Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78402.t1 | XP_003597404.1 | 99 | 389 | 3 | 1 | 1 | 389 | 1 | 388 | 5.10E-198 | 700.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78402.t1 | Q9USU9 | 23.9 | 414 | 244 | 12 | 1 | 389 | 1 | 368 | 2.6e-09 | 64.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78402.t1 | G7IRY2 | 99.0 | 389 | 3 | 1 | 1 | 389 | 1 | 388 | 3.7e-198 | 700.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052074 | MS.gene78402 | 0.986461 | 7.29E-167 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76728 | MS.gene78402 | PPI |
| MS.gene31113 | MS.gene78402 | PPI |
| MS.gene78402 | MS.gene000324 | PPI |
| MS.gene052074 | MS.gene78402 | PPI |
| MS.gene97439 | MS.gene78402 | PPI |
| MS.gene42075 | MS.gene78402 | PPI |
| MS.gene78402 | MS.gene45536 | PPI |
| MS.gene87743 | MS.gene78402 | PPI |
| MS.gene87064 | MS.gene78402 | PPI |
| MS.gene77045 | MS.gene78402 | PPI |
| MS.gene000676 | MS.gene78402 | PPI |
| MS.gene78402 | MS.gene82237 | PPI |
| MS.gene78402 | MS.gene54331 | PPI |
| MS.gene48819 | MS.gene78402 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78402.t1 | MTR_2g097740 | 98.972 | 389 | 3 | 1 | 1 | 389 | 1 | 388 | 0.0 | 783 |
| MS.gene78402.t1 | MTR_2g097740 | 98.667 | 300 | 3 | 1 | 1 | 300 | 1 | 299 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78402.t1 | AT1G07480 | 59.542 | 393 | 134 | 15 | 2 | 389 | 3 | 375 | 1.84e-117 | 346 |
| MS.gene78402.t1 | AT1G07480 | 59.542 | 393 | 134 | 15 | 2 | 389 | 3 | 375 | 1.84e-117 | 346 |
| MS.gene78402.t1 | AT1G07470 | 59.694 | 392 | 135 | 14 | 2 | 389 | 3 | 375 | 2.61e-117 | 346 |
| MS.gene78402.t1 | AT1G07470 | 59.694 | 392 | 135 | 14 | 2 | 389 | 3 | 375 | 2.61e-117 | 346 |
| MS.gene78402.t1 | AT1G07480 | 58.915 | 387 | 134 | 15 | 2 | 383 | 3 | 369 | 2.82e-112 | 333 |
| MS.gene78402.t1 | AT5G59230 | 53.750 | 80 | 35 | 2 | 311 | 389 | 108 | 186 | 3.80e-14 | 70.9 |
Find 113 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTATCTTGATCATCTTCT+TGG | 0.222109 | 2.3:-5392423 | None:intergenic |
| CCAGTAGGAATGTTATAATT+TGG | 0.250172 | 2.3:-5389491 | None:intergenic |
| AGGGAAAATGCCCGCAGATT+TGG | 0.287913 | 2.3:+5391386 | MS.gene78402:CDS |
| ATTTGGAGAGACTGGCTTCT+AGG | 0.292801 | 2.3:+5391403 | MS.gene78402:CDS |
| TTGTTGCAGATATACAATTA+TGG | 0.335365 | 2.3:+5392144 | MS.gene78402:intron |
| GGACCAAGTGACTACTCTTC+TGG | 0.340039 | 2.3:+5389512 | MS.gene78402:CDS |
| AGGTTGTTACCTTGTCAAAC+TGG | 0.355503 | 2.3:-5392462 | None:intergenic |
| AGATACAAATCATCTAGTTT+TGG | 0.359284 | 2.3:+5392438 | MS.gene78402:CDS |
| TCATCATCATCTTCATTTAG+TGG | 0.365282 | 2.3:-5392382 | None:intergenic |
| TGATCTTAATGTTCCGTATG+AGG | 0.368591 | 2.3:+5389272 | MS.gene78402:CDS |
| CGCAGCCACCTCCTTCTCCT+TGG | 0.376513 | 2.3:+5389942 | MS.gene78402:intron |
| TCTAGGATTCCTCAACTTGA+TGG | 0.388199 | 2.3:+5391420 | MS.gene78402:CDS |
| TGATGGTCCGATTCCTTATG+AGG | 0.391439 | 2.3:+5391437 | MS.gene78402:CDS |
| ACTCCAGTGTTCCTCTCAAT+TGG | 0.392170 | 2.3:-5389210 | None:intergenic |
| AACTTGTTTACCTGTGTCAT+AGG | 0.398979 | 2.3:-5390129 | None:intergenic |
| AAAATGAACTTTACCATGAA+TGG | 0.405772 | 2.3:-5389581 | None:intergenic |
| TCACAACACACTAATTCAAA+AGG | 0.410420 | 2.3:+5391366 | MS.gene78402:CDS |
| AGATCATGAACCGGAGTAAT+CGG | 0.414812 | 2.3:-5389255 | None:intergenic |
| TGTGCACTTCCACCTGCTCT+TGG | 0.426626 | 2.3:-5392617 | None:intergenic |
| CCAAATTATAACATTCCTAC+TGG | 0.428512 | 2.3:+5389491 | MS.gene78402:CDS |
| CAGGTGGAAGTGCACATTAA+AGG | 0.432895 | 2.3:+5392624 | MS.gene78402:CDS |
| AGAGGAACACTGGAGTTAAC+AGG | 0.440705 | 2.3:+5389217 | MS.gene78402:CDS |
| CGCGATGAGTTTGTCAATAC+CGG | 0.445836 | 2.3:+5388914 | MS.gene78402:CDS |
| ATTAGTGTGTTGTGAATTGA+AGG | 0.450304 | 2.3:-5391358 | None:intergenic |
| GCCCGCAGATTTGGAGAGAC+TGG | 0.455534 | 2.3:+5391395 | MS.gene78402:CDS |
| GTCAATACCGGTGCTGGTCC+TGG | 0.455673 | 2.3:+5388926 | MS.gene78402:CDS |
| TGGAAGACAAGCTCCATTCA+TGG | 0.461106 | 2.3:+5389568 | MS.gene78402:CDS |
| CAAACACCTTTACCTGGACC+TGG | 0.464074 | 2.3:+5389461 | MS.gene78402:CDS |
| TGATGATGATTTGGATGACT+TGG | 0.479256 | 2.3:+5392399 | MS.gene78402:CDS |
| CAGGACTTCTTCACAATGAC+TGG | 0.485430 | 2.3:+5390428 | MS.gene78402:intron |
| GAAAGCACATCATCCTCATA+AGG | 0.485824 | 2.3:-5391450 | None:intergenic |
| TGGAGTTAACAGGCCAATGC+CGG | 0.486906 | 2.3:+5389227 | MS.gene78402:CDS |
| ATTCAAGCTGGTGCAGTGCT+AGG | 0.493773 | 2.3:+5389186 | MS.gene78402:CDS |
| GGCTGCTTCTACCACAAGCC+AGG | 0.495166 | 2.3:+5388853 | MS.gene78402:CDS |
| GAGTTTGTCAATACCGGTGC+TGG | 0.495587 | 2.3:+5388920 | MS.gene78402:CDS |
| GTCTCCCCAGGTCCAGGTAA+AGG | 0.497263 | 2.3:-5389467 | None:intergenic |
| ATATATCCTCCAGCATCATA+TGG | 0.501723 | 2.3:-5390482 | None:intergenic |
| TACTCTTCTGGAAATGATGC+TGG | 0.503251 | 2.3:+5389524 | MS.gene78402:CDS |
| TTCAAGCTACCAGGAGGAGC+TGG | 0.507227 | 2.3:-5392204 | None:intergenic |
| CCGATTCAAACACCTTTACC+TGG | 0.513406 | 2.3:+5389455 | MS.gene78402:CDS |
| GGACGGGATGAGGCAGATAG+AGG | 0.514454 | 2.3:+5390093 | MS.gene78402:CDS |
| GCCAGTCTCTCCAAATCTGC+GGG | 0.514751 | 2.3:-5391396 | None:intergenic |
| CCAGGTAAAGGTGTTTGAAT+CGG | 0.515120 | 2.3:-5389455 | None:intergenic |
| GGAGCTGGTGATGCTATGTC+TGG | 0.517406 | 2.3:+5390518 | MS.gene78402:CDS |
| GTAATCGGACCACCCGGCAT+TGG | 0.517485 | 2.3:-5389240 | None:intergenic |
| ACATCATCCTCATAAGGAAT+CGG | 0.517868 | 2.3:-5391444 | None:intergenic |
| CGATGACATCGATATAAACC+TGG | 0.522288 | 2.3:-5388871 | None:intergenic |
| TTTGGAGTCTCCCCAGGTCC+AGG | 0.523372 | 2.3:-5389473 | None:intergenic |
| GAGTAGTCACTTGGTCCAGT+AGG | 0.523425 | 2.3:-5389506 | None:intergenic |
| TGCAGCTTATGTGGAAGGAC+GGG | 0.529802 | 2.3:+5390077 | MS.gene78402:intron |
| ACAAGAGCAGGAGTGCTAGC+TGG | 0.532966 | 2.3:-5392319 | None:intergenic |
| CACAACACACTAATTCAAAA+GGG | 0.534356 | 2.3:+5391367 | MS.gene78402:CDS |
| TCAAAATGAGGCGGTAAATG+AGG | 0.539515 | 2.3:+5392345 | MS.gene78402:CDS |
| GCAAATACACCAGCTCCTCC+TGG | 0.541264 | 2.3:+5392195 | MS.gene78402:CDS |
| TGAGGCGGTAAATGAGGATG+AGG | 0.542954 | 2.3:+5392351 | MS.gene78402:CDS |
| AATACACTTCTGCAGGCGAC+AGG | 0.543940 | 2.3:+5392775 | MS.gene78402:intron |
| TACTCCTCAGTTCCCTCATA+CGG | 0.544761 | 2.3:-5389285 | None:intergenic |
| TTCTAATCAGCCTATGACAC+AGG | 0.545412 | 2.3:+5390119 | MS.gene78402:CDS |
| TTATAATTTGGAGTCTCCCC+AGG | 0.547927 | 2.3:-5389479 | None:intergenic |
| GGTTGTTACCTTGTCAAACT+GGG | 0.548333 | 2.3:-5392461 | None:intergenic |
| CATCATGCATATAAACAAGA+AGG | 0.552004 | 2.3:+5392651 | MS.gene78402:CDS |
| AGGTGACACGCACCAAGAGC+AGG | 0.553192 | 2.3:+5392605 | MS.gene78402:intron |
| GGAGTTAACAGGCCAATGCC+GGG | 0.554860 | 2.3:+5389228 | MS.gene78402:CDS |
| AATTTACGGCTTGAAGCTCT+CGG | 0.558169 | 2.3:-5388961 | None:intergenic |
| CCTCCACTTGATGTCAATGT+TGG | 0.562280 | 2.3:+5389983 | MS.gene78402:CDS |
| TTGCCTCCACCATATGATGC+TGG | 0.562588 | 2.3:+5390473 | MS.gene78402:CDS |
| ATACCTCAGCAAGATGGAGC+TGG | 0.563069 | 2.3:+5390503 | MS.gene78402:CDS |
| GGAAATGCTGATGTCAAAGC+TGG | 0.564505 | 2.3:+5389548 | MS.gene78402:CDS |
| GGATATATACCTCAGCAAGA+TGG | 0.565273 | 2.3:+5390497 | MS.gene78402:CDS |
| ATTGCGCACTGCAGCTTATG+TGG | 0.566301 | 2.3:+5390068 | MS.gene78402:intron |
| CTGCAGCTTATGTGGAAGGA+CGG | 0.566913 | 2.3:+5390076 | MS.gene78402:intron |
| CGATGTCATCGAAGATGTCA+TGG | 0.569568 | 2.3:+5388883 | MS.gene78402:CDS |
| TTATGTGGAAGGACGGGATG+AGG | 0.571680 | 2.3:+5390083 | MS.gene78402:CDS |
| TTACCAACATTGACATCAAG+TGG | 0.572587 | 2.3:-5389986 | None:intergenic |
| GTTTGAATCGGAGTTTGCAA+CGG | 0.574992 | 2.3:-5389443 | None:intergenic |
| CGCACTGCAGCTTATGTGGA+AGG | 0.577153 | 2.3:+5390072 | MS.gene78402:intron |
| GGAACATTAAGATCATGAAC+CGG | 0.578096 | 2.3:-5389264 | None:intergenic |
| GACTTCTTCACAATGACTGG+TGG | 0.579685 | 2.3:+5390431 | MS.gene78402:CDS |
| TTCATCACCAGGACCAGCAC+CGG | 0.582603 | 2.3:-5388933 | None:intergenic |
| AAACACCTTTACCTGGACCT+GGG | 0.585553 | 2.3:+5389462 | MS.gene78402:CDS |
| GATCTTAATGTTCCGTATGA+GGG | 0.585955 | 2.3:+5389273 | MS.gene78402:CDS |
| TTCATATTCATCCAAGGAGA+AGG | 0.587542 | 2.3:-5389953 | None:intergenic |
| GGTCCAATTGAGAGGAACAC+TGG | 0.589679 | 2.3:+5389207 | MS.gene78402:CDS |
| TTGCAGATATACAATTATGG+TGG | 0.593778 | 2.3:+5392147 | MS.gene78402:intron |
| TGCTCTTGTAGCTCAAAATG+AGG | 0.597552 | 2.3:+5392333 | MS.gene78402:CDS |
| GAATCGAAGTGTATTCAAGC+TGG | 0.597656 | 2.3:+5389174 | MS.gene78402:CDS |
| TTTCCAGAAGAGTAGTCACT+TGG | 0.600064 | 2.3:-5389515 | None:intergenic |
| TCTCGGAGGACTTCATCACC+AGG | 0.601821 | 2.3:-5388944 | None:intergenic |
| TTCATCCAAGGAGAAGGAGG+TGG | 0.602567 | 2.3:-5389947 | None:intergenic |
| CCTCCAGCATCATATGGTGG+AGG | 0.603099 | 2.3:-5390476 | None:intergenic |
| CTCTGATTCATATTCATCCA+AGG | 0.608051 | 2.3:-5389959 | None:intergenic |
| AGCCAGTCTCTCCAAATCTG+CGG | 0.610071 | 2.3:-5391397 | None:intergenic |
| ACCGGAGTAATCGGACCACC+CGG | 0.614149 | 2.3:-5389246 | None:intergenic |
| CAGTGCTAGGTCCAATTGAG+AGG | 0.615366 | 2.3:+5389199 | MS.gene78402:CDS |
| ATCGATATAAACCTGGCTTG+TGG | 0.617594 | 2.3:-5388864 | None:intergenic |
| TGGAAGTGCACATTAAAGGA+TGG | 0.618008 | 2.3:+5392628 | MS.gene78402:CDS |
| CTTGGATGAATATGAATCAG+AGG | 0.618483 | 2.3:+5389960 | MS.gene78402:CDS |
| GCCGGGTGGTCCGATTACTC+CGG | 0.623007 | 2.3:+5389245 | MS.gene78402:CDS |
| GGAATCGGACCATCAAGTTG+AGG | 0.623522 | 2.3:-5391429 | None:intergenic |
| AACACCTTTACCTGGACCTG+GGG | 0.636177 | 2.3:+5389463 | MS.gene78402:CDS |
| ATATTCATCCAAGGAGAAGG+AGG | 0.641539 | 2.3:-5389950 | None:intergenic |
| TCTTCTGGAAATGATGCTGG+TGG | 0.644417 | 2.3:+5389527 | MS.gene78402:CDS |
| CCTCCACCATATGATGCTGG+AGG | 0.647419 | 2.3:+5390476 | MS.gene78402:CDS |
| TCACAATGACTGGTGGAAAG+CGG | 0.647720 | 2.3:+5390438 | MS.gene78402:CDS |
| TGACACGCACCAAGAGCAGG+TGG | 0.657534 | 2.3:+5392608 | MS.gene78402:CDS |
| GAAGGATATTCTCTTCAACA+AGG | 0.659878 | 2.3:+5392669 | MS.gene78402:CDS |
| TCACCAGCTCCATCTTGCTG+AGG | 0.663455 | 2.3:-5390506 | None:intergenic |
| TATCCTCCAGCATCATATGG+TGG | 0.667282 | 2.3:-5390479 | None:intergenic |
| TTACGGCTTGAAGCTCTCGG+AGG | 0.690563 | 2.3:-5388958 | None:intergenic |
| TCTTGTAGCTCAAAATGAGG+CGG | 0.698401 | 2.3:+5392336 | MS.gene78402:CDS |
| GTTAACAGGCCAATGCCGGG+TGG | 0.703646 | 2.3:+5389231 | MS.gene78402:CDS |
| TGTTCCGTATGAGGGAACTG+AGG | 0.717469 | 2.3:+5389281 | MS.gene78402:CDS |
| CCAACATTGACATCAAGTGG+AGG | 0.729595 | 2.3:-5389983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATTTATGTAAGTT+AGG | + | chr2.3:5390601-5390620 | MS.gene78402:intron | 10.0% |
| !!! | ATTTATTGTTATTTGTTAAT+GGG | + | chr2.3:5389380-5389399 | MS.gene78402:intron | 10.0% |
| !!! | TATTTATTGTTATTTGTTAA+TGG | + | chr2.3:5389379-5389398 | MS.gene78402:intron | 10.0% |
| !!! | TTGAAGAAATTTTTTATTTA+GGG | + | chr2.3:5389079-5389098 | MS.gene78402:intron | 10.0% |
| !!! | TTTGAAGAAATTTTTTATTT+AGG | + | chr2.3:5389078-5389097 | MS.gene78402:intron | 10.0% |
| !! | ATCTATTTACAAATAACTAA+AGG | - | chr2.3:5391605-5391624 | None:intergenic | 15.0% |
| !!! | AAATTTTTTATTTAGGGTTT+TGG | + | chr2.3:5389085-5389104 | MS.gene78402:intron | 15.0% |
| !!! | AATTATATTTTGAAGATTTG+TGG | + | chr2.3:5392240-5392259 | MS.gene78402:intron | 15.0% |
| !!! | TCAATTTAATGGATTAAAAT+AGG | + | chr2.3:5391932-5391951 | MS.gene78402:intron | 15.0% |
| !! | AAAACTACAAGATACAAATT+AGG | - | chr2.3:5390853-5390872 | None:intergenic | 20.0% |
| !! | ATAAAAACATAACTCACATT+TGG | - | chr2.3:5391480-5391499 | None:intergenic | 20.0% |
| !! | ATTGAAAATTAAGGAGAAAA+AGG | - | chr2.3:5389006-5389025 | None:intergenic | 20.0% |
| !! | ATTTACAAATAACTAAAGGT+CGG | - | chr2.3:5391601-5391620 | None:intergenic | 20.0% |
| !! | CAGGTTAATGTTTAATAAAA+CGG | + | chr2.3:5390023-5390042 | MS.gene78402:intron | 20.0% |
| !! | GAAGTCATTAATAGTTTATT+TGG | - | chr2.3:5390938-5390957 | None:intergenic | 20.0% |
| !! | TAACTTCGTAATCAATTTAA+TGG | + | chr2.3:5391921-5391940 | MS.gene78402:intron | 20.0% |
| !! | TGAAGAAATTGTGAAATTTA+CGG | - | chr2.3:5388978-5388997 | None:intergenic | 20.0% |
| !! | TTATTTGTAAATAGATACGT+CGG | + | chr2.3:5391609-5391628 | MS.gene78402:intron | 20.0% |
| !! | TTCAGTTTATTTAATTGTCA+CGG | + | chr2.3:5392742-5392761 | MS.gene78402:intron | 20.0% |
| !! | TTGAAAATTAAGGAGAAAAA+GGG | - | chr2.3:5389005-5389024 | None:intergenic | 20.0% |
| !!! | AATGAAAGTGTTATTTATAG+AGG | + | chr2.3:5389748-5389767 | MS.gene78402:intron | 20.0% |
| !!! | AGTGTTGATTTATAAAACAA+GGG | + | chr2.3:5390717-5390736 | MS.gene78402:intron | 20.0% |
| !!! | ATGAAAGTGTTATTTATAGA+GGG | + | chr2.3:5389749-5389768 | MS.gene78402:intron | 20.0% |
| !!! | GTAGTTTTAAAAAATTGTTG+TGG | + | chr2.3:5390865-5390884 | MS.gene78402:intron | 20.0% |
| !!! | TCATATATTTTCTTGACATT+TGG | + | chr2.3:5392267-5392286 | MS.gene78402:intron | 20.0% |
| !!! | TTGATGATTTGTTTAGATTT+GGG | + | chr2.3:5389152-5389171 | MS.gene78402:intron | 20.0% |
| !!! | TTTGATGATTTGTTTAGATT+TGG | + | chr2.3:5389151-5389170 | MS.gene78402:intron | 20.0% |
| ! | AAAATGAACTTTACCATGAA+TGG | - | chr2.3:5389584-5389603 | None:intergenic | 25.0% |
| ! | AAAGTAACAACTTAGAAAAC+TGG | - | chr2.3:5391963-5391982 | None:intergenic | 25.0% |
| ! | AAATATTACTGTATCCATCT+TGG | - | chr2.3:5391992-5392011 | None:intergenic | 25.0% |
| ! | AATAAACATCTGAAGAGATA+TGG | - | chr2.3:5391753-5391772 | None:intergenic | 25.0% |
| ! | AATACAATGGAAAACATGTT+TGG | - | chr2.3:5389792-5389811 | None:intergenic | 25.0% |
| ! | AATTGACATTACCACTATTA+CGG | - | chr2.3:5390653-5390672 | None:intergenic | 25.0% |
| ! | ACTAATAATCCCAGTTTAAA+AGG | + | chr2.3:5391647-5391666 | MS.gene78402:intron | 25.0% |
| ! | AGCAATATGATATATCTAAC+GGG | + | chr2.3:5392529-5392548 | MS.gene78402:intron | 25.0% |
| ! | CAATTGAGAAACTAATACAA+TGG | - | chr2.3:5389805-5389824 | None:intergenic | 25.0% |
| ! | CAGCAATATGATATATCTAA+CGG | + | chr2.3:5392528-5392547 | MS.gene78402:intron | 25.0% |
| ! | CTAATAATCCCAGTTTAAAA+GGG | + | chr2.3:5391648-5391667 | MS.gene78402:intron | 25.0% |
| ! | CTTCAGATGTTTATTATTCT+AGG | + | chr2.3:5391758-5391777 | MS.gene78402:intron | 25.0% |
| ! | TAAAACAATATTGCACGATT+TGG | + | chr2.3:5390304-5390323 | MS.gene78402:intron | 25.0% |
| ! | TAAACAGTGAAAAAAAGTCA+CGG | + | chr2.3:5391787-5391806 | MS.gene78402:intron | 25.0% |
| ! | TAAATACCCATTAAATGTGT+TGG | - | chr2.3:5390257-5390276 | None:intergenic | 25.0% |
| ! | TAACTTCTTTACATAAGTCT+TGG | + | chr2.3:5392085-5392104 | MS.gene78402:intron | 25.0% |
| ! | TAGATGTTTGAAAAAATTCC+AGG | + | chr2.3:5390409-5390428 | MS.gene78402:intron | 25.0% |
| ! | TGTAATTAACTGAAAGTGAA+AGG | - | chr2.3:5392488-5392507 | None:intergenic | 25.0% |
| ! | TGTATGAATCACAAAAATGA+TGG | + | chr2.3:5389674-5389693 | MS.gene78402:intron | 25.0% |
| ! | TTGTTGCAGATATACAATTA+TGG | + | chr2.3:5392144-5392163 | MS.gene78402:intron | 25.0% |
| ! | TTTACAAATAACTAAAGGTC+GGG | - | chr2.3:5391600-5391619 | None:intergenic | 25.0% |
| !! | ACTGTTGAACATAATCTTTT+AGG | + | chr2.3:5391317-5391336 | MS.gene78402:intron | 25.0% |
| !! | GGGGTTAGATAATATATTTT+GGG | + | chr2.3:5392555-5392574 | MS.gene78402:intron | 25.0% |
| !! | TATTTATAGAGGGATTTTGT+GGG | + | chr2.3:5389759-5389778 | MS.gene78402:intron | 25.0% |
| !! | TGTTCAATTGATTTAAGCTT+TGG | + | chr2.3:5389837-5389856 | MS.gene78402:intron | 25.0% |
| !! | TTATTTATAGAGGGATTTTG+TGG | + | chr2.3:5389758-5389777 | MS.gene78402:intron | 25.0% |
| !!! | AACATAATCTTTTAGGTATG+TGG | + | chr2.3:5391324-5391343 | MS.gene78402:intron | 25.0% |
| !!! | AGATACAAATCATCTAGTTT+TGG | + | chr2.3:5392438-5392457 | MS.gene78402:CDS | 25.0% |
| !!! | AGTTCATTTGGTTTTAGAAA+AGG | - | chr2.3:5391030-5391049 | None:intergenic | 25.0% |
| !!! | GAGTGTTGATTTATAAAACA+AGG | + | chr2.3:5390716-5390735 | MS.gene78402:intron | 25.0% |
| !!! | GATCTGATTAGTTTTGTTTA+GGG | + | chr2.3:5389107-5389126 | MS.gene78402:intron | 25.0% |
| !!! | GTGTTGATTTATAAAACAAG+GGG | + | chr2.3:5390718-5390737 | MS.gene78402:intron | 25.0% |
| !!! | TTATTTGTTAATGGGTGTTT+TGG | + | chr2.3:5389388-5389407 | MS.gene78402:intron | 25.0% |
| AATTAACTGAAAGTGAAAGG+AGG | - | chr2.3:5392485-5392504 | None:intergenic | 30.0% | |
| AGATACAAATTAGGTAGAGA+TGG | - | chr2.3:5390844-5390863 | None:intergenic | 30.0% | |
| ATGAATCACAAAAATGATGG+TGG | + | chr2.3:5389677-5389696 | MS.gene78402:intron | 30.0% | |
| ATTAGTGTGTTGTGAATTGA+AGG | - | chr2.3:5391361-5391380 | None:intergenic | 30.0% | |
| ATTTGATGAGACCTTATTGT+TGG | + | chr2.3:5390191-5390210 | MS.gene78402:intron | 30.0% | |
| CAACAGAAAACAAACATTGA+TGG | - | chr2.3:5390688-5390707 | None:intergenic | 30.0% | |
| CACAACACACTAATTCAAAA+GGG | + | chr2.3:5391367-5391386 | MS.gene78402:CDS | 30.0% | |
| CATCATGCATATAAACAAGA+AGG | + | chr2.3:5392651-5392670 | MS.gene78402:CDS | 30.0% | |
| CATGCTATATGTTTATCATG+AGG | + | chr2.3:5389638-5389657 | MS.gene78402:intron | 30.0% | |
| CCAAATTATAACATTCCTAC+TGG | + | chr2.3:5389491-5389510 | MS.gene78402:CDS | 30.0% | |
| CCAGTAGGAATGTTATAATT+TGG | - | chr2.3:5389494-5389513 | None:intergenic | 30.0% | |
| CTATATGTTTATCATGAGGT+TGG | + | chr2.3:5389642-5389661 | MS.gene78402:intron | 30.0% | |
| CTCATGATAAACATATAGCA+TGG | - | chr2.3:5389640-5389659 | None:intergenic | 30.0% | |
| CTTGTTCCAACACATTTAAT+GGG | + | chr2.3:5390248-5390267 | MS.gene78402:intron | 30.0% | |
| GAATAAAACAAAACCCTGTA+AGG | - | chr2.3:5392120-5392139 | None:intergenic | 30.0% | |
| TAAATGTGTTGGAACAAGAA+AGG | - | chr2.3:5390246-5390265 | None:intergenic | 30.0% | |
| TCACAACACACTAATTCAAA+AGG | + | chr2.3:5391366-5391385 | MS.gene78402:CDS | 30.0% | |
| TCATCATCATCTTCATTTAG+TGG | - | chr2.3:5392385-5392404 | None:intergenic | 30.0% | |
| TCCCAAAATAATTCTGAGTA+GGG | - | chr2.3:5391562-5391581 | None:intergenic | 30.0% | |
| TCTTAAAAGCAGTGAACAAT+AGG | - | chr2.3:5390172-5390191 | None:intergenic | 30.0% | |
| TCTTGTTCCAACACATTTAA+TGG | + | chr2.3:5390247-5390266 | MS.gene78402:intron | 30.0% | |
| TTCCCAAAATAATTCTGAGT+AGG | - | chr2.3:5391563-5391582 | None:intergenic | 30.0% | |
| TTGCAGATATACAATTATGG+TGG | + | chr2.3:5392147-5392166 | MS.gene78402:intron | 30.0% | |
| TTGTATCTTGATCATCTTCT+TGG | - | chr2.3:5392426-5392445 | None:intergenic | 30.0% | |
| TTTGATGAGACCTTATTGTT+GGG | + | chr2.3:5390192-5390211 | MS.gene78402:intron | 30.0% | |
| ! | AAACGGATTTACAATAACGA+TGG | + | chr2.3:5390040-5390059 | MS.gene78402:intron | 30.0% |
| ! | ATATGATATATCTAACGGGT+AGG | + | chr2.3:5392533-5392552 | MS.gene78402:intron | 30.0% |
| ! | ATTTATAGAGGGATTTTGTG+GGG | + | chr2.3:5389760-5389779 | MS.gene78402:intron | 30.0% |
| ! | GGGGGTTAGATAATATATTT+TGG | + | chr2.3:5392554-5392573 | MS.gene78402:intron | 30.0% |
| ! | TATGATATATCTAACGGGTA+GGG | + | chr2.3:5392534-5392553 | MS.gene78402:intron | 30.0% |
| ! | TCCCTACTCAGAATTATTTT+GGG | + | chr2.3:5391558-5391577 | MS.gene78402:intron | 30.0% |
| ! | TCTAAAACCAAATGAACTCT+TGG | + | chr2.3:5391032-5391051 | MS.gene78402:intron | 30.0% |
| ! | TGAAGATGATGATGATGATT+TGG | + | chr2.3:5392390-5392409 | MS.gene78402:CDS | 30.0% |
| ! | TTCCCTACTCAGAATTATTT+TGG | + | chr2.3:5391557-5391576 | MS.gene78402:intron | 30.0% |
| !! | AAACTAACAATGTTGGTTCT+AGG | + | chr2.3:5391127-5391146 | MS.gene78402:intron | 30.0% |
| !! | AACTAACAATGTTGGTTCTA+GGG | + | chr2.3:5391128-5391147 | MS.gene78402:intron | 30.0% |
| !! | AATTCATTGACTTGCTCAAT+TGG | + | chr2.3:5391269-5391288 | MS.gene78402:intron | 30.0% |
| !! | ATAATCTTTTAGGTATGTGG+AGG | + | chr2.3:5391327-5391346 | MS.gene78402:intron | 30.0% |
| !! | GTGTTTTGGATTGTTGATAT+GGG | + | chr2.3:5389402-5389421 | MS.gene78402:intron | 30.0% |
| !! | TAATCTTTTAGGTATGTGGA+GGG | + | chr2.3:5391328-5391347 | MS.gene78402:intron | 30.0% |
| !! | TGTTTGTTTTCTGTTGTAAG+TGG | + | chr2.3:5390692-5390711 | MS.gene78402:intron | 30.0% |
| !!! | AGTTTTTGAGATATCAAAGC+AGG | - | chr2.3:5392028-5392047 | None:intergenic | 30.0% |
| !!! | GGATCTGATTAGTTTTGTTT+AGG | + | chr2.3:5389106-5389125 | MS.gene78402:intron | 30.0% |
| !!! | GTTACTTTTTGAATCCAAGA+TGG | + | chr2.3:5391975-5391994 | MS.gene78402:intron | 30.0% |
| !!! | TATTTTGGGACTAATAGAGT+TGG | + | chr2.3:5392569-5392588 | MS.gene78402:intron | 30.0% |
| AAAAAGATGGGGAAAAAGTG+AGG | + | chr2.3:5389707-5389726 | MS.gene78402:intron | 35.0% | |
| AAAGGTTCTCCCTTTCATTA+TGG | - | chr2.3:5391012-5391031 | None:intergenic | 35.0% | |
| ACACTCACACCATAATGAAA+GGG | + | chr2.3:5391000-5391019 | MS.gene78402:intron | 35.0% | |
| ACAGGTAAACAAGTTGTTGA+GGG | + | chr2.3:5390137-5390156 | MS.gene78402:intron | 35.0% | |
| ACATCATCCTCATAAGGAAT+CGG | - | chr2.3:5391447-5391466 | None:intergenic | 35.0% | |
| ATATATCCTCCAGCATCATA+TGG | - | chr2.3:5390485-5390504 | None:intergenic | 35.0% | |
| ATGATACAATACACTTCTGC+AGG | + | chr2.3:5392768-5392787 | MS.gene78402:intron | 35.0% | |
| ATGATGAACCAAGAAAGAAG+AGG | - | chr2.3:5391861-5391880 | None:intergenic | 35.0% | |
| ATGCCCATTCAATCAATTCA+GGG | - | chr2.3:5392066-5392085 | None:intergenic | 35.0% | |
| CATAAAACAGCCCAACAATA+AGG | - | chr2.3:5390205-5390224 | None:intergenic | 35.0% | |
| CTCTGATTCATATTCATCCA+AGG | - | chr2.3:5389962-5389981 | None:intergenic | 35.0% | |
| CTTGGATGAATATGAATCAG+AGG | + | chr2.3:5389960-5389979 | MS.gene78402:CDS | 35.0% | |
| GAAGGATATTCTCTTCAACA+AGG | + | chr2.3:5392669-5392688 | MS.gene78402:CDS | 35.0% | |
| GATCCCTGAATTGATTGAAT+GGG | + | chr2.3:5392060-5392079 | MS.gene78402:intron | 35.0% | |
| GATCTTAATGTTCCGTATGA+GGG | + | chr2.3:5389273-5389292 | MS.gene78402:CDS | 35.0% | |
| GGAACATTAAGATCATGAAC+CGG | - | chr2.3:5389267-5389286 | None:intergenic | 35.0% | |
| GGGAAAGAAACTAACAATGT+TGG | + | chr2.3:5391120-5391139 | MS.gene78402:intron | 35.0% | |
| GGGTTTCATATCACTTTGTT+GGG | + | chr2.3:5390738-5390757 | MS.gene78402:intron | 35.0% | |
| TAATTGCAAAAACTCACAGG+AGG | - | chr2.3:5389339-5389358 | None:intergenic | 35.0% | |
| TATGCCCATTCAATCAATTC+AGG | - | chr2.3:5392067-5392086 | None:intergenic | 35.0% | |
| TCAATCAATTCAGGGATCAA+AGG | - | chr2.3:5392058-5392077 | None:intergenic | 35.0% | |
| TCAGCCACTTCAAAACTATA+AGG | + | chr2.3:5390959-5390978 | MS.gene78402:intron | 35.0% | |
| TGAACAGACACTCATTCATA+TGG | - | chr2.3:5391821-5391840 | None:intergenic | 35.0% | |
| TGATCCCTGAATTGATTGAA+TGG | + | chr2.3:5392059-5392078 | MS.gene78402:intron | 35.0% | |
| TGATCTTAATGTTCCGTATG+AGG | + | chr2.3:5389272-5389291 | MS.gene78402:CDS | 35.0% | |
| TTACCAACATTGACATCAAG+TGG | - | chr2.3:5389989-5390008 | None:intergenic | 35.0% | |
| TTCATATTCATCCAAGGAGA+AGG | - | chr2.3:5389956-5389975 | None:intergenic | 35.0% | |
| ! | AACTTGTTTACCTGTGTCAT+AGG | - | chr2.3:5390132-5390151 | None:intergenic | 35.0% |
| ! | AATGTTGCTAGTTTCTTTCC+CGG | - | chr2.3:5391156-5391175 | None:intergenic | 35.0% |
| ! | ATGATATATCTAACGGGTAG+GGG | + | chr2.3:5392535-5392554 | MS.gene78402:intron | 35.0% |
| ! | ATTGAGAGCCCTTTTAAACT+GGG | - | chr2.3:5391659-5391678 | None:intergenic | 35.0% |
| ! | CCTGTGAGTTTTTGCAATTA+GGG | + | chr2.3:5389339-5389358 | MS.gene78402:intron | 35.0% |
| ! | TATTGAGAGCCCTTTTAAAC+TGG | - | chr2.3:5391660-5391679 | None:intergenic | 35.0% |
| ! | TCCTGTGAGTTTTTGCAATT+AGG | + | chr2.3:5389338-5389357 | MS.gene78402:intron | 35.0% |
| ! | TGATGATGATTTGGATGACT+TGG | + | chr2.3:5392399-5392418 | MS.gene78402:CDS | 35.0% |
| ! | TTTATAGAGGGATTTTGTGG+GGG | + | chr2.3:5389761-5389780 | MS.gene78402:intron | 35.0% |
| !! | ACAAGGTTTGTTGATCTTGA+TGG | + | chr2.3:5392686-5392705 | MS.gene78402:intron | 35.0% |
| !! | ACTAACAATGTTGGTTCTAG+GGG | + | chr2.3:5391129-5391148 | MS.gene78402:intron | 35.0% |
| !! | AGGAAAAAGTATTTCAGCAG+TGG | - | chr2.3:5389319-5389338 | None:intergenic | 35.0% |
| !! | GAGTTGGCTTGTTAAACTTT+AGG | + | chr2.3:5392585-5392604 | MS.gene78402:intron | 35.0% |
| !! | GGAAAAAGTATTTCAGCAGT+GGG | - | chr2.3:5389318-5389337 | None:intergenic | 35.0% |
| !! | GGTGTTTTGGATTGTTGATA+TGG | + | chr2.3:5389401-5389420 | MS.gene78402:intron | 35.0% |
| !!! | TGAGCCTTATAGTTTTGAAG+TGG | - | chr2.3:5390966-5390985 | None:intergenic | 35.0% |
| AAAAGAACAGTGCACAGAAG+TGG | - | chr2.3:5391074-5391093 | None:intergenic | 40.0% | |
| AACAAAACCCTGTAAGGTGT+TGG | - | chr2.3:5392114-5392133 | None:intergenic | 40.0% | |
| AAGCTGTCCAAGAGTTCATT+TGG | - | chr2.3:5391042-5391061 | None:intergenic | 40.0% | |
| AATTTACGGCTTGAAGCTCT+CGG | - | chr2.3:5388964-5388983 | None:intergenic | 40.0% | |
| AGATCATGAACCGGAGTAAT+CGG | - | chr2.3:5389258-5389277 | None:intergenic | 40.0% | |
| AGGAAAGAAGCTAACACCAA+TGG | - | chr2.3:5391180-5391199 | None:intergenic | 40.0% | |
| AGGTTGTTACCTTGTCAAAC+TGG | - | chr2.3:5392465-5392484 | None:intergenic | 40.0% | |
| ATATTCATCCAAGGAGAAGG+AGG | - | chr2.3:5389953-5389972 | None:intergenic | 40.0% | |
| ATGATGTACAACAGTGAGCT+AGG | - | chr2.3:5391200-5391219 | None:intergenic | 40.0% | |
| CACACTCACACCATAATGAA+AGG | + | chr2.3:5390999-5391018 | MS.gene78402:intron | 40.0% | |
| CACAGGTAAACAAGTTGTTG+AGG | + | chr2.3:5390136-5390155 | MS.gene78402:intron | 40.0% | |
| CCCTAATTGCAAAAACTCAC+AGG | - | chr2.3:5389342-5389361 | None:intergenic | 40.0% | |
| CGATGACATCGATATAAACC+TGG | - | chr2.3:5388874-5388893 | None:intergenic | 40.0% | |
| GAAAAAGTGAGGAGGTGATT+TGG | + | chr2.3:5389718-5389737 | MS.gene78402:intron | 40.0% | |
| GAAACTAGCAACATTGCCAT+TGG | + | chr2.3:5391161-5391180 | MS.gene78402:intron | 40.0% | |
| GAATACTGCCTCTTCTTTCT+TGG | + | chr2.3:5391850-5391869 | MS.gene78402:intron | 40.0% | |
| GAATCGAAGTGTATTCAAGC+TGG | + | chr2.3:5389174-5389193 | MS.gene78402:CDS | 40.0% | |
| GAATGAGTGTCTGTTCAGTT+TGG | + | chr2.3:5391824-5391843 | MS.gene78402:intron | 40.0% | |
| GGATATATACCTCAGCAAGA+TGG | + | chr2.3:5390497-5390516 | MS.gene78402:CDS | 40.0% | |
| GGGGTTTCATATCACTTTGT+TGG | + | chr2.3:5390737-5390756 | MS.gene78402:intron | 40.0% | |
| GGTGGCATGAGAAAAAAGAT+GGG | + | chr2.3:5389695-5389714 | MS.gene78402:intron | 40.0% | |
| GGTTGTTACCTTGTCAAACT+GGG | - | chr2.3:5392464-5392483 | None:intergenic | 40.0% | |
| GTGGCATGAGAAAAAAGATG+GGG | + | chr2.3:5389696-5389715 | MS.gene78402:intron | 40.0% | |
| GTTTGAATCGGAGTTTGCAA+CGG | - | chr2.3:5389446-5389465 | None:intergenic | 40.0% | |
| TATCATATTGCTGTAGCGCT+TGG | - | chr2.3:5392521-5392540 | None:intergenic | 40.0% | |
| TCAAAATGAGGCGGTAAATG+AGG | + | chr2.3:5392345-5392364 | MS.gene78402:CDS | 40.0% | |
| TCTTGTAGCTCAAAATGAGG+CGG | + | chr2.3:5392336-5392355 | MS.gene78402:CDS | 40.0% | |
| TGCTCTTGTAGCTCAAAATG+AGG | + | chr2.3:5392333-5392352 | MS.gene78402:CDS | 40.0% | |
| TGGCATTCTACACTACAAGA+GGG | + | chr2.3:5391093-5391112 | MS.gene78402:intron | 40.0% | |
| TGGTGGCATGAGAAAAAAGA+TGG | + | chr2.3:5389694-5389713 | MS.gene78402:intron | 40.0% | |
| TTCTAATCAGCCTATGACAC+AGG | + | chr2.3:5390119-5390138 | MS.gene78402:CDS | 40.0% | |
| TTGGATTCCAACACCTTACA+GGG | + | chr2.3:5392104-5392123 | MS.gene78402:intron | 40.0% | |
| TTGGCATTCTACACTACAAG+AGG | + | chr2.3:5391092-5391111 | MS.gene78402:intron | 40.0% | |
| TTTCCAGAAGAGTAGTCACT+TGG | - | chr2.3:5389518-5389537 | None:intergenic | 40.0% | |
| ! | ACTTCTGTGCACTGTTCTTT+TGG | + | chr2.3:5391073-5391092 | MS.gene78402:intron | 40.0% |
| ! | ATCGATATAAACCTGGCTTG+TGG | - | chr2.3:5388867-5388886 | None:intergenic | 40.0% |
| ! | GAAAGCACATCATCCTCATA+AGG | - | chr2.3:5391453-5391472 | None:intergenic | 40.0% |
| ! | GCAACAAGTTTTCCTTCACA+AGG | - | chr2.3:5390349-5390368 | None:intergenic | 40.0% |
| ! | TACTCTTCTGGAAATGATGC+TGG | + | chr2.3:5389524-5389543 | MS.gene78402:CDS | 40.0% |
| ! | TCATTTTGAGCTACAAGAGC+AGG | - | chr2.3:5392334-5392353 | None:intergenic | 40.0% |
| ! | TCTAGGATTCCTCAACTTGA+TGG | + | chr2.3:5391420-5391439 | MS.gene78402:CDS | 40.0% |
| ! | TGATATATCTAACGGGTAGG+GGG | + | chr2.3:5392536-5392555 | MS.gene78402:intron | 40.0% |
| ! | TGGAAGTGCACATTAAAGGA+TGG | + | chr2.3:5392628-5392647 | MS.gene78402:CDS | 40.0% |
| ! | TTATAATTTGGAGTCTCCCC+AGG | - | chr2.3:5389482-5389501 | None:intergenic | 40.0% |
| !! | AAAAGTTTGGTGCTGACCAA+TGG | - | chr2.3:5390576-5390595 | None:intergenic | 40.0% |
| !! | AAAGTTTGGTGCTGACCAAT+GGG | - | chr2.3:5390575-5390594 | None:intergenic | 40.0% |
| !! | CCAGGTAAAGGTGTTTGAAT+CGG | - | chr2.3:5389458-5389477 | None:intergenic | 40.0% |
| !! | CTAACAATGTTGGTTCTAGG+GGG | + | chr2.3:5391130-5391149 | MS.gene78402:intron | 40.0% |
| !! | TATCACGTTTTCAAGCTACC+AGG | - | chr2.3:5392216-5392235 | None:intergenic | 40.0% |
| !! | TCATTGACTTGCTCAATTGG+TGG | + | chr2.3:5391272-5391291 | MS.gene78402:intron | 40.0% |
| !! | TTGCACGATTTGGTCTATCA+TGG | + | chr2.3:5390314-5390333 | MS.gene78402:intron | 40.0% |
| !!! | GTCTGGCGATTTTGAAATTG+AGG | + | chr2.3:5390535-5390554 | MS.gene78402:CDS | 40.0% |
| AAACACCTTTACCTGGACCT+GGG | + | chr2.3:5389462-5389481 | MS.gene78402:CDS | 45.0% | |
| AAGATGGGGAAAAAGTGAGG+AGG | + | chr2.3:5389710-5389729 | MS.gene78402:intron | 45.0% | |
| ACTCCAGTGTTCCTCTCAAT+TGG | - | chr2.3:5389213-5389232 | None:intergenic | 45.0% | |
| AGAGGAACACTGGAGTTAAC+AGG | + | chr2.3:5389217-5389236 | MS.gene78402:CDS | 45.0% | |
| ATGGTGTGAGTGTGCATCAT+TGG | - | chr2.3:5390993-5391012 | None:intergenic | 45.0% | |
| CAGGACTTCTTCACAATGAC+TGG | + | chr2.3:5390428-5390447 | MS.gene78402:intron | 45.0% | |
| CAGTCATTGTGAAGAAGTCC+TGG | - | chr2.3:5390430-5390449 | None:intergenic | 45.0% | |
| CCAACATTGACATCAAGTGG+AGG | - | chr2.3:5389986-5390005 | None:intergenic | 45.0% | |
| CCGATTCAAACACCTTTACC+TGG | + | chr2.3:5389455-5389474 | MS.gene78402:CDS | 45.0% | |
| CCTCCACTTGATGTCAATGT+TGG | + | chr2.3:5389983-5390002 | MS.gene78402:CDS | 45.0% | |
| CGATGTCATCGAAGATGTCA+TGG | + | chr2.3:5388883-5388902 | MS.gene78402:CDS | 45.0% | |
| CGCGATGAGTTTGTCAATAC+CGG | + | chr2.3:5388914-5388933 | MS.gene78402:CDS | 45.0% | |
| CTTGGATTCCAACACCTTAC+AGG | + | chr2.3:5392103-5392122 | MS.gene78402:intron | 45.0% | |
| GACTTCTTCACAATGACTGG+TGG | + | chr2.3:5390431-5390450 | MS.gene78402:CDS | 45.0% | |
| GCATTCTACACTACAAGAGG+GGG | + | chr2.3:5391095-5391114 | MS.gene78402:intron | 45.0% | |
| GGAAATGCTGATGTCAAAGC+TGG | + | chr2.3:5389548-5389567 | MS.gene78402:CDS | 45.0% | |
| GGCATTCTACACTACAAGAG+GGG | + | chr2.3:5391094-5391113 | MS.gene78402:intron | 45.0% | |
| GGTACTTGCGTATCAATTGC+AGG | + | chr2.3:5390622-5390641 | MS.gene78402:intron | 45.0% | |
| TACTCCTCAGTTCCCTCATA+CGG | - | chr2.3:5389288-5389307 | None:intergenic | 45.0% | |
| TATCCTCCAGCATCATATGG+TGG | - | chr2.3:5390482-5390501 | None:intergenic | 45.0% | |
| TCACAATGACTGGTGGAAAG+CGG | + | chr2.3:5390438-5390457 | MS.gene78402:CDS | 45.0% | |
| TGATGGTCCGATTCCTTATG+AGG | + | chr2.3:5391437-5391456 | MS.gene78402:CDS | 45.0% | |
| TGCAGGTAGTTCCGTAATAG+TGG | + | chr2.3:5390639-5390658 | MS.gene78402:intron | 45.0% | |
| TGGAAGACAAGCTCCATTCA+TGG | + | chr2.3:5389568-5389587 | MS.gene78402:CDS | 45.0% | |
| TGGCTAACATCACCTTGTGA+AGG | + | chr2.3:5390334-5390353 | MS.gene78402:intron | 45.0% | |
| TGGTGTGAGTGTGCATCATT+GGG | - | chr2.3:5390992-5391011 | None:intergenic | 45.0% | |
| ! | CAGGTGGAAGTGCACATTAA+AGG | + | chr2.3:5392624-5392643 | MS.gene78402:CDS | 45.0% |
| ! | GCTAGCTGGTACTTCTAAGA+AGG | - | chr2.3:5392308-5392327 | None:intergenic | 45.0% |
| ! | TCTTCTGGAAATGATGCTGG+TGG | + | chr2.3:5389527-5389546 | MS.gene78402:CDS | 45.0% |
| !! | AAGTTTGGTGCTGACCAATG+GGG | - | chr2.3:5390574-5390593 | None:intergenic | 45.0% |
| !! | AGTTTTGGCCCAGTTTGACA+AGG | + | chr2.3:5392453-5392472 | MS.gene78402:CDS | 45.0% |
| !! | ATTTGGAGAGACTGGCTTCT+AGG | + | chr2.3:5391403-5391422 | MS.gene78402:CDS | 45.0% |
| !! | AATTAATTAATTGAAAATTA+AGG | - | chr2.3:5389015-5389034 | None:intergenic | 5.0% |
| !! | TATAAATTATTATAAAAGTT+TGG | - | chr2.3:5390589-5390608 | None:intergenic | 5.0% |
| AACACCTTTACCTGGACCTG+GGG | + | chr2.3:5389463-5389482 | MS.gene78402:CDS | 50.0% | |
| AACAGTGCACAGAAGTGGCT+GGG | - | chr2.3:5391069-5391088 | None:intergenic | 50.0% | |
| AATACACTTCTGCAGGCGAC+AGG | + | chr2.3:5392775-5392794 | MS.gene78402:intron | 50.0% | |
| AGCCAGTCTCTCCAAATCTG+CGG | - | chr2.3:5391400-5391419 | None:intergenic | 50.0% | |
| AGGGAAAATGCCCGCAGATT+TGG | + | chr2.3:5391386-5391405 | MS.gene78402:CDS | 50.0% | |
| ATACCTCAGCAAGATGGAGC+TGG | + | chr2.3:5390503-5390522 | MS.gene78402:CDS | 50.0% | |
| ATCAAAGCTCAGACGAGCAC+AGG | - | chr2.3:5391512-5391531 | None:intergenic | 50.0% | |
| ATTCAAGCTGGTGCAGTGCT+AGG | + | chr2.3:5389186-5389205 | MS.gene78402:CDS | 50.0% | |
| ATTGCGCACTGCAGCTTATG+TGG | + | chr2.3:5390068-5390087 | MS.gene78402:intron | 50.0% | |
| CAAACACCTTTACCTGGACC+TGG | + | chr2.3:5389461-5389480 | MS.gene78402:CDS | 50.0% | |
| CAGTGCTAGGTCCAATTGAG+AGG | + | chr2.3:5389199-5389218 | MS.gene78402:CDS | 50.0% | |
| CCTAACCCCACAAAAGGACA+GGG | - | chr2.3:5390775-5390794 | None:intergenic | 50.0% | |
| CCTTCTCCTAACCCCACAAA+AGG | - | chr2.3:5390781-5390800 | None:intergenic | 50.0% | |
| CTAACCCCACAAAAGGACAG+GGG | - | chr2.3:5390774-5390793 | None:intergenic | 50.0% | |
| CTACACTACAAGAGGGGGTT+GGG | + | chr2.3:5391100-5391119 | MS.gene78402:intron | 50.0% | |
| CTGCAGCTTATGTGGAAGGA+CGG | + | chr2.3:5390076-5390095 | MS.gene78402:intron | 50.0% | |
| GAGTAGTCACTTGGTCCAGT+AGG | - | chr2.3:5389509-5389528 | None:intergenic | 50.0% | |
| GAGTTTGTCAATACCGGTGC+TGG | + | chr2.3:5388920-5388939 | MS.gene78402:CDS | 50.0% | |
| GGACCAAGTGACTACTCTTC+TGG | + | chr2.3:5389512-5389531 | MS.gene78402:CDS | 50.0% | |
| GGTAAGTCTCGCACAAGTTC+AGG | + | chr2.3:5390004-5390023 | MS.gene78402:intron | 50.0% | |
| GGTCCAATTGAGAGGAACAC+TGG | + | chr2.3:5389207-5389226 | MS.gene78402:CDS | 50.0% | |
| GTGTGTCTTTATCCCCCCAT+TGG | + | chr2.3:5390557-5390576 | MS.gene78402:intron | 50.0% | |
| TCCTAACCCCACAAAAGGAC+AGG | - | chr2.3:5390776-5390795 | None:intergenic | 50.0% | |
| TCTACACTACAAGAGGGGGT+TGG | + | chr2.3:5391099-5391118 | MS.gene78402:intron | 50.0% | |
| TGAGGCGGTAAATGAGGATG+AGG | + | chr2.3:5392351-5392370 | MS.gene78402:CDS | 50.0% | |
| TGCAGCTTATGTGGAAGGAC+GGG | + | chr2.3:5390077-5390096 | MS.gene78402:intron | 50.0% | |
| TGGAGTTAACAGGCCAATGC+CGG | + | chr2.3:5389227-5389246 | MS.gene78402:CDS | 50.0% | |
| TGTTCCGTATGAGGGAACTG+AGG | + | chr2.3:5389281-5389300 | MS.gene78402:CDS | 50.0% | |
| TTATGTGGAAGGACGGGATG+AGG | + | chr2.3:5390083-5390102 | MS.gene78402:CDS | 50.0% | |
| TTCATCCAAGGAGAAGGAGG+TGG | - | chr2.3:5389950-5389969 | None:intergenic | 50.0% | |
| TTGCCTCCACCATATGATGC+TGG | + | chr2.3:5390473-5390492 | MS.gene78402:CDS | 50.0% | |
| TTGTGGGGTTAGGAGAAGGT+GGG | + | chr2.3:5390782-5390801 | MS.gene78402:intron | 50.0% | |
| TTTGTGGGGTTAGGAGAAGG+TGG | + | chr2.3:5390781-5390800 | MS.gene78402:intron | 50.0% | |
| ! | ACATCCCCTGTCCTTTTGTG+GGG | + | chr2.3:5390767-5390786 | MS.gene78402:intron | 50.0% |
| ! | CACATCCCCTGTCCTTTTGT+GGG | + | chr2.3:5390766-5390785 | MS.gene78402:intron | 50.0% |
| ! | CCTTTTGTGGGGTTAGGAGA+AGG | + | chr2.3:5390778-5390797 | MS.gene78402:intron | 50.0% |
| ! | GGAATCGGACCATCAAGTTG+AGG | - | chr2.3:5391432-5391451 | None:intergenic | 50.0% |
| ! | TCACATCCCCTGTCCTTTTG+TGG | + | chr2.3:5390765-5390784 | MS.gene78402:intron | 50.0% |
| !! | AGTTTGGTGCTGACCAATGG+GGG | - | chr2.3:5390573-5390592 | None:intergenic | 50.0% |
| !! | CACGTTTTCAAGCTACCAGG+AGG | - | chr2.3:5392213-5392232 | None:intergenic | 50.0% |
| CCTCCACCATATGATGCTGG+AGG | + | chr2.3:5390476-5390495 | MS.gene78402:CDS | 55.0% | |
| CCTCCAGCATCATATGGTGG+AGG | - | chr2.3:5390479-5390498 | None:intergenic | 55.0% | |
| CGCACTGCAGCTTATGTGGA+AGG | + | chr2.3:5390072-5390091 | MS.gene78402:intron | 55.0% | |
| GAACAGTGCACAGAAGTGGC+TGG | - | chr2.3:5391070-5391089 | None:intergenic | 55.0% | |
| GCAAATACACCAGCTCCTCC+TGG | + | chr2.3:5392195-5392214 | MS.gene78402:CDS | 55.0% | |
| GCCAGTCTCTCCAAATCTGC+GGG | - | chr2.3:5391399-5391418 | None:intergenic | 55.0% | |
| GGAGTTAACAGGCCAATGCC+GGG | + | chr2.3:5389228-5389247 | MS.gene78402:CDS | 55.0% | |
| TCACCAGCTCCATCTTGCTG+AGG | - | chr2.3:5390509-5390528 | None:intergenic | 55.0% | |
| TCTCGGAGGACTTCATCACC+AGG | - | chr2.3:5388947-5388966 | None:intergenic | 55.0% | |
| TGTGCACTTCCACCTGCTCT+TGG | - | chr2.3:5392620-5392639 | None:intergenic | 55.0% | |
| TGTGGGGTTAGGAGAAGGTG+GGG | + | chr2.3:5390783-5390802 | MS.gene78402:intron | 55.0% | |
| TTACGGCTTGAAGCTCTCGG+AGG | - | chr2.3:5388961-5388980 | None:intergenic | 55.0% | |
| TTCAAGCTACCAGGAGGAGC+TGG | - | chr2.3:5392207-5392226 | None:intergenic | 55.0% | |
| TTCATCACCAGGACCAGCAC+CGG | - | chr2.3:5388936-5388955 | None:intergenic | 55.0% | |
| ! | CCCTGTCCTTTTGTGGGGTT+AGG | + | chr2.3:5390772-5390791 | MS.gene78402:intron | 55.0% |
| ! | GGAGCTGGTGATGCTATGTC+TGG | + | chr2.3:5390518-5390537 | MS.gene78402:CDS | 55.0% |
| !! | AATGTTGGTTCTAGGGGGCC+GGG | + | chr2.3:5391135-5391154 | MS.gene78402:intron | 55.0% |
| !! | ACAAGAGCAGGAGTGCTAGC+TGG | - | chr2.3:5392322-5392341 | None:intergenic | 55.0% |
| !! | CAATGTTGGTTCTAGGGGGC+CGG | + | chr2.3:5391134-5391153 | MS.gene78402:intron | 55.0% |
| !! | GTTTGGTGCTGACCAATGGG+GGG | - | chr2.3:5390572-5390591 | None:intergenic | 55.0% |
| AAGCTCAGACGAGCACAGGC+AGG | - | chr2.3:5391508-5391527 | None:intergenic | 60.0% | |
| ACCGGAGTAATCGGACCACC+CGG | - | chr2.3:5389249-5389268 | None:intergenic | 60.0% | |
| AGGTGACACGCACCAAGAGC+AGG | + | chr2.3:5392605-5392624 | MS.gene78402:intron | 60.0% | |
| GCCCGCAGATTTGGAGAGAC+TGG | + | chr2.3:5391395-5391414 | MS.gene78402:CDS | 60.0% | |
| GGACGGGATGAGGCAGATAG+AGG | + | chr2.3:5390093-5390112 | MS.gene78402:CDS | 60.0% | |
| GGCTGCTTCTACCACAAGCC+AGG | + | chr2.3:5388853-5388872 | MS.gene78402:CDS | 60.0% | |
| GTAATCGGACCACCCGGCAT+TGG | - | chr2.3:5389243-5389262 | None:intergenic | 60.0% | |
| GTCTCCCCAGGTCCAGGTAA+AGG | - | chr2.3:5389470-5389489 | None:intergenic | 60.0% | |
| GTGGGGTTAGGAGAAGGTGG+GGG | + | chr2.3:5390784-5390803 | MS.gene78402:intron | 60.0% | |
| GTTAACAGGCCAATGCCGGG+TGG | + | chr2.3:5389231-5389250 | MS.gene78402:CDS | 60.0% | |
| TGACACGCACCAAGAGCAGG+TGG | + | chr2.3:5392608-5392627 | MS.gene78402:CDS | 60.0% | |
| ! | TTTGGAGTCTCCCCAGGTCC+AGG | - | chr2.3:5389476-5389495 | None:intergenic | 60.0% |
| !! | GTCAATACCGGTGCTGGTCC+TGG | + | chr2.3:5388926-5388945 | MS.gene78402:CDS | 60.0% |
| CCTGCACATTCCACCAGCCC+TGG | - | chr2.3:5390812-5390831 | None:intergenic | 65.0% | |
| CGCAGCCACCTCCTTCTCCT+TGG | + | chr2.3:5389942-5389961 | MS.gene78402:intron | 65.0% | |
| GCCGGGTGGTCCGATTACTC+CGG | + | chr2.3:5389245-5389264 | MS.gene78402:CDS | 65.0% | |
| ! | CCAGGGCTGGTGGAATGTGC+AGG | + | chr2.3:5390809-5390828 | MS.gene78402:intron | 65.0% |
| !! | AGGAGAAGGTGGGGGCACCA+GGG | + | chr2.3:5390792-5390811 | MS.gene78402:intron | 65.0% |
| !! | TAGGAGAAGGTGGGGGCACC+AGG | + | chr2.3:5390791-5390810 | MS.gene78402:intron | 65.0% |
| !! | GAAGGTGGGGGCACCAGGGC+TGG | + | chr2.3:5390796-5390815 | MS.gene78402:intron | 75.0% |
| !!! | GGTGGGGGCACCAGGGCTGG+TGG | + | chr2.3:5390799-5390818 | MS.gene78402:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 5388851 | 5392813 | 5388851 | ID=MS.gene78402 |
| chr2.3 | mRNA | 5388851 | 5392813 | 5388851 | ID=MS.gene78402.t1;Parent=MS.gene78402 |
| chr2.3 | exon | 5388851 | 5388976 | 5388851 | ID=MS.gene78402.t1.exon1;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5388851 | 5388976 | 5388851 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5389168 | 5389341 | 5389168 | ID=MS.gene78402.t1.exon2;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5389168 | 5389341 | 5389168 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5389440 | 5389589 | 5389440 | ID=MS.gene78402.t1.exon3;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5389440 | 5389589 | 5389440 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5389947 | 5390004 | 5389947 | ID=MS.gene78402.t1.exon4;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5389947 | 5390004 | 5389947 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5390082 | 5390140 | 5390082 | ID=MS.gene78402.t1.exon5;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5390082 | 5390140 | 5390082 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5390431 | 5390556 | 5390431 | ID=MS.gene78402.t1.exon6;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5390431 | 5390556 | 5390431 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5391339 | 5391482 | 5391339 | ID=MS.gene78402.t1.exon7;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5391339 | 5391482 | 5391339 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5392153 | 5392216 | 5392153 | ID=MS.gene78402.t1.exon8;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5392153 | 5392216 | 5392153 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5392314 | 5392474 | 5392314 | ID=MS.gene78402.t1.exon9;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5392314 | 5392474 | 5392314 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5392607 | 5392690 | 5392607 | ID=MS.gene78402.t1.exon10;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5392607 | 5392690 | 5392607 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| chr2.3 | exon | 5392790 | 5392813 | 5392790 | ID=MS.gene78402.t1.exon11;Parent=MS.gene78402.t1 |
| chr2.3 | CDS | 5392790 | 5392813 | 5392790 | ID=cds.MS.gene78402.t1;Parent=MS.gene78402.t1 |
| Gene Sequence |
| Protein sequence |
