AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1419690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419690 MtrunA17_Chr4g0062611 95.812 382 7 1 3 375 89 470 0.0 747
Msa1419690 MtrunA17_Chr8g0372751 83.475 236 25 4 149 375 14 244 3.60e-128 368
Msa1419690 MtrunA17_Chr8g0372771 93.671 79 5 0 3 81 89 167 5.28e-41 142
Msa1419690 MtrunA17_Chr8g0372761 90.769 65 3 1 82 146 16 77 4.54e-35 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419690 AT1G03280.3 55.291 378 126 14 3 356 100 458 3.02e-120 357
Msa1419690 AT1G03280.2 55.291 378 126 14 3 356 100 458 3.02e-120 357
Msa1419690 AT1G03280.1 55.291 378 126 14 3 356 100 458 3.02e-120 357
Msa1419690 AT4G20340.3 50.806 372 147 12 3 356 45 398 1.68e-103 311
Msa1419690 AT4G20340.2 50.538 372 148 11 3 356 100 453 6.17e-103 312
Msa1419690 AT4G20340.1 50.538 372 148 11 3 356 100 453 6.17e-103 312
Msa1419690 AT4G20810.1 46.429 364 157 15 18 374 83 415 7.75e-92 282

Find 113 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGACGGTACATCTTTAA+AGG 0.182546 tig0024723:+4608 Msa1419690:CDS
GACTTGCCTGTTCCAGAATT+TGG 0.189652 tig0024723:+2371 Msa1419690:CDS
ATCTGCTGCGTTCGCATCTT+GGG 0.226916 tig0024723:-5002 None:intergenic
TCGTCCTCGTCGTCTTCTTC+TGG 0.291126 tig0024723:-6878 None:intergenic
GCTTGAAGACTACCAAATTC+TGG 0.326095 tig0024723:-2383 None:intergenic
AAATCTCATCTGGGATATAA+TGG 0.332016 tig0024723:+2467 Msa1419690:CDS
ACGACGGCGTGAAAAGTTAA+AGG 0.370019 tig0024723:+885 Msa1419690:CDS
TGGTGATTCTAAATCTCATC+TGG 0.375711 tig0024723:+2457 Msa1419690:CDS
CATTATTACTTACCAATGAA+TGG 0.376022 tig0024723:+7243 Msa1419690:three_prime_UTR
TGGGAAGAGGCTCCTGTTAG+AGG 0.378747 tig0024723:+5100 Msa1419690:CDS
GAAGCCCGAGCTAGTGCAGC+TGG 0.384987 tig0024723:+2410 Msa1419690:CDS
AGAGAACAAGAACACCATTC+AGG 0.401351 tig0024723:+566 Msa1419690:CDS
CACGCCCAGCTGCACTAGCT+CGG 0.403153 tig0024723:-2415 None:intergenic
TATGATGAAAAGTTGAAAAC+TGG 0.406627 tig0024723:-7137 None:intergenic
GCTTAAGAAGCAACGCGAAT+TGG 0.412214 tig0024723:+4961 Msa1419690:CDS
TTATTTCAGATACAATGCTT+TGG 0.415674 tig0024723:+726 Msa1419690:intron
GGCTGAAGTGTACCTCTAAC+AGG 0.418995 tig0024723:-5112 None:intergenic
GCAGCTGGGCGTGCAGCTAA+TGG 0.419366 tig0024723:+2425 Msa1419690:CDS
AGTTTCAAAGTAGGGTTGTC+TGG 0.422007 tig0024723:-7170 None:intergenic
GCTGATGAAAATAATCATAA+TGG 0.435353 tig0024723:+6918 Msa1419690:exon
AAATCAAAGTATCCATTCAT+TGG 0.437907 tig0024723:-7255 None:intergenic
ATTTGGTAGTCTTCAAGCTT+GGG 0.444477 tig0024723:+2388 Msa1419690:CDS
GCGATACGTCCGTGGTTTGA+GGG 0.450666 tig0024723:+7084 Msa1419690:three_prime_UTR
ACGCCCAGCTGCACTAGCTC+GGG 0.452951 tig0024723:-2414 None:intergenic
TGGTAAGTAATAATGTGAAA+TGG 0.455938 tig0024723:-7235 None:intergenic
TAATAATGTGAAATGGAGTC+AGG 0.457500 tig0024723:-7228 None:intergenic
GGCGATACGTCCGTGGTTTG+AGG 0.461867 tig0024723:+7083 Msa1419690:three_prime_UTR
CGGTTGGAAGTACTGCTAGA+AGG 0.463810 tig0024723:-5028 None:intergenic
AGGAAAAGAGGGAGAAGAAA+AGG 0.464405 tig0024723:+262 Msa1419690:CDS
ATAAGTTAGCTGCTCAAGAC+GGG 0.467809 tig0024723:+827 Msa1419690:CDS
ATAACATACAGTTTCAAAGT+AGG 0.473041 tig0024723:-7179 None:intergenic
AATTTGGTAGTCTTCAAGCT+TGG 0.481156 tig0024723:+2387 Msa1419690:CDS
TTCCACTGTGAACGTTGTAA+TGG 0.482559 tig0024723:+784 Msa1419690:CDS
AGACTACCAAATTCTGGAAC+AGG 0.482675 tig0024723:-2377 None:intergenic
AAAGGACATGCTTCAGAAGA+TGG 0.491664 tig0024723:+903 Msa1419690:CDS
CCTCCATGGATGATTACATC+AGG 0.493168 tig0024723:+4636 Msa1419690:CDS
AAATGCAATTGGAGCTTACA+AGG 0.494474 tig0024723:+6826 Msa1419690:CDS
TGTACATATATATTCCTGAA+TGG 0.494787 tig0024723:-580 None:intergenic
ACAGCGTGGAGAGGTGAAGC+AGG 0.499690 tig0024723:+4677 Msa1419690:CDS
TATGTACAAACTGTGGCAAA+AGG 0.503511 tig0024723:+595 Msa1419690:CDS
TAACATACAGTTTCAAAGTA+GGG 0.505789 tig0024723:-7178 None:intergenic
TGAAGCTACGACAGGAAAAG+AGG 0.510943 tig0024723:+250 Msa1419690:CDS
ACCTTGGTATCTCCGCTGTA+TGG 0.515063 tig0024723:-2500 None:intergenic
AAACTGTATGTTATGATGAC+TGG 0.523465 tig0024723:+7188 Msa1419690:three_prime_UTR
GTCAGGATAACACTATTCTC+TGG 0.524559 tig0024723:-7211 None:intergenic
GTCTTCTTCTGGCTGAGCAT+CGG 0.526811 tig0024723:-6867 None:intergenic
GACGATATCGACTGGGAGGA+AGG 0.528222 tig0024723:+6896 Msa1419690:CDS
TACTTTGATTTGTGAATCGT+GGG 0.532977 tig0024723:+7267 Msa1419690:three_prime_UTR
TCTGCTGCGTTCGCATCTTG+GGG 0.534141 tig0024723:-5001 None:intergenic
CGACTGACTTGATCTACTAA+AGG 0.542394 tig0024723:-2341 None:intergenic
TGATGGTACCGAGTGGGAAG+AGG 0.544924 tig0024723:+5087 Msa1419690:CDS
ATTGATGTGTGCAACACCAT+AGG 0.547250 tig0024723:-7306 None:intergenic
ACGACGAGGACGATATCGAC+TGG 0.550692 tig0024723:+6888 Msa1419690:CDS
ATACCTGATGTAATCATCCA+TGG 0.551552 tig0024723:-4639 None:intergenic
TTGATTTCAAGCCAACTTGG+CGG 0.551942 tig0024723:-5048 None:intergenic
TTTCAAGCCAACTTGGCGGT+TGG 0.553993 tig0024723:-5044 None:intergenic
TTTAGTAGATCAAGTCAGTC+GGG 0.559290 tig0024723:+2343 Msa1419690:CDS
GTTGCCTGTGCATGTTGCTG+TGG 0.563342 tig0024723:+7062 Msa1419690:three_prime_UTR
CAGGTGGTAGTTGACTTCAA+TGG 0.563361 tig0024723:+4552 Msa1419690:intron
GATAAGTTAGCTGCTCAAGA+CGG 0.564672 tig0024723:+826 Msa1419690:CDS
TTTATAGGATGAGTATGTCA+AGG 0.564885 tig0024723:+4922 Msa1419690:intron
ATCGCCACAGCAACATGCAC+AGG 0.567440 tig0024723:-7066 None:intergenic
AGTACTTCCAACCGCCAAGT+TGG 0.569471 tig0024723:+5037 Msa1419690:CDS
TGCAGATATATGATGTGGTT+AGG 0.570661 tig0024723:+502 Msa1419690:intron
AACACCATAGGTAAAACGTT+GGG 0.571578 tig0024723:-7294 None:intergenic
AACAGGAGCCTCTTCCCACT+CGG 0.576584 tig0024723:-5095 None:intergenic
GTATCTCCGCTGTATGGCAA+TGG 0.577878 tig0024723:-2494 None:intergenic
AAGCCCGAGCTAGTGCAGCT+GGG 0.582139 tig0024723:+2411 Msa1419690:CDS
ATAGCTTATTCTGATCTGCT+AGG 0.584421 tig0024723:+6955 Msa1419690:three_prime_UTR
AAACGTGAGGAAGATGATGA+TGG 0.590028 tig0024723:+5070 Msa1419690:CDS
GTACACCTCCCCTCAAACCA+CGG 0.590420 tig0024723:-7093 None:intergenic
CTTTAGTAGATCAAGTCAGT+CGG 0.591765 tig0024723:+2342 Msa1419690:CDS
TACGTCCGTGGTTTGAGGGG+AGG 0.596022 tig0024723:+7088 Msa1419690:three_prime_UTR
CGATACGTCCGTGGTTTGAG+GGG 0.597896 tig0024723:+7085 Msa1419690:three_prime_UTR
GTTGACTTCAATGGTACTGA+AGG 0.599548 tig0024723:+4561 Msa1419690:CDS
GTGATTAACTTAAAAGTCAA+CGG 0.599785 tig0024723:-7115 None:intergenic
GGTACTGAAGGCAAAGGAGA+GGG 0.602003 tig0024723:+4573 Msa1419690:CDS
CAGCTAACTCCGGTCTTGTG+TGG 0.604001 tig0024723:-7028 None:intergenic
GTCTGTGAATTGCACTGATG+TGG 0.605194 tig0024723:-4727 None:intergenic
GGTGATTCTAAATCTCATCT+GGG 0.606736 tig0024723:+2458 Msa1419690:CDS
GAAGCTACGACAGGAAAAGA+GGG 0.609436 tig0024723:+251 Msa1419690:CDS
ATACTTTGATTTGTGAATCG+TGG 0.609449 tig0024723:+7266 Msa1419690:three_prime_UTR
AGATAATGAGCAGCTAACTC+CGG 0.611247 tig0024723:-7038 None:intergenic
AATTATGTACCACACAAGAC+CGG 0.612143 tig0024723:+7019 Msa1419690:three_prime_UTR
GCAGCTAATGGAGATAATGC+TGG 0.617199 tig0024723:+2437 Msa1419690:CDS
GCCATACAGCGGAGATACCA+AGG 0.618161 tig0024723:+2499 Msa1419690:CDS
CGACGAGGACGATATCGACT+GGG 0.621959 tig0024723:+6889 Msa1419690:CDS
CTGCTGTCTAGATTATGCAC+AGG 0.622608 tig0024723:+307 Msa1419690:CDS
GCTACAGCTGAAGCTACGAC+AGG 0.624340 tig0024723:+242 Msa1419690:CDS
AGATGATGATGGTACCGAGT+GGG 0.630560 tig0024723:+5081 Msa1419690:CDS
TTCAATGGTACTGAAGGCAA+AGG 0.631073 tig0024723:+4567 Msa1419690:CDS
TAAGTTAGCTGCTCAAGACG+GGG 0.634311 tig0024723:+828 Msa1419690:CDS
CCATAGGTAAAACGTTGGGA+TGG 0.636868 tig0024723:-7290 None:intergenic
TGGTACTGAAGGCAAAGGAG+AGG 0.643856 tig0024723:+4572 Msa1419690:CDS
ATGAGAATGCACGAAGACGA+CGG 0.644965 tig0024723:+869 Msa1419690:CDS
TACGAAAGAACAGCGTGGAG+AGG 0.645484 tig0024723:+4668 Msa1419690:CDS
TTTGTTGCAGATATATGATG+TGG 0.649334 tig0024723:+497 Msa1419690:intron
GAATATATATGTACAAACTG+TGG 0.654824 tig0024723:+588 Msa1419690:CDS
TGGCTTGAAATCAAAACGTG+AGG 0.659414 tig0024723:+5057 Msa1419690:CDS
CAACACCATAGGTAAAACGT+TGG 0.663096 tig0024723:-7295 None:intergenic
GGTGTTAAATCTGAAACTGA+CGG 0.664295 tig0024723:+4594 Msa1419690:CDS
TGCAATTGGAGCTTACAAGG+TGG 0.682571 tig0024723:+6829 Msa1419690:CDS
AAGTTAGCTGCTCAAGACGG+GGG 0.688054 tig0024723:+829 Msa1419690:CDS
GGACATGCTTCAGAAGATGG+AGG 0.689485 tig0024723:+906 Msa1419690:CDS
ACGTTGTAATGGAAAACTAG+AGG 0.692315 tig0024723:+795 Msa1419690:CDS
GGAGCACCATTGCCATACAG+CGG 0.718354 tig0024723:+2488 Msa1419690:CDS
AAGATGATGATGGTACCGAG+TGG 0.721118 tig0024723:+5080 Msa1419690:CDS
TTCCATTACAACGTTCACAG+TGG 0.729270 tig0024723:-786 None:intergenic
CGAGGACGATATCGACTGGG+AGG 0.742122 tig0024723:+6892 Msa1419690:CDS
CCTGATGTAATCATCCATGG+AGG 0.742710 tig0024723:-4636 None:intergenic
AATCTTACGAAAGAACAGCG+TGG 0.751641 tig0024723:+4663 Msa1419690:CDS
TCAGCCAGAAGAAGACGACG+AGG 0.751885 tig0024723:+6874 Msa1419690:CDS
ACAATGCTTTGGATGCACTG+CGG 0.757429 tig0024723:+737 Msa1419690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATTATATATTGCA+AGG - tig0024723:6033-6052 None:intergenic 10.0%
!!! TTTTTTGTATTGATGTATTT+TGG + tig0024723:679-698 Msa1419690:intron 15.0%
!! AAAAAGATAACAACAAAAAA+AGG + tig0024723:1394-1413 Msa1419690:intron 15.0%
!! TTTCTGGATTTAATAAAATT+GGG - tig0024723:3016-3035 None:intergenic 15.0%
!!! TTTTCTGGATTTAATAAAAT+TGG - tig0024723:3017-3036 None:intergenic 15.0%
!!! TTAACTTTATCTGTTTTAAA+TGG - tig0024723:3048-3067 None:intergenic 15.0%
!!! TAAATGGATTTTTTTAAAAC+CGG - tig0024723:3580-3599 None:intergenic 15.0%
!!! TTAACGTTTCATTATTTTTA+AGG - tig0024723:4510-4529 None:intergenic 15.0%
!!! GTTACCTTTTATATTTTTAT+AGG + tig0024723:4907-4926 Msa1419690:intron 15.0%
!! TCATCCTATAAAAATATAAA+AGG - tig0024723:4914-4933 None:intergenic 15.0%
!! TAACAATCTCAAAATTATAT+GGG - tig0024723:5366-5385 None:intergenic 15.0%
!! TACTTCTAATAATTTGAAAA+GGG - tig0024723:5730-5749 None:intergenic 15.0%
!! ATACTTCTAATAATTTGAAA+AGG - tig0024723:5731-5750 None:intergenic 15.0%
!! AAGTTAGTAATATTAATTAG+GGG - tig0024723:5777-5796 None:intergenic 15.0%
!! CAAGTTAGTAATATTAATTA+GGG - tig0024723:5778-5797 None:intergenic 15.0%
!! ACAAGTTAGTAATATTAATT+AGG - tig0024723:5779-5798 None:intergenic 15.0%
!!! TTTGGTTGATAATTTTATTT+GGG + tig0024723:6768-6787 Msa1419690:intron 15.0%
!! ATAAAACAACTGAATATCAT+TGG - tig0024723:372-391 None:intergenic 20.0%
!! TTCAGATAATTCAATTGAAT+TGG + tig0024723:431-450 Msa1419690:intron 20.0%
!! TGAATTTATCATACATATAG+AGG + tig0024723:1155-1174 Msa1419690:intron 20.0%
!! GGTTAGAATATCAAAATAAT+TGG - tig0024723:1282-1301 None:intergenic 20.0%
!!! TATCTTTTTTTAGTTGGTTT+TGG - tig0024723:1383-1402 None:intergenic 20.0%
!!! TGTTGTTATCTTTTTTTAGT+TGG - tig0024723:1389-1408 None:intergenic 20.0%
!!! TGGTAAGTTTAATTTTGAAA+TGG - tig0024723:1497-1516 None:intergenic 20.0%
!! ATAAAAGGAAACAATAAGAA+GGG + tig0024723:1638-1657 Msa1419690:intron 20.0%
!!! AGAAAATTGTTTCTATATGT+TGG + tig0024723:1715-1734 Msa1419690:intron 20.0%
!! AAACTGAATTAATGTAAAAG+AGG - tig0024723:1847-1866 None:intergenic 20.0%
!! ATTTCACGATTAAAATAATC+TGG + tig0024723:1893-1912 Msa1419690:intron 20.0%
!!! TAATACACAGTAAATTTTAC+TGG + tig0024723:1975-1994 Msa1419690:intron 20.0%
!! TTAGTAAAACTGTTAACTTT+GGG + tig0024723:2116-2135 Msa1419690:intron 20.0%
!! AAAATATATCATCCAAAATG+GGG - tig0024723:2854-2873 None:intergenic 20.0%
!! GAAAATATATCATCCAAAAT+GGG - tig0024723:2855-2874 None:intergenic 20.0%
!!! CTGAACTGATTTATAAAATT+TGG + tig0024723:2942-2961 Msa1419690:intron 20.0%
!!! AACTGATTTATAAAATTTGG+TGG + tig0024723:2945-2964 Msa1419690:intron 20.0%
!! AACTACTTTCACAAAATAAA+TGG - tig0024723:3596-3615 None:intergenic 20.0%
!!! GATATTGACAAATTTTGATA+AGG - tig0024723:3770-3789 None:intergenic 20.0%
!! ATGGAATCATTTCTATATAT+TGG + tig0024723:3952-3971 Msa1419690:intron 20.0%
!! ATCATTTCTATATATTGGAT+AGG + tig0024723:3957-3976 Msa1419690:intron 20.0%
!! ATCTTCTTAGAAAAAATAGT+TGG + tig0024723:4055-4074 Msa1419690:intron 20.0%
!! TCTTCTTAGAAAAAATAGTT+GGG + tig0024723:4056-4075 Msa1419690:intron 20.0%
!! CCTTATAGAAAACAATAAAA+GGG - tig0024723:4286-4305 None:intergenic 20.0%
!! TCCTTATAGAAAACAATAAA+AGG - tig0024723:4287-4306 None:intergenic 20.0%
!!! TTCTATTTAAGTTTCATTTC+TGG + tig0024723:4363-4382 Msa1419690:intron 20.0%
!! AAGTATTCTATTAATGAATG+TGG + tig0024723:4528-4547 Msa1419690:intron 20.0%
!! ACATGATGATAAAAATATAC+AGG + tig0024723:4770-4789 Msa1419690:intron 20.0%
!! TATTCTAGACTTATACTTTA+AGG - tig0024723:5168-5187 None:intergenic 20.0%
!! TGTCTTGTAATTTATTAGAT+GGG - tig0024723:5245-5264 None:intergenic 20.0%
!! TTGTCTTGTAATTTATTAGA+TGG - tig0024723:5246-5265 None:intergenic 20.0%
!! AAAATGGATACTATAATGAA+GGG - tig0024723:5328-5347 None:intergenic 20.0%
!! TAAAATGGATACTATAATGA+AGG - tig0024723:5329-5348 None:intergenic 20.0%
!! GTAACAATCTCAAAATTATA+TGG - tig0024723:5367-5386 None:intergenic 20.0%
!! ATTTATAATCGAAGTATAAC+AGG - tig0024723:5535-5554 None:intergenic 20.0%
!! ACTTCTAATAATTTGAAAAG+GGG - tig0024723:5729-5748 None:intergenic 20.0%
!! ATTTAATACACTACAAACAA+AGG + tig0024723:5819-5838 Msa1419690:intron 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG + tig0024723:5895-5914 Msa1419690:intron 20.0%
!! ATATATTGCAAGGATTTAAA+CGG - tig0024723:6023-6042 None:intergenic 20.0%
!!! AACAATTAATTTTTCCTGTT+TGG + tig0024723:6263-6282 Msa1419690:intron 20.0%
!!! ACAATTAATTTTTCCTGTTT+GGG + tig0024723:6264-6283 Msa1419690:intron 20.0%
!!! CTCAATAATACTTTTGAAAT+TGG - tig0024723:6312-6331 None:intergenic 20.0%
!!! ATTTCAAAAGTATTATTGAG+TGG + tig0024723:6312-6331 Msa1419690:intron 20.0%
!!! AGATTTTAAAAAAAAACCTC+TGG - tig0024723:6513-6532 None:intergenic 20.0%
!!! GGTTTTTTTTTAAAATCTTC+TGG + tig0024723:6515-6534 Msa1419690:intron 20.0%
!!! CTTTGGTTGATAATTTTATT+TGG + tig0024723:6767-6786 Msa1419690:intron 20.0%
!!! TTCAACTTTTCATCATATAT+TGG + tig0024723:7143-7162 Msa1419690:three_prime_UTR 20.0%
! AATTGAATTATCTGAAAAGC+AGG - tig0024723:427-446 None:intergenic 25.0%
! TGAATTGGTACATCAAAATT+TGG + tig0024723:446-465 Msa1419690:intron 25.0%
! GAATTGGTACATCAAAATTT+GGG + tig0024723:447-466 Msa1419690:intron 25.0%
! TGTACATATATATTCCTGAA+TGG - tig0024723:583-602 None:intergenic 25.0%
! GAATATATATGTACAAACTG+TGG + tig0024723:588-607 Msa1419690:CDS 25.0%
!!! TATTTTGGTTTCATTGTACT+TGG + tig0024723:694-713 Msa1419690:intron 25.0%
! TTATTTCAGATACAATGCTT+TGG + tig0024723:726-745 Msa1419690:intron 25.0%
! AATGTCTGTTATTATGTTTC+TGG + tig0024723:1075-1094 Msa1419690:intron 25.0%
!! TATAGGTTAAACAAGTTTTG+AGG + tig0024723:1114-1133 Msa1419690:intron 25.0%
!!! ATAGGTTAAACAAGTTTTGA+GGG + tig0024723:1115-1134 Msa1419690:intron 25.0%
!! TCTATTGAGACATCAATTTT+CGG - tig0024723:1303-1322 None:intergenic 25.0%
! ATTCGATAAAATGATGTTGT+CGG - tig0024723:1541-1560 None:intergenic 25.0%
! GATAAAAGGAAACAATAAGA+AGG + tig0024723:1637-1656 Msa1419690:intron 25.0%
!! TATTGTAGTCAGATTTTGTT+GGG + tig0024723:2085-2104 Msa1419690:intron 25.0%
! CTTAGTAAAACTGTTAACTT+TGG + tig0024723:2115-2134 Msa1419690:intron 25.0%
! TTAAAATTGTGAGTAGAGTT+TGG - tig0024723:2158-2177 None:intergenic 25.0%
!! TTTTAAACAAACATGACTGT+AGG + tig0024723:2172-2191 Msa1419690:intron 25.0%
! TAACATGCAAATTAAATCGT+AGG - tig0024723:2280-2299 None:intergenic 25.0%
! AAATATATCATCCAAAATGG+GGG - tig0024723:2853-2872 None:intergenic 25.0%
! GGAAAATATATCATCCAAAA+TGG - tig0024723:2856-2875 None:intergenic 25.0%
!!! GTTTTTATGCAAAATGGATT+GGG - tig0024723:2985-3004 None:intergenic 25.0%
!! AGTTTTTATGCAAAATGGAT+TGG - tig0024723:2986-3005 None:intergenic 25.0%
! TGGATTTAATAAAATTGGGT+TGG - tig0024723:3012-3031 None:intergenic 25.0%
!!! TAAATGGATACAGTTTTTTC+TGG - tig0024723:3032-3051 None:intergenic 25.0%
! CAGATAAAGTTAACTGTTTA+TGG + tig0024723:3055-3074 Msa1419690:intron 25.0%
! AAAGTGACAACATCATATTA+TGG - tig0024723:3145-3164 None:intergenic 25.0%
! TGTCTTATAGTTTGAATCAA+CGG + tig0024723:3214-3233 Msa1419690:intron 25.0%
! ATCTATTCTCTTCCATTAAT+TGG + tig0024723:3296-3315 Msa1419690:intron 25.0%
! CAGAATTTCTCATTTCTAAA+AGG - tig0024723:3408-3427 None:intergenic 25.0%
! AATTCTGCAGGTAAAAAAAA+CGG + tig0024723:3421-3440 Msa1419690:intron 25.0%
! CTAGATTTATGGATACAATT+TGG - tig0024723:3626-3645 None:intergenic 25.0%
! TTGTATCCATAAATCTAGTT+TGG + tig0024723:3628-3647 Msa1419690:intron 25.0%
!! TGTTGAATTTTCAAATGACA+AGG - tig0024723:3829-3848 None:intergenic 25.0%
! CTTCTTAGAAAAAATAGTTG+GGG + tig0024723:4057-4076 Msa1419690:intron 25.0%
!!! GGTATTTTTCTTTTTCAAGT+TGG + tig0024723:4078-4097 Msa1419690:intron 25.0%
!! CCCTTTTATTGTTTTCTATA+AGG + tig0024723:4283-4302 Msa1419690:intron 25.0%
!! TTTTCACCATTACTATCATT+TGG + tig0024723:4323-4342 Msa1419690:intron 25.0%
!!! AAGTTTCATTTCTGGTTTAT+TGG + tig0024723:4371-4390 Msa1419690:intron 25.0%
!!! AGTTTCATTTCTGGTTTATT+GGG + tig0024723:1933-1952 Msa1419690:intron 25.0%
! AAATTTCAGTGTAATCAGAT+TGG - tig0024723:5141-5160 None:intergenic 25.0%
! AATCTGATTACACTGAAATT+TGG + tig0024723:5140-5159 Msa1419690:intron 25.0%
! ACAATTAGCAGTCATATATA+CGG - tig0024723:5192-5211 None:intergenic 25.0%
!!! GTAATGATAAAGCTCTAAAA+TGG - tig0024723:5344-5363 None:intergenic 25.0%
! AATGACTAAGAATGAATGAT+AGG + tig0024723:5403-5422 Msa1419690:intron 25.0%
! GACTAATCTCTAATTTCTAA+AGG + tig0024723:5471-5490 Msa1419690:intron 25.0%
! CAAATGAGTGCTTATATATA+AGG - tig0024723:5682-5701 None:intergenic 25.0%
!! ATTAATTAGGGGTATGTTTA+GGG - tig0024723:5766-5785 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - tig0024723:5767-5786 None:intergenic 25.0%
! ATTCACTATTCAGCAATTAT+AGG + tig0024723:5951-5970 Msa1419690:intron 25.0%
!!! TATTTTAGAAAATGGTAGCT+TGG + tig0024723:6049-6068 Msa1419690:intron 25.0%
! TGTGCTTAACATATATGATA+TGG + tig0024723:6205-6224 Msa1419690:intron 25.0%
! GTGCTTAACATATATGATAT+GGG + tig0024723:6206-6225 Msa1419690:intron 25.0%
!! AATCTATCTTGTTTATTCCA+CGG - tig0024723:6362-6381 None:intergenic 25.0%
! ACTTAATATCTCTCAGAAAA+TGG + tig0024723:6386-6405 Msa1419690:intron 25.0%
! CTTAATATCTCTCAGAAAAT+GGG + tig0024723:6387-6406 Msa1419690:intron 25.0%
!!! TCATCATTTTGTTTATGCTT+TGG + tig0024723:6750-6769 Msa1419690:intron 25.0%
!!! ACTTTTAAAGGAAATGCAAT+TGG + tig0024723:6815-6834 Msa1419690:intron 25.0%
! GCTGATGAAAATAATCATAA+TGG + tig0024723:6918-6937 Msa1419690:exon 25.0%
! GTGATTAACTTAAAAGTCAA+CGG - tig0024723:7118-7137 None:intergenic 25.0%
! TATGATGAAAAGTTGAAAAC+TGG - tig0024723:7140-7159 None:intergenic 25.0%
! TAACATACAGTTTCAAAGTA+GGG - tig0024723:7181-7200 None:intergenic 25.0%
! ATAACATACAGTTTCAAAGT+AGG - tig0024723:7182-7201 None:intergenic 25.0%
! TGGTAAGTAATAATGTGAAA+TGG - tig0024723:7238-7257 None:intergenic 25.0%
! CATTATTACTTACCAATGAA+TGG + tig0024723:7243-7262 Msa1419690:three_prime_UTR 25.0%
!! AAATCAAAGTATCCATTCAT+TGG - tig0024723:7258-7277 None:intergenic 25.0%
!! ATTTTAACACAGACAGCAAA+AGG + tig0024723:191-210 Msa1419690:intron 30.0%
!! TTGTTTTATTGCAGAGAGAA+GGG + tig0024723:383-402 Msa1419690:intron 30.0%
ATTTGGGCTCTTTCATAAAT+AGG + tig0024723:463-482 Msa1419690:intron 30.0%
TTTGTTGCAGATATATGATG+TGG + tig0024723:497-516 Msa1419690:intron 30.0%
!! GTTAATATCTTTTGAAGACG+AGG + tig0024723:759-778 Msa1419690:CDS 30.0%
!! GTTCTGTTTGTTTCTATTTG+TGG + tig0024723:945-964 Msa1419690:intron 30.0%
!! CTATTTGTGGCTTTATATGT+TGG + tig0024723:958-977 Msa1419690:intron 30.0%
!! GTTATTATGTTTCTGGTGTT+AGG + tig0024723:1082-1101 Msa1419690:intron 30.0%
GTGTTAGGCTATGTATTTAT+AGG + tig0024723:1097-1116 Msa1419690:intron 30.0%
! AATATTCTAAAGACCTCTAG+AGG + tig0024723:1200-1219 Msa1419690:intron 30.0%
TTCCTATAAATTACCTCTAG+AGG - tig0024723:1216-1235 None:intergenic 30.0%
! ATGATTTTTCTATCTCTGCT+TGG + tig0024723:1237-1256 Msa1419690:intron 30.0%
TACAGTTTGGGTACAAAAAA+TGG - tig0024723:1517-1536 None:intergenic 30.0%
TAACTAGCTAAACCTATGAT+TGG + tig0024723:1607-1626 Msa1419690:intron 30.0%
!! ATTGTTTCTATATGTTGGAC+AGG + tig0024723:1720-1739 Msa1419690:intron 30.0%
ATTGTAGTTAGGCAAGAATT+GGG + tig0024723:1753-1772 Msa1419690:intron 30.0%
TAGAGAAGTAGGCTATTAAT+AGG - tig0024723:1870-1889 None:intergenic 30.0%
AAATGAAACTCAGAACAGTA+AGG - tig0024723:1923-1942 None:intergenic 30.0%
! GTATTGTAGTCAGATTTTGT+TGG + tig0024723:2084-2103 Msa1419690:intron 30.0%
! ATTGTAGTCAGATTTTGTTG+GGG + tig0024723:2086-2105 Msa1419690:intron 30.0%
! AAATCTCATCTGGGATATAA+TGG + tig0024723:2467-2486 Msa1419690:CDS 30.0%
!! TTTTAAGGAATTGGAGAGAA+AGG + tig0024723:2535-2554 Msa1419690:intron 30.0%
AAGGAGAGAAAATGATAGAA+AGG + tig0024723:2554-2573 Msa1419690:intron 30.0%
AGGAGAGAAAATGATAGAAA+GGG + tig0024723:2555-2574 Msa1419690:intron 30.0%
TCAAAGATTCAGTATTTCAG+TGG - tig0024723:2658-2677 None:intergenic 30.0%
! TACTGAATCTTTGAAGATTC+CGG + tig0024723:2664-2683 Msa1419690:intron 30.0%
ATGGGAAAAAGAACATAGTA+TGG - tig0024723:2810-2829 None:intergenic 30.0%
! CTTTTTCCCATCAATTTTCT+TGG + tig0024723:2819-2838 Msa1419690:intron 30.0%
AGAGATCCAAGAAAATTGAT+GGG - tig0024723:2828-2847 None:intergenic 30.0%
AAGAGATCCAAGAAAATTGA+TGG - tig0024723:2829-2848 None:intergenic 30.0%
AATATATCATCCAAAATGGG+GGG - tig0024723:2852-2871 None:intergenic 30.0%
! GGATCAGTTTTTATGCAAAA+TGG - tig0024723:2991-3010 None:intergenic 30.0%
AAGAGAATAGATATGAGAAG+AGG - tig0024723:3288-3307 None:intergenic 30.0%
TGGAGGCAGAATTTATAAAA+GGG - tig0024723:3331-3350 None:intergenic 30.0%
TTAGAAATGAGAAATTCTGC+AGG + tig0024723:3409-3428 Msa1419690:intron 30.0%
!!! AACCAATTTTTTACCTGAAC+CGG - tig0024723:3461-3480 None:intergenic 30.0%
! TTCAGGTAAAAAATTGGTTC+AGG + tig0024723:3462-3481 Msa1419690:intron 30.0%
ACTGAACCAAACTAGATTTA+TGG - tig0024723:3637-3656 None:intergenic 30.0%
! AAATCTAGTTTGGTTCAGTT+TGG + tig0024723:3638-3657 Msa1419690:intron 30.0%
ATGGGAAAAAGAACATAGTA+TGG - tig0024723:2810-2829 None:intergenic 30.0%
! CTTTTTCCCATCAATTTTCT+TGG + tig0024723:2819-2838 Msa1419690:intron 30.0%
AGAGATCCAAGAAAATTGAT+GGG - tig0024723:2828-2847 None:intergenic 30.0%
AAGAGATCCAAGAAAATTGA+TGG - tig0024723:2829-2848 None:intergenic 30.0%
TTGATAAGGTCATCCAAAAT+GGG - tig0024723:3756-3775 None:intergenic 30.0%
TTTGATAAGGTCATCCAAAA+TGG - tig0024723:3757-3776 None:intergenic 30.0%
ATAAGAGACTCTAGTACTAT+AGG + tig0024723:3848-3867 Msa1419690:intron 30.0%
!!! AGTTGGTGTTGTTTTCTATA+AGG + tig0024723:4095-4114 Msa1419690:intron 30.0%
!!! GTGTTGTTTTCTATAAGGAA+GGG + tig0024723:4100-4119 Msa1419690:intron 30.0%
!!! TGTTGTTTTCTATAAGGAAG+GGG + tig0024723:4101-4120 Msa1419690:intron 30.0%
AAAACAATAAAAGGGAAGCT+CGG - tig0024723:4278-4297 None:intergenic 30.0%
CCATTTCCAAATGATAGTAA+TGG - tig0024723:4332-4351 None:intergenic 30.0%
CCATTACTATCATTTGGAAA+TGG + tig0024723:4329-4348 Msa1419690:intron 30.0%
! TTATGGCAAACATGTTTTGT+TGG + tig0024723:4451-4470 Msa1419690:intron 30.0%
TTCTATTAATGAATGTGGAC+AGG + tig0024723:4533-4552 Msa1419690:intron 30.0%
TTTATAGGATGAGTATGTCA+AGG + tig0024723:4922-4941 Msa1419690:intron 30.0%
CAATTAGCAGTCATATATAC+GGG - tig0024723:5191-5210 None:intergenic 30.0%
CTTGTAATTTATTAGATGGG+AGG - tig0024723:5242-5261 None:intergenic 30.0%
TTAAGCGCTCTAATAACTTA+CGG + tig0024723:5269-5288 Msa1419690:intron 30.0%
GGTTTCATTATAGTATTGCA+TGG + tig0024723:5291-5310 Msa1419690:intron 30.0%
GAACACTCAAACATCTTAAT+AGG + tig0024723:5425-5444 Msa1419690:intron 30.0%
TGAGTGCTTATATATAAGGA+CGG - tig0024723:5678-5697 None:intergenic 30.0%
ACTACAAACAAAGGACAATT+TGG + tig0024723:5828-5847 Msa1419690:intron 30.0%
AGAAATGTGAAAAAGGCAAA+AGG + tig0024723:5902-5921 Msa1419690:intron 30.0%
GCAAAAGGAGCTTATATATA+GGG + tig0024723:5917-5936 Msa1419690:intron 30.0%
AAGTCATCCAAGAGTTTAAT+TGG + tig0024723:6086-6105 Msa1419690:intron 30.0%
AGTCATCCAAGAGTTTAATT+GGG + tig0024723:6087-6106 Msa1419690:intron 30.0%
TAACATATATGATATGGGTG+TGG + tig0024723:6211-6230 Msa1419690:intron 30.0%
TTCTAATAGTAATCCCAAAC+AGG - tig0024723:6280-6299 None:intergenic 30.0%
AACCATCTTGACACTTAATA+GGG + tig0024723:6441-6460 Msa1419690:intron 30.0%
!!! AAAACCTCTGGTTTTAGAAT+GGG - tig0024723:6501-6520 None:intergenic 30.0%
!!! AAAAACCTCTGGTTTTAGAA+TGG - tig0024723:6502-6521 None:intergenic 30.0%
AAAATCTTAACACATGGACA+TGG - tig0024723:6552-6571 None:intergenic 30.0%
! ATGTCCATGTGTTAAGATTT+TGG + tig0024723:6551-6570 Msa1419690:intron 30.0%
AAACTGTATGTTATGATGAC+TGG + tig0024723:7188-7207 Msa1419690:three_prime_UTR 30.0%
TAATAATGTGAAATGGAGTC+AGG - tig0024723:7231-7250 None:intergenic 30.0%
!! ATACTTTGATTTGTGAATCG+TGG + tig0024723:7266-7285 Msa1419690:three_prime_UTR 30.0%
!! TACTTTGATTTGTGAATCGT+GGG + tig0024723:7267-7286 Msa1419690:three_prime_UTR 30.0%
!! GTTGTTTTATTGCAGAGAGA+AGG + tig0024723:382-401 Msa1419690:intron 35.0%
TGCAGATATATGATGTGGTT+AGG + tig0024723:502-521 Msa1419690:intron 35.0%
TATGTACAAACTGTGGCAAA+AGG + tig0024723:595-614 Msa1419690:CDS 35.0%
CTCTTGACAAAATATGATGC+AGG - tig0024723:642-661 None:intergenic 35.0%
! ACGTTGTAATGGAAAACTAG+AGG + tig0024723:795-814 Msa1419690:CDS 35.0%
! CATAGTTGTTTGCTGGAATT+GGG + tig0024723:1020-1039 Msa1419690:intron 35.0%
! GACCTCTAGAGGTAATTTAT+AGG + tig0024723:1211-1230 Msa1419690:intron 35.0%
GAACATAACAGAATGTGACA+GGG + tig0024723:1666-1685 Msa1419690:intron 35.0%
GATTGTAGTTAGGCAAGAAT+TGG + tig0024723:1752-1771 Msa1419690:intron 35.0%
! ACTGTTCTGAGTTTCATTTC+TGG + tig0024723:1924-1943 Msa1419690:intron 35.0%
TAAAACTGTTAACTTTGGGC+TGG + tig0024723:2120-2139 Msa1419690:intron 35.0%
TGCTAAAGCTTACACAACAA+CGG + tig0024723:2228-2247 Msa1419690:intron 35.0%
GAAGCTACAAAAGAAAGTGA+AGG - tig0024723:2254-2273 None:intergenic 35.0%
! TCACTTTCTTTTGTAGCTTC+TGG + tig0024723:2254-2273 Msa1419690:intron 35.0%
CTTTAGTAGATCAAGTCAGT+CGG + tig0024723:2342-2361 Msa1419690:CDS 35.0%
TTTAGTAGATCAAGTCAGTC+GGG + tig0024723:2343-2362 Msa1419690:CDS 35.0%
! AATTTGGTAGTCTTCAAGCT+TGG + tig0024723:2387-2406 Msa1419690:CDS 35.0%
! ATTTGGTAGTCTTCAAGCTT+GGG + tig0024723:2388-2407 Msa1419690:CDS 35.0%
TGGTGATTCTAAATCTCATC+TGG + tig0024723:2457-2476 Msa1419690:CDS 35.0%
GGTGATTCTAAATCTCATCT+GGG + tig0024723:2458-2477 Msa1419690:CDS 35.0%
!!! ATCCTGCTGTTTTAAGGAAT+TGG + tig0024723:2526-2545 Msa1419690:intron 35.0%
GAAAATGATAGAAAGGAGAG+AGG + tig0024723:2561-2580 Msa1419690:intron 35.0%
GAGGAGAGAAAATGATAGAA+AGG + tig0024723:2580-2599 Msa1419690:intron 35.0%
! TTGGCATGGTTAGTTAAGAA+CGG - tig0024723:2719-2738 None:intergenic 35.0%
AAGAACATAGTATGGTTGCT+TGG - tig0024723:2802-2821 None:intergenic 35.0%
TTACAAGTACAACACCTAGA+GGG - tig0024723:2894-2913 None:intergenic 35.0%
! TAGGTGTTGTACTTGTAAGT+AGG + tig0024723:2896-2915 Msa1419690:intron 35.0%
! AGGTGTTGTACTTGTAAGTA+GGG + tig0024723:2897-2916 Msa1419690:intron 35.0%
CCATAGTTATCATCTACTTC+AGG - tig0024723:3177-3196 None:intergenic 35.0%
CCTGAAGTAGATGATAACTA+TGG + tig0024723:3174-3193 Msa1419690:intron 35.0%
GAGAAGAGGAAAAATCTCAA+AGG - tig0024723:3274-3293 None:intergenic 35.0%
GGGTTGAAATAGCCAATTAA+TGG - tig0024723:3311-3330 None:intergenic 35.0%
GTGGAGGCAGAATTTATAAA+AGG - tig0024723:3332-3351 None:intergenic 35.0%
! ATGTTAGCTTGGAATCATAG+TGG - tig0024723:3351-3370 None:intergenic 35.0%
! AAGCTAACATGTCCTCTTTT+GGG + tig0024723:3361-3380 Msa1419690:intron 35.0%
TGCAGGTAAAAAAAACGGTT+CGG + tig0024723:3426-3445 Msa1419690:intron 35.0%
! AACCGGTTCAGGTAAAAAAT+TGG + tig0024723:3456-3475 Msa1419690:intron 35.0%
!!! GAACTGGTTTTTTACTGAAC+TGG - tig0024723:3497-3516 None:intergenic 35.0%
AACCAGTTCAGAACAAAATC+CGG + tig0024723:3508-3527 Msa1419690:intron 35.0%
AAGAACATAGTATGGTTGCT+TGG - tig0024723:2802-2821 None:intergenic 35.0%
TGATAAGGTCATCCAAAATG+GGG - tig0024723:3755-3774 None:intergenic 35.0%
ATTTGATGAGTGGAGAGATA+TGG + tig0024723:3933-3952 Msa1419690:intron 35.0%
CTATATATTGGATAGGTGAG+AGG + tig0024723:3964-3983 Msa1419690:intron 35.0%
!!! GGTGTTGTTTTCTATAAGGA+AGG + tig0024723:4099-4118 Msa1419690:intron 35.0%
!! GTTGTTTTCTATAAGGAAGG+GGG + tig0024723:4102-4121 Msa1419690:intron 35.0%
GGTGAAAACAATAGAGCAAT+AGG - tig0024723:4311-4330 None:intergenic 35.0%
TATTAATGAATGTGGACAGG+TGG + tig0024723:4536-4555 Msa1419690:intron 35.0%
! GGTGTTAAATCTGAAACTGA+CGG + tig0024723:4594-4613 Msa1419690:CDS 35.0%
AACTGACGGTACATCTTTAA+AGG + tig0024723:4608-4627 Msa1419690:CDS 35.0%
ATACCTGATGTAATCATCCA+TGG - tig0024723:4642-4661 None:intergenic 35.0%
AAGCAGGAAACAAAAATGGA+CGG + tig0024723:4693-4712 Msa1419690:CDS 35.0%
GACGATAAAAAGTCAACAGT+TGG + tig0024723:4747-4766 Msa1419690:intron 35.0%
!!! GTTTTGATTTCAAGCCAACT+TGG - tig0024723:5054-5073 None:intergenic 35.0%
TCAGTGTAATCAGATTGGAA+AGG - tig0024723:5136-5155 None:intergenic 35.0%
TAAGCGCTCTAATAACTTAC+GGG + tig0024723:5270-5289 Msa1419690:intron 35.0%
TGCTTATATATAAGGACGGA+GGG - tig0024723:5674-5693 None:intergenic 35.0%
GGCAAAAGGAGCTTATATAT+AGG + tig0024723:5916-5935 Msa1419690:intron 35.0%
AGCTTATATATAGGGACAGA+GGG + tig0024723:5925-5944 Msa1419690:intron 35.0%
! AAAGTATTATTGAGTGGCCA+TGG + tig0024723:6318-6337 Msa1419690:intron 35.0%
CAACCATCTTGACACTTAAT+AGG + tig0024723:6440-6459 Msa1419690:intron 35.0%
ATCCCTATTAAGTGTCAAGA+TGG - tig0024723:6446-6465 None:intergenic 35.0%
ATCTTGACACTTAATAGGGA+TGG + tig0024723:6445-6464 Msa1419690:intron 35.0%
ATCGCCAAAATCTTAACACA+TGG - tig0024723:6558-6577 None:intergenic 35.0%
!! ATGTGTTAAGATTTTGGCGA+TGG + tig0024723:6557-6576 Msa1419690:intron 35.0%
!! TGTGTTAAGATTTTGGCGAT+GGG + tig0024723:6558-6577 Msa1419690:intron 35.0%
TACACCCAGATCAGAAATTA+GGG - tig0024723:6795-6814 None:intergenic 35.0%
TTACACCCAGATCAGAAATT+AGG - tig0024723:6796-6815 None:intergenic 35.0%
! GATCTGGGTGTAACTTTTAA+AGG + tig0024723:6803-6822 Msa1419690:intron 35.0%
AAATGCAATTGGAGCTTACA+AGG + tig0024723:6826-6845 Msa1419690:CDS 35.0%
ATAGCTTATTCTGATCTGCT+AGG + tig0024723:6955-6974 Msa1419690:three_prime_UTR 35.0%
AATTATGTACCACACAAGAC+CGG + tig0024723:7019-7038 Msa1419690:three_prime_UTR 35.0%
AACACCATAGGTAAAACGTT+GGG - tig0024723:7297-7316 None:intergenic 35.0%
AGGAAAAGAGGGAGAAGAAA+AGG + tig0024723:262-281 Msa1419690:CDS 40.0%
ACGCTGAAGAATACAATCAG+TGG - tig0024723:342-361 None:intergenic 40.0%
AGAGAACAAGAACACCATTC+AGG + tig0024723:566-585 Msa1419690:CDS 40.0%
TTCCACTGTGAACGTTGTAA+TGG + tig0024723:784-803 Msa1419690:CDS 40.0%
TTCCATTACAACGTTCACAG+TGG - tig0024723:789-808 None:intergenic 40.0%
GATAAGTTAGCTGCTCAAGA+CGG + tig0024723:826-845 Msa1419690:CDS 40.0%
ATAAGTTAGCTGCTCAAGAC+GGG + tig0024723:827-846 Msa1419690:CDS 40.0%
AAAGGACATGCTTCAGAAGA+TGG + tig0024723:903-922 Msa1419690:CDS 40.0%
TCATCACCATAGTTGTTTGC+TGG + tig0024723:1013-1032 Msa1419690:intron 40.0%
CCAATTCCAGCAAACAACTA+TGG - tig0024723:1022-1041 None:intergenic 40.0%
! CCATAGTTGTTTGCTGGAAT+TGG + tig0024723:1019-1038 Msa1419690:intron 40.0%
!! ATCATACATATAGAGGTGCC+TGG + tig0024723:1162-1181 Msa1419690:intron 40.0%
!! TCATACATATAGAGGTGCCT+GGG + tig0024723:1163-1182 Msa1419690:intron 40.0%
CTATATCCCTGTCTTCCATT+TGG + tig0024723:1444-1463 Msa1419690:intron 40.0%
TATCGAATCAGTCCGATACA+TGG + tig0024723:1553-1572 Msa1419690:intron 40.0%
TCCTAAAGTGGACCATGTAT+CGG - tig0024723:1568-1587 None:intergenic 40.0%
! TACATGGTCCACTTTAGGAA+AGG + tig0024723:1569-1588 Msa1419690:intron 40.0%
AGCTAGTTATCTAGCTGTCT+CGG - tig0024723:1596-1615 None:intergenic 40.0%
TTATCTCACGAGCCAATCAT+AGG - tig0024723:1622-1641 None:intergenic 40.0%
!! TGATTGGCTCGTGAGATAAA+AGG + tig0024723:1623-1642 Msa1419690:intron 40.0%
AGGAAACAATAAGAAGGGAG+AGG + tig0024723:1643-1662 Msa1419690:intron 40.0%
GGAAACAATAAGAAGGGAGA+GGG + tig0024723:1644-1663 Msa1419690:intron 40.0%
GGAACATAACAGAATGTGAC+AGG + tig0024723:1665-1684 Msa1419690:intron 40.0%
! TGGATGCAACATTTTGTCCT+TGG + tig0024723:1779-1798 Msa1419690:intron 40.0%
TCTTCATAGGAAGACTGTTC+TGG + tig0024723:1813-1832 Msa1419690:intron 40.0%
CTTCATAGGAAGACTGTTCT+GGG + tig0024723:1814-1833 Msa1419690:intron 40.0%
CGTGAAATCAGTAGAGAAGT+AGG - tig0024723:1881-1900 None:intergenic 40.0%
CTTGCGTGAACTAATACACT+AGG - tig0024723:2026-2045 None:intergenic 40.0%
!! CGACTGACTTGATCTACTAA+AGG - tig0024723:2344-2363 None:intergenic 40.0%
!! AGACTACCAAATTCTGGAAC+AGG - tig0024723:2380-2399 None:intergenic 40.0%
GCTTGAAGACTACCAAATTC+TGG - tig0024723:2386-2405 None:intergenic 40.0%
AAAACAGCAGGATGTTACCT+TGG - tig0024723:2519-2538 None:intergenic 40.0%
!!! GGTAACATCCTGCTGTTTTA+AGG + tig0024723:2520-2539 Msa1419690:intron 40.0%
CTCCAATTCCTTAAAACAGC+AGG - tig0024723:2531-2550 None:intergenic 40.0%
CAGCTAGTAACTATATGCAC+CGG - tig0024723:2686-2705 None:intergenic 40.0%
! CTTTCAAGTACAACACCTAG+AGG - tig0024723:2770-2789 None:intergenic 40.0%
! CTCTAGGTGTTGTACTTGAA+AGG + tig0024723:2768-2787 Msa1419690:intron 40.0%
CTTACAAGTACAACACCTAG+AGG - tig0024723:2895-2914 None:intergenic 40.0%
! GGTGTTGTACTTGTAAGTAG+GGG + tig0024723:2898-2917 Msa1419690:intron 40.0%
!!! ATGGATTGGGCTTTTTAGAC+AGG - tig0024723:2972-2991 None:intergenic 40.0%
! TTAGCTTGGAATCATAGTGG+AGG - tig0024723:3348-3367 None:intergenic 40.0%
CAAAAGAGGACATGTTAGCT+TGG - tig0024723:3362-3381 None:intergenic 40.0%
! CAAGCTAACATGTCCTCTTT+TGG + tig0024723:3360-3379 Msa1419690:intron 40.0%
TTGACTTTGTGACCCAAAAG+AGG - tig0024723:3376-3395 None:intergenic 40.0%
GCAGGTAAAAAAAACGGTTC+GGG + tig0024723:3427-3446 Msa1419690:intron 40.0%
! AACGGTTCGGGTAATAAAAC+CGG + tig0024723:3439-3458 Msa1419690:intron 40.0%
!! AACCGGATTTTGTTCTGAAC+TGG - tig0024723:3513-3532 None:intergenic 40.0%
TGGACTGAACTTTATCGAAC+CGG + tig0024723:3558-3577 Msa1419690:intron 40.0%
ATAAGGTCATCCAAAATGGG+GGG - tig0024723:3753-3772 None:intergenic 40.0%
GATAAGGTCATCCAAAATGG+GGG - tig0024723:3754-3773 None:intergenic 40.0%
ATAGAGGGAAACTGTTGGAA+GGG + tig0024723:3879-3898 Msa1419690:intron 40.0%
AGTTAGGCAAGAATTGGTAG+TGG + tig0024723:3995-4014 Msa1419690:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + tig0024723:4147-4166 Msa1419690:intron 40.0%
! TTACACAAGAGGTTGTTTCC+AGG - tig0024723:4187-4206 None:intergenic 40.0%
TGGAAACAACCTCTTGTGTA+AGG + tig0024723:4186-4205 Msa1419690:intron 40.0%
! TGTATGTAGCCTTACACAAG+AGG - tig0024723:4198-4217 None:intergenic 40.0%
GCTACATACAATACGCCAAA+TGG + tig0024723:4208-4227 Msa1419690:intron 40.0%
ACATACAATACGCCAAATGG+TGG + tig0024723:4211-4230 Msa1419690:intron 40.0%
CATACAATACGCCAAATGGT+GGG + tig0024723:4212-4231 Msa1419690:intron 40.0%
!! GGTTTCTAGTACCTATCTCT+CGG + tig0024723:4393-4412 Msa1419690:intron 40.0%
! GTTGACTTCAATGGTACTGA+AGG + tig0024723:4561-4580 Msa1419690:CDS 40.0%
! TTCAATGGTACTGAAGGCAA+AGG + tig0024723:4567-4586 Msa1419690:CDS 40.0%
!! CTTTAAAGGTTTTGCCTCCA+TGG + tig0024723:4622-4641 Msa1419690:CDS 40.0%
AATCTTACGAAAGAACAGCG+TGG + tig0024723:4663-4682 Msa1419690:CDS 40.0%
GGTGAAGCAGGAAACAAAAA+TGG + tig0024723:4689-4708 Msa1419690:CDS 40.0%
AGCAGGAAACAAAAATGGAC+GGG + tig0024723:4694-4713 Msa1419690:CDS 40.0%
TTGATTTCAAGCCAACTTGG+CGG - tig0024723:5051-5070 None:intergenic 40.0%
TGGCTTGAAATCAAAACGTG+AGG + tig0024723:5057-5076 Msa1419690:CDS 40.0%
AAACGTGAGGAAGATGATGA+TGG + tig0024723:5070-5089 Msa1419690:CDS 40.0%
! CTTAGTCATTGTCGCTTCAA+TGG - tig0024723:5393-5412 None:intergenic 40.0%
GTGCTTATATATAAGGACGG+AGG - tig0024723:5675-5694 None:intergenic 40.0%
GAGCTTATATATAGGGACAG+AGG + tig0024723:5924-5943 Msa1419690:intron 40.0%
! TTGGATGACTTTGAGAGCAT+GGG - tig0024723:6077-6096 None:intergenic 40.0%
ATCCAAGAGTTTAATTGGGC+TGG + tig0024723:6091-6110 Msa1419690:intron 40.0%
AACCAGCCCAATTAAACTCT+TGG - tig0024723:6096-6115 None:intergenic 40.0%
! TTGTAATTCCTCGGTTGGTT+TGG + tig0024723:6114-6133 Msa1419690:intron 40.0%
CATATATGATATGGGTGTGG+CGG + tig0024723:6214-6233 Msa1419690:intron 40.0%
TGACACTTAATAGGGATGGA+AGG + tig0024723:6449-6468 Msa1419690:intron 40.0%
!! ATGTCCCATTCTAAAACCAG+AGG + tig0024723:6494-6513 Msa1419690:intron 40.0%
!! GTGTTAAGATTTTGGCGATG+GGG + tig0024723:6559-6578 Msa1419690:intron 40.0%
AGATAATGAGCAGCTAACTC+CGG - tig0024723:7041-7060 None:intergenic 40.0%
AGTTTCAAAGTAGGGTTGTC+TGG - tig0024723:7173-7192 None:intergenic 40.0%
GTCAGGATAACACTATTCTC+TGG - tig0024723:7214-7233 None:intergenic 40.0%
CAACACCATAGGTAAAACGT+TGG - tig0024723:7298-7317 None:intergenic 40.0%
ATTGATGTGTGCAACACCAT+AGG - tig0024723:7309-7328 None:intergenic 40.0%
TGAAGCTACGACAGGAAAAG+AGG + tig0024723:250-269 Msa1419690:CDS 45.0%
GAAGCTACGACAGGAAAAGA+GGG + tig0024723:251-270 Msa1419690:CDS 45.0%
CTGCTGTCTAGATTATGCAC+AGG + tig0024723:307-326 Msa1419690:CDS 45.0%
! ACAATGCTTTGGATGCACTG+CGG + tig0024723:737-756 Msa1419690:CDS 45.0%
TAAGTTAGCTGCTCAAGACG+GGG + tig0024723:828-847 Msa1419690:CDS 45.0%
ATGAGAATGCACGAAGACGA+CGG + tig0024723:869-888 Msa1419690:CDS 45.0%
ACGACGGCGTGAAAAGTTAA+AGG + tig0024723:885-904 Msa1419690:CDS 45.0%
ATTGAACTGAACTGACACCC+AGG - tig0024723:1183-1202 None:intergenic 45.0%
AGAAGCAACTAGAAAGAGCC+AGG + tig0024723:1418-1437 Msa1419690:intron 45.0%
ATCCCTGTCTTCCATTTGGT+AGG + tig0024723:1448-1467 Msa1419690:intron 45.0%
TCCCTGTCTTCCATTTGGTA+GGG + tig0024723:1449-1468 Msa1419690:intron 45.0%
TCTGATGATCCCCTACCAAA+TGG - tig0024723:1462-1481 None:intergenic 45.0%
! GATGTTGTCGGCTACAGTTT+GGG - tig0024723:1529-1548 None:intergenic 45.0%
! TGATGTTGTCGGCTACAGTT+TGG - tig0024723:1530-1549 None:intergenic 45.0%
TCCGATACATGGTCCACTTT+AGG + tig0024723:1564-1583 Msa1419690:intron 45.0%
GCTAGTTATCTAGCTGTCTC+GGG - tig0024723:1595-1614 None:intergenic 45.0%
CTATATGTTGGACAGGTGAG+AGG + tig0024723:1727-1746 Msa1419690:intron 45.0%
GTGAGAGGTCGATTGTAGTT+AGG + tig0024723:1742-1761 Msa1419690:intron 45.0%
GTTAGGCAAGAATTGGGTAG+TGG + tig0024723:1759-1778 Msa1419690:intron 45.0%
TGAAGATATCAGTCTCGCCA+AGG - tig0024723:1799-1818 None:intergenic 45.0%
GGCGAGACTGATATCTTCAT+AGG + tig0024723:1800-1819 Msa1419690:intron 45.0%
TGTACTTCTTGTGCTAGTGC+AGG + tig0024723:2307-2326 Msa1419690:intron 45.0%
GACTTGCCTGTTCCAGAATT+TGG + tig0024723:2371-2390 Msa1419690:CDS 45.0%
GCAGCTAATGGAGATAATGC+TGG + tig0024723:2437-2456 Msa1419690:CDS 45.0%
! GTAGGGGTGTGCAAATAAAC+TGG + tig0024723:2914-2933 Msa1419690:intron 45.0%
! TCGGGTAATAAAACCGGTTC+AGG + tig0024723:3445-3464 Msa1419690:intron 45.0%
CTGGTTCATGCTATCTGAAC+CGG - tig0024723:3530-3549 None:intergenic 45.0%
!! AGCATGAACCAGTTCTGAAC+TGG + tig0024723:3538-3557 Msa1419690:intron 45.0%
AGTTCAGTCCAGTTCAGAAC+TGG - tig0024723:3549-3568 None:intergenic 45.0%
! TACAAGTAGGGGTGTGCAAA+TGG - tig0024723:3669-3688 None:intergenic 45.0%
TTTGCACACCCCTACTTGTA+AGG + tig0024723:3669-3688 Msa1419690:intron 45.0%
TCTCTCTGCCTTACAAGTAG+GGG - tig0024723:3680-3699 None:intergenic 45.0%
GTCTCTCTGCCTTACAAGTA+GGG - tig0024723:3681-3700 None:intergenic 45.0%
ACTCTAGTACTATAGGCTCG+TGG + tig0024723:3855-3874 Msa1419690:intron 45.0%
CTCTAGTACTATAGGCTCGT+GGG + tig0024723:3856-3875 Msa1419690:intron 45.0%
GATAGAGGGAAACTGTTGGA+AGG + tig0024723:3878-3897 Msa1419690:intron 45.0%
GATGGGAGTTAGGCAAGAAT+TGG + tig0024723:3989-4008 Msa1419690:intron 45.0%
!! TAGGCAAGAATTGGTAGTGG+TGG + tig0024723:3998-4017 Msa1419690:intron 45.0%
!! GAATTGGTAGTGGTGGTAAC+TGG + tig0024723:4005-4024 Msa1419690:intron 45.0%
! GGTGGTAACTGGTAATGCTT+TGG + tig0024723:4016-4035 Msa1419690:intron 45.0%
TCATGTGACTGAAAGGTCAC+AGG + tig0024723:4154-4173 Msa1419690:intron 45.0%
TTCTAGTACCTATCTCTCGG+AGG + tig0024723:4396-4415 Msa1419690:intron 45.0%
CAGTCTGTGTGTCTCGTTTA+TGG + tig0024723:4434-4453 Msa1419690:intron 45.0%
! CAGGTGGTAGTTGACTTCAA+TGG + tig0024723:4552-4571 Msa1419690:intron 45.0%
CCTGATGTAATCATCCATGG+AGG - tig0024723:4639-4658 None:intergenic 45.0%
CCTCCATGGATGATTACATC+AGG + tig0024723:4636-4655 Msa1419690:CDS 45.0%
! GTCTGTGAATTGCACTGATG+TGG - tig0024723:4730-4749 None:intergenic 45.0%
!! TCAAAGGCACGCACAAGTTT+TGG + tig0024723:4870-4889 Msa1419690:intron 45.0%
GCTTAAGAAGCAACGCGAAT+TGG + tig0024723:4961-4980 Msa1419690:CDS 45.0%
!! AAGATGATGATGGTACCGAG+TGG + tig0024723:5080-5099 Msa1419690:CDS 45.0%
!! AGATGATGATGGTACCGAGT+GGG + tig0024723:5081-5100 Msa1419690:CDS 45.0%
AAGTTGCAGAGGTTCAGCTT+GGG + tig0024723:5504-5523 Msa1419690:intron 45.0%
! CTTGGATGACTTTGAGAGCA+TGG - tig0024723:6078-6097 None:intergenic 45.0%
!! TTGGGCTGGTTGTAATTCCT+CGG + tig0024723:6105-6124 Msa1419690:intron 45.0%
!! TCCTCGGTTGGTTTGGAATA+TGG + tig0024723:6121-6140 Msa1419690:intron 45.0%
ACCATATTCCAAACCAACCG+AGG - tig0024723:6125-6144 None:intergenic 45.0%
AAGCACAGATTGCCTTAGCA+TGG - tig0024723:6192-6211 None:intergenic 45.0%
! GTGTGGCGGCTTTTGTAATT+GGG + tig0024723:6228-6247 Msa1419690:intron 45.0%
CAACAACACCATTCATGCCA+TGG - tig0024723:6338-6357 None:intergenic 45.0%
!! CATGGCATGAATGGTGTTGT+TGG + tig0024723:6336-6355 Msa1419690:intron 45.0%
CTCTCAGAAAATGGGAGAGT+AGG + tig0024723:6395-6414 Msa1419690:intron 45.0%
CACTTAATAGGGATGGAAGG+CGG + tig0024723:6452-6471 Msa1419690:intron 45.0%
TGGGTCCCTAATTTCTGATC+TGG + tig0024723:6787-6806 Msa1419690:intron 45.0%
GGGTCCCTAATTTCTGATCT+GGG + tig0024723:6788-6807 Msa1419690:intron 45.0%
TGCAATTGGAGCTTACAAGG+TGG + tig0024723:6829-6848 Msa1419690:CDS 45.0%
CCATAGGTAAAACGTTGGGA+TGG - tig0024723:7293-7312 None:intergenic 45.0%
! CCATCCCAACGTTTTACCTA+TGG + tig0024723:7290-7309 Msa1419690:three_prime_UTR 45.0%
!!! ATAATATATATTTTAGAAAA+TGG + tig0024723:6041-6060 Msa1419690:intron 5.0%
AAGTTAGCTGCTCAAGACGG+GGG + tig0024723:829-848 Msa1419690:CDS 50.0%
GGACATGCTTCAGAAGATGG+AGG + tig0024723:906-925 Msa1419690:CDS 50.0%
AGCAACTAGAAAGAGCCAGG+AGG + tig0024723:1421-1440 Msa1419690:intron 50.0%
AAGACAGGGATATAGCCTCC+TGG - tig0024723:1439-1458 None:intergenic 50.0%
CCCCTACCAAATGGAAGACA+GGG - tig0024723:1453-1472 None:intergenic 50.0%
CCCTGTCTTCCATTTGGTAG+GGG + tig0024723:1450-1469 Msa1419690:intron 50.0%
TCCCCTACCAAATGGAAGAC+AGG - tig0024723:1454-1473 None:intergenic 50.0%
! GTGACAGGGCATTTGATGAG+TGG + tig0024723:1680-1699 Msa1419690:intron 50.0%
GTATCTCCGCTGTATGGCAA+TGG - tig0024723:2497-2516 None:intergenic 50.0%
ACCTTGGTATCTCCGCTGTA+TGG - tig0024723:2503-2522 None:intergenic 50.0%
TAACCATGCCAACTAGCTGC+TGG + tig0024723:2727-2746 Msa1419690:intron 50.0%
TAACCAGCAGCTAGTTGGCA+TGG - tig0024723:2733-2752 None:intergenic 50.0%
TCGGTTAACCAGCAGCTAGT+TGG - tig0024723:2738-2757 None:intergenic 50.0%
!! AACCGACTTGCAGAACCTCT+AGG + tig0024723:2752-2771 Msa1419690:intron 50.0%
CACCTAGAGGTTCTGCAAGT+CGG - tig0024723:2757-2776 None:intergenic 50.0%
! TGGATCTCTTCCCCCCATTT+TGG + tig0024723:2839-2858 Msa1419690:intron 50.0%
AGAGGGAATGCACAGCTAAG+AGG - tig0024723:2877-2896 None:intergenic 50.0%
CTTAGCTGTGCATTCCCTCT+AGG + tig0024723:2877-2896 Msa1419690:intron 50.0%
GGTCTCTCTGCCTTACAAGT+AGG - tig0024723:3682-3701 None:intergenic 50.0%
! TGGATCTCTTCCCCCCATTT+TGG + tig0024723:2839-2858 Msa1419690:intron 50.0%
ACTATAGGCTCGTGGGATAG+AGG + tig0024723:3863-3882 Msa1419690:intron 50.0%
CTATAGGCTCGTGGGATAGA+GGG + tig0024723:3864-3883 Msa1419690:intron 50.0%
GTGGGATAGAGGGAAACTGT+TGG + tig0024723:3874-3893 Msa1419690:intron 50.0%
GGAAACTGTTGGAAGGGAGA+GGG + tig0024723:3885-3904 Msa1419690:intron 50.0%
GAAACTGTTGGAAGGGAGAG+GGG + tig0024723:3886-3905 Msa1419690:intron 50.0%
GACAGGTGGCATTTGATGAG+TGG + tig0024723:3923-3942 Msa1419690:intron 50.0%
TTGGATAGGTGAGAGGTCGA+TGG + tig0024723:3971-3990 Msa1419690:intron 50.0%
TGGATAGGTGAGAGGTCGAT+GGG + tig0024723:3972-3991 Msa1419690:intron 50.0%
ATAAGGAAGGGGGAGAACCT+TGG + tig0024723:4112-4131 Msa1419690:intron 50.0%
ACAACTTTACCGTTGCGCCA+AGG - tig0024723:4132-4151 None:intergenic 50.0%
AAGGTCACAGGTTCAAGTCC+TGG + tig0024723:4166-4185 Msa1419690:intron 50.0%
CTATATCTCCCGCATACGCA+GGG - tig0024723:4251-4270 None:intergenic 50.0%
ACTATATCTCCCGCATACGC+AGG - tig0024723:4252-4271 None:intergenic 50.0%
TAGTACCTATCTCTCGGAGG+AGG + tig0024723:4399-4418 Msa1419690:intron 50.0%
! TGGTACTGAAGGCAAAGGAG+AGG + tig0024723:4572-4591 Msa1419690:CDS 50.0%
! GGTACTGAAGGCAAAGGAGA+GGG + tig0024723:4573-4592 Msa1419690:CDS 50.0%
TACGAAAGAACAGCGTGGAG+AGG + tig0024723:4668-4687 Msa1419690:CDS 50.0%
AACTTGTGCGTGCCTTTGAG+AGG - tig0024723:4869-4888 None:intergenic 50.0%
ATCTGCTGCGTTCGCATCTT+GGG - tig0024723:5005-5024 None:intergenic 50.0%
!! CGGTTGGAAGTACTGCTAGA+AGG - tig0024723:5031-5050 None:intergenic 50.0%
AGTACTTCCAACCGCCAAGT+TGG + tig0024723:5037-5056 Msa1419690:CDS 50.0%
TTTCAAGCCAACTTGGCGGT+TGG - tig0024723:5047-5066 None:intergenic 50.0%
GAGAGAAGACCAAGTTGCAG+AGG + tig0024723:5493-5512 Msa1419690:intron 50.0%
CAAGCTGAACCTCTGCAACT+TGG - tig0024723:5505-5524 None:intergenic 50.0%
CAAGTTGCAGAGGTTCAGCT+TGG + tig0024723:5503-5522 Msa1419690:intron 50.0%
GCTGGTTGTAATTCCTCGGT+TGG + tig0024723:6109-6128 Msa1419690:intron 50.0%
TTGCAGCTGTTGCCATGCTA+AGG + tig0024723:6177-6196 Msa1419690:intron 50.0%
! GGTGTGGCGGCTTTTGTAAT+TGG + tig0024723:6227-6246 Msa1419690:intron 50.0%
TTGAGTGGCCATGGCATGAA+TGG + tig0024723:6327-6346 Msa1419690:intron 50.0%
!! ATGAATGGTGTTGTTGGCCG+TGG + tig0024723:6342-6361 Msa1419690:intron 50.0%
!! TGGCGATGGGGTCATTTTGT+AGG + tig0024723:6571-6590 Msa1419690:intron 50.0%
! GTCTTCTTCTGGCTGAGCAT+CGG - tig0024723:6870-6889 None:intergenic 50.0%
TTGCGCGTGTGTGAGAGTTG+TGG + tig0024723:118-137 Msa1419690:intron 55.0%
GCTACAGCTGAAGCTACGAC+AGG + tig0024723:242-261 Msa1419690:CDS 55.0%
GTCTCGGGCCTTTCCTAAAG+TGG - tig0024723:1580-1599 None:intergenic 55.0%
! GGAGCACCATTGCCATACAG+CGG + tig0024723:2488-2507 Msa1419690:CDS 55.0%
GCCATACAGCGGAGATACCA+AGG + tig0024723:2499-2518 Msa1419690:CDS 55.0%
GGGAAACTGTTGGAAGGGAG+AGG + tig0024723:3884-3903 Msa1419690:intron 55.0%
ACATAGCAGAGCAGGACAGG+TGG + tig0024723:3909-3928 Msa1419690:intron 55.0%
GTGAGAGGTCGATGGGAGTT+AGG + tig0024723:3979-3998 Msa1419690:intron 55.0%
TACCTATCTCTCGGAGGAGG+TGG + tig0024723:4402-4421 Msa1419690:intron 55.0%
TCCTTGTCCCTGCCTCTCAA+AGG + tig0024723:4854-4873 Msa1419690:intron 55.0%
TCTGCTGCGTTCGCATCTTG+GGG - tig0024723:5004-5023 None:intergenic 55.0%
CATCTGCTGCGTTCGCATCT+TGG - tig0024723:5006-5025 None:intergenic 55.0%
! TGATGGTACCGAGTGGGAAG+AGG + tig0024723:5087-5106 Msa1419690:CDS 55.0%
AACAGGAGCCTCTTCCCACT+CGG - tig0024723:5098-5117 None:intergenic 55.0%
TCAGCCAGAAGAAGACGACG+AGG + tig0024723:6874-6893 Msa1419690:CDS 55.0%
TCGTCCTCGTCGTCTTCTTC+TGG - tig0024723:6881-6900 None:intergenic 55.0%
ACGACGAGGACGATATCGAC+TGG + tig0024723:6888-6907 Msa1419690:CDS 55.0%
! CGACGAGGACGATATCGACT+GGG + tig0024723:6889-6908 Msa1419690:CDS 55.0%
! GACGATATCGACTGGGAGGA+AGG + tig0024723:6896-6915 Msa1419690:CDS 55.0%
! CAGCTAACTCCGGTCTTGTG+TGG - tig0024723:7031-7050 None:intergenic 55.0%
GTTGCCTGTGCATGTTGCTG+TGG + tig0024723:7062-7081 Msa1419690:three_prime_UTR 55.0%
ATCGCCACAGCAACATGCAC+AGG - tig0024723:7069-7088 None:intergenic 55.0%
GCGATACGTCCGTGGTTTGA+GGG + tig0024723:7084-7103 Msa1419690:three_prime_UTR 55.0%
CGATACGTCCGTGGTTTGAG+GGG + tig0024723:7085-7104 Msa1419690:three_prime_UTR 55.0%
GTACACCTCCCCTCAAACCA+CGG - tig0024723:7096-7115 None:intergenic 55.0%
AAGCCCGAGCTAGTGCAGCT+GGG + tig0024723:2411-2430 Msa1419690:CDS 60.0%
GAGAGGGGACATAGCAGAGC+AGG + tig0024723:3901-3920 Msa1419690:intron 60.0%
GGGACATAGCAGAGCAGGAC+AGG + tig0024723:3906-3925 Msa1419690:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + tig0024723:4224-4243 Msa1419690:intron 60.0%
AGCCACCTCCTCCGAGAGAT+AGG - tig0024723:4407-4426 None:intergenic 60.0%
ACAGCGTGGAGAGGTGAAGC+AGG + tig0024723:4677-4696 Msa1419690:CDS 60.0%
! GCCTTTGAGAGGCAGGGACA+AGG - tig0024723:4858-4877 None:intergenic 60.0%
! GTGCGTGCCTTTGAGAGGCA+GGG - tig0024723:4864-4883 None:intergenic 60.0%
! TGTGCGTGCCTTTGAGAGGC+AGG - tig0024723:4865-4884 None:intergenic 60.0%
! CGAGGACGATATCGACTGGG+AGG + tig0024723:6892-6911 Msa1419690:CDS 60.0%
TTGCTGTGGCGATACGTCCG+TGG + tig0024723:7076-7095 Msa1419690:three_prime_UTR 60.0%
GGCGATACGTCCGTGGTTTG+AGG + tig0024723:7083-7102 Msa1419690:three_prime_UTR 60.0%
TACGTCCGTGGTTTGAGGGG+AGG + tig0024723:7088-7107 Msa1419690:three_prime_UTR 60.0%
GCTGCTCAAGACGGGGGAGA+TGG + tig0024723:835-854 Msa1419690:CDS 65.0%
GCTCAAGACGGGGGAGATGG+AGG + tig0024723:838-857 Msa1419690:CDS 65.0%
GACGGGGGAGATGGAGGAGA+TGG + tig0024723:844-863 Msa1419690:CDS 65.0%
GAAGCCCGAGCTAGTGCAGC+TGG + tig0024723:2410-2429 Msa1419690:CDS 65.0%
ACGCCCAGCTGCACTAGCTC+GGG - tig0024723:2417-2436 None:intergenic 65.0%
CACGCCCAGCTGCACTAGCT+CGG - tig0024723:2418-2437 None:intergenic 65.0%
GCAGCTGGGCGTGCAGCTAA+TGG + tig0024723:2425-2444 Msa1419690:CDS 65.0%
GGGGGAGAACCTTGGCGCAA+CGG + tig0024723:4120-4139 Msa1419690:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - tig0024723:4226-4245 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - tig0024723:4239-4258 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - tig0024723:4240-4259 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + tig0024723:4239-4258 Msa1419690:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + tig0024723:4240-4259 Msa1419690:intron 65.0%
TCTCCCGCATACGCAGGGTC+CGG - tig0024723:4246-4265 None:intergenic 65.0%
CGCATACGCAGGGTCCGGGA+AGG - tig0024723:4241-4260 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - tig0024723:4245-4264 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0024723 gene 118 7352 118 ID=Msa1419690;Name=Msa1419690
tig0024723 mRNA 118 7352 118 ID=Msa1419690-mRNA-1;Parent=Msa1419690;Name=Msa1419690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.71|0.62|0.87|1|0.87|8|430|375
tig0024723 exon 118 123 118 ID=Msa1419690-mRNA-1:exon:1040;Parent=Msa1419690-mRNA-1
tig0024723 exon 203 328 203 ID=Msa1419690-mRNA-1:exon:1041;Parent=Msa1419690-mRNA-1
tig0024723 exon 507 616 507 ID=Msa1419690-mRNA-1:exon:1042;Parent=Msa1419690-mRNA-1
tig0024723 exon 735 927 735 ID=Msa1419690-mRNA-1:exon:1043;Parent=Msa1419690-mRNA-1
tig0024723 exon 2329 2520 2329 ID=Msa1419690-mRNA-1:exon:1044;Parent=Msa1419690-mRNA-1
tig0024723 exon 4555 4764 4555 ID=Msa1419690-mRNA-1:exon:1045;Parent=Msa1419690-mRNA-1
tig0024723 exon 4929 5121 4929 ID=Msa1419690-mRNA-1:exon:1046;Parent=Msa1419690-mRNA-1
tig0024723 exon 6825 7352 6825 ID=Msa1419690-mRNA-1:exon:1047;Parent=Msa1419690-mRNA-1
tig0024723 CDS 118 123 118 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 CDS 203 328 203 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 CDS 507 616 507 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 CDS 735 927 735 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 CDS 2329 2520 2329 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 CDS 4555 4764 4555 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 CDS 4929 5121 4929 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 CDS 6825 6922 6825 ID=Msa1419690-mRNA-1:cds;Parent=Msa1419690-mRNA-1
tig0024723 three_prime_UTR 6923 7352 6923 ID=Msa1419690-mRNA-1:three_prime_utr;Parent=Msa1419690-mRNA-1
Gene Sequence

>Msa1419690

TTGCGCACAGCAAAAGGTGCAAAAATATACAGCGCTGCTGTAGCTGCTACAGCTGAAGCTACGACAGGAAAAGAGGGAGAAGAAAAGGTCAAGCTACACACACACTCTTACTGCTGTCTAGATTATGCACAGATATATGATGTGGTTAGGTACAGACTGCATCGCATGAAGCATAAGCTGAAAGATGAATTAGAGAACAAGAACACCATTCAGGAATATATATGTACAAACTGTGGCAAAAGATACAATGCTTTGGATGCACTGCGGTTAATATCTTTTGAAGACGAGGACTTCCACTGTGAACGTTGTAATGGAAAACTAGAGGTTGAAAGTGATAAGTTAGCTGCTCAAGACGGGGGAGATGGAGGAGATGGAGATGAGAATGCACGAAGACGACGGCGTGAAAAGTTAAAGGACATGCTTCAGAAGATGGAGGTACAACTCAAGCCTTTAGTAGATCAAGTCAGTCGGGTAAAAGACTTGCCTGTTCCAGAATTTGGTAGTCTTCAAGCTTGGGAAGCCCGAGCTAGTGCAGCTGGGCGTGCAGCTAATGGAGATAATGCTGGTGATTCTAAATCTCATCTGGGATATAATGGAGCACCATTGCCATACAGCGGAGATACCAAGGTGGTAGTTGACTTCAATGGTACTGAAGGCAAAGGAGAGGGTGTTAAATCTGAAACTGACGGTACATCTTTAAAGGTTTTGCCTCCATGGATGATTACATCAGGTATGAATCTTACGAAAGAACAGCGTGGAGAGGTGAAGCAGGAAACAAAAATGGACGGGACTTCAACTTCCACATCAGTGCAATTCACAGACGATAAAAAGTCAACAGATGAGTATGTCAAGGCTTATTACGCTGCTTTGCTTAAGAAGCAACGCGAATTGGAAGAAGCTGCAAAAAATCCCCAAGATGCGAACGCAGCAGATGATCCTTCTAGCAGTACTTCCAACCGCCAAGTTGGCTTGAAATCAAAACGTGAGGAAGATGATGATGGTACCGAGTGGGAAGAGGCTCCTGTTAGAGGAAATGCAATTGGAGCTTACAAGGTGGATTTGAATGTTGAAGCCGATGCTCAGCCAGAAGAAGACGACGAGGACGATATCGACTGGGAGGAAGGCTGA

Protein sequence

>Msa1419690

LRTAKGAKIYSAAVAATAEATTGKEGEEKVKLHTHSYCCLDYAQIYDVVRYRLHRMKHKLKDELENKNTIQEYICTNCGKRYNALDALRLISFEDEDFHCERCNGKLEVESDKLAAQDGGDGGDGDENARRRRREKLKDMLQKMEVQLKPLVDQVSRVKDLPVPEFGSLQAWEARASAAGRAANGDNAGDSKSHLGYNGAPLPYSGDTKVVVDFNGTEGKGEGVKSETDGTSLKVLPPWMITSGMNLTKEQRGEVKQETKMDGTSTSTSVQFTDDKKSTDEYVKAYYAALLKKQRELEEAAKNPQDANAADDPSSSTSNRQVGLKSKREEDDDGTEWEEAPVRGNAIGAYKVDLNVEADAQPEEDDEDDIDWEEG*