2059	Msa1465390:intergenic	50.0%
!	AAAGCTGGTCTCCCCAAACT+AGG	+	tig0045211:392-411	Msa1465390:CDS	50.0%
	CAGGCTGATGTTGACGGAAA+TGG	+	tig0045211:984-1003	Msa1465390:intron	50.0%
	TTTCCTTTGTCTCGGCCTCT+CGG	+	tig0045211:1549-1568	Msa1465390:intron	50.0%
	CCAGTGAAACAGGCGATGTA+TGG	-	tig0045211:1771-1790	Msa1465390:intergenic	50.0%
	CCATACATCGCCTGTTTCAC+TGG	+	tig0045211:1768-1787	Msa1465390:three_prime_UTR	50.0%
	ATCGCCTGTTTCACTGGGTT+CGG	+	tig0045211:1774-1793	Msa1465390:three_prime_UTR	50.0%
	GCTAGGACACTTGCATTGCA+TGG	+	tig0045211:1911-1930	Msa1465390:intron	50.0%
	AACGGGGCAACGATTTGTGA+TGG	-	tig0045211:2040-2059	Msa1465390:intergenic	50.0%
	TTCCTTTGTCTCGGCCTCTC+GGG	+	tig0045211:1550-1569	Msa1465390:intron	55.0%
!	TGGTCTTGGCACGCCTTAGT+TGG	+	tig0045211:2100-2119	Msa1465390:three_prime_UTR	55.0%
	GGTCTTGGCACGCCTTAGTT+GGG	+	tig0045211:2101-2120	Msa1465390:three_prime_UTR	55.0%
	TTCCTTTGTCTCGGCCTCTC+GGG	+	tig0045211:1550-1569	Msa1465390:intron	55.0%
!	TGGTCTTGGCACGCCTTAGT+TGG	+	tig0045211:2100-2119	Msa1465390:three_prime_UTR	55.0%
	GGTCTTGGCACGCCTTAGTT+GGG	+	tig0045211:2101-2120	Msa1465390:three_prime_UTR	55.0%
	CTGCAAGTTCGTCCCCTTCC+TGG	+	tig0045211:714-733	Msa1465390:intron	60.0%
	GCCTGTTTCACTGGGTTCGG+AGG	+	tig0045211:1777-1796	Msa1465390:three_prime_UTR	60.0%
	GCCTCCGAACCCAGTGAAAC+AGG	-	tig0045211:1781-1800	Msa1465390:intergenic	60.0%
	GGTTCGGAGGCAGAAGACTC+AGG	+	tig0045211:1790-1809	Msa1465390:three_prime_UTR	60.0%
	CTGCAAGTTCGTCCCCTTCC+TGG	+	tig0045211:714-733	Msa1465390:intron	60.0%
	GCCTGTTTCACTGGGTTCGG+AGG	+	tig0045211:1777-1796	Msa1465390:three_prime_UTR	60.0%
	GCCTCCGAACCCAGTGAAAC+AGG	-	tig0045211:1781-1800	Msa1465390:intergenic	60.0%
	GGTTCGGAGGCAGAAGACTC+AGG	+	tig0045211:1790-1809	Msa1465390:three_prime_UTR	60.0%
	GACCCGAGAGGCCGAGACAA+AGG	-	tig0045211:1555-1574	Msa1465390:intergenic	65.0%
	GACCCGAGAGGCCGAGACAA+AGG	-	tig0045211:1555-1574	Msa1465390:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0045211	gene	290	2227	290	ID=Msa1465390;Name=Msa1465390
tig0045211	mRNA	290	2227	290	ID=Msa1465390-mRNA-1;Parent=Msa1465390;Name=Msa1465390-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0\|1\|0.8\|1\|0.75\|0.6\|5\|365\|159
tig0045211	exon	290	457	290	ID=Msa1465390-mRNA-1:exon:24783;Parent=Msa1465390-mRNA-1
tig0045211	exon	987	1114	987	ID=Msa1465390-mRNA-1:exon:24784;Parent=Msa1465390-mRNA-1
tig0045211	exon	1426	1525	1426	ID=Msa1465390-mRNA-1:exon:24785;Parent=Msa1465390-mRNA-1
tig0045211	exon	1675	1811	1675	ID=Msa1465390-mRNA-1:exon:24786;Parent=Msa1465390-mRNA-1
tig0045211	exon	1916	2227	1916	ID=Msa1465390-mRNA-1:exon:24787;Parent=Msa1465390-mRNA-1
tig0045211	CDS	290	457	290	ID=Msa1465390-mRNA-1:cds;Parent=Msa1465390-mRNA-1
tig0045211	CDS	987	1114	987	ID=Msa1465390-mRNA-1:cds;Parent=Msa1465390-mRNA-1
tig0045211	CDS	1426	1525	1426	ID=Msa1465390-mRNA-1:cds;Parent=Msa1465390-mRNA-1
tig0045211	CDS	1675	1758	1675	ID=Msa1465390-mRNA-1:cds;Parent=Msa1465390-mRNA-1
tig0045211	three_prime_UTR	1759	1811	1759	ID=Msa1465390-mRNA-1:three_prime_utr;Parent=Msa1465390-mRNA-1
tig0045211	three_prime_UTR	1916	2227	1916	ID=Msa1465390-mRNA-1:three_prime_utr;Parent=Msa1465390-mRNA-1

Gene Sequence

>Msa1465390

GTTATTGCTGAAAATCTTTCTGAAGAAGAAATTATAGGCTTGAAGGAAATGTTTAAATCCATGGATACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTAGGTACTAAGATTTCGGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTTGACGGAAATGGAACCATTGATTATATTGAATTTATAACAGCTACCATGCACTTGAATAGAATGGAAAGAGAGGACCACCTATACAAAGCTTTTGAATATTTTGACAACGACAAGAGCGGGTACATTACAAAAGAAGAGTTGGAATCTGCCCTTACAAAGTACAACATGGGTGATGAGAAAACAATAAAGGAGATTATTGACGAAGTTGATTCAGACAATGATGGAAGAATTAACTATGAGGAGTTTGTAGCCATGATGAGGAAAGGCAATCCAGACTTGATAACCAACAAACGTCGCAAATAA

Protein sequence

>Msa1465390

VIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKISESEVRQLMEAADVDGNGTIDYIEFITATMHLNRMEREDHLYKAFEYFDNDKSGYITKEELESALTKYNMGDEKTIKEIIDEVDSDNDGRINYEEFVAMMRKGNPDLITNKRRK*