AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052074

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052074.t1 MTR_2g097740 98.972 389 3 1 1 389 1 388 0.0 783
MS.gene052074.t1 MTR_2g097740 98.667 300 3 1 1 300 1 299 0.0 602
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052074.t1 AT1G07480 59.542 393 134 15 2 389 3 375 1.84e-117 346
MS.gene052074.t1 AT1G07480 59.542 393 134 15 2 389 3 375 1.84e-117 346
MS.gene052074.t1 AT1G07470 59.694 392 135 14 2 389 3 375 2.61e-117 346
MS.gene052074.t1 AT1G07470 59.694 392 135 14 2 389 3 375 2.61e-117 346
MS.gene052074.t1 AT1G07480 58.915 387 134 15 2 383 3 369 2.82e-112 333
MS.gene052074.t1 AT5G59230 53.750 80 35 2 311 389 108 186 3.80e-14 70.9

Find 113 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATCTTGATCATCTTCT+TGG 0.222109 2.2:-4796962 None:intergenic
CCAGTAGGAATGTTATAATT+TGG 0.250172 2.2:-4794033 None:intergenic
AGGGAAAATGCCCGCAGATT+TGG 0.287913 2.2:+4795927 MS.gene052074:CDS
ATTTGGAGAGACTGGCTTCT+AGG 0.292801 2.2:+4795944 MS.gene052074:CDS
TTGTTGCAGATATACAATTA+TGG 0.335365 2.2:+4796683 MS.gene052074:intron
GGACCAAGTGACTACTCTTC+TGG 0.340039 2.2:+4794054 MS.gene052074:CDS
AGGTTGTTACCTTGTCAAAC+TGG 0.355503 2.2:-4797001 None:intergenic
AGATACAAATCATCTAGTTT+TGG 0.359284 2.2:+4796977 MS.gene052074:CDS
TCATCATCATCTTCATTTAG+TGG 0.365282 2.2:-4796921 None:intergenic
TGATCTTAATGTTCCGTATG+AGG 0.368591 2.2:+4793814 MS.gene052074:CDS
CGCAGCCACCTCCTTCTCCT+TGG 0.376513 2.2:+4794484 MS.gene052074:intron
TCTAGGATTCCTCAACTTGA+TGG 0.388199 2.2:+4795961 MS.gene052074:CDS
TGATGGTCCGATTCCTTATG+AGG 0.391439 2.2:+4795978 MS.gene052074:CDS
ACTCCAGTGTTCCTCTCAAT+TGG 0.392170 2.2:-4793752 None:intergenic
AACTTGTTTACCTGTGTCAT+AGG 0.398979 2.2:-4794671 None:intergenic
AAAATGAACTTTACCATGAA+TGG 0.405772 2.2:-4794123 None:intergenic
TCACAACACACTAATTCAAA+AGG 0.410420 2.2:+4795907 MS.gene052074:CDS
AGATCATGAACCGGAGTAAT+CGG 0.414812 2.2:-4793797 None:intergenic
TGTGCACTTCCACCTGCTCT+TGG 0.426626 2.2:-4797156 None:intergenic
CCAAATTATAACATTCCTAC+TGG 0.428512 2.2:+4794033 MS.gene052074:CDS
CAGGTGGAAGTGCACATTAA+AGG 0.432895 2.2:+4797163 MS.gene052074:CDS
AGAGGAACACTGGAGTTAAC+AGG 0.440705 2.2:+4793759 MS.gene052074:CDS
CGCGATGAGTTTGTCAATAC+CGG 0.445836 2.2:+4793456 MS.gene052074:CDS
ATTAGTGTGTTGTGAATTGA+AGG 0.450304 2.2:-4795899 None:intergenic
GCCCGCAGATTTGGAGAGAC+TGG 0.455534 2.2:+4795936 MS.gene052074:CDS
GTCAATACCGGTGCTGGTCC+TGG 0.455673 2.2:+4793468 MS.gene052074:CDS
TGGAAGACAAGCTCCATTCA+TGG 0.461106 2.2:+4794110 MS.gene052074:CDS
CAAACACCTTTACCTGGACC+TGG 0.464074 2.2:+4794003 MS.gene052074:CDS
TGATGATGATTTGGATGACT+TGG 0.479256 2.2:+4796938 MS.gene052074:CDS
CAGGACTTCTTCACAATGAC+TGG 0.485430 2.2:+4794970 MS.gene052074:intron
GAAAGCACATCATCCTCATA+AGG 0.485824 2.2:-4795991 None:intergenic
TGGAGTTAACAGGCCAATGC+CGG 0.486906 2.2:+4793769 MS.gene052074:CDS
ATTCAAGCTGGTGCAGTGCT+AGG 0.493773 2.2:+4793728 MS.gene052074:CDS
GGCTGCTTCTACCACAAGCC+AGG 0.495166 2.2:+4793395 MS.gene052074:CDS
GAGTTTGTCAATACCGGTGC+TGG 0.495587 2.2:+4793462 MS.gene052074:CDS
GTCTCCCCAGGTCCAGGTAA+AGG 0.497263 2.2:-4794009 None:intergenic
ATATATCCTCCAGCATCATA+TGG 0.501723 2.2:-4795024 None:intergenic
TACTCTTCTGGAAATGATGC+TGG 0.503251 2.2:+4794066 MS.gene052074:CDS
TTCAAGCTACCAGGAGGAGC+TGG 0.507227 2.2:-4796743 None:intergenic
CCGATTCAAACACCTTTACC+TGG 0.513406 2.2:+4793997 MS.gene052074:CDS
GGACGGGATGAGGCAGATAG+AGG 0.514454 2.2:+4794635 MS.gene052074:CDS
GCCAGTCTCTCCAAATCTGC+GGG 0.514751 2.2:-4795937 None:intergenic
CCAGGTAAAGGTGTTTGAAT+CGG 0.515120 2.2:-4793997 None:intergenic
GGAGCTGGTGATGCTATGTC+TGG 0.517406 2.2:+4795060 MS.gene052074:CDS
GTAATCGGACCACCCGGCAT+TGG 0.517485 2.2:-4793782 None:intergenic
ACATCATCCTCATAAGGAAT+CGG 0.517868 2.2:-4795985 None:intergenic
CGATGACATCGATATAAACC+TGG 0.522288 2.2:-4793413 None:intergenic
TTTGGAGTCTCCCCAGGTCC+AGG 0.523372 2.2:-4794015 None:intergenic
GAGTAGTCACTTGGTCCAGT+AGG 0.523425 2.2:-4794048 None:intergenic
ACAAGAGCAGGAGTGCTAGC+TGG 0.532966 2.2:-4796858 None:intergenic
CACAACACACTAATTCAAAA+GGG 0.534356 2.2:+4795908 MS.gene052074:CDS
TCAAAATGAGGCGGTAAATG+AGG 0.539515 2.2:+4796884 MS.gene052074:CDS
GCAAATACACCAGCTCCTCC+TGG 0.541264 2.2:+4796734 MS.gene052074:CDS
TGAGGCGGTAAATGAGGATG+AGG 0.542954 2.2:+4796890 MS.gene052074:CDS
AATACACTTCTGCAGGCGAC+AGG 0.543940 2.2:+4797314 MS.gene052074:intron
TACTCCTCAGTTCCCTCATA+CGG 0.544761 2.2:-4793827 None:intergenic
TTCTAATCAGCCTATGACAC+AGG 0.545412 2.2:+4794661 MS.gene052074:CDS
TGCAGCTTATGTGGAAGGAC+GGG 0.546675 2.2:+4794619 MS.gene052074:intron
TTATAATTTGGAGTCTCCCC+AGG 0.547927 2.2:-4794021 None:intergenic
GGTTGTTACCTTGTCAAACT+GGG 0.548333 2.2:-4797000 None:intergenic
CATCATGCATATAAACAAGA+AGG 0.552004 2.2:+4797190 MS.gene052074:CDS
AGGTGACACGCACCAAGAGC+AGG 0.553192 2.2:+4797144 MS.gene052074:intron
GGAGTTAACAGGCCAATGCC+GGG 0.554860 2.2:+4793770 MS.gene052074:CDS
ATTGCACACTGCAGCTTATG+TGG 0.558004 2.2:+4794610 MS.gene052074:intron
AATTTACGGCTTGAAGCTCT+CGG 0.558169 2.2:-4793503 None:intergenic
CCTCCACTTGATGTCAATGT+TGG 0.562280 2.2:+4794525 MS.gene052074:CDS
TTGCCTCCACCATATGATGC+TGG 0.562588 2.2:+4795015 MS.gene052074:CDS
ATACCTCAGCAAGATGGAGC+TGG 0.563069 2.2:+4795045 MS.gene052074:CDS
GGAAATGCTGATGTCAAAGC+TGG 0.564505 2.2:+4794090 MS.gene052074:CDS
GGATATATACCTCAGCAAGA+TGG 0.565273 2.2:+4795039 MS.gene052074:CDS
CGATGTCATCGAAGATGTCA+TGG 0.569568 2.2:+4793425 MS.gene052074:CDS
TTATGTGGAAGGACGGGATG+AGG 0.571680 2.2:+4794625 MS.gene052074:CDS
TTACCAACATTGACATCAAG+TGG 0.572587 2.2:-4794528 None:intergenic
GTTTGAATCGGAGTTTGCAA+CGG 0.574992 2.2:-4793985 None:intergenic
GGAACATTAAGATCATGAAC+CGG 0.578096 2.2:-4793806 None:intergenic
CTGCAGCTTATGTGGAAGGA+CGG 0.579332 2.2:+4794618 MS.gene052074:intron
GACTTCTTCACAATGACTGG+TGG 0.579685 2.2:+4794973 MS.gene052074:CDS
TTCATCACCAGGACCAGCAC+CGG 0.582603 2.2:-4793475 None:intergenic
AAACACCTTTACCTGGACCT+GGG 0.585553 2.2:+4794004 MS.gene052074:CDS
GATCTTAATGTTCCGTATGA+GGG 0.585955 2.2:+4793815 MS.gene052074:CDS
TTCATATTCATCCAAGGAGA+AGG 0.587542 2.2:-4794495 None:intergenic
GGTCCAATTGAGAGGAACAC+TGG 0.589679 2.2:+4793749 MS.gene052074:CDS
TTGCAGATATACAATTATGG+TGG 0.593778 2.2:+4796686 MS.gene052074:intron
TGCTCTTGTAGCTCAAAATG+AGG 0.597552 2.2:+4796872 MS.gene052074:CDS
GAATCGAAGTGTATTCAAGC+TGG 0.597656 2.2:+4793716 MS.gene052074:CDS
TTTCCAGAAGAGTAGTCACT+TGG 0.600064 2.2:-4794057 None:intergenic
TCTCGGAGGACTTCATCACC+AGG 0.601821 2.2:-4793486 None:intergenic
TTCATCCAAGGAGAAGGAGG+TGG 0.602567 2.2:-4794489 None:intergenic
CCTCCAGCATCATATGGTGG+AGG 0.603099 2.2:-4795018 None:intergenic
CTCTGATTCATATTCATCCA+AGG 0.608051 2.2:-4794501 None:intergenic
AGCCAGTCTCTCCAAATCTG+CGG 0.610071 2.2:-4795938 None:intergenic
CACACTGCAGCTTATGTGGA+AGG 0.612103 2.2:+4794614 MS.gene052074:intron
ACCGGAGTAATCGGACCACC+CGG 0.614149 2.2:-4793788 None:intergenic
CAGTGCTAGGTCCAATTGAG+AGG 0.615366 2.2:+4793741 MS.gene052074:CDS
ATCGATATAAACCTGGCTTG+TGG 0.617594 2.2:-4793406 None:intergenic
TGGAAGTGCACATTAAAGGA+TGG 0.618008 2.2:+4797167 MS.gene052074:CDS
CTTGGATGAATATGAATCAG+AGG 0.618483 2.2:+4794502 MS.gene052074:CDS
GCCGGGTGGTCCGATTACTC+CGG 0.623007 2.2:+4793787 MS.gene052074:CDS
GGAATCGGACCATCAAGTTG+AGG 0.623522 2.2:-4795970 None:intergenic
AACACCTTTACCTGGACCTG+GGG 0.636177 2.2:+4794005 MS.gene052074:CDS
ATATTCATCCAAGGAGAAGG+AGG 0.641539 2.2:-4794492 None:intergenic
TCTTCTGGAAATGATGCTGG+TGG 0.644417 2.2:+4794069 MS.gene052074:CDS
CCTCCACCATATGATGCTGG+AGG 0.647419 2.2:+4795018 MS.gene052074:CDS
TCACAATGACTGGTGGAAAG+CGG 0.647720 2.2:+4794980 MS.gene052074:CDS
TGACACGCACCAAGAGCAGG+TGG 0.657534 2.2:+4797147 MS.gene052074:CDS
GAAGGATATTCTCTTCAACA+AGG 0.659878 2.2:+4797208 MS.gene052074:CDS
TCACCAGCTCCATCTTGCTG+AGG 0.663455 2.2:-4795048 None:intergenic
TATCCTCCAGCATCATATGG+TGG 0.667282 2.2:-4795021 None:intergenic
TTACGGCTTGAAGCTCTCGG+AGG 0.690563 2.2:-4793500 None:intergenic
TCTTGTAGCTCAAAATGAGG+CGG 0.698401 2.2:+4796875 MS.gene052074:CDS
GTTAACAGGCCAATGCCGGG+TGG 0.703646 2.2:+4793773 MS.gene052074:CDS
TGTTCCGTATGAGGGAACTG+AGG 0.717469 2.2:+4793823 MS.gene052074:CDS
CCAACATTGACATCAAGTGG+AGG 0.729595 2.2:-4794525 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATATTTATGTAAGTT+AGG + chr2.2:4795143-4795162 MS.gene052074:intron 10.0%
!!! TATTTATTGTTATTTGTTAA+TGG + chr2.2:4793921-4793940 MS.gene052074:intron 10.0%
!!! TTGAAGAAATTTTTTATTTA+GGG + chr2.2:4793621-4793640 MS.gene052074:intron 10.0%
!!! TTTGAAGAAATTTTTTATTT+AGG + chr2.2:4793620-4793639 MS.gene052074:intron 10.0%
!! ATCTATTTACAAATAACTAA+AGG - chr2.2:4796144-4796163 None:intergenic 15.0%
!!! AAATTTTTTATTTAGGGTTT+TGG + chr2.2:4793627-4793646 MS.gene052074:intron 15.0%
!!! AATTATATTTTGAAGATTTG+TGG + chr2.2:4796779-4796798 MS.gene052074:intron 15.0%
!!! TCAATTTAATGGATTAAAAT+AGG + chr2.2:4796471-4796490 MS.gene052074:intron 15.0%
!! AAAACTACAAGATACAAATT+AGG - chr2.2:4795395-4795414 None:intergenic 20.0%
!! AATTGAAAATTAAGGAGAAA+AGG - chr2.2:4793549-4793568 None:intergenic 20.0%
!! ATAAAAACATAACTCACATT+TGG - chr2.2:4796021-4796040 None:intergenic 20.0%
!! ATTGAAAATTAAGGAGAAAA+GGG - chr2.2:4793548-4793567 None:intergenic 20.0%
!! ATTTACAAATAACTAAAGGT+CGG - chr2.2:4796140-4796159 None:intergenic 20.0%
!! CAGGTTAATGTTTAATAAAA+CGG + chr2.2:4794565-4794584 MS.gene052074:intron 20.0%
!! GAAGTCATTAATAGTTTATT+TGG - chr2.2:4795480-4795499 None:intergenic 20.0%
!! TAACTTCGTAATCAATTTAA+TGG + chr2.2:4796460-4796479 MS.gene052074:intron 20.0%
!! TGAAGAAATTGTGAAATTTA+CGG - chr2.2:4793520-4793539 None:intergenic 20.0%
!! TTATTTGTAAATAGATACGT+CGG + chr2.2:4796148-4796167 MS.gene052074:intron 20.0%
!! TTCAGTTTATTTAATTGTCA+CGG + chr2.2:4797281-4797300 MS.gene052074:intron 20.0%
!!! AGTGTTGATTTATAAAACAA+GGG + chr2.2:4795259-4795278 MS.gene052074:intron 20.0%
!!! GTAGTTTTAAAAAATTGTTG+TGG + chr2.2:4795407-4795426 MS.gene052074:intron 20.0%
!!! TCATATATTTTCTTGACATT+TGG + chr2.2:4796806-4796825 MS.gene052074:intron 20.0%
!!! TTATTTGTTAATGGATGTTT+TGG + chr2.2:4793930-4793949 MS.gene052074:intron 20.0%
!!! TTGATGATTTGTTTAGATTT+GGG + chr2.2:4793694-4793713 MS.gene052074:intron 20.0%
!!! TTTGATGATTTGTTTAGATT+TGG + chr2.2:4793693-4793712 MS.gene052074:intron 20.0%
! AAAATGAACTTTACCATGAA+TGG - chr2.2:4794126-4794145 None:intergenic 25.0%
! AAAGTAACAACTTAGAAAAC+TGG - chr2.2:4796502-4796521 None:intergenic 25.0%
! AAATATTACTGTATCCATCT+TGG - chr2.2:4796531-4796550 None:intergenic 25.0%
! AATAAACATCTGAAGAGATA+TGG - chr2.2:4796292-4796311 None:intergenic 25.0%
! AATACAATGGAAAACATGTT+TGG - chr2.2:4794334-4794353 None:intergenic 25.0%
! AATTGACATTACCACTATTA+CGG - chr2.2:4795195-4795214 None:intergenic 25.0%
! ACTAATAATCCCAGTTTAAA+AGG + chr2.2:4796186-4796205 MS.gene052074:intron 25.0%
! AGCAATATGATATATCTAAC+GGG + chr2.2:4797068-4797087 MS.gene052074:intron 25.0%
! CAATTGAGAAACTAATACAA+TGG - chr2.2:4794347-4794366 None:intergenic 25.0%
! CAGCAATATGATATATCTAA+CGG + chr2.2:4797067-4797086 MS.gene052074:intron 25.0%
! CTAATAATCCCAGTTTAAAA+GGG + chr2.2:4796187-4796206 MS.gene052074:intron 25.0%
! CTTCAGATGTTTATTATTCT+AGG + chr2.2:4796297-4796316 MS.gene052074:intron 25.0%
! TAAAACAATATTGCACGATT+TGG + chr2.2:4794846-4794865 MS.gene052074:intron 25.0%
! TAAACAGTGAAAAAAAGTCA+CGG + chr2.2:4796326-4796345 MS.gene052074:intron 25.0%
! TAAATACCCATTAAATGTGT+TGG - chr2.2:4794799-4794818 None:intergenic 25.0%
! TAACTTCTTTACATAAGTCT+TGG + chr2.2:4796624-4796643 MS.gene052074:intron 25.0%
! TAGATGTTTGAAAAAATTCC+AGG + chr2.2:4794951-4794970 MS.gene052074:intron 25.0%
! TGTAATTAACTGAAAGTGAA+AGG - chr2.2:4797027-4797046 None:intergenic 25.0%
! TGTATGAATCACAAAAATGA+TGG + chr2.2:4794216-4794235 MS.gene052074:intron 25.0%
! TTGAAAATTAAGGAGAAAAG+GGG - chr2.2:4793547-4793566 None:intergenic 25.0%
! TTGTTGCAGATATACAATTA+TGG + chr2.2:4796683-4796702 MS.gene052074:intron 25.0%
! TTTACAAATAACTAAAGGTC+GGG - chr2.2:4796139-4796158 None:intergenic 25.0%
!! ACTGTTGAACATAATCTTTT+AGG + chr2.2:4795858-4795877 MS.gene052074:intron 25.0%
!! GGGGTTAGATAATATATTTT+GGG + chr2.2:4797094-4797113 MS.gene052074:intron 25.0%
!! TATTTATAGAGGGATTTTGT+GGG + chr2.2:4794301-4794320 MS.gene052074:intron 25.0%
!! TTATTTATAGAGGGATTTTG+TGG + chr2.2:4794300-4794319 MS.gene052074:intron 25.0%
!!! AACATAATCTTTTAGGTATG+TGG + chr2.2:4795865-4795884 MS.gene052074:intron 25.0%
!!! AATGAGAGTGTTATTTATAG+AGG + chr2.2:4794290-4794309 MS.gene052074:intron 25.0%
!!! AGATACAAATCATCTAGTTT+TGG + chr2.2:4796977-4796996 MS.gene052074:CDS 25.0%
!!! AGTTCATTTGGTTTTAGAAA+AGG - chr2.2:4795572-4795591 None:intergenic 25.0%
!!! ATGAGAGTGTTATTTATAGA+GGG + chr2.2:4794291-4794310 MS.gene052074:intron 25.0%
!!! ATGTTTTGGATTGTTGATAT+GGG + chr2.2:4793944-4793963 MS.gene052074:intron 25.0%
!!! GAGTGTTGATTTATAAAACA+AGG + chr2.2:4795258-4795277 MS.gene052074:intron 25.0%
!!! GATCTGATTAGTTTTGTTTA+GGG + chr2.2:4793649-4793668 MS.gene052074:intron 25.0%
!!! GTGTTGATTTATAAAACAAG+GGG + chr2.2:4795260-4795279 MS.gene052074:intron 25.0%
AATTAACTGAAAGTGAAAGG+AGG - chr2.2:4797024-4797043 None:intergenic 30.0%
AGATACAAATTAGGTAGAGA+TGG - chr2.2:4795386-4795405 None:intergenic 30.0%
ATGAATCACAAAAATGATGG+TGG + chr2.2:4794219-4794238 MS.gene052074:intron 30.0%
ATTAGTGTGTTGTGAATTGA+AGG - chr2.2:4795902-4795921 None:intergenic 30.0%
ATTTGATGAGACCTTATTGT+TGG + chr2.2:4794733-4794752 MS.gene052074:intron 30.0%
CAACAGAAAACAAACATTGA+TGG - chr2.2:4795230-4795249 None:intergenic 30.0%
CACAACACACTAATTCAAAA+GGG + chr2.2:4795908-4795927 MS.gene052074:CDS 30.0%
CATCATGCATATAAACAAGA+AGG + chr2.2:4797190-4797209 MS.gene052074:CDS 30.0%
CATGCTATATGTTTATCATG+AGG + chr2.2:4794180-4794199 MS.gene052074:intron 30.0%
CCAAATTATAACATTCCTAC+TGG + chr2.2:4794033-4794052 MS.gene052074:CDS 30.0%
CCAGTAGGAATGTTATAATT+TGG - chr2.2:4794036-4794055 None:intergenic 30.0%
CTATATGTTTATCATGAGGT+TGG + chr2.2:4794184-4794203 MS.gene052074:intron 30.0%
CTCATGATAAACATATAGCA+TGG - chr2.2:4794182-4794201 None:intergenic 30.0%
CTTGTTCCAACACATTTAAT+GGG + chr2.2:4794790-4794809 MS.gene052074:intron 30.0%
GAATAAAACAAAACCCTGTA+AGG - chr2.2:4796659-4796678 None:intergenic 30.0%
TAAATGTGTTGGAACAAGAA+AGG - chr2.2:4794788-4794807 None:intergenic 30.0%
TCACAACACACTAATTCAAA+AGG + chr2.2:4795907-4795926 MS.gene052074:CDS 30.0%
TCATCATCATCTTCATTTAG+TGG - chr2.2:4796924-4796943 None:intergenic 30.0%
TCCCAAAATAATTCTGAGTA+GGG - chr2.2:4796103-4796122 None:intergenic 30.0%
TCTTAAAAGCAGTGAACAAT+AGG - chr2.2:4794714-4794733 None:intergenic 30.0%
TCTTGTTCCAACACATTTAA+TGG + chr2.2:4794789-4794808 MS.gene052074:intron 30.0%
TTCCCAAAATAATTCTGAGT+AGG - chr2.2:4796104-4796123 None:intergenic 30.0%
TTGCAGATATACAATTATGG+TGG + chr2.2:4796686-4796705 MS.gene052074:intron 30.0%
TTGTATCTTGATCATCTTCT+TGG - chr2.2:4796965-4796984 None:intergenic 30.0%
TTTGATGAGACCTTATTGTT+GGG + chr2.2:4794734-4794753 MS.gene052074:intron 30.0%
! AAACGGATTTACAATAACGA+TGG + chr2.2:4794582-4794601 MS.gene052074:intron 30.0%
! ATATGATATATCTAACGGGT+AGG + chr2.2:4797072-4797091 MS.gene052074:intron 30.0%
! ATTTATAGAGGGATTTTGTG+GGG + chr2.2:4794302-4794321 MS.gene052074:intron 30.0%
! GGGGGTTAGATAATATATTT+TGG + chr2.2:4797093-4797112 MS.gene052074:intron 30.0%
! TATGATATATCTAACGGGTA+GGG + chr2.2:4797073-4797092 MS.gene052074:intron 30.0%
! TCCCTACTCAGAATTATTTT+GGG + chr2.2:4796099-4796118 MS.gene052074:intron 30.0%
! TCTAAAACCAAATGAACTCT+TGG + chr2.2:4795574-4795593 MS.gene052074:intron 30.0%
! TGAAGATGATGATGATGATT+TGG + chr2.2:4796929-4796948 MS.gene052074:CDS 30.0%
! TGTGCAATTGATTTAAGCTT+TGG + chr2.2:4794379-4794398 MS.gene052074:intron 30.0%
! TTCCCTACTCAGAATTATTT+TGG + chr2.2:4796098-4796117 MS.gene052074:intron 30.0%
!! AAACTAACAATGTTGGTTCT+AGG + chr2.2:4795668-4795687 MS.gene052074:intron 30.0%
!! AACTAACAATGTTGGTTCTA+GGG + chr2.2:4795669-4795688 MS.gene052074:intron 30.0%
!! AATTCATTGACTTGCTCAAT+TGG + chr2.2:4795810-4795829 MS.gene052074:intron 30.0%
!! ATAATCTTTTAGGTATGTGG+AGG + chr2.2:4795868-4795887 MS.gene052074:intron 30.0%
!! GATGTTTTGGATTGTTGATA+TGG + chr2.2:4793943-4793962 MS.gene052074:intron 30.0%
!! TAATCTTTTAGGTATGTGGA+GGG + chr2.2:4795869-4795888 MS.gene052074:intron 30.0%
!! TGTTTGTTTTCTGTTGTAAG+TGG + chr2.2:4795234-4795253 MS.gene052074:intron 30.0%
!!! AGTTTTTGAGATATCAAAGC+AGG - chr2.2:4796567-4796586 None:intergenic 30.0%
!!! GGATCTGATTAGTTTTGTTT+AGG + chr2.2:4793648-4793667 MS.gene052074:intron 30.0%
!!! GTTACTTTTTGAATCCAAGA+TGG + chr2.2:4796514-4796533 MS.gene052074:intron 30.0%
!!! TATTTTGGGACTAATAGAGT+TGG + chr2.2:4797108-4797127 MS.gene052074:intron 30.0%
AAAAAGATGGGGAAAAAGTG+AGG + chr2.2:4794249-4794268 MS.gene052074:intron 35.0%
AAAGGTTCTCCCTTTCATTA+TGG - chr2.2:4795554-4795573 None:intergenic 35.0%
ACACTCACACCATAATGAAA+GGG + chr2.2:4795542-4795561 MS.gene052074:intron 35.0%
ACAGGTAAACAAGTTGTTGA+GGG + chr2.2:4794679-4794698 MS.gene052074:intron 35.0%
ACATCATCCTCATAAGGAAT+CGG - chr2.2:4795988-4796007 None:intergenic 35.0%
ATATATCCTCCAGCATCATA+TGG - chr2.2:4795027-4795046 None:intergenic 35.0%
ATGATACAATACACTTCTGC+AGG + chr2.2:4797307-4797326 MS.gene052074:intron 35.0%
ATGATGAACCAAGAAAGAAG+AGG - chr2.2:4796400-4796419 None:intergenic 35.0%
ATGCCCATTCAATCAATTCA+GGG - chr2.2:4796605-4796624 None:intergenic 35.0%
CATAAAACAGCCCAACAATA+AGG - chr2.2:4794747-4794766 None:intergenic 35.0%
CTCTGATTCATATTCATCCA+AGG - chr2.2:4794504-4794523 None:intergenic 35.0%
CTTGGATGAATATGAATCAG+AGG + chr2.2:4794502-4794521 MS.gene052074:CDS 35.0%
GAAGGATATTCTCTTCAACA+AGG + chr2.2:4797208-4797227 MS.gene052074:CDS 35.0%
GATCCCTGAATTGATTGAAT+GGG + chr2.2:4796599-4796618 MS.gene052074:intron 35.0%
GATCTTAATGTTCCGTATGA+GGG + chr2.2:4793815-4793834 MS.gene052074:CDS 35.0%
GGAACATTAAGATCATGAAC+CGG - chr2.2:4793809-4793828 None:intergenic 35.0%
GGGAAAGAAACTAACAATGT+TGG + chr2.2:4795661-4795680 MS.gene052074:intron 35.0%
GGGTTTCATATCACTTTGTT+GGG + chr2.2:4795280-4795299 MS.gene052074:intron 35.0%
TAATTGCAAAAACTCACAGG+AGG - chr2.2:4793881-4793900 None:intergenic 35.0%
TATGCCCATTCAATCAATTC+AGG - chr2.2:4796606-4796625 None:intergenic 35.0%
TCAATCAATTCAGGGATCAA+AGG - chr2.2:4796597-4796616 None:intergenic 35.0%
TCAGCCACTTCAAAACTATA+AGG + chr2.2:4795501-4795520 MS.gene052074:intron 35.0%
TGAACTGACACTCATTCATA+TGG - chr2.2:4796360-4796379 None:intergenic 35.0%
TGATCCCTGAATTGATTGAA+TGG + chr2.2:4796598-4796617 MS.gene052074:intron 35.0%
TGATCTTAATGTTCCGTATG+AGG + chr2.2:4793814-4793833 MS.gene052074:CDS 35.0%
TTACCAACATTGACATCAAG+TGG - chr2.2:4794531-4794550 None:intergenic 35.0%
TTCATATTCATCCAAGGAGA+AGG - chr2.2:4794498-4794517 None:intergenic 35.0%
! AACTTGTTTACCTGTGTCAT+AGG - chr2.2:4794674-4794693 None:intergenic 35.0%
! AATGTTGCTAGTTTCTTTCC+CGG - chr2.2:4795697-4795716 None:intergenic 35.0%
! ATGATATATCTAACGGGTAG+GGG + chr2.2:4797074-4797093 MS.gene052074:intron 35.0%
! ATTGAGAGCCCTTTTAAACT+GGG - chr2.2:4796198-4796217 None:intergenic 35.0%
! CCTGTGAGTTTTTGCAATTA+GGG + chr2.2:4793881-4793900 MS.gene052074:intron 35.0%
! TATTGAGAGCCCTTTTAAAC+TGG - chr2.2:4796199-4796218 None:intergenic 35.0%
! TCCTGTGAGTTTTTGCAATT+AGG + chr2.2:4793880-4793899 MS.gene052074:intron 35.0%
! TGATGATGATTTGGATGACT+TGG + chr2.2:4796938-4796957 MS.gene052074:CDS 35.0%
! TTTATAGAGGGATTTTGTGG+GGG + chr2.2:4794303-4794322 MS.gene052074:intron 35.0%
!! ACAAGGTTTGTTGATCTTGA+TGG + chr2.2:4797225-4797244 MS.gene052074:intron 35.0%
!! ACTAACAATGTTGGTTCTAG+GGG + chr2.2:4795670-4795689 MS.gene052074:intron 35.0%
!! AGGAAAAAGTATTTCAGCAG+TGG - chr2.2:4793861-4793880 None:intergenic 35.0%
!! GAGTTGGCTTGTTAAACTTT+AGG + chr2.2:4797124-4797143 MS.gene052074:intron 35.0%
!! GGAAAAAGTATTTCAGCAGT+GGG - chr2.2:4793860-4793879 None:intergenic 35.0%
!!! TGAGCCTTATAGTTTTGAAG+TGG - chr2.2:4795508-4795527 None:intergenic 35.0%
AACAAAACCCTGTAAGGTGT+TGG - chr2.2:4796653-4796672 None:intergenic 40.0%
AAGCTGTCCAAGAGTTCATT+TGG - chr2.2:4795584-4795603 None:intergenic 40.0%
AATTTACGGCTTGAAGCTCT+CGG - chr2.2:4793506-4793525 None:intergenic 40.0%
AGATCATGAACCGGAGTAAT+CGG - chr2.2:4793800-4793819 None:intergenic 40.0%
AGGAAAGAAGCTAACACCAA+TGG - chr2.2:4795721-4795740 None:intergenic 40.0%
AGGTTGTTACCTTGTCAAAC+TGG - chr2.2:4797004-4797023 None:intergenic 40.0%
ATATTCATCCAAGGAGAAGG+AGG - chr2.2:4794495-4794514 None:intergenic 40.0%
ATGATGTACAACAGTGAGCT+AGG - chr2.2:4795741-4795760 None:intergenic 40.0%
CACACTCACACCATAATGAA+AGG + chr2.2:4795541-4795560 MS.gene052074:intron 40.0%
CACAGGTAAACAAGTTGTTG+AGG + chr2.2:4794678-4794697 MS.gene052074:intron 40.0%
CCCTAATTGCAAAAACTCAC+AGG - chr2.2:4793884-4793903 None:intergenic 40.0%
CGATGACATCGATATAAACC+TGG - chr2.2:4793416-4793435 None:intergenic 40.0%
GAAAAAGTGAGGAGGTGATT+TGG + chr2.2:4794260-4794279 MS.gene052074:intron 40.0%
GAAACTAGCAACATTGCCAT+TGG + chr2.2:4795702-4795721 MS.gene052074:intron 40.0%
GAATACTGCCTCTTCTTTCT+TGG + chr2.2:4796389-4796408 MS.gene052074:intron 40.0%
GAATCGAAGTGTATTCAAGC+TGG + chr2.2:4793716-4793735 MS.gene052074:CDS 40.0%
GAATGAGTGTCAGTTCAGTT+TGG + chr2.2:4796363-4796382 MS.gene052074:intron 40.0%
GGATATATACCTCAGCAAGA+TGG + chr2.2:4795039-4795058 MS.gene052074:CDS 40.0%
GGGGTTTCATATCACTTTGT+TGG + chr2.2:4795279-4795298 MS.gene052074:intron 40.0%
GGTGGCATGAGAAAAAAGAT+GGG + chr2.2:4794237-4794256 MS.gene052074:intron 40.0%
GGTTGTTACCTTGTCAAACT+GGG - chr2.2:4797003-4797022 None:intergenic 40.0%
GTGGCATGAGAAAAAAGATG+GGG + chr2.2:4794238-4794257 MS.gene052074:intron 40.0%
GTTTGAATCGGAGTTTGCAA+CGG - chr2.2:4793988-4794007 None:intergenic 40.0%
TATCATATTGCTGTAGCGCT+TGG - chr2.2:4797060-4797079 None:intergenic 40.0%
TCAAAATGAGGCGGTAAATG+AGG + chr2.2:4796884-4796903 MS.gene052074:CDS 40.0%
TCTTGTAGCTCAAAATGAGG+CGG + chr2.2:4796875-4796894 MS.gene052074:CDS 40.0%
TGCTCTTGTAGCTCAAAATG+AGG + chr2.2:4796872-4796891 MS.gene052074:CDS 40.0%
TGGCATTCTACACTACAAGA+GGG + chr2.2:4795634-4795653 MS.gene052074:intron 40.0%
TGGTGGCATGAGAAAAAAGA+TGG + chr2.2:4794236-4794255 MS.gene052074:intron 40.0%
TTCTAATCAGCCTATGACAC+AGG + chr2.2:4794661-4794680 MS.gene052074:CDS 40.0%
TTGGATTCCAACACCTTACA+GGG + chr2.2:4796643-4796662 MS.gene052074:intron 40.0%
TTGGCATTCTACACTACAAG+AGG + chr2.2:4795633-4795652 MS.gene052074:intron 40.0%
TTTCCAGAAGAGTAGTCACT+TGG - chr2.2:4794060-4794079 None:intergenic 40.0%
! ACTTCTGTGCACTGTTCTTT+TGG + chr2.2:4795614-4795633 MS.gene052074:intron 40.0%
! ATCGATATAAACCTGGCTTG+TGG - chr2.2:4793409-4793428 None:intergenic 40.0%
! GAAAGCACATCATCCTCATA+AGG - chr2.2:4795994-4796013 None:intergenic 40.0%
! GCAACAAGTTTTCCTTCACA+AGG - chr2.2:4794891-4794910 None:intergenic 40.0%
! TACTCTTCTGGAAATGATGC+TGG + chr2.2:4794066-4794085 MS.gene052074:CDS 40.0%
! TCATTTTGAGCTACAAGAGC+AGG - chr2.2:4796873-4796892 None:intergenic 40.0%
! TCTAGGATTCCTCAACTTGA+TGG + chr2.2:4795961-4795980 MS.gene052074:CDS 40.0%
! TGATATATCTAACGGGTAGG+GGG + chr2.2:4797075-4797094 MS.gene052074:intron 40.0%
! TGGAAGTGCACATTAAAGGA+TGG + chr2.2:4797167-4797186 MS.gene052074:CDS 40.0%
! TTATAATTTGGAGTCTCCCC+AGG - chr2.2:4794024-4794043 None:intergenic 40.0%
!! AAAAGTTTGGTGCTGACCAA+TGG - chr2.2:4795118-4795137 None:intergenic 40.0%
!! AAAGTTTGGTGCTGACCAAT+GGG - chr2.2:4795117-4795136 None:intergenic 40.0%
!! CCAGGTAAAGGTGTTTGAAT+CGG - chr2.2:4794000-4794019 None:intergenic 40.0%
!! CTAACAATGTTGGTTCTAGG+GGG + chr2.2:4795671-4795690 MS.gene052074:intron 40.0%
!! TATCACGTTTTCAAGCTACC+AGG - chr2.2:4796755-4796774 None:intergenic 40.0%
!! TCATTGACTTGCTCAATTGG+TGG + chr2.2:4795813-4795832 MS.gene052074:intron 40.0%
!! TTGCACGATTTGGTCTATCA+TGG + chr2.2:4794856-4794875 MS.gene052074:intron 40.0%
!!! GTCTGGCGATTTTGAAATTG+AGG + chr2.2:4795077-4795096 MS.gene052074:CDS 40.0%
AAACACCTTTACCTGGACCT+GGG + chr2.2:4794004-4794023 MS.gene052074:CDS 45.0%
AAGATGGGGAAAAAGTGAGG+AGG + chr2.2:4794252-4794271 MS.gene052074:intron 45.0%
ACTCCAGTGTTCCTCTCAAT+TGG - chr2.2:4793755-4793774 None:intergenic 45.0%
AGAGGAACACTGGAGTTAAC+AGG + chr2.2:4793759-4793778 MS.gene052074:CDS 45.0%
ATGGTGTGAGTGTGCATCAT+TGG - chr2.2:4795535-4795554 None:intergenic 45.0%
ATTGCACACTGCAGCTTATG+TGG + chr2.2:4794610-4794629 MS.gene052074:intron 45.0%
CAGGACTTCTTCACAATGAC+TGG + chr2.2:4794970-4794989 MS.gene052074:intron 45.0%
CAGTCATTGTGAAGAAGTCC+TGG - chr2.2:4794972-4794991 None:intergenic 45.0%
CCAACATTGACATCAAGTGG+AGG - chr2.2:4794528-4794547 None:intergenic 45.0%
CCGATTCAAACACCTTTACC+TGG + chr2.2:4793997-4794016 MS.gene052074:CDS 45.0%
CCTCCACTTGATGTCAATGT+TGG + chr2.2:4794525-4794544 MS.gene052074:CDS 45.0%
CGATGTCATCGAAGATGTCA+TGG + chr2.2:4793425-4793444 MS.gene052074:CDS 45.0%
CGCGATGAGTTTGTCAATAC+CGG + chr2.2:4793456-4793475 MS.gene052074:CDS 45.0%
CTTGGATTCCAACACCTTAC+AGG + chr2.2:4796642-4796661 MS.gene052074:intron 45.0%
GACTTCTTCACAATGACTGG+TGG + chr2.2:4794973-4794992 MS.gene052074:CDS 45.0%
GCATTCTACACTACAAGAGG+GGG + chr2.2:4795636-4795655 MS.gene052074:intron 45.0%
GGAAATGCTGATGTCAAAGC+TGG + chr2.2:4794090-4794109 MS.gene052074:CDS 45.0%
GGCATTCTACACTACAAGAG+GGG + chr2.2:4795635-4795654 MS.gene052074:intron 45.0%
GGTACTTGCGTATCAATTGC+AGG + chr2.2:4795164-4795183 MS.gene052074:intron 45.0%
TACTCCTCAGTTCCCTCATA+CGG - chr2.2:4793830-4793849 None:intergenic 45.0%
TATCCTCCAGCATCATATGG+TGG - chr2.2:4795024-4795043 None:intergenic 45.0%
TCACAATGACTGGTGGAAAG+CGG + chr2.2:4794980-4794999 MS.gene052074:CDS 45.0%
TGATGGTCCGATTCCTTATG+AGG + chr2.2:4795978-4795997 MS.gene052074:CDS 45.0%
TGCAGGTAGTTCCGTAATAG+TGG + chr2.2:4795181-4795200 MS.gene052074:intron 45.0%
TGGAAGACAAGCTCCATTCA+TGG + chr2.2:4794110-4794129 MS.gene052074:CDS 45.0%
TGGCTAACATCACCTTGTGA+AGG + chr2.2:4794876-4794895 MS.gene052074:intron 45.0%
TGGTGTGAGTGTGCATCATT+GGG - chr2.2:4795534-4795553 None:intergenic 45.0%
! CAGGTGGAAGTGCACATTAA+AGG + chr2.2:4797163-4797182 MS.gene052074:CDS 45.0%
! GCTAGCTGGTACTTCTAAGA+AGG - chr2.2:4796847-4796866 None:intergenic 45.0%
! TCTTCTGGAAATGATGCTGG+TGG + chr2.2:4794069-4794088 MS.gene052074:CDS 45.0%
!! AAGTTTGGTGCTGACCAATG+GGG - chr2.2:4795116-4795135 None:intergenic 45.0%
!! AGTTTTGGCCCAGTTTGACA+AGG + chr2.2:4796992-4797011 MS.gene052074:CDS 45.0%
!! ATTTGGAGAGACTGGCTTCT+AGG + chr2.2:4795944-4795963 MS.gene052074:CDS 45.0%
!! AATTAATTAATTGAAAATTA+AGG - chr2.2:4793557-4793576 None:intergenic 5.0%
!! TATAAATTATTATAAAAGTT+TGG - chr2.2:4795131-4795150 None:intergenic 5.0%
AACACCTTTACCTGGACCTG+GGG + chr2.2:4794005-4794024 MS.gene052074:CDS 50.0%
AATACACTTCTGCAGGCGAC+AGG + chr2.2:4797314-4797333 MS.gene052074:intron 50.0%
AGCCAGTCTCTCCAAATCTG+CGG - chr2.2:4795941-4795960 None:intergenic 50.0%
AGGGAAAATGCCCGCAGATT+TGG + chr2.2:4795927-4795946 MS.gene052074:CDS 50.0%
ATACCTCAGCAAGATGGAGC+TGG + chr2.2:4795045-4795064 MS.gene052074:CDS 50.0%
ATCAAAGCTCAGACGAGCAC+AGG - chr2.2:4796053-4796072 None:intergenic 50.0%
ATTCAAGCTGGTGCAGTGCT+AGG + chr2.2:4793728-4793747 MS.gene052074:CDS 50.0%
CAAACACCTTTACCTGGACC+TGG + chr2.2:4794003-4794022 MS.gene052074:CDS 50.0%
CACACTGCAGCTTATGTGGA+AGG + chr2.2:4794614-4794633 MS.gene052074:intron 50.0%
CAGTGCTAGGTCCAATTGAG+AGG + chr2.2:4793741-4793760 MS.gene052074:CDS 50.0%
CCTAACCCCACAAAAGGACA+GGG - chr2.2:4795317-4795336 None:intergenic 50.0%
CCTTCTCCTAACCCCACAAA+AGG - chr2.2:4795323-4795342 None:intergenic 50.0%
CTAACCCCACAAAAGGACAG+GGG - chr2.2:4795316-4795335 None:intergenic 50.0%
CTACACTACAAGAGGGGGTT+GGG + chr2.2:4795641-4795660 MS.gene052074:intron 50.0%
CTGCAGCTTATGTGGAAGGA+CGG + chr2.2:4794618-4794637 MS.gene052074:intron 50.0%
GAGTAGTCACTTGGTCCAGT+AGG - chr2.2:4794051-4794070 None:intergenic 50.0%
GAGTTTGTCAATACCGGTGC+TGG + chr2.2:4793462-4793481 MS.gene052074:CDS 50.0%
GGACCAAGTGACTACTCTTC+TGG + chr2.2:4794054-4794073 MS.gene052074:CDS 50.0%
GGTAAGTCTCGCACAAGTTC+AGG + chr2.2:4794546-4794565 MS.gene052074:intron 50.0%
GGTCCAATTGAGAGGAACAC+TGG + chr2.2:4793749-4793768 MS.gene052074:CDS 50.0%
GTGTGTCTTTATCCCCCCAT+TGG + chr2.2:4795099-4795118 MS.gene052074:intron 50.0%
TCCTAACCCCACAAAAGGAC+AGG - chr2.2:4795318-4795337 None:intergenic 50.0%
TCTACACTACAAGAGGGGGT+TGG + chr2.2:4795640-4795659 MS.gene052074:intron 50.0%
TGAGGCGGTAAATGAGGATG+AGG + chr2.2:4796890-4796909 MS.gene052074:CDS 50.0%
TGCAGCTTATGTGGAAGGAC+GGG + chr2.2:4794619-4794638 MS.gene052074:intron 50.0%
TGGAGTTAACAGGCCAATGC+CGG + chr2.2:4793769-4793788 MS.gene052074:CDS 50.0%
TGTTCCGTATGAGGGAACTG+AGG + chr2.2:4793823-4793842 MS.gene052074:CDS 50.0%
TTATGTGGAAGGACGGGATG+AGG + chr2.2:4794625-4794644 MS.gene052074:CDS 50.0%
TTCATCCAAGGAGAAGGAGG+TGG - chr2.2:4794492-4794511 None:intergenic 50.0%
TTGCCTCCACCATATGATGC+TGG + chr2.2:4795015-4795034 MS.gene052074:CDS 50.0%
TTGTGGGGTTAGGAGAAGGT+GGG + chr2.2:4795324-4795343 MS.gene052074:intron 50.0%
TTTGTGGGGTTAGGAGAAGG+TGG + chr2.2:4795323-4795342 MS.gene052074:intron 50.0%
! ACATCCCCTGTCCTTTTGTG+GGG + chr2.2:4795309-4795328 MS.gene052074:intron 50.0%
! AGAACAGTGCACAGAAGTGC+TGG - chr2.2:4795612-4795631 None:intergenic 50.0%
! CACATCCCCTGTCCTTTTGT+GGG + chr2.2:4795308-4795327 MS.gene052074:intron 50.0%
! CCTTTTGTGGGGTTAGGAGA+AGG + chr2.2:4795320-4795339 MS.gene052074:intron 50.0%
! GGAATCGGACCATCAAGTTG+AGG - chr2.2:4795973-4795992 None:intergenic 50.0%
! TCACATCCCCTGTCCTTTTG+TGG + chr2.2:4795307-4795326 MS.gene052074:intron 50.0%
!! AGTTTGGTGCTGACCAATGG+GGG - chr2.2:4795115-4795134 None:intergenic 50.0%
!! CACGTTTTCAAGCTACCAGG+AGG - chr2.2:4796752-4796771 None:intergenic 50.0%
!! GAACAGTGCACAGAAGTGCT+GGG - chr2.2:4795611-4795630 None:intergenic 50.0%
CCTCCACCATATGATGCTGG+AGG + chr2.2:4795018-4795037 MS.gene052074:CDS 55.0%
CCTCCAGCATCATATGGTGG+AGG - chr2.2:4795021-4795040 None:intergenic 55.0%
GCAAATACACCAGCTCCTCC+TGG + chr2.2:4796734-4796753 MS.gene052074:CDS 55.0%
GCCAGTCTCTCCAAATCTGC+GGG - chr2.2:4795940-4795959 None:intergenic 55.0%
GGAGTTAACAGGCCAATGCC+GGG + chr2.2:4793770-4793789 MS.gene052074:CDS 55.0%
TCACCAGCTCCATCTTGCTG+AGG - chr2.2:4795051-4795070 None:intergenic 55.0%
TCTCGGAGGACTTCATCACC+AGG - chr2.2:4793489-4793508 None:intergenic 55.0%
TGTGCACTTCCACCTGCTCT+TGG - chr2.2:4797159-4797178 None:intergenic 55.0%
TGTGGGGTTAGGAGAAGGTG+GGG + chr2.2:4795325-4795344 MS.gene052074:intron 55.0%
TTACGGCTTGAAGCTCTCGG+AGG - chr2.2:4793503-4793522 None:intergenic 55.0%
TTCAAGCTACCAGGAGGAGC+TGG - chr2.2:4796746-4796765 None:intergenic 55.0%
TTCATCACCAGGACCAGCAC+CGG - chr2.2:4793478-4793497 None:intergenic 55.0%
! CCCTGTCCTTTTGTGGGGTT+AGG + chr2.2:4795314-4795333 MS.gene052074:intron 55.0%
! GGAGCTGGTGATGCTATGTC+TGG + chr2.2:4795060-4795079 MS.gene052074:CDS 55.0%
!! AATGTTGGTTCTAGGGGGCC+GGG + chr2.2:4795676-4795695 MS.gene052074:intron 55.0%
!! ACAAGAGCAGGAGTGCTAGC+TGG - chr2.2:4796861-4796880 None:intergenic 55.0%
!! CAATGTTGGTTCTAGGGGGC+CGG + chr2.2:4795675-4795694 MS.gene052074:intron 55.0%
!! GTTTGGTGCTGACCAATGGG+GGG - chr2.2:4795114-4795133 None:intergenic 55.0%
AAGCTCAGACGAGCACAGGC+AGG - chr2.2:4796049-4796068 None:intergenic 60.0%
ACCGGAGTAATCGGACCACC+CGG - chr2.2:4793791-4793810 None:intergenic 60.0%
AGGTGACACGCACCAAGAGC+AGG + chr2.2:4797144-4797163 MS.gene052074:intron 60.0%
GCCCGCAGATTTGGAGAGAC+TGG + chr2.2:4795936-4795955 MS.gene052074:CDS 60.0%
GGACGGGATGAGGCAGATAG+AGG + chr2.2:4794635-4794654 MS.gene052074:CDS 60.0%
GGCTGCTTCTACCACAAGCC+AGG + chr2.2:4793395-4793414 MS.gene052074:CDS 60.0%
GTAATCGGACCACCCGGCAT+TGG - chr2.2:4793785-4793804 None:intergenic 60.0%
GTCTCCCCAGGTCCAGGTAA+AGG - chr2.2:4794012-4794031 None:intergenic 60.0%
GTGGGGTTAGGAGAAGGTGG+GGG + chr2.2:4795326-4795345 MS.gene052074:intron 60.0%
GTTAACAGGCCAATGCCGGG+TGG + chr2.2:4793773-4793792 MS.gene052074:CDS 60.0%
TGACACGCACCAAGAGCAGG+TGG + chr2.2:4797147-4797166 MS.gene052074:CDS 60.0%
! TTTGGAGTCTCCCCAGGTCC+AGG - chr2.2:4794018-4794037 None:intergenic 60.0%
!! GTCAATACCGGTGCTGGTCC+TGG + chr2.2:4793468-4793487 MS.gene052074:CDS 60.0%
CCTGCACATTCCACCAGCCC+TGG - chr2.2:4795354-4795373 None:intergenic 65.0%
CGCAGCCACCTCCTTCTCCT+TGG + chr2.2:4794484-4794503 MS.gene052074:intron 65.0%
GCCGGGTGGTCCGATTACTC+CGG + chr2.2:4793787-4793806 MS.gene052074:CDS 65.0%
! CCAGGGCTGGTGGAATGTGC+AGG + chr2.2:4795351-4795370 MS.gene052074:intron 65.0%
!! AGGAGAAGGTGGGGGCACCA+GGG + chr2.2:4795334-4795353 MS.gene052074:intron 65.0%
!! TAGGAGAAGGTGGGGGCACC+AGG + chr2.2:4795333-4795352 MS.gene052074:intron 65.0%
!! GAAGGTGGGGGCACCAGGGC+TGG + chr2.2:4795338-4795357 MS.gene052074:intron 75.0%
!!! GGTGGGGGCACCAGGGCTGG+TGG + chr2.2:4795341-4795360 MS.gene052074:intron 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 4793393 4797352 4793393 ID=MS.gene052074
chr2.2 mRNA 4793393 4797352 4793393 ID=MS.gene052074.t1;Parent=MS.gene052074
chr2.2 exon 4793393 4793518 4793393 ID=MS.gene052074.t1.exon1;Parent=MS.gene052074.t1
chr2.2 CDS 4793393 4793518 4793393 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4793710 4793883 4793710 ID=MS.gene052074.t1.exon2;Parent=MS.gene052074.t1
chr2.2 CDS 4793710 4793883 4793710 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4793982 4794131 4793982 ID=MS.gene052074.t1.exon3;Parent=MS.gene052074.t1
chr2.2 CDS 4793982 4794131 4793982 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4794489 4794546 4794489 ID=MS.gene052074.t1.exon4;Parent=MS.gene052074.t1
chr2.2 CDS 4794489 4794546 4794489 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4794624 4794682 4794624 ID=MS.gene052074.t1.exon5;Parent=MS.gene052074.t1
chr2.2 CDS 4794624 4794682 4794624 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4794973 4795098 4794973 ID=MS.gene052074.t1.exon6;Parent=MS.gene052074.t1
chr2.2 CDS 4794973 4795098 4794973 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4795880 4796023 4795880 ID=MS.gene052074.t1.exon7;Parent=MS.gene052074.t1
chr2.2 CDS 4795880 4796023 4795880 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4796692 4796755 4796692 ID=MS.gene052074.t1.exon8;Parent=MS.gene052074.t1
chr2.2 CDS 4796692 4796755 4796692 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4796853 4797013 4796853 ID=MS.gene052074.t1.exon9;Parent=MS.gene052074.t1
chr2.2 CDS 4796853 4797013 4796853 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4797146 4797229 4797146 ID=MS.gene052074.t1.exon10;Parent=MS.gene052074.t1
chr2.2 CDS 4797146 4797229 4797146 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
chr2.2 exon 4797329 4797352 4797329 ID=MS.gene052074.t1.exon11;Parent=MS.gene052074.t1
chr2.2 CDS 4797329 4797352 4797329 ID=cds.MS.gene052074.t1;Parent=MS.gene052074.t1
Gene Sequence

>MS.gene052074

ATGGCTGCTTCTACCACAAGCCAGGTTTATATCGATGTCATCGAAGATGTCATGGTCAAAGTTCGCGATGAGTTTGTCAATACCGGTGCTGGTCCTGGTGATGAAGTCCTCCGAGAGCTTCAAGCCGTAAATTTCACAATTTCTTCATTTTCCCCTTTTCTCCTTAATTTTCAATTAATTAATTAATAATTAAAGAAATCTTGTTAATTGATATGATTTGATTTAGTTTTGAAGAAATTTTTTATTTAGGGTTTTGGATCTGATTAGTTTTGTTTAGGGATTTAAGATTTGTTTAATGTTTTTGATGATTTGTTTAGATTTGGGAATCGAAGTGTATTCAAGCTGGTGCAGTGCTAGGTCCAATTGAGAGGAACACTGGAGTTAACAGGCCAATGCCGGGTGGTCCGATTACTCCGGTTCATGATCTTAATGTTCCGTATGAGGGAACTGAGGAGTATGAAACTCCCACTGCTGAAATACTTTTTCCTCCTGTGAGTTTTTGCAATTAGGGTTATTATTGAATGTGCTTATTTATTGTTATTTGTTAATGGATGTTTTGGATTGTTGATATGGGTTTTTGAATATATAGACGCCGTTGCAAACTCCGATTCAAACACCTTTACCTGGACCTGGGGAGACTCCAAATTATAACATTCCTACTGGACCAAGTGACTACTCTTCTGGAAATGATGCTGGTGGAAATGCTGATGTCAAAGCTGGAAGACAAGCTCCATTCATGGTAAAGTTCATTTTTTACAGTTTGATGTTTTAAAAATTTTTCATATGCCATGCTATATGTTTATCATGAGGTTGGATCATCTTGTGTATGAATCACAAAAATGATGGTGGCATGAGAAAAAAGATGGGGAAAAAGTGAGGAGGTGATTTGGAGAGAGAAATGAGAGTGTTATTTATAGAGGGATTTTGTGGGGGACGATCCAAACATGTTTTCCATTGTATTAGTTTCTCAATTGATATTCTCAAATTGTGCAATTGATTTAAGCTTTGGCTATTGTACAGTTGTTTCACTCTTCTGTTTAGAACATGTTCTTATTTTTAACGTGTGCATTGACACTGTACTTATAATTCTTCGCAGCCACCTCCTTCTCCTTGGATGAATATGAATCAGAGGCCTCCACTTGATGTCAATGTTGGTAAGTCTCGCACAAGTTCAGGTTAATGTTTAATAAAACGGATTTACAATAACGATGGATTGCATTGCACACTGCAGCTTATGTGGAAGGACGGGATGAGGCAGATAGAGGAGCTTCTAATCAGCCTATGACACAGGTAAACAAGTTGTTGAGGGCTTATGCTACCTATTGTTCACTGCTTTTAAGATTTGATGAGACCTTATTGTTGGGCTGTTTTATGAAGCTAGCAAATATTGCTCCTTTCTTGTTCCAACACATTTAATGGGTATTTAAATGCTGTCATCATTCATGATTTTCAGTAAAACAATATTGCACGATTTGGTCTATCATGGCTAACATCACCTTGTGAAGGAAAACTTGTTGCTTTCGAGTCTGAACTCGAAGTCATGACGTTTAGATATTAATAGATGTTTGAAAAAATTCCAGGACTTCTTCACAATGACTGGTGGAAAGCGGAAGCGCAATGATTTGCCTCCACCATATGATGCTGGAGGATATATACCTCAGCAAGATGGAGCTGGTGATGCTATGTCTGGCGATTTTGAAATTGAGGTGTGTCTTTATCCCCCCATTGGTCAGCACCAAACTTTTATAATAATTTATATTTATGTAAGTTAGGTACTTGCGTATCAATTGCAGGTAGTTCCGTAATAGTGGTAATGTCAATTCTATTATTTATACCATCAATGTTTGTTTTCTGTTGTAAGTGGTGAGTGTTGATTTATAAAACAAGGGGTTTCATATCACTTTGTTGGGTTTATCACATCCCCTGTCCTTTTGTGGGGTTAGGAGAAGGTGGGGGCACCAGGGCTGGTGGAATGTGCAGGCATGTCATGCCATCTCTACCTAATTTGTATCTTGTAGTTTTAAAAAATTGTTGTGGTTAATGCACAAATTCTTTCATATGTGATGCTGTACAGCAACAGTTTTCCAAATAAACTATTAATGACTTCGTCAGCCACTTCAAAACTATAAGGCTCACTTCCCAATGATGCACACTCACACCATAATGAAAGGGAGAACCTTTTCTAAAACCAAATGAACTCTTGGACAGCTTCTTTCCCAGCACTTCTGTGCACTGTTCTTTTGGCATTCTACACTACAAGAGGGGGTTGGGAAAGAAACTAACAATGTTGGTTCTAGGGGGCCGGGAAAGAAACTAGCAACATTGCCATTGGTGTTAGCTTCTTTCCTAGCTCACTGTTGTACATCATTGTGTAGACTTTTTGTAGTACATGCATTGTTTTATTCTGTCTGTTACTTAATTCATTGACTTGCTCAATTGGTGGATACATTTTTTTCATTTACTAAACTGTTGAACATAATCTTTTAGGTATGTGGAGGGAGCATCTCCTTCAATTCACAACACACTAATTCAAAAGGGAAAATGCCCGCAGATTTGGAGAGACTGGCTTCTAGGATTCCTCAACTTGATGGTCCGATTCCTTATGAGGATGATGTGCTTTCTACTCCAAATGTGAGTTATGTTTTTATCTGCTCCTGCCTGTGCTCGTCTGAGCTTTGATAATGAAACAGTTTGCTATTTGTTATTTCCCTACTCAGAATTATTTTGGGAAAGAATGCATGCACCCGACCTTTAGTTATTTGTAAATAGATACGTCGGCTTTGACTTTTGACAACTAATAATCCCAGTTTAAAAGGGCTCTCAATATCAATAGCAACTTAATTTGTATTTAATGTGAATTTGATTATCTTTTGTTGTAAAATATACAAGAAATTGACCATATCTCTTCAGATGTTTATTATTCTAGGAAGTACTAAACAGTGAAAAAAAGTCACGGTTATACTTCCATATGAATGAGTGTCAGTTCAGTTTGGTGTGAATACTGCCTCTTCTTTCTTGGTTCATCATTGAAAACAGAACGACACAACTACATTTCAGACATAATATGTAACTTCGTAATCAATTTAATGGATTAAAATAGGTATTTCCAGTTTTCTAAGTTGTTACTTTTTGAATCCAAGATGGATACAGTAATATTTTATTAAAGACTTACCTGCTTTGATATCTCAAAAACTGAATGCTCCTTTGATCCCTGAATTGATTGAATGGGCATAACTTCTTTACATAAGTCTTGGATTCCAACACCTTACAGGGTTTTGTTTTATTCGATCTTGTTGCAGATATACAATTATGGTGGAGTGTTCAATGAAGACTACAACATTGCAAATACACCAGCTCCTCCTGGTAGCTTGAAAACGTGATATATTAATTATATTTTGAAGATTTGTGGCATATCATATATTTTCTTGACATTTGGCGCTGTTTTCTTTTGCCTTCTTAGAAGTACCAGCTAGCACTCCTGCTCTTGTAGCTCAAAATGAGGCGGTAAATGAGGATGAGGATGATGAGCCACTAAATGAAGATGATGATGATGATTTGGATGACTTGGACCAAGAAGATGATCAAGATACAAATCATCTAGTTTTGGCCCAGTTTGACAAGGTAACAACCTCCTTTCACTTTCAGTTAATTACACGTCAACTTGCCAAGCGCTACAGCAATATGATATATCTAACGGGTAGGGGGTTAGATAATATATTTTGGGACTAATAGAGTTGGCTTGTTAAACTTTAGGTGACACGCACCAAGAGCAGGTGGAAGTGCACATTAAAGGATGGCATCATGCATATAAACAAGAAGGATATTCTCTTCAACAAGGTTTGTTGATCTTGATGGAAAAGAAATTCTGATATTTTCTCATCTTTTCATTTCAGTTTATTTAATTGTCACGGTTAATGATACAATACACTTCTGCAGGCGACAGGAGAGTTTGACTTCTGA
Protein sequence

>MS.gene052074.t1

MAASTTSQVYIDVIEDVMVKVRDEFVNTGAGPGDEVLRELQAIWESKCIQAGAVLGPIERNTGVNRPMPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIQTPLPGPGETPNYNIPTGPSDYSSGNDAGGNADVKAGRQAPFMPPPSPWMNMNQRPPLDVNVAYVEGRDEADRGASNQPMTQDFFTMTGGKRKRNDLPPPYDAGGYIPQQDGAGDAMSGDFEIEVCGGSISFNSQHTNSKGKMPADLERLASRIPQLDGPIPYEDDVLSTPNIYNYGGVFNEDYNIANTPAPPEVPASTPALVAQNEAVNEDEDDEPLNEDDDDDLDDLDQEDDQDTNHLVLAQFDKVTRTKSRWKCTLKDGIMHINKKDILFNKATGEFDF