Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000676.t1 | XP_003620976.1 | 98.1 | 106 | 2 | 0 | 1 | 106 | 1 | 106 | 5.80E-51 | 210.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000676.t1 | Q39236 | 91.3 | 104 | 9 | 0 | 1 | 104 | 1 | 104 | 2.7e-49 | 196.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000676.t1 | B7FH46 | 98.1 | 106 | 2 | 0 | 1 | 106 | 1 | 106 | 4.2e-51 | 210.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76728 | MS.gene000676 | PPI |
| MS.gene000676 | MS.gene052074 | PPI |
| MS.gene000676 | MS.gene45536 | PPI |
| MS.gene000676 | MS.gene78402 | PPI |
| MS.gene87743 | MS.gene000676 | PPI |
| MS.gene000676 | MS.gene82237 | PPI |
| MS.gene000676 | MS.gene77045 | PPI |
| MS.gene000676 | MS.gene31113 | PPI |
| MS.gene87064 | MS.gene000676 | PPI |
| MS.gene000676 | MS.gene42075 | PPI |
| MS.gene000676 | MS.gene48819 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000676.t1 | MTR_7g005540 | 98.113 | 106 | 2 | 0 | 1 | 106 | 1 | 106 | 3.48e-75 | 219 |
| MS.gene000676.t1 | MTR_5g066740 | 87.500 | 104 | 13 | 0 | 1 | 104 | 7 | 110 | 4.16e-66 | 196 |
| MS.gene000676.t1 | MTR_7g005540 | 100.000 | 60 | 0 | 0 | 1 | 60 | 1 | 60 | 2.72e-37 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000676.t1 | AT4G24440 | 91.346 | 104 | 9 | 0 | 1 | 104 | 1 | 104 | 1.51e-69 | 205 |
| MS.gene000676.t1 | AT4G24440 | 91.346 | 104 | 9 | 0 | 1 | 104 | 1 | 104 | 1.51e-69 | 205 |
Find 23 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTCCTGAGATTGCGATTC+AGG | 0.222867 | 7.3:-82328305 | MS.gene000676:CDS |
| AATGTGCCTCACTGAGACTT+TGG | 0.433161 | 7.3:-82328353 | MS.gene000676:CDS |
| ATTGTGATTAGACAATTATC+TGG | 0.433788 | 7.3:+82324836 | None:intergenic |
| GTAGTCTATGACTGAAGCTC+TGG | 0.460011 | 7.3:-82328166 | MS.gene000676:intron |
| TTAGGGCAGCCTTGTGTGCA+AGG | 0.462107 | 7.3:+82324879 | None:intergenic |
| ATTGAAAGAGAAGATACAAA+AGG | 0.468041 | 7.3:-82324921 | MS.gene000676:CDS |
| GGTTCTCGTTCAGTTTGATA+AGG | 0.472558 | 7.3:-82328284 | MS.gene000676:intron |
| CAAAGCATCTTGTAAGATGA+AGG | 0.489651 | 7.3:+82325465 | None:intergenic |
| TAACCCGTCCAACATTCTCT+TGG | 0.494051 | 7.3:+82325425 | None:intergenic |
| CACTGAGACTTTGGACGAGA+TGG | 0.495885 | 7.3:-82328344 | MS.gene000676:CDS |
| AGAACCTGAATCGCAATCTC+AGG | 0.497392 | 7.3:+82328301 | None:intergenic |
| TAAAAGCAAGGTCTCTATCA+AGG | 0.505886 | 7.3:-82328133 | MS.gene000676:intron |
| AGATGATAGCCTTGCACACA+AGG | 0.527665 | 7.3:-82324888 | MS.gene000676:CDS |
| TGTTGGACGGGTTAAAATAG+TGG | 0.534469 | 7.3:-82325416 | MS.gene000676:CDS |
| AGACAATTATCTGGCGTGAA+AGG | 0.536018 | 7.3:+82324845 | None:intergenic |
| CTTTATCGTAGGTCGACAAT+CGG | 0.550857 | 7.3:-82328376 | MS.gene000676:CDS |
| GAAGACAACCAAGAGAATGT+TGG | 0.561206 | 7.3:-82325433 | MS.gene000676:CDS |
| TTGGACGAGATGGTTCAGAA+TGG | 0.589806 | 7.3:-82328334 | MS.gene000676:CDS |
| CAACCAAGAGAATGTTGGAC+GGG | 0.592439 | 7.3:-82325428 | MS.gene000676:CDS |
| GGAAACACAAGTTAAAAGCA+AGG | 0.611187 | 7.3:-82328145 | MS.gene000676:CDS |
| ACAACCAAGAGAATGTTGGA+CGG | 0.645466 | 7.3:-82325429 | MS.gene000676:CDS |
| CGACGTTCGAACTTTATCGT+AGG | 0.648273 | 7.3:-82328387 | MS.gene000676:CDS |
| TCTCGTCCAAAGTCTCAGTG+AGG | 0.751939 | 7.3:+82328347 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTGAATAAATTCTT+TGG | - | chr7.3:82326252-82326271 | MS.gene000676:intron | 10.0% |
| !! | ATTTATTGAATAAATTCTTT+GGG | - | chr7.3:82326253-82326272 | MS.gene000676:intron | 10.0% |
| !! | TATGTTATTATAGATTTAAA+AGG | - | chr7.3:82327979-82327998 | MS.gene000676:intron | 10.0% |
| !! | TTTATTGAATAAATTCTTTG+GGG | - | chr7.3:82326254-82326273 | MS.gene000676:intron | 15.0% |
| !! | TTTGATGTGTAATTAAAATT+TGG | + | chr7.3:82325776-82325795 | None:intergenic | 15.0% |
| !!! | AAACAAATTTATTTTTCTCT+GGG | - | chr7.3:82328160-82328179 | MS.gene000676:CDS | 15.0% |
| !!! | AAACATAAAAAGATGTTTTA+AGG | + | chr7.3:82327566-82327585 | None:intergenic | 15.0% |
| !!! | TAAACAAATTTATTTTTCTC+TGG | - | chr7.3:82328159-82328178 | MS.gene000676:CDS | 15.0% |
| !!! | TACCTTTTTACTTAATTTTT+TGG | - | chr7.3:82326863-82326882 | MS.gene000676:intron | 15.0% |
| !! | AATAATAACTTGAAGATTGA+AGG | + | chr7.3:82328005-82328024 | None:intergenic | 20.0% |
| !! | AGCCAAAAAATTAAGTAAAA+AGG | + | chr7.3:82326868-82326887 | None:intergenic | 20.0% |
| !! | ATAATCATGAGTAAAAAGTA+TGG | + | chr7.3:82326957-82326976 | None:intergenic | 20.0% |
| !! | ATTAAGTAAAAAGGTAATTG+TGG | + | chr7.3:82326859-82326878 | None:intergenic | 20.0% |
| !! | TAAAATTCTTGTACGTAATA+GGG | - | chr7.3:82327225-82327244 | MS.gene000676:intron | 20.0% |
| !! | TAGTACAAAATGTTGTTAAA+TGG | + | chr7.3:82327271-82327290 | None:intergenic | 20.0% |
| !! | TATTTGCATTATCTTCTATT+TGG | - | chr7.3:82326686-82326705 | MS.gene000676:intron | 20.0% |
| !! | TTAAAATTCTTGTACGTAAT+AGG | - | chr7.3:82327224-82327243 | MS.gene000676:intron | 20.0% |
| !! | TTAAGTAAAAAGGTAATTGT+GGG | + | chr7.3:82326858-82326877 | None:intergenic | 20.0% |
| !! | TTACATTTAGAAATTCCTTA+TGG | - | chr7.3:82326624-82326643 | MS.gene000676:intron | 20.0% |
| !!! | ACATCAAATAATAATTTTCC+GGG | - | chr7.3:82325788-82325807 | MS.gene000676:intron | 20.0% |
| !!! | CACATCAAATAATAATTTTC+CGG | - | chr7.3:82325787-82325806 | MS.gene000676:intron | 20.0% |
| !!! | CTTATTATTTTAATTGCATG+TGG | - | chr7.3:82325029-82325048 | MS.gene000676:intron | 20.0% |
| !!! | TTCATTCAAGGTTTAATTTT+TGG | - | chr7.3:82326720-82326739 | MS.gene000676:intron | 20.0% |
| !!! | TTTTTACCTTTCAATTCAAT+GGG | - | chr7.3:82325638-82325657 | MS.gene000676:intron | 20.0% |
| ! | ATAACAGTCATATATGTCAA+TGG | + | chr7.3:82326985-82327004 | None:intergenic | 25.0% |
| ! | ATGACATGTTTCAGTATAAA+GGG | + | chr7.3:82325941-82325960 | None:intergenic | 25.0% |
| ! | ATTCAGTTACAAATCCTATT+TGG | + | chr7.3:82326225-82326244 | None:intergenic | 25.0% |
| ! | ATTGAAAGAGAAGATACAAA+AGG | - | chr7.3:82328302-82328321 | MS.gene000676:CDS | 25.0% |
| ! | ATTGTGATTAGACAATTATC+TGG | + | chr7.3:82328390-82328409 | None:intergenic | 25.0% |
| ! | ATTGTTAAGATTGTCTAGTA+GGG | - | chr7.3:82325178-82325197 | MS.gene000676:intron | 25.0% |
| ! | CTATAATTCACCATCAAATT+TGG | + | chr7.3:82326180-82326199 | None:intergenic | 25.0% |
| ! | GAAACTAAGTAAACTATTGT+TGG | - | chr7.3:82327072-82327091 | MS.gene000676:intron | 25.0% |
| ! | GAGATTTAAAGAGATTGAAT+TGG | - | chr7.3:82326821-82326840 | MS.gene000676:intron | 25.0% |
| ! | GTTTGTACTAGGAATAAATA+TGG | + | chr7.3:82326449-82326468 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTTAAATGG+AGG | + | chr7.3:82327268-82327287 | None:intergenic | 25.0% |
| ! | TAGAATTGTCTGATAAAAAC+TGG | - | chr7.3:82326197-82326216 | MS.gene000676:intron | 25.0% |
| ! | TAGTCATCGTTATAAATGTA+TGG | - | chr7.3:82328205-82328224 | MS.gene000676:intron | 25.0% |
| ! | TATTGTTAAGATTGTCTAGT+AGG | - | chr7.3:82325177-82325196 | MS.gene000676:intron | 25.0% |
| ! | TCATAAAGAAATACTATGCA+AGG | + | chr7.3:82326579-82326598 | None:intergenic | 25.0% |
| ! | TCGTTATAAATGTATGGTTA+TGG | - | chr7.3:82328211-82328230 | MS.gene000676:intron | 25.0% |
| ! | TGTTGAAAAACCAAATTTGA+TGG | - | chr7.3:82326167-82326186 | MS.gene000676:intron | 25.0% |
| ! | TTAAAGAGATTGAATTGGTA+TGG | - | chr7.3:82326826-82326845 | MS.gene000676:intron | 25.0% |
| ! | TTACATTGAGAATATCACTT+GGG | - | chr7.3:82328037-82328056 | MS.gene000676:intron | 25.0% |
| !! | ATAGAAGATTAATTTGACTG+TGG | - | chr7.3:82327482-82327501 | MS.gene000676:intron | 25.0% |
| !! | ATCTTTTGTTAGATAGTGTA+AGG | - | chr7.3:82325124-82325143 | MS.gene000676:intron | 25.0% |
| !! | CTTTTTACCTTTCAATTCAA+TGG | - | chr7.3:82325637-82325656 | MS.gene000676:intron | 25.0% |
| !! | TAAAATTTGGTTTAAGCCAT+TGG | + | chr7.3:82325763-82325782 | None:intergenic | 25.0% |
| !! | TAGAAGATTAATTTGACTGT+GGG | - | chr7.3:82327483-82327502 | MS.gene000676:intron | 25.0% |
| !! | TCTCATAGTTTGGAATAAAT+CGG | + | chr7.3:82325672-82325691 | None:intergenic | 25.0% |
| !! | TTCATCTCATTAGTTTGAAT+TGG | + | chr7.3:82325360-82325379 | None:intergenic | 25.0% |
| !!! | AAAAAGATGTTTTAAGGTGT+TGG | + | chr7.3:82327560-82327579 | None:intergenic | 25.0% |
| !!! | AAAAGATGTTTTAAGGTGTT+GGG | + | chr7.3:82327559-82327578 | None:intergenic | 25.0% |
| !!! | TTTTCAAGAGATTCTTAAAC+CGG | + | chr7.3:82325892-82325911 | None:intergenic | 25.0% |
| !!! | TTTTTTCCATCTCTTTTTGA+GGG | - | chr7.3:82327041-82327060 | MS.gene000676:intron | 25.0% |
| AATGAGATGAAGTTTACCTA+GGG | - | chr7.3:82325369-82325388 | MS.gene000676:intron | 30.0% | |
| ACAATTTAAGTCCACAAATC+AGG | - | chr7.3:82326070-82326089 | MS.gene000676:intron | 30.0% | |
| ACACAGAACTAAAATTACAC+AGG | - | chr7.3:82326313-82326332 | MS.gene000676:intron | 30.0% | |
| ACTATACCACTATAATGTAG+CGG | + | chr7.3:82327332-82327351 | None:intergenic | 30.0% | |
| ATACAACTGTTAACACACAA+AGG | + | chr7.3:82326014-82326033 | None:intergenic | 30.0% | |
| ATTTAGAAATTCCTTATGGC+GGG | - | chr7.3:82326628-82326647 | MS.gene000676:intron | 30.0% | |
| ATTTGTTTACATAGAGCTCA+TGG | + | chr7.3:82328148-82328167 | None:intergenic | 30.0% | |
| CATTGAGCAACAAATATACA+AGG | + | chr7.3:82325250-82325269 | None:intergenic | 30.0% | |
| CATTTAGAAATTCCTTATGG+CGG | - | chr7.3:82326627-82326646 | MS.gene000676:intron | 30.0% | |
| CTAGAACAAAGATTGAAAAC+AGG | - | chr7.3:82328253-82328272 | MS.gene000676:intron | 30.0% | |
| GAAAGTTTGTGAATGAGTTT+CGG | + | chr7.3:82325852-82325871 | None:intergenic | 30.0% | |
| GATAAAAACTGGTACCAAAT+AGG | - | chr7.3:82326208-82326227 | MS.gene000676:intron | 30.0% | |
| GATGACATGTTTCAGTATAA+AGG | + | chr7.3:82325942-82325961 | None:intergenic | 30.0% | |
| GATTGAGCCAAAAATATACA+AGG | + | chr7.3:82325282-82325301 | None:intergenic | 30.0% | |
| GCATAGTATTTCTTTATGAG+AGG | - | chr7.3:82326580-82326599 | MS.gene000676:intron | 30.0% | |
| GGAAGTCATGACAAAAAAAA+TGG | + | chr7.3:82326936-82326955 | None:intergenic | 30.0% | |
| GGTTTAAGAATCTCTTGAAA+AGG | - | chr7.3:82325891-82325910 | MS.gene000676:intron | 30.0% | |
| GTTACATTGAGAATATCACT+TGG | - | chr7.3:82328036-82328055 | MS.gene000676:intron | 30.0% | |
| GTTATTGTAGAATTATTGCG+TGG | + | chr7.3:82326408-82326427 | None:intergenic | 30.0% | |
| TAAAATCAAAGTCGAGGATA+TGG | + | chr7.3:82325733-82325752 | None:intergenic | 30.0% | |
| TAAACTATTGTTGGATAGCA+AGG | - | chr7.3:82327081-82327100 | MS.gene000676:intron | 30.0% | |
| TAATAACATAGTGTAGATGC+TGG | + | chr7.3:82327969-82327988 | None:intergenic | 30.0% | |
| TAATGAGATGAAGTTTACCT+AGG | - | chr7.3:82325368-82325387 | MS.gene000676:intron | 30.0% | |
| TGGAAGAACATGAAAAAATG+AGG | + | chr7.3:82325821-82325840 | None:intergenic | 30.0% | |
| TGTGCAGTTAGTATCTATTA+TGG | + | chr7.3:82326513-82326532 | None:intergenic | 30.0% | |
| TTGTACTAAATAACGTATCG+TGG | - | chr7.3:82327283-82327302 | MS.gene000676:intron | 30.0% | |
| TTGTTAAATAGCAGCTATAG+TGG | + | chr7.3:82327356-82327375 | None:intergenic | 30.0% | |
| TTGTTAAATGGAGGATATAG+TGG | + | chr7.3:82327259-82327278 | None:intergenic | 30.0% | |
| TTTATTCCAAACTATGAGAG+AGG | - | chr7.3:82325673-82325692 | MS.gene000676:intron | 30.0% | |
| TTTCTATCGTATTGTCAACA+AGG | - | chr7.3:82327868-82327887 | MS.gene000676:intron | 30.0% | |
| ! | ACACAAAGGTATATTGTAGA+GGG | + | chr7.3:82326000-82326019 | None:intergenic | 30.0% |
| ! | ACAGATTTTGTGACAATGTT+TGG | - | chr7.3:82327734-82327753 | MS.gene000676:intron | 30.0% |
| ! | AGAAAAACTGAAACTGACTT+TGG | + | chr7.3:82326555-82326574 | None:intergenic | 30.0% |
| ! | GCATATTTTCTGTTTGTACT+AGG | + | chr7.3:82326460-82326479 | None:intergenic | 30.0% |
| ! | GTGTTCTTTATTTATCAGCA+TGG | + | chr7.3:82326052-82326071 | None:intergenic | 30.0% |
| ! | TTGATTTTACTTGGATCCAA+TGG | - | chr7.3:82325744-82325763 | MS.gene000676:intron | 30.0% |
| !! | ATCTTTGTTCTAGAGTCATT+AGG | + | chr7.3:82328246-82328265 | None:intergenic | 30.0% |
| !! | GTATCAGTTTTTCAATCCAA+TGG | - | chr7.3:82325600-82325619 | MS.gene000676:intron | 30.0% |
| !! | TACTGAGCCTTGTATATTTT+TGG | - | chr7.3:82325272-82325291 | MS.gene000676:intron | 30.0% |
| !!! | AGTGTAAGGTGTTGATTTTT+TGG | - | chr7.3:82325138-82325157 | MS.gene000676:intron | 30.0% |
| !!! | ATTTTTTGGCTCTAAACATG+AGG | - | chr7.3:82326877-82326896 | MS.gene000676:intron | 30.0% |
| !!! | GTTTTTTCCATCTCTTTTTG+AGG | - | chr7.3:82327040-82327059 | MS.gene000676:intron | 30.0% |
| AAAAAATGAGGAAGAGAACC+CGG | + | chr7.3:82325809-82325828 | None:intergenic | 35.0% | |
| AACGTATCGTGGAACAATAA+CGG | - | chr7.3:82327294-82327313 | MS.gene000676:intron | 35.0% | |
| AAGAATCTCTTGAAAAGGTG+TGG | - | chr7.3:82325896-82325915 | MS.gene000676:intron | 35.0% | |
| AGAATTATTGCGTGGTTAAC+TGG | + | chr7.3:82326400-82326419 | None:intergenic | 35.0% | |
| ATGAGATCGTATAGTGCAAA+AGG | + | chr7.3:82327020-82327039 | None:intergenic | 35.0% | |
| CAAATTCCGCTACATTATAG+TGG | - | chr7.3:82327323-82327342 | MS.gene000676:intron | 35.0% | |
| CAGTTTGATAAGGTAGGTTT+CGG | - | chr7.3:82324949-82324968 | MS.gene000676:intron | 35.0% | |
| CCAACTTTACGAATCTCTAA+AGG | + | chr7.3:82325974-82325993 | None:intergenic | 35.0% | |
| CCACAAATCAGGATCAAATA+GGG | - | chr7.3:82326081-82326100 | MS.gene000676:intron | 35.0% | |
| GAACACTCAGAGTAAAGAAA+AGG | + | chr7.3:82327672-82327691 | None:intergenic | 35.0% | |
| GGAAACACAAGTTAAAAGCA+AGG | - | chr7.3:82325078-82325097 | MS.gene000676:intron | 35.0% | |
| TAAAAGCAAGGTCTCTATCA+AGG | - | chr7.3:82325090-82325109 | MS.gene000676:intron | 35.0% | |
| TAAACATGAGGTTCATTTGC+CGG | - | chr7.3:82326889-82326908 | MS.gene000676:intron | 35.0% | |
| TAAAGATGCCTAACTTGAGA+GGG | + | chr7.3:82326657-82326676 | None:intergenic | 35.0% | |
| TCCAAGTAAAATCAAAGTCG+AGG | + | chr7.3:82325739-82325758 | None:intergenic | 35.0% | |
| TCCACAAATCAGGATCAAAT+AGG | - | chr7.3:82326080-82326099 | MS.gene000676:intron | 35.0% | |
| TGTGTGTTAACAGTTGTATC+TGG | - | chr7.3:82326015-82326034 | MS.gene000676:intron | 35.0% | |
| TTAAAGATGCCTAACTTGAG+AGG | + | chr7.3:82326658-82326677 | None:intergenic | 35.0% | |
| TTAAGATTGTCTAGTAGGGA+TGG | - | chr7.3:82325182-82325201 | MS.gene000676:intron | 35.0% | |
| TTACCTTTCAATTCAATGGG+TGG | - | chr7.3:82325641-82325660 | MS.gene000676:intron | 35.0% | |
| ! | ACTTTTACATGAACAAGCCA+TGG | + | chr7.3:82327141-82327160 | None:intergenic | 35.0% |
| ! | CAAAGCATCTTGTAAGATGA+AGG | + | chr7.3:82327761-82327780 | None:intergenic | 35.0% |
| ! | CACACAAAGGTATATTGTAG+AGG | + | chr7.3:82326001-82326020 | None:intergenic | 35.0% |
| ! | CCTTTAGAGATTCGTAAAGT+TGG | - | chr7.3:82325971-82325990 | MS.gene000676:intron | 35.0% |
| ! | CTTTTCACTTTCCAATCACA+GGG | - | chr7.3:82327697-82327716 | MS.gene000676:intron | 35.0% |
| ! | GAAAGGAGAGTTCTCTTTTA+GGG | + | chr7.3:82328364-82328383 | None:intergenic | 35.0% |
| ! | GAATCTCTAAAGGCTGAAAT+AGG | + | chr7.3:82325964-82325983 | None:intergenic | 35.0% |
| ! | TCTCATTAGTTTGAATTGGC+TGG | + | chr7.3:82325356-82325375 | None:intergenic | 35.0% |
| ! | TCTTTTCACTTTCCAATCAC+AGG | - | chr7.3:82327696-82327715 | MS.gene000676:intron | 35.0% |
| ! | TGAAAGGAGAGTTCTCTTTT+AGG | + | chr7.3:82328365-82328384 | None:intergenic | 35.0% |
| !! | TCCTCGACTTTGATTTTACT+TGG | - | chr7.3:82325735-82325754 | MS.gene000676:intron | 35.0% |
| !!! | AAGGTGTTGATTTTTTGGTG+AGG | - | chr7.3:82325143-82325162 | MS.gene000676:intron | 35.0% |
| AAACATGAGGTTCATTTGCC+GGG | - | chr7.3:82326890-82326909 | MS.gene000676:intron | 40.0% | |
| ACAACCAAGAGAATGTTGGA+CGG | - | chr7.3:82327794-82327813 | MS.gene000676:intron | 40.0% | |
| ACATCTCCTCTCTCATAGTT+TGG | + | chr7.3:82325682-82325701 | None:intergenic | 40.0% | |
| AGACAATTATCTGGCGTGAA+AGG | + | chr7.3:82328381-82328400 | None:intergenic | 40.0% | |
| AGTTTGTGAATGAGTTTCGG+AGG | + | chr7.3:82325849-82325868 | None:intergenic | 40.0% | |
| ATATGACCAAACTGCATACC+CGG | + | chr7.3:82326911-82326930 | None:intergenic | 40.0% | |
| ATTGCGTGGTTAACTGGAAT+AGG | + | chr7.3:82326394-82326413 | None:intergenic | 40.0% | |
| ATTGTGAACTGTCTCTGACT+TGG | + | chr7.3:82326288-82326307 | None:intergenic | 40.0% | |
| CAACCACCCATTGAATTGAA+AGG | + | chr7.3:82325647-82325666 | None:intergenic | 40.0% | |
| CTCGTTCAGTTTGATAAGGT+AGG | - | chr7.3:82324943-82324962 | MS.gene000676:intron | 40.0% | |
| CTTTATCGTAGGTCGACAAT+CGG | - | chr7.3:82324847-82324866 | MS.gene000676:CDS | 40.0% | |
| GAAGACAACCAAGAGAATGT+TGG | - | chr7.3:82327790-82327809 | MS.gene000676:intron | 40.0% | |
| GAGAAGAAACGCTTCATTCA+AGG | - | chr7.3:82326708-82326727 | MS.gene000676:intron | 40.0% | |
| GAGACTACATGTTTCGTTTC+TGG | - | chr7.3:82324984-82325003 | MS.gene000676:intron | 40.0% | |
| GATAAGGTAGGTTTCGGAAT+TGG | - | chr7.3:82324955-82324974 | MS.gene000676:intron | 40.0% | |
| GGTTCTCGTTCAGTTTGATA+AGG | - | chr7.3:82324939-82324958 | MS.gene000676:intron | 40.0% | |
| TGAGAATATCACTTGGGAAC+TGG | - | chr7.3:82328043-82328062 | MS.gene000676:intron | 40.0% | |
| TTAAACTGAAATGCGACCCT+AGG | + | chr7.3:82325388-82325407 | None:intergenic | 40.0% | |
| TTGTGAACTGTCTCTGACTT+GGG | + | chr7.3:82326287-82326306 | None:intergenic | 40.0% | |
| TTTCTCTGGGCAAACATCTA+TGG | - | chr7.3:82328173-82328192 | MS.gene000676:intron | 40.0% | |
| ! | ACATGTTTCGTTTCTGGATC+TGG | - | chr7.3:82324990-82325009 | MS.gene000676:intron | 40.0% |
| ! | CCCTATTTGATCCTGATTTG+TGG | + | chr7.3:82326084-82326103 | None:intergenic | 40.0% |
| ! | GGATTAGTGAAACACAGTCA+CGG | - | chr7.3:82326334-82326353 | MS.gene000676:intron | 40.0% |
| ! | TCTCATGATGATGACAACCA+TGG | - | chr7.3:82327121-82327140 | MS.gene000676:intron | 40.0% |
| !! | TGTTGGACGGGTTAAAATAG+TGG | - | chr7.3:82327807-82327826 | MS.gene000676:intron | 40.0% |
| !!! | TTTTTTGGTGAGGTGAAGCA+TGG | - | chr7.3:82325153-82325172 | MS.gene000676:intron | 40.0% |
| AATCAGAGAGACGAAGGGTT+TGG | - | chr7.3:82325298-82325317 | MS.gene000676:intron | 45.0% | |
| AATGAGTTTCGGAGGATGGA+TGG | + | chr7.3:82325841-82325860 | None:intergenic | 45.0% | |
| AATGTGCCTCACTGAGACTT+TGG | - | chr7.3:82324870-82324889 | MS.gene000676:CDS | 45.0% | |
| ACAAGGAGCTTATCATCTGC+TGG | - | chr7.3:82327885-82327904 | MS.gene000676:intron | 45.0% | |
| AGAACCTGAATCGCAATCTC+AGG | + | chr7.3:82324925-82324944 | None:intergenic | 45.0% | |
| AGCAAAAGTGACACAGCCAT+TGG | + | chr7.3:82325619-82325638 | None:intergenic | 45.0% | |
| AGCACGCCAACAACATGAAA+CGG | + | chr7.3:82327512-82327531 | None:intergenic | 45.0% | |
| ATGGTCTAACCACCAATCCA+TGG | + | chr7.3:82327913-82327932 | None:intergenic | 45.0% | |
| CAACCAAGAGAATGTTGGAC+GGG | - | chr7.3:82327795-82327814 | MS.gene000676:intron | 45.0% | |
| CGACGTTCGAACTTTATCGT+AGG | - | chr7.3:82324836-82324855 | MS.gene000676:CDS | 45.0% | |
| CTTATCATCTGCTGGTACCA+TGG | - | chr7.3:82327893-82327912 | MS.gene000676:intron | 45.0% | |
| GTAGTCTATGACTGAAGCTC+TGG | - | chr7.3:82325057-82325076 | MS.gene000676:intron | 45.0% | |
| TAACCCGTCCAACATTCTCT+TGG | + | chr7.3:82327801-82327820 | None:intergenic | 45.0% | |
| TAGTCCTGAGATTGCGATTC+AGG | - | chr7.3:82324918-82324937 | MS.gene000676:CDS | 45.0% | |
| TATGCAGATGTCCCTGTGAT+TGG | + | chr7.3:82327711-82327730 | None:intergenic | 45.0% | |
| TCTGATCACGCTCATTGTTC+CGG | - | chr7.3:82325870-82325889 | MS.gene000676:intron | 45.0% | |
| TGGTGGTTAGACCATAGTGA+CGG | - | chr7.3:82327918-82327937 | MS.gene000676:intron | 45.0% | |
| TGTGAATGAGTTTCGGAGGA+TGG | + | chr7.3:82325845-82325864 | None:intergenic | 45.0% | |
| TTGGACGAGATGGTTCAGAA+TGG | - | chr7.3:82324889-82324908 | MS.gene000676:CDS | 45.0% | |
| ! | AGATGATAGCCTTGCACACA+AGG | - | chr7.3:82328335-82328354 | MS.gene000676:CDS | 45.0% |
| ! | CTCTTGAAAAGGTGTGGCAT+TGG | - | chr7.3:82325902-82325921 | MS.gene000676:intron | 45.0% |
| ! | TAGGTTTCGGAATTGGTGCT+AGG | - | chr7.3:82324962-82324981 | MS.gene000676:intron | 45.0% |
| !! | AGAAAGCTCTAGAACCCTTG+TGG | + | chr7.3:82326363-82326382 | None:intergenic | 45.0% |
| !! | CAGACGTAACTTGTTACGAG+TGG | - | chr7.3:82325479-82325498 | MS.gene000676:CDS | 45.0% |
| !! | CCATCTCTTTTTGAGGGAGT+GGG | - | chr7.3:82327047-82327066 | MS.gene000676:intron | 45.0% |
| !! | TCCATCTCTTTTTGAGGGAG+TGG | - | chr7.3:82327046-82327065 | MS.gene000676:intron | 45.0% |
| !! | TTAGACCATAGTGACGGATG+TGG | - | chr7.3:82327924-82327943 | MS.gene000676:intron | 45.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+TGG | + | chr7.3:82328106-82328125 | None:intergenic | 5.0% |
| ACACAGTCACGGTTTCCACA+AGG | - | chr7.3:82326345-82326364 | MS.gene000676:intron | 50.0% | |
| AGAGATACGCACACTGTGTG+TGG | - | chr7.3:82325437-82325456 | MS.gene000676:CDS | 50.0% | |
| ATGTGGCCTTCAGTTCTTGC+AGG | - | chr7.3:82327941-82327960 | MS.gene000676:intron | 50.0% | |
| CACAGTCACGGTTTCCACAA+GGG | - | chr7.3:82326346-82326365 | MS.gene000676:intron | 50.0% | |
| CACTGAGACTTTGGACGAGA+TGG | - | chr7.3:82324879-82324898 | MS.gene000676:CDS | 50.0% | |
| CATCTGCTGGTACCATGGAT+TGG | - | chr7.3:82327898-82327917 | MS.gene000676:intron | 50.0% | |
| CATTTGCCGGGTATGCAGTT+TGG | - | chr7.3:82326902-82326921 | MS.gene000676:intron | 50.0% | |
| CCCACTCCCTCAAAAAGAGA+TGG | + | chr7.3:82327050-82327069 | None:intergenic | 50.0% | |
| CTGGTTCCTGCAAGAACTGA+AGG | + | chr7.3:82327950-82327969 | None:intergenic | 50.0% | |
| GGCTCAATCAGAGAGACGAA+GGG | - | chr7.3:82325293-82325312 | MS.gene000676:intron | 50.0% | |
| TCTCGTCCAAAGTCTCAGTG+AGG | + | chr7.3:82324879-82324898 | None:intergenic | 50.0% | |
| TGGCTCAATCAGAGAGACGA+AGG | - | chr7.3:82325292-82325311 | MS.gene000676:intron | 50.0% | |
| TGTGTGTGGACACTTGTGTG+AGG | - | chr7.3:82325451-82325470 | MS.gene000676:CDS | 50.0% | |
| TTGGCGTGCTTAGTAGCTTG+TGG | - | chr7.3:82327522-82327541 | MS.gene000676:intron | 50.0% | |
| ! | TGGCGTGCTTAGTAGCTTGT+GGG | - | chr7.3:82327523-82327542 | MS.gene000676:intron | 50.0% |
| AGAGAGACGAAGGGTTTGGC+TGG | - | chr7.3:82325302-82325321 | MS.gene000676:intron | 55.0% | |
| GAAGGCCACATCCGTCACTA+TGG | + | chr7.3:82327932-82327951 | None:intergenic | 55.0% | |
| GCGGGATACCCTCTCAAGTT+AGG | - | chr7.3:82326646-82326665 | MS.gene000676:intron | 55.0% | |
| ! | GGGCTGCCGTTTCATGTTGT+TGG | - | chr7.3:82327503-82327522 | MS.gene000676:intron | 55.0% |
| ! | TTAGGGCAGCCTTGTGTGCA+AGG | + | chr7.3:82328347-82328366 | None:intergenic | 55.0% |
| !! | CTGCTGGTACCATGGATTGG+TGG | - | chr7.3:82327901-82327920 | MS.gene000676:intron | 55.0% |
| !! | TGAGAGGGTATCCCGCCATA+AGG | + | chr7.3:82326642-82326661 | None:intergenic | 55.0% |
| !! | TGGTAAGTGAGAGCACCCTC+AGG | - | chr7.3:82325322-82325341 | MS.gene000676:intron | 55.0% |
| TGGCTGGCAGTGTGACCTGA+GGG | + | chr7.3:82325340-82325359 | None:intergenic | 60.0% | |
| TTGGCTGGCAGTGTGACCTG+AGG | + | chr7.3:82325341-82325360 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 82324832 | 82328413 | 82324832 | ID=MS.gene000676 |
| chr7.3 | mRNA | 82324832 | 82328413 | 82324832 | ID=MS.gene000676.t1;Parent=MS.gene000676 |
| chr7.3 | exon | 82328285 | 82328413 | 82328285 | ID=MS.gene000676.t1.exon1;Parent=MS.gene000676.t1 |
| chr7.3 | CDS | 82328285 | 82328413 | 82328285 | ID=cds.MS.gene000676.t1;Parent=MS.gene000676.t1 |
| chr7.3 | exon | 82328134 | 82328184 | 82328134 | ID=MS.gene000676.t1.exon2;Parent=MS.gene000676.t1 |
| chr7.3 | CDS | 82328134 | 82328184 | 82328134 | ID=cds.MS.gene000676.t1;Parent=MS.gene000676.t1 |
| chr7.3 | exon | 82325395 | 82325527 | 82325395 | ID=MS.gene000676.t1.exon3;Parent=MS.gene000676.t1 |
| chr7.3 | CDS | 82325395 | 82325527 | 82325395 | ID=cds.MS.gene000676.t1;Parent=MS.gene000676.t1 |
| chr7.3 | exon | 82324832 | 82324947 | 82324832 | ID=MS.gene000676.t1.exon4;Parent=MS.gene000676.t1 |
| chr7.3 | CDS | 82324832 | 82324947 | 82324832 | ID=cds.MS.gene000676.t1;Parent=MS.gene000676.t1 |
| Gene Sequence |
| Protein sequence |
