Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45536.t1 | XP_003597404.1 | 98.7 | 389 | 4 | 1 | 1 | 389 | 1 | 388 | 3.30E-197 | 697.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45536.t1 | Q9USU9 | 23.9 | 414 | 244 | 12 | 1 | 389 | 1 | 368 | 2.6e-09 | 64.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45536.t1 | G7IRY2 | 98.7 | 389 | 4 | 1 | 1 | 389 | 1 | 388 | 2.4e-197 | 697.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052074 | MS.gene45536 | 0.862698 | 4.22E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48819 | MS.gene45536 | PPI |
| MS.gene052074 | MS.gene45536 | PPI |
| MS.gene31113 | MS.gene45536 | PPI |
| MS.gene87743 | MS.gene45536 | PPI |
| MS.gene77045 | MS.gene45536 | PPI |
| MS.gene000676 | MS.gene45536 | PPI |
| MS.gene78402 | MS.gene45536 | PPI |
| MS.gene54331 | MS.gene45536 | PPI |
| MS.gene42075 | MS.gene45536 | PPI |
| MS.gene87064 | MS.gene45536 | PPI |
| MS.gene97439 | MS.gene45536 | PPI |
| MS.gene76728 | MS.gene45536 | PPI |
| MS.gene000324 | MS.gene45536 | PPI |
| MS.gene82237 | MS.gene45536 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45536.t1 | MTR_2g097740 | 98.715 | 389 | 4 | 1 | 1 | 389 | 1 | 388 | 0.0 | 781 |
| MS.gene45536.t1 | MTR_2g097740 | 98.333 | 300 | 4 | 1 | 1 | 300 | 1 | 299 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45536.t1 | AT1G07480 | 59.542 | 393 | 134 | 15 | 2 | 389 | 3 | 375 | 5.77e-117 | 345 |
| MS.gene45536.t1 | AT1G07480 | 59.542 | 393 | 134 | 15 | 2 | 389 | 3 | 375 | 5.77e-117 | 345 |
| MS.gene45536.t1 | AT1G07470 | 59.694 | 392 | 135 | 14 | 2 | 389 | 3 | 375 | 6.95e-117 | 345 |
| MS.gene45536.t1 | AT1G07470 | 59.694 | 392 | 135 | 14 | 2 | 389 | 3 | 375 | 6.95e-117 | 345 |
| MS.gene45536.t1 | AT1G07480 | 58.915 | 387 | 134 | 15 | 2 | 383 | 3 | 369 | 7.11e-112 | 332 |
| MS.gene45536.t1 | AT5G59230 | 53.750 | 80 | 35 | 2 | 311 | 389 | 108 | 186 | 3.45e-14 | 70.9 |
Find 113 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTATCTTGATCATCTTCT+TGG | 0.222109 | 2.1:-6388461 | None:intergenic |
| CCAGTAGGAATGTTATAATT+TGG | 0.250172 | 2.1:-6385532 | None:intergenic |
| AGGGAAAATGCCCGCAGATT+TGG | 0.287913 | 2.1:+6387426 | MS.gene45536:CDS |
| ATTTGGAGAGACTGGCTTCT+AGG | 0.292801 | 2.1:+6387443 | MS.gene45536:CDS |
| TTGTTGCAGATATACAATTA+TGG | 0.335365 | 2.1:+6388182 | MS.gene45536:intron |
| GGACCAAGTGACTACTCTTC+TGG | 0.340039 | 2.1:+6385553 | MS.gene45536:CDS |
| AGGTTGTTACCTTGTCAAAC+TGG | 0.355503 | 2.1:-6388500 | None:intergenic |
| AGATACAAATCATCTAGTTT+TGG | 0.359284 | 2.1:+6388476 | MS.gene45536:CDS |
| TCATCATCATCTTCATTTAG+TGG | 0.365282 | 2.1:-6388420 | None:intergenic |
| TGATCTTAATGTTCCGTATG+AGG | 0.368591 | 2.1:+6385313 | MS.gene45536:CDS |
| CGCAGCCACCTCCTTCTCCT+TGG | 0.376513 | 2.1:+6385983 | MS.gene45536:intron |
| TCTAGGATTCCTCAACTTGA+TGG | 0.388199 | 2.1:+6387460 | MS.gene45536:CDS |
| TGATGGTCCGATTCCTTATG+AGG | 0.391439 | 2.1:+6387477 | MS.gene45536:CDS |
| ACTCCAGTGTTCCTCTCAAT+TGG | 0.392170 | 2.1:-6385251 | None:intergenic |
| AAAATGAACTTTACCATGAA+TGG | 0.405772 | 2.1:-6385622 | None:intergenic |
| TCACAACACACTAATTCAAA+AGG | 0.410420 | 2.1:+6387406 | MS.gene45536:CDS |
| AGATCATGAACCGGAGTAAT+CGG | 0.414812 | 2.1:-6385296 | None:intergenic |
| TGTGCACTTCCACCTGCTCT+TGG | 0.426626 | 2.1:-6388655 | None:intergenic |
| CCAAATTATAACATTCCTAC+TGG | 0.428512 | 2.1:+6385532 | MS.gene45536:CDS |
| CAGGTGGAAGTGCACATTAA+AGG | 0.432895 | 2.1:+6388662 | MS.gene45536:CDS |
| AGAGGAACACTGGAGTTAAC+AGG | 0.440705 | 2.1:+6385258 | MS.gene45536:CDS |
| CGCGATGAGTTTGTCAATAC+CGG | 0.445836 | 2.1:+6384955 | MS.gene45536:CDS |
| ATTAGTGTGTTGTGAATTGA+AGG | 0.450304 | 2.1:-6387398 | None:intergenic |
| GCCCGCAGATTTGGAGAGAC+TGG | 0.455534 | 2.1:+6387435 | MS.gene45536:CDS |
| GTCAATACCGGTGCTGGTCC+TGG | 0.455673 | 2.1:+6384967 | MS.gene45536:CDS |
| TGGAAGACAAGCTCCATTCA+TGG | 0.461106 | 2.1:+6385609 | MS.gene45536:CDS |
| CAAACACCTTTACCTGGACC+TGG | 0.464074 | 2.1:+6385502 | MS.gene45536:CDS |
| TGATGATGATTTGGATGACT+TGG | 0.479256 | 2.1:+6388437 | MS.gene45536:CDS |
| CAGGACTTCTTCACAATGAC+TGG | 0.485430 | 2.1:+6386469 | MS.gene45536:intron |
| GAAAGCACATCATCCTCATA+AGG | 0.485824 | 2.1:-6387490 | None:intergenic |
| TGGAGTTAACAGGCCAATGC+CGG | 0.486906 | 2.1:+6385268 | MS.gene45536:CDS |
| ATTCAAGCTGGTGCAGTGCT+AGG | 0.493773 | 2.1:+6385227 | MS.gene45536:CDS |
| GGCTGCTTCTACCACAAGCC+AGG | 0.495166 | 2.1:+6384894 | MS.gene45536:CDS |
| GAGTTTGTCAATACCGGTGC+TGG | 0.495587 | 2.1:+6384961 | MS.gene45536:CDS |
| GTCTCCCCAGGTCCAGGTAA+AGG | 0.497263 | 2.1:-6385508 | None:intergenic |
| ATATATCCTCCAGCATCATA+TGG | 0.501723 | 2.1:-6386523 | None:intergenic |
| TACTCTTCTGGAAATGATGC+TGG | 0.503251 | 2.1:+6385565 | MS.gene45536:CDS |
| TTCAAGCTACCAGGAGGAGC+TGG | 0.507227 | 2.1:-6388242 | None:intergenic |
| CCGATTCAAACACCTTTACC+TGG | 0.513406 | 2.1:+6385496 | MS.gene45536:CDS |
| GGACGGGATGAGGCAGATAG+AGG | 0.514454 | 2.1:+6386134 | MS.gene45536:CDS |
| GCCAGTCTCTCCAAATCTGC+GGG | 0.514751 | 2.1:-6387436 | None:intergenic |
| CCAGGTAAAGGTGTTTGAAT+CGG | 0.515120 | 2.1:-6385496 | None:intergenic |
| GGAGCTGGTGATGCTATGTC+TGG | 0.517406 | 2.1:+6386559 | MS.gene45536:CDS |
| GTAATCGGACCACCCGGCAT+TGG | 0.517485 | 2.1:-6385281 | None:intergenic |
| ACATCATCCTCATAAGGAAT+CGG | 0.517868 | 2.1:-6387484 | None:intergenic |
| CGATGACATCGATATAAACC+TGG | 0.522288 | 2.1:-6384912 | None:intergenic |
| TTTGGAGTCTCCCCAGGTCC+AGG | 0.523372 | 2.1:-6385514 | None:intergenic |
| GAGTAGTCACTTGGTCCAGT+AGG | 0.523425 | 2.1:-6385547 | None:intergenic |
| ACAAGAGCAGGAGTGCTAGC+TGG | 0.532966 | 2.1:-6388357 | None:intergenic |
| CACAACACACTAATTCAAAA+GGG | 0.534356 | 2.1:+6387407 | MS.gene45536:CDS |
| TCAAAATGAGGCGGTAAATG+AGG | 0.539515 | 2.1:+6388383 | MS.gene45536:CDS |
| GCAAATACACCAGCTCCTCC+TGG | 0.541264 | 2.1:+6388233 | MS.gene45536:CDS |
| TGAGGCGGTAAATGAGGATG+AGG | 0.542954 | 2.1:+6388389 | MS.gene45536:CDS |
| AATACACTTCTGCAGGCGAC+AGG | 0.543940 | 2.1:+6388813 | MS.gene45536:intron |
| TACTCCTCAGTTCCCTCATA+CGG | 0.544761 | 2.1:-6385326 | None:intergenic |
| TGCAGCTTATGTGGAAGGAC+GGG | 0.546675 | 2.1:+6386118 | MS.gene45536:intron |
| TTATAATTTGGAGTCTCCCC+AGG | 0.547927 | 2.1:-6385520 | None:intergenic |
| GGTTGTTACCTTGTCAAACT+GGG | 0.548333 | 2.1:-6388499 | None:intergenic |
| TTCTAATCAGCCTACGACAC+AGG | 0.548776 | 2.1:+6386160 | MS.gene45536:CDS |
| CATCATGCATATAAACAAGA+AGG | 0.552004 | 2.1:+6388689 | MS.gene45536:CDS |
| AGGTGACACGCACCAAGAGC+AGG | 0.553192 | 2.1:+6388643 | MS.gene45536:intron |
| GGAGTTAACAGGCCAATGCC+GGG | 0.554860 | 2.1:+6385269 | MS.gene45536:CDS |
| ATTGCACACTGCAGCTTATG+TGG | 0.558004 | 2.1:+6386109 | MS.gene45536:intron |
| AATTTACGGCTTGAAGCTCT+CGG | 0.558169 | 2.1:-6385002 | None:intergenic |
| CCTCCACTTGATGTCAATGT+TGG | 0.562280 | 2.1:+6386024 | MS.gene45536:CDS |
| TTGCCTCCACCATATGATGC+TGG | 0.562588 | 2.1:+6386514 | MS.gene45536:CDS |
| ATACCTCAGCAAGATGGAGC+TGG | 0.563069 | 2.1:+6386544 | MS.gene45536:CDS |
| GGAAATGCTGATGTCAAAGC+TGG | 0.564505 | 2.1:+6385589 | MS.gene45536:CDS |
| GGATATATACCTCAGCAAGA+TGG | 0.565273 | 2.1:+6386538 | MS.gene45536:CDS |
| CGATGTCATCGAAGATGTCA+TGG | 0.569568 | 2.1:+6384924 | MS.gene45536:CDS |
| TTATGTGGAAGGACGGGATG+AGG | 0.571680 | 2.1:+6386124 | MS.gene45536:CDS |
| TTACCAACATTGACATCAAG+TGG | 0.572587 | 2.1:-6386027 | None:intergenic |
| GTTTGAATCGGAGTTTGCAA+CGG | 0.574992 | 2.1:-6385484 | None:intergenic |
| GGAACATTAAGATCATGAAC+CGG | 0.578096 | 2.1:-6385305 | None:intergenic |
| CTGCAGCTTATGTGGAAGGA+CGG | 0.579332 | 2.1:+6386117 | MS.gene45536:intron |
| GACTTCTTCACAATGACTGG+TGG | 0.579685 | 2.1:+6386472 | MS.gene45536:CDS |
| TTCATCACCAGGACCAGCAC+CGG | 0.582603 | 2.1:-6384974 | None:intergenic |
| AAACACCTTTACCTGGACCT+GGG | 0.585553 | 2.1:+6385503 | MS.gene45536:CDS |
| GATCTTAATGTTCCGTATGA+GGG | 0.585955 | 2.1:+6385314 | MS.gene45536:CDS |
| TTCATATTCATCCAAGGAGA+AGG | 0.587542 | 2.1:-6385994 | None:intergenic |
| GGTCCAATTGAGAGGAACAC+TGG | 0.589679 | 2.1:+6385248 | MS.gene45536:CDS |
| TTGCAGATATACAATTATGG+TGG | 0.593778 | 2.1:+6388185 | MS.gene45536:intron |
| TGCTCTTGTAGCTCAAAATG+AGG | 0.597552 | 2.1:+6388371 | MS.gene45536:CDS |
| GAATCGAAGTGTATTCAAGC+TGG | 0.597656 | 2.1:+6385215 | MS.gene45536:CDS |
| TTTCCAGAAGAGTAGTCACT+TGG | 0.600064 | 2.1:-6385556 | None:intergenic |
| TCTCGGAGGACTTCATCACC+AGG | 0.601821 | 2.1:-6384985 | None:intergenic |
| TTCATCCAAGGAGAAGGAGG+TGG | 0.602567 | 2.1:-6385988 | None:intergenic |
| AACTTGTTTACCTGTGTCGT+AGG | 0.602788 | 2.1:-6386170 | None:intergenic |
| CCTCCAGCATCATATGGTGG+AGG | 0.603099 | 2.1:-6386517 | None:intergenic |
| CTCTGATTCATATTCATCCA+AGG | 0.608051 | 2.1:-6386000 | None:intergenic |
| AGCCAGTCTCTCCAAATCTG+CGG | 0.610071 | 2.1:-6387437 | None:intergenic |
| CACACTGCAGCTTATGTGGA+AGG | 0.612103 | 2.1:+6386113 | MS.gene45536:intron |
| ACCGGAGTAATCGGACCACC+CGG | 0.614149 | 2.1:-6385287 | None:intergenic |
| CAGTGCTAGGTCCAATTGAG+AGG | 0.615366 | 2.1:+6385240 | MS.gene45536:CDS |
| ATCGATATAAACCTGGCTTG+TGG | 0.617594 | 2.1:-6384905 | None:intergenic |
| TGGAAGTGCACATTAAAGGA+TGG | 0.618008 | 2.1:+6388666 | MS.gene45536:CDS |
| CTTGGATGAATATGAATCAG+AGG | 0.618483 | 2.1:+6386001 | MS.gene45536:CDS |
| GCCGGGTGGTCCGATTACTC+CGG | 0.623007 | 2.1:+6385286 | MS.gene45536:CDS |
| GGAATCGGACCATCAAGTTG+AGG | 0.623522 | 2.1:-6387469 | None:intergenic |
| AACACCTTTACCTGGACCTG+GGG | 0.636177 | 2.1:+6385504 | MS.gene45536:CDS |
| ATATTCATCCAAGGAGAAGG+AGG | 0.641539 | 2.1:-6385991 | None:intergenic |
| TCTTCTGGAAATGATGCTGG+TGG | 0.644417 | 2.1:+6385568 | MS.gene45536:CDS |
| CCTCCACCATATGATGCTGG+AGG | 0.647419 | 2.1:+6386517 | MS.gene45536:CDS |
| TCACAATGACTGGTGGAAAG+CGG | 0.647720 | 2.1:+6386479 | MS.gene45536:CDS |
| TGACACGCACCAAGAGCAGG+TGG | 0.657534 | 2.1:+6388646 | MS.gene45536:CDS |
| GAAGGATATTCTCTTCAACA+AGG | 0.659878 | 2.1:+6388707 | MS.gene45536:CDS |
| TCACCAGCTCCATCTTGCTG+AGG | 0.663455 | 2.1:-6386547 | None:intergenic |
| TATCCTCCAGCATCATATGG+TGG | 0.667282 | 2.1:-6386520 | None:intergenic |
| TTACGGCTTGAAGCTCTCGG+AGG | 0.690563 | 2.1:-6384999 | None:intergenic |
| TCTTGTAGCTCAAAATGAGG+CGG | 0.698401 | 2.1:+6388374 | MS.gene45536:CDS |
| GTTAACAGGCCAATGCCGGG+TGG | 0.703646 | 2.1:+6385272 | MS.gene45536:CDS |
| TGTTCCGTATGAGGGAACTG+AGG | 0.717469 | 2.1:+6385322 | MS.gene45536:CDS |
| CCAACATTGACATCAAGTGG+AGG | 0.729595 | 2.1:-6386024 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATTTATGTAAGTT+AGG | + | chr2.1:6386642-6386661 | MS.gene45536:intron | 10.0% |
| !!! | TATTTATTGTTATTTGTTAA+TGG | + | chr2.1:6385420-6385439 | MS.gene45536:intron | 10.0% |
| !!! | TTGAAGAAATTTTTTATTTA+GGG | + | chr2.1:6385120-6385139 | MS.gene45536:intron | 10.0% |
| !!! | TTTGAAGAAATTTTTTATTT+AGG | + | chr2.1:6385119-6385138 | MS.gene45536:intron | 10.0% |
| !! | ATCTATTTACAAATAACTAA+AGG | - | chr2.1:6387643-6387662 | None:intergenic | 15.0% |
| !!! | AAATTTTTTATTTAGGGTTT+TGG | + | chr2.1:6385126-6385145 | MS.gene45536:intron | 15.0% |
| !!! | AATTATATTTTGAAGATTTG+TGG | + | chr2.1:6388278-6388297 | MS.gene45536:intron | 15.0% |
| !!! | TCAATTTAATGGATTAAAAT+AGG | + | chr2.1:6387970-6387989 | MS.gene45536:intron | 15.0% |
| !! | AAAACTACAAGATACAAATT+AGG | - | chr2.1:6386894-6386913 | None:intergenic | 20.0% |
| !! | ATAAAAACATAACTCACATT+TGG | - | chr2.1:6387520-6387539 | None:intergenic | 20.0% |
| !! | ATTGAAAATTAAGGAGAAAA+AGG | - | chr2.1:6385047-6385066 | None:intergenic | 20.0% |
| !! | ATTTACAAATAACTAAAGGT+CGG | - | chr2.1:6387639-6387658 | None:intergenic | 20.0% |
| !! | CAGGTTAATGTTTAATAAAA+CGG | + | chr2.1:6386064-6386083 | MS.gene45536:intron | 20.0% |
| !! | GAAGTCATTAATAGTTTATT+TGG | - | chr2.1:6386979-6386998 | None:intergenic | 20.0% |
| !! | TAACTTCGTAATCAATTTAA+TGG | + | chr2.1:6387959-6387978 | MS.gene45536:intron | 20.0% |
| !! | TGAAGAAATTGTGAAATTTA+CGG | - | chr2.1:6385019-6385038 | None:intergenic | 20.0% |
| !! | TTATTTGTAAATAGATACGT+CGG | + | chr2.1:6387647-6387666 | MS.gene45536:intron | 20.0% |
| !! | TTCAGTTTATTTAATTGTCA+CGG | + | chr2.1:6388780-6388799 | MS.gene45536:intron | 20.0% |
| !! | TTGAAAATTAAGGAGAAAAA+GGG | - | chr2.1:6385046-6385065 | None:intergenic | 20.0% |
| !!! | AGTGTTGATTTATAAAACAA+GGG | + | chr2.1:6386758-6386777 | MS.gene45536:intron | 20.0% |
| !!! | GTAGTTTTAAAAAATTGTTG+TGG | + | chr2.1:6386906-6386925 | MS.gene45536:intron | 20.0% |
| !!! | TCATATATTTTCTTGACATT+TGG | + | chr2.1:6388305-6388324 | MS.gene45536:intron | 20.0% |
| !!! | TTATTTGTTAATGGATGTTT+TGG | + | chr2.1:6385429-6385448 | MS.gene45536:intron | 20.0% |
| !!! | TTGATGATTTGTTTAGATTT+GGG | + | chr2.1:6385193-6385212 | MS.gene45536:intron | 20.0% |
| !!! | TTTGATGATTTGTTTAGATT+TGG | + | chr2.1:6385192-6385211 | MS.gene45536:intron | 20.0% |
| ! | AAAATGAACTTTACCATGAA+TGG | - | chr2.1:6385625-6385644 | None:intergenic | 25.0% |
| ! | AAAGTAACAACTTAGAAAAC+TGG | - | chr2.1:6388001-6388020 | None:intergenic | 25.0% |
| ! | AAATATTACTGTATCCATCT+TGG | - | chr2.1:6388030-6388049 | None:intergenic | 25.0% |
| ! | AATAAACATCTGAAGAGATA+TGG | - | chr2.1:6387791-6387810 | None:intergenic | 25.0% |
| ! | AATACAATGGAAAACATGTT+TGG | - | chr2.1:6385833-6385852 | None:intergenic | 25.0% |
| ! | AATTGACATTACCACTATTA+CGG | - | chr2.1:6386694-6386713 | None:intergenic | 25.0% |
| ! | ACTAATAATCCCAGTTTAAA+AGG | + | chr2.1:6387685-6387704 | MS.gene45536:intron | 25.0% |
| ! | AGCAATATGATATATCTAAC+GGG | + | chr2.1:6388567-6388586 | MS.gene45536:intron | 25.0% |
| ! | CAATTGAGAAACTAATACAA+TGG | - | chr2.1:6385846-6385865 | None:intergenic | 25.0% |
| ! | CAGCAATATGATATATCTAA+CGG | + | chr2.1:6388566-6388585 | MS.gene45536:intron | 25.0% |
| ! | CTAATAATCCCAGTTTAAAA+GGG | + | chr2.1:6387686-6387705 | MS.gene45536:intron | 25.0% |
| ! | CTTCAGATGTTTATTATTCT+AGG | + | chr2.1:6387796-6387815 | MS.gene45536:intron | 25.0% |
| ! | TAAAACAATATTGCACGATT+TGG | + | chr2.1:6386345-6386364 | MS.gene45536:intron | 25.0% |
| ! | TAAACAGTGAAAAAAAGTCA+CGG | + | chr2.1:6387825-6387844 | MS.gene45536:intron | 25.0% |
| ! | TAAATACCCATTAAATGTGT+TGG | - | chr2.1:6386298-6386317 | None:intergenic | 25.0% |
| ! | TAACTTCTTTACATAAGTCT+TGG | + | chr2.1:6388123-6388142 | MS.gene45536:intron | 25.0% |
| ! | TAGATGTTTGAAAAAATTCC+AGG | + | chr2.1:6386450-6386469 | MS.gene45536:intron | 25.0% |
| ! | TGTAATTAACTGAAAGTGAA+AGG | - | chr2.1:6388526-6388545 | None:intergenic | 25.0% |
| ! | TGTATGAATCACAAAAATGA+TGG | + | chr2.1:6385715-6385734 | MS.gene45536:intron | 25.0% |
| ! | TTGTTGCAGATATACAATTA+TGG | + | chr2.1:6388182-6388201 | MS.gene45536:intron | 25.0% |
| ! | TTTACAAATAACTAAAGGTC+GGG | - | chr2.1:6387638-6387657 | None:intergenic | 25.0% |
| !! | ACTGTTGAACATAATCTTTT+AGG | + | chr2.1:6387357-6387376 | MS.gene45536:intron | 25.0% |
| !! | GGGGTTAGATAATATATTTT+GGG | + | chr2.1:6388593-6388612 | MS.gene45536:intron | 25.0% |
| !! | TATTTATAGAGGGATTTTGT+GGG | + | chr2.1:6385800-6385819 | MS.gene45536:intron | 25.0% |
| !! | TTATTTATAGAGGGATTTTG+TGG | + | chr2.1:6385799-6385818 | MS.gene45536:intron | 25.0% |
| !!! | AACATAATCTTTTAGGTATG+TGG | + | chr2.1:6387364-6387383 | MS.gene45536:intron | 25.0% |
| !!! | AATGAGAGTGTTATTTATAG+AGG | + | chr2.1:6385789-6385808 | MS.gene45536:intron | 25.0% |
| !!! | AGATACAAATCATCTAGTTT+TGG | + | chr2.1:6388476-6388495 | MS.gene45536:CDS | 25.0% |
| !!! | AGTTCATTTGGTTTTAGAAA+AGG | - | chr2.1:6387071-6387090 | None:intergenic | 25.0% |
| !!! | ATGAGAGTGTTATTTATAGA+GGG | + | chr2.1:6385790-6385809 | MS.gene45536:intron | 25.0% |
| !!! | ATGTTTTGGATTGTTGATAT+GGG | + | chr2.1:6385443-6385462 | MS.gene45536:intron | 25.0% |
| !!! | GAGTGTTGATTTATAAAACA+AGG | + | chr2.1:6386757-6386776 | MS.gene45536:intron | 25.0% |
| !!! | GATCTGATTAGTTTTGTTTA+GGG | + | chr2.1:6385148-6385167 | MS.gene45536:intron | 25.0% |
| !!! | GTGTTGATTTATAAAACAAG+GGG | + | chr2.1:6386759-6386778 | MS.gene45536:intron | 25.0% |
| AATTAACTGAAAGTGAAAGG+AGG | - | chr2.1:6388523-6388542 | None:intergenic | 30.0% | |
| AGATACAAATTAGGTAGAGA+TGG | - | chr2.1:6386885-6386904 | None:intergenic | 30.0% | |
| ATGAATCACAAAAATGATGG+TGG | + | chr2.1:6385718-6385737 | MS.gene45536:intron | 30.0% | |
| ATTAGTGTGTTGTGAATTGA+AGG | - | chr2.1:6387401-6387420 | None:intergenic | 30.0% | |
| ATTTGATGAGACCTTATTGT+TGG | + | chr2.1:6386232-6386251 | MS.gene45536:intron | 30.0% | |
| CAACAGAAAACAAACATTGA+TGG | - | chr2.1:6386729-6386748 | None:intergenic | 30.0% | |
| CACAACACACTAATTCAAAA+GGG | + | chr2.1:6387407-6387426 | MS.gene45536:CDS | 30.0% | |
| CATCATGCATATAAACAAGA+AGG | + | chr2.1:6388689-6388708 | MS.gene45536:CDS | 30.0% | |
| CATGCTATATGTTTATCATG+AGG | + | chr2.1:6385679-6385698 | MS.gene45536:intron | 30.0% | |
| CCAAATTATAACATTCCTAC+TGG | + | chr2.1:6385532-6385551 | MS.gene45536:CDS | 30.0% | |
| CCAGTAGGAATGTTATAATT+TGG | - | chr2.1:6385535-6385554 | None:intergenic | 30.0% | |
| CTATATGTTTATCATGAGGT+TGG | + | chr2.1:6385683-6385702 | MS.gene45536:intron | 30.0% | |
| CTCATGATAAACATATAGCA+TGG | - | chr2.1:6385681-6385700 | None:intergenic | 30.0% | |
| CTTGTTCCAACACATTTAAT+GGG | + | chr2.1:6386289-6386308 | MS.gene45536:intron | 30.0% | |
| GAATAAAACAAAACCCTGTA+AGG | - | chr2.1:6388158-6388177 | None:intergenic | 30.0% | |
| TAAATGTGTTGGAACAAGAA+AGG | - | chr2.1:6386287-6386306 | None:intergenic | 30.0% | |
| TCACAACACACTAATTCAAA+AGG | + | chr2.1:6387406-6387425 | MS.gene45536:CDS | 30.0% | |
| TCATCATCATCTTCATTTAG+TGG | - | chr2.1:6388423-6388442 | None:intergenic | 30.0% | |
| TCCCAAAATAATTCTGAGTA+GGG | - | chr2.1:6387602-6387621 | None:intergenic | 30.0% | |
| TCTTAAAAGCAGTGAACAAT+AGG | - | chr2.1:6386213-6386232 | None:intergenic | 30.0% | |
| TCTTGTTCCAACACATTTAA+TGG | + | chr2.1:6386288-6386307 | MS.gene45536:intron | 30.0% | |
| TTCCCAAAATAATTCTGAGT+AGG | - | chr2.1:6387603-6387622 | None:intergenic | 30.0% | |
| TTGCAGATATACAATTATGG+TGG | + | chr2.1:6388185-6388204 | MS.gene45536:intron | 30.0% | |
| TTGTATCTTGATCATCTTCT+TGG | - | chr2.1:6388464-6388483 | None:intergenic | 30.0% | |
| TTTGATGAGACCTTATTGTT+GGG | + | chr2.1:6386233-6386252 | MS.gene45536:intron | 30.0% | |
| ! | AAACGGATTTACAATAACGA+TGG | + | chr2.1:6386081-6386100 | MS.gene45536:intron | 30.0% |
| ! | ATATGATATATCTAACGGGT+AGG | + | chr2.1:6388571-6388590 | MS.gene45536:intron | 30.0% |
| ! | ATTTATAGAGGGATTTTGTG+GGG | + | chr2.1:6385801-6385820 | MS.gene45536:intron | 30.0% |
| ! | GGGGGTTAGATAATATATTT+TGG | + | chr2.1:6388592-6388611 | MS.gene45536:intron | 30.0% |
| ! | TATGATATATCTAACGGGTA+GGG | + | chr2.1:6388572-6388591 | MS.gene45536:intron | 30.0% |
| ! | TCCCTACTCAGAATTATTTT+GGG | + | chr2.1:6387598-6387617 | MS.gene45536:intron | 30.0% |
| ! | TCTAAAACCAAATGAACTCT+TGG | + | chr2.1:6387073-6387092 | MS.gene45536:intron | 30.0% |
| ! | TGAAGATGATGATGATGATT+TGG | + | chr2.1:6388428-6388447 | MS.gene45536:CDS | 30.0% |
| ! | TGTGCAATTGATTTAAGCTT+TGG | + | chr2.1:6385878-6385897 | MS.gene45536:intron | 30.0% |
| ! | TTCCCTACTCAGAATTATTT+TGG | + | chr2.1:6387597-6387616 | MS.gene45536:intron | 30.0% |
| !! | AAACTAACAATGTTGGTTCT+AGG | + | chr2.1:6387167-6387186 | MS.gene45536:intron | 30.0% |
| !! | AACTAACAATGTTGGTTCTA+GGG | + | chr2.1:6387168-6387187 | MS.gene45536:intron | 30.0% |
| !! | AATTCATTGACTTGCTCAAT+TGG | + | chr2.1:6387309-6387328 | MS.gene45536:intron | 30.0% |
| !! | ATAATCTTTTAGGTATGTGG+AGG | + | chr2.1:6387367-6387386 | MS.gene45536:intron | 30.0% |
| !! | GATGTTTTGGATTGTTGATA+TGG | + | chr2.1:6385442-6385461 | MS.gene45536:intron | 30.0% |
| !! | TAATCTTTTAGGTATGTGGA+GGG | + | chr2.1:6387368-6387387 | MS.gene45536:intron | 30.0% |
| !! | TGTTTGTTTTCTGTTGTAAG+TGG | + | chr2.1:6386733-6386752 | MS.gene45536:intron | 30.0% |
| !!! | AGTTTTTGAGATATCAAAGC+AGG | - | chr2.1:6388066-6388085 | None:intergenic | 30.0% |
| !!! | GGATCTGATTAGTTTTGTTT+AGG | + | chr2.1:6385147-6385166 | MS.gene45536:intron | 30.0% |
| !!! | GTTACTTTTTGAATCCAAGA+TGG | + | chr2.1:6388013-6388032 | MS.gene45536:intron | 30.0% |
| !!! | TATTTTGGGACTAATAGAGT+TGG | + | chr2.1:6388607-6388626 | MS.gene45536:intron | 30.0% |
| AAAAAGATGGGGAAAAAGTG+AGG | + | chr2.1:6385748-6385767 | MS.gene45536:intron | 35.0% | |
| AAAGGTTCTCCCTTTCATTA+TGG | - | chr2.1:6387053-6387072 | None:intergenic | 35.0% | |
| ACACTCACACCATAATGAAA+GGG | + | chr2.1:6387041-6387060 | MS.gene45536:intron | 35.0% | |
| ACAGGTAAACAAGTTGTTGA+GGG | + | chr2.1:6386178-6386197 | MS.gene45536:intron | 35.0% | |
| ACATCATCCTCATAAGGAAT+CGG | - | chr2.1:6387487-6387506 | None:intergenic | 35.0% | |
| ATATATCCTCCAGCATCATA+TGG | - | chr2.1:6386526-6386545 | None:intergenic | 35.0% | |
| ATGATACAATACACTTCTGC+AGG | + | chr2.1:6388806-6388825 | MS.gene45536:intron | 35.0% | |
| ATGATGAACCAAGAAAGAAG+AGG | - | chr2.1:6387899-6387918 | None:intergenic | 35.0% | |
| ATGCCCATTCAATCAATTCA+GGG | - | chr2.1:6388104-6388123 | None:intergenic | 35.0% | |
| CATAAAACAGCCCAACAATA+AGG | - | chr2.1:6386246-6386265 | None:intergenic | 35.0% | |
| CTCTGATTCATATTCATCCA+AGG | - | chr2.1:6386003-6386022 | None:intergenic | 35.0% | |
| CTTGGATGAATATGAATCAG+AGG | + | chr2.1:6386001-6386020 | MS.gene45536:CDS | 35.0% | |
| GAAGGATATTCTCTTCAACA+AGG | + | chr2.1:6388707-6388726 | MS.gene45536:CDS | 35.0% | |
| GATCCCTGAATTGATTGAAT+GGG | + | chr2.1:6388098-6388117 | MS.gene45536:intron | 35.0% | |
| GATCTTAATGTTCCGTATGA+GGG | + | chr2.1:6385314-6385333 | MS.gene45536:CDS | 35.0% | |
| GGAACATTAAGATCATGAAC+CGG | - | chr2.1:6385308-6385327 | None:intergenic | 35.0% | |
| GGGAAAGAAACTAACAATGT+TGG | + | chr2.1:6387160-6387179 | MS.gene45536:intron | 35.0% | |
| GGGTTTCATATCACTTTGTT+GGG | + | chr2.1:6386779-6386798 | MS.gene45536:intron | 35.0% | |
| TAATTGCAAAAACTCACAGG+AGG | - | chr2.1:6385380-6385399 | None:intergenic | 35.0% | |
| TATGCCCATTCAATCAATTC+AGG | - | chr2.1:6388105-6388124 | None:intergenic | 35.0% | |
| TCAATCAATTCAGGGATCAA+AGG | - | chr2.1:6388096-6388115 | None:intergenic | 35.0% | |
| TCAGCCACTTCAAAACTATA+AGG | + | chr2.1:6387000-6387019 | MS.gene45536:intron | 35.0% | |
| TGAACAGACACTCATTCATA+TGG | - | chr2.1:6387859-6387878 | None:intergenic | 35.0% | |
| TGATCCCTGAATTGATTGAA+TGG | + | chr2.1:6388097-6388116 | MS.gene45536:intron | 35.0% | |
| TGATCTTAATGTTCCGTATG+AGG | + | chr2.1:6385313-6385332 | MS.gene45536:CDS | 35.0% | |
| TTACCAACATTGACATCAAG+TGG | - | chr2.1:6386030-6386049 | None:intergenic | 35.0% | |
| TTCATATTCATCCAAGGAGA+AGG | - | chr2.1:6385997-6386016 | None:intergenic | 35.0% | |
| ! | AATGTTGCTAGTTTCTTTCC+CGG | - | chr2.1:6387196-6387215 | None:intergenic | 35.0% |
| ! | ATGATATATCTAACGGGTAG+GGG | + | chr2.1:6388573-6388592 | MS.gene45536:intron | 35.0% |
| ! | ATTGAGAGCCCTTTTAAACT+GGG | - | chr2.1:6387697-6387716 | None:intergenic | 35.0% |
| ! | CCTGTGAGTTTTTGCAATTA+GGG | + | chr2.1:6385380-6385399 | MS.gene45536:intron | 35.0% |
| ! | TATTGAGAGCCCTTTTAAAC+TGG | - | chr2.1:6387698-6387717 | None:intergenic | 35.0% |
| ! | TCCTGTGAGTTTTTGCAATT+AGG | + | chr2.1:6385379-6385398 | MS.gene45536:intron | 35.0% |
| ! | TGATGATGATTTGGATGACT+TGG | + | chr2.1:6388437-6388456 | MS.gene45536:CDS | 35.0% |
| ! | TTTATAGAGGGATTTTGTGG+GGG | + | chr2.1:6385802-6385821 | MS.gene45536:intron | 35.0% |
| !! | ACAAGGTTTGTTGATCTTGA+TGG | + | chr2.1:6388724-6388743 | MS.gene45536:intron | 35.0% |
| !! | ACTAACAATGTTGGTTCTAG+GGG | + | chr2.1:6387169-6387188 | MS.gene45536:intron | 35.0% |
| !! | AGGAAAAAGTATTTCAGCAG+TGG | - | chr2.1:6385360-6385379 | None:intergenic | 35.0% |
| !! | GAGTTGGCTTGTTAAACTTT+AGG | + | chr2.1:6388623-6388642 | MS.gene45536:intron | 35.0% |
| !! | GGAAAAAGTATTTCAGCAGT+GGG | - | chr2.1:6385359-6385378 | None:intergenic | 35.0% |
| !!! | TGAGCCTTATAGTTTTGAAG+TGG | - | chr2.1:6387007-6387026 | None:intergenic | 35.0% |
| AACAAAACCCTGTAAGGTGT+TGG | - | chr2.1:6388152-6388171 | None:intergenic | 40.0% | |
| AAGCTGTCCAAGAGTTCATT+TGG | - | chr2.1:6387083-6387102 | None:intergenic | 40.0% | |
| AATTTACGGCTTGAAGCTCT+CGG | - | chr2.1:6385005-6385024 | None:intergenic | 40.0% | |
| AGATCATGAACCGGAGTAAT+CGG | - | chr2.1:6385299-6385318 | None:intergenic | 40.0% | |
| AGGAAAGAAGCTAACACCAA+TGG | - | chr2.1:6387220-6387239 | None:intergenic | 40.0% | |
| AGGTTGTTACCTTGTCAAAC+TGG | - | chr2.1:6388503-6388522 | None:intergenic | 40.0% | |
| ATATTCATCCAAGGAGAAGG+AGG | - | chr2.1:6385994-6386013 | None:intergenic | 40.0% | |
| ATGATGTACAACAGTGAGCT+AGG | - | chr2.1:6387240-6387259 | None:intergenic | 40.0% | |
| CACACTCACACCATAATGAA+AGG | + | chr2.1:6387040-6387059 | MS.gene45536:intron | 40.0% | |
| CACAGGTAAACAAGTTGTTG+AGG | + | chr2.1:6386177-6386196 | MS.gene45536:intron | 40.0% | |
| CCCTAATTGCAAAAACTCAC+AGG | - | chr2.1:6385383-6385402 | None:intergenic | 40.0% | |
| CGATGACATCGATATAAACC+TGG | - | chr2.1:6384915-6384934 | None:intergenic | 40.0% | |
| GAAAAAGTGAGGAGGTGATT+TGG | + | chr2.1:6385759-6385778 | MS.gene45536:intron | 40.0% | |
| GAAACTAGCAACATTGCCAT+TGG | + | chr2.1:6387201-6387220 | MS.gene45536:intron | 40.0% | |
| GAATACTGCCTCTTCTTTCT+TGG | + | chr2.1:6387888-6387907 | MS.gene45536:intron | 40.0% | |
| GAATCGAAGTGTATTCAAGC+TGG | + | chr2.1:6385215-6385234 | MS.gene45536:CDS | 40.0% | |
| GAATGAGTGTCTGTTCAGTT+TGG | + | chr2.1:6387862-6387881 | MS.gene45536:intron | 40.0% | |
| GGATATATACCTCAGCAAGA+TGG | + | chr2.1:6386538-6386557 | MS.gene45536:CDS | 40.0% | |
| GGGGTTTCATATCACTTTGT+TGG | + | chr2.1:6386778-6386797 | MS.gene45536:intron | 40.0% | |
| GGTGGCATGAGAAAAAAGAT+GGG | + | chr2.1:6385736-6385755 | MS.gene45536:intron | 40.0% | |
| GGTTGTTACCTTGTCAAACT+GGG | - | chr2.1:6388502-6388521 | None:intergenic | 40.0% | |
| GTGGCATGAGAAAAAAGATG+GGG | + | chr2.1:6385737-6385756 | MS.gene45536:intron | 40.0% | |
| GTTTGAATCGGAGTTTGCAA+CGG | - | chr2.1:6385487-6385506 | None:intergenic | 40.0% | |
| TATCATATTGCTGTAGCGCT+TGG | - | chr2.1:6388559-6388578 | None:intergenic | 40.0% | |
| TCAAAATGAGGCGGTAAATG+AGG | + | chr2.1:6388383-6388402 | MS.gene45536:CDS | 40.0% | |
| TCTTGTAGCTCAAAATGAGG+CGG | + | chr2.1:6388374-6388393 | MS.gene45536:CDS | 40.0% | |
| TGCTCTTGTAGCTCAAAATG+AGG | + | chr2.1:6388371-6388390 | MS.gene45536:CDS | 40.0% | |
| TGGCATTCTACACTACAAGA+GGG | + | chr2.1:6387133-6387152 | MS.gene45536:intron | 40.0% | |
| TGGTGGCATGAGAAAAAAGA+TGG | + | chr2.1:6385735-6385754 | MS.gene45536:intron | 40.0% | |
| TTGGATTCCAACACCTTACA+GGG | + | chr2.1:6388142-6388161 | MS.gene45536:intron | 40.0% | |
| TTGGCATTCTACACTACAAG+AGG | + | chr2.1:6387132-6387151 | MS.gene45536:intron | 40.0% | |
| TTTCCAGAAGAGTAGTCACT+TGG | - | chr2.1:6385559-6385578 | None:intergenic | 40.0% | |
| ! | AACTTGTTTACCTGTGTCGT+AGG | - | chr2.1:6386173-6386192 | None:intergenic | 40.0% |
| ! | ACTTCTGTGCACTGTTCTTT+TGG | + | chr2.1:6387113-6387132 | MS.gene45536:intron | 40.0% |
| ! | ATCGATATAAACCTGGCTTG+TGG | - | chr2.1:6384908-6384927 | None:intergenic | 40.0% |
| ! | GAAAGCACATCATCCTCATA+AGG | - | chr2.1:6387493-6387512 | None:intergenic | 40.0% |
| ! | GCAACAAGTTTTCCTTCACA+AGG | - | chr2.1:6386390-6386409 | None:intergenic | 40.0% |
| ! | TACTCTTCTGGAAATGATGC+TGG | + | chr2.1:6385565-6385584 | MS.gene45536:CDS | 40.0% |
| ! | TCATTTTGAGCTACAAGAGC+AGG | - | chr2.1:6388372-6388391 | None:intergenic | 40.0% |
| ! | TCTAGGATTCCTCAACTTGA+TGG | + | chr2.1:6387460-6387479 | MS.gene45536:CDS | 40.0% |
| ! | TGATATATCTAACGGGTAGG+GGG | + | chr2.1:6388574-6388593 | MS.gene45536:intron | 40.0% |
| ! | TGGAAGTGCACATTAAAGGA+TGG | + | chr2.1:6388666-6388685 | MS.gene45536:CDS | 40.0% |
| ! | TTATAATTTGGAGTCTCCCC+AGG | - | chr2.1:6385523-6385542 | None:intergenic | 40.0% |
| !! | AAAAGTTTGGTGCTGACCAA+TGG | - | chr2.1:6386617-6386636 | None:intergenic | 40.0% |
| !! | AAAGTTTGGTGCTGACCAAT+GGG | - | chr2.1:6386616-6386635 | None:intergenic | 40.0% |
| !! | CCAGGTAAAGGTGTTTGAAT+CGG | - | chr2.1:6385499-6385518 | None:intergenic | 40.0% |
| !! | CTAACAATGTTGGTTCTAGG+GGG | + | chr2.1:6387170-6387189 | MS.gene45536:intron | 40.0% |
| !! | TATCACGTTTTCAAGCTACC+AGG | - | chr2.1:6388254-6388273 | None:intergenic | 40.0% |
| !! | TCATTGACTTGCTCAATTGG+TGG | + | chr2.1:6387312-6387331 | MS.gene45536:intron | 40.0% |
| !! | TTGCACGATTTGGTCTATCA+TGG | + | chr2.1:6386355-6386374 | MS.gene45536:intron | 40.0% |
| !!! | GTCTGGCGATTTTGAAATTG+AGG | + | chr2.1:6386576-6386595 | MS.gene45536:CDS | 40.0% |
| AAACACCTTTACCTGGACCT+GGG | + | chr2.1:6385503-6385522 | MS.gene45536:CDS | 45.0% | |
| AAGATGGGGAAAAAGTGAGG+AGG | + | chr2.1:6385751-6385770 | MS.gene45536:intron | 45.0% | |
| ACTCCAGTGTTCCTCTCAAT+TGG | - | chr2.1:6385254-6385273 | None:intergenic | 45.0% | |
| AGAGGAACACTGGAGTTAAC+AGG | + | chr2.1:6385258-6385277 | MS.gene45536:CDS | 45.0% | |
| ATGGTGTGAGTGTGCATCAT+TGG | - | chr2.1:6387034-6387053 | None:intergenic | 45.0% | |
| ATTGCACACTGCAGCTTATG+TGG | + | chr2.1:6386109-6386128 | MS.gene45536:intron | 45.0% | |
| CAGGACTTCTTCACAATGAC+TGG | + | chr2.1:6386469-6386488 | MS.gene45536:intron | 45.0% | |
| CAGTCATTGTGAAGAAGTCC+TGG | - | chr2.1:6386471-6386490 | None:intergenic | 45.0% | |
| CCAACATTGACATCAAGTGG+AGG | - | chr2.1:6386027-6386046 | None:intergenic | 45.0% | |
| CCGATTCAAACACCTTTACC+TGG | + | chr2.1:6385496-6385515 | MS.gene45536:CDS | 45.0% | |
| CCTCCACTTGATGTCAATGT+TGG | + | chr2.1:6386024-6386043 | MS.gene45536:CDS | 45.0% | |
| CGATGTCATCGAAGATGTCA+TGG | + | chr2.1:6384924-6384943 | MS.gene45536:CDS | 45.0% | |
| CGCGATGAGTTTGTCAATAC+CGG | + | chr2.1:6384955-6384974 | MS.gene45536:CDS | 45.0% | |
| CTTGGATTCCAACACCTTAC+AGG | + | chr2.1:6388141-6388160 | MS.gene45536:intron | 45.0% | |
| GACTTCTTCACAATGACTGG+TGG | + | chr2.1:6386472-6386491 | MS.gene45536:CDS | 45.0% | |
| GCATTCTACACTACAAGAGG+GGG | + | chr2.1:6387135-6387154 | MS.gene45536:intron | 45.0% | |
| GGAAATGCTGATGTCAAAGC+TGG | + | chr2.1:6385589-6385608 | MS.gene45536:CDS | 45.0% | |
| GGCATTCTACACTACAAGAG+GGG | + | chr2.1:6387134-6387153 | MS.gene45536:intron | 45.0% | |
| GGTACTTGCGTATCAATTGC+AGG | + | chr2.1:6386663-6386682 | MS.gene45536:intron | 45.0% | |
| TACTCCTCAGTTCCCTCATA+CGG | - | chr2.1:6385329-6385348 | None:intergenic | 45.0% | |
| TATCCTCCAGCATCATATGG+TGG | - | chr2.1:6386523-6386542 | None:intergenic | 45.0% | |
| TCACAATGACTGGTGGAAAG+CGG | + | chr2.1:6386479-6386498 | MS.gene45536:CDS | 45.0% | |
| TGATGGTCCGATTCCTTATG+AGG | + | chr2.1:6387477-6387496 | MS.gene45536:CDS | 45.0% | |
| TGCAGGTAGTTCCGTAATAG+TGG | + | chr2.1:6386680-6386699 | MS.gene45536:intron | 45.0% | |
| TGGAAGACAAGCTCCATTCA+TGG | + | chr2.1:6385609-6385628 | MS.gene45536:CDS | 45.0% | |
| TGGCTAACATCACCTTGTGA+AGG | + | chr2.1:6386375-6386394 | MS.gene45536:intron | 45.0% | |
| TGGTGTGAGTGTGCATCATT+GGG | - | chr2.1:6387033-6387052 | None:intergenic | 45.0% | |
| TTCTAATCAGCCTACGACAC+AGG | + | chr2.1:6386160-6386179 | MS.gene45536:CDS | 45.0% | |
| ! | CAGGTGGAAGTGCACATTAA+AGG | + | chr2.1:6388662-6388681 | MS.gene45536:CDS | 45.0% |
| ! | GCTAGCTGGTACTTCTAAGA+AGG | - | chr2.1:6388346-6388365 | None:intergenic | 45.0% |
| ! | TCTTCTGGAAATGATGCTGG+TGG | + | chr2.1:6385568-6385587 | MS.gene45536:CDS | 45.0% |
| !! | AAGTTTGGTGCTGACCAATG+GGG | - | chr2.1:6386615-6386634 | None:intergenic | 45.0% |
| !! | AGTTTTGGCCCAGTTTGACA+AGG | + | chr2.1:6388491-6388510 | MS.gene45536:CDS | 45.0% |
| !! | ATTTGGAGAGACTGGCTTCT+AGG | + | chr2.1:6387443-6387462 | MS.gene45536:CDS | 45.0% |
| !! | AATTAATTAATTGAAAATTA+AGG | - | chr2.1:6385056-6385075 | None:intergenic | 5.0% |
| !! | TATAAATTATTATAAAAGTT+TGG | - | chr2.1:6386630-6386649 | None:intergenic | 5.0% |
| AACACCTTTACCTGGACCTG+GGG | + | chr2.1:6385504-6385523 | MS.gene45536:CDS | 50.0% | |
| AATACACTTCTGCAGGCGAC+AGG | + | chr2.1:6388813-6388832 | MS.gene45536:intron | 50.0% | |
| AGCCAGTCTCTCCAAATCTG+CGG | - | chr2.1:6387440-6387459 | None:intergenic | 50.0% | |
| AGGGAAAATGCCCGCAGATT+TGG | + | chr2.1:6387426-6387445 | MS.gene45536:CDS | 50.0% | |
| ATACCTCAGCAAGATGGAGC+TGG | + | chr2.1:6386544-6386563 | MS.gene45536:CDS | 50.0% | |
| ATCAAAGCTCAGACGAGCAC+AGG | - | chr2.1:6387552-6387571 | None:intergenic | 50.0% | |
| ATTCAAGCTGGTGCAGTGCT+AGG | + | chr2.1:6385227-6385246 | MS.gene45536:CDS | 50.0% | |
| CAAACACCTTTACCTGGACC+TGG | + | chr2.1:6385502-6385521 | MS.gene45536:CDS | 50.0% | |
| CACACTGCAGCTTATGTGGA+AGG | + | chr2.1:6386113-6386132 | MS.gene45536:intron | 50.0% | |
| CAGTGCTAGGTCCAATTGAG+AGG | + | chr2.1:6385240-6385259 | MS.gene45536:CDS | 50.0% | |
| CCTAACCCCACAAAAGGACA+GGG | - | chr2.1:6386816-6386835 | None:intergenic | 50.0% | |
| CCTTCTCCTAACCCCACAAA+AGG | - | chr2.1:6386822-6386841 | None:intergenic | 50.0% | |
| CTAACCCCACAAAAGGACAG+GGG | - | chr2.1:6386815-6386834 | None:intergenic | 50.0% | |
| CTACACTACAAGAGGGGGTT+GGG | + | chr2.1:6387140-6387159 | MS.gene45536:intron | 50.0% | |
| CTGCAGCTTATGTGGAAGGA+CGG | + | chr2.1:6386117-6386136 | MS.gene45536:intron | 50.0% | |
| GAGTAGTCACTTGGTCCAGT+AGG | - | chr2.1:6385550-6385569 | None:intergenic | 50.0% | |
| GAGTTTGTCAATACCGGTGC+TGG | + | chr2.1:6384961-6384980 | MS.gene45536:CDS | 50.0% | |
| GGACCAAGTGACTACTCTTC+TGG | + | chr2.1:6385553-6385572 | MS.gene45536:CDS | 50.0% | |
| GGTAAGTCTCGCACAAGTTC+AGG | + | chr2.1:6386045-6386064 | MS.gene45536:intron | 50.0% | |
| GGTCCAATTGAGAGGAACAC+TGG | + | chr2.1:6385248-6385267 | MS.gene45536:CDS | 50.0% | |
| GTGTGTCTTTATCCCCCCAT+TGG | + | chr2.1:6386598-6386617 | MS.gene45536:intron | 50.0% | |
| TCCTAACCCCACAAAAGGAC+AGG | - | chr2.1:6386817-6386836 | None:intergenic | 50.0% | |
| TCTACACTACAAGAGGGGGT+TGG | + | chr2.1:6387139-6387158 | MS.gene45536:intron | 50.0% | |
| TGAGGCGGTAAATGAGGATG+AGG | + | chr2.1:6388389-6388408 | MS.gene45536:CDS | 50.0% | |
| TGCAGCTTATGTGGAAGGAC+GGG | + | chr2.1:6386118-6386137 | MS.gene45536:intron | 50.0% | |
| TGGAGTTAACAGGCCAATGC+CGG | + | chr2.1:6385268-6385287 | MS.gene45536:CDS | 50.0% | |
| TGTTCCGTATGAGGGAACTG+AGG | + | chr2.1:6385322-6385341 | MS.gene45536:CDS | 50.0% | |
| TTATGTGGAAGGACGGGATG+AGG | + | chr2.1:6386124-6386143 | MS.gene45536:CDS | 50.0% | |
| TTCATCCAAGGAGAAGGAGG+TGG | - | chr2.1:6385991-6386010 | None:intergenic | 50.0% | |
| TTGCCTCCACCATATGATGC+TGG | + | chr2.1:6386514-6386533 | MS.gene45536:CDS | 50.0% | |
| TTGTGGGGTTAGGAGAAGGT+GGG | + | chr2.1:6386823-6386842 | MS.gene45536:intron | 50.0% | |
| TTTGTGGGGTTAGGAGAAGG+TGG | + | chr2.1:6386822-6386841 | MS.gene45536:intron | 50.0% | |
| ! | ACATCCCCTGTCCTTTTGTG+GGG | + | chr2.1:6386808-6386827 | MS.gene45536:intron | 50.0% |
| ! | AGAACAGTGCACAGAAGTGC+TGG | - | chr2.1:6387111-6387130 | None:intergenic | 50.0% |
| ! | CACATCCCCTGTCCTTTTGT+GGG | + | chr2.1:6386807-6386826 | MS.gene45536:intron | 50.0% |
| ! | CCTTTTGTGGGGTTAGGAGA+AGG | + | chr2.1:6386819-6386838 | MS.gene45536:intron | 50.0% |
| ! | GGAATCGGACCATCAAGTTG+AGG | - | chr2.1:6387472-6387491 | None:intergenic | 50.0% |
| ! | TCACATCCCCTGTCCTTTTG+TGG | + | chr2.1:6386806-6386825 | MS.gene45536:intron | 50.0% |
| !! | AGTTTGGTGCTGACCAATGG+GGG | - | chr2.1:6386614-6386633 | None:intergenic | 50.0% |
| !! | CACGTTTTCAAGCTACCAGG+AGG | - | chr2.1:6388251-6388270 | None:intergenic | 50.0% |
| !! | GAACAGTGCACAGAAGTGCT+GGG | - | chr2.1:6387110-6387129 | None:intergenic | 50.0% |
| CCTCCACCATATGATGCTGG+AGG | + | chr2.1:6386517-6386536 | MS.gene45536:CDS | 55.0% | |
| CCTCCAGCATCATATGGTGG+AGG | - | chr2.1:6386520-6386539 | None:intergenic | 55.0% | |
| GCAAATACACCAGCTCCTCC+TGG | + | chr2.1:6388233-6388252 | MS.gene45536:CDS | 55.0% | |
| GCCAGTCTCTCCAAATCTGC+GGG | - | chr2.1:6387439-6387458 | None:intergenic | 55.0% | |
| GGAGTTAACAGGCCAATGCC+GGG | + | chr2.1:6385269-6385288 | MS.gene45536:CDS | 55.0% | |
| TCACCAGCTCCATCTTGCTG+AGG | - | chr2.1:6386550-6386569 | None:intergenic | 55.0% | |
| TCTCGGAGGACTTCATCACC+AGG | - | chr2.1:6384988-6385007 | None:intergenic | 55.0% | |
| TGTGCACTTCCACCTGCTCT+TGG | - | chr2.1:6388658-6388677 | None:intergenic | 55.0% | |
| TGTGGGGTTAGGAGAAGGTG+GGG | + | chr2.1:6386824-6386843 | MS.gene45536:intron | 55.0% | |
| TTACGGCTTGAAGCTCTCGG+AGG | - | chr2.1:6385002-6385021 | None:intergenic | 55.0% | |
| TTCAAGCTACCAGGAGGAGC+TGG | - | chr2.1:6388245-6388264 | None:intergenic | 55.0% | |
| TTCATCACCAGGACCAGCAC+CGG | - | chr2.1:6384977-6384996 | None:intergenic | 55.0% | |
| ! | CCCTGTCCTTTTGTGGGGTT+AGG | + | chr2.1:6386813-6386832 | MS.gene45536:intron | 55.0% |
| ! | GGAGCTGGTGATGCTATGTC+TGG | + | chr2.1:6386559-6386578 | MS.gene45536:CDS | 55.0% |
| !! | AATGTTGGTTCTAGGGGGCC+GGG | + | chr2.1:6387175-6387194 | MS.gene45536:intron | 55.0% |
| !! | ACAAGAGCAGGAGTGCTAGC+TGG | - | chr2.1:6388360-6388379 | None:intergenic | 55.0% |
| !! | CAATGTTGGTTCTAGGGGGC+CGG | + | chr2.1:6387174-6387193 | MS.gene45536:intron | 55.0% |
| !! | GTTTGGTGCTGACCAATGGG+GGG | - | chr2.1:6386613-6386632 | None:intergenic | 55.0% |
| AAGCTCAGACGAGCACAGGC+AGG | - | chr2.1:6387548-6387567 | None:intergenic | 60.0% | |
| ACCGGAGTAATCGGACCACC+CGG | - | chr2.1:6385290-6385309 | None:intergenic | 60.0% | |
| AGGTGACACGCACCAAGAGC+AGG | + | chr2.1:6388643-6388662 | MS.gene45536:intron | 60.0% | |
| GCCCGCAGATTTGGAGAGAC+TGG | + | chr2.1:6387435-6387454 | MS.gene45536:CDS | 60.0% | |
| GGACGGGATGAGGCAGATAG+AGG | + | chr2.1:6386134-6386153 | MS.gene45536:CDS | 60.0% | |
| GGCTGCTTCTACCACAAGCC+AGG | + | chr2.1:6384894-6384913 | MS.gene45536:CDS | 60.0% | |
| GTAATCGGACCACCCGGCAT+TGG | - | chr2.1:6385284-6385303 | None:intergenic | 60.0% | |
| GTCTCCCCAGGTCCAGGTAA+AGG | - | chr2.1:6385511-6385530 | None:intergenic | 60.0% | |
| GTGGGGTTAGGAGAAGGTGG+GGG | + | chr2.1:6386825-6386844 | MS.gene45536:intron | 60.0% | |
| GTTAACAGGCCAATGCCGGG+TGG | + | chr2.1:6385272-6385291 | MS.gene45536:CDS | 60.0% | |
| TGACACGCACCAAGAGCAGG+TGG | + | chr2.1:6388646-6388665 | MS.gene45536:CDS | 60.0% | |
| ! | TTTGGAGTCTCCCCAGGTCC+AGG | - | chr2.1:6385517-6385536 | None:intergenic | 60.0% |
| !! | GTCAATACCGGTGCTGGTCC+TGG | + | chr2.1:6384967-6384986 | MS.gene45536:CDS | 60.0% |
| CCTGCACATTCCACCAGCCC+TGG | - | chr2.1:6386853-6386872 | None:intergenic | 65.0% | |
| CGCAGCCACCTCCTTCTCCT+TGG | + | chr2.1:6385983-6386002 | MS.gene45536:intron | 65.0% | |
| GCCGGGTGGTCCGATTACTC+CGG | + | chr2.1:6385286-6385305 | MS.gene45536:CDS | 65.0% | |
| ! | CCAGGGCTGGTGGAATGTGC+AGG | + | chr2.1:6386850-6386869 | MS.gene45536:intron | 65.0% |
| !! | AGGAGAAGGTGGGGGCACCA+GGG | + | chr2.1:6386833-6386852 | MS.gene45536:intron | 65.0% |
| !! | TAGGAGAAGGTGGGGGCACC+AGG | + | chr2.1:6386832-6386851 | MS.gene45536:intron | 65.0% |
| !! | GAAGGTGGGGGCACCAGGGC+TGG | + | chr2.1:6386837-6386856 | MS.gene45536:intron | 75.0% |
| !!! | GGTGGGGGCACCAGGGCTGG+TGG | + | chr2.1:6386840-6386859 | MS.gene45536:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 6384892 | 6388851 | 6384892 | ID=MS.gene45536 |
| chr2.1 | mRNA | 6384892 | 6388851 | 6384892 | ID=MS.gene45536.t1;Parent=MS.gene45536 |
| chr2.1 | exon | 6384892 | 6385017 | 6384892 | ID=MS.gene45536.t1.exon1;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6384892 | 6385017 | 6384892 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6385209 | 6385382 | 6385209 | ID=MS.gene45536.t1.exon2;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6385209 | 6385382 | 6385209 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6385481 | 6385630 | 6385481 | ID=MS.gene45536.t1.exon3;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6385481 | 6385630 | 6385481 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6385988 | 6386045 | 6385988 | ID=MS.gene45536.t1.exon4;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6385988 | 6386045 | 6385988 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6386123 | 6386181 | 6386123 | ID=MS.gene45536.t1.exon5;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6386123 | 6386181 | 6386123 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6386472 | 6386597 | 6386472 | ID=MS.gene45536.t1.exon6;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6386472 | 6386597 | 6386472 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6387379 | 6387522 | 6387379 | ID=MS.gene45536.t1.exon7;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6387379 | 6387522 | 6387379 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6388191 | 6388254 | 6388191 | ID=MS.gene45536.t1.exon8;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6388191 | 6388254 | 6388191 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6388352 | 6388512 | 6388352 | ID=MS.gene45536.t1.exon9;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6388352 | 6388512 | 6388352 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6388645 | 6388728 | 6388645 | ID=MS.gene45536.t1.exon10;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6388645 | 6388728 | 6388645 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| chr2.1 | exon | 6388828 | 6388851 | 6388828 | ID=MS.gene45536.t1.exon11;Parent=MS.gene45536.t1 |
| chr2.1 | CDS | 6388828 | 6388851 | 6388828 | ID=cds.MS.gene45536.t1;Parent=MS.gene45536.t1 |
| Gene Sequence |
| Protein sequence |
