Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001140.t1 | RHN59262.1 | 86.9 | 289 | 38 | 0 | 15 | 303 | 19 | 307 | 3.70E-135 | 491.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001140.t1 | Q9FJT2 | 31.1 | 286 | 168 | 11 | 29 | 300 | 161 | 431 | 1.0e-13 | 79.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001140.t1 | G7JEP3 | 86.9 | 289 | 38 | 0 | 15 | 303 | 59 | 347 | 2.6e-135 | 491.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene001140 | MS.gene01653 | PPI |
| MS.gene047137 | MS.gene001140 | PPI |
| MS.gene001140 | MS.gene024262 | PPI |
| MS.gene001140 | MS.gene51793 | PPI |
| MS.gene001140 | MS.gene033694 | PPI |
| MS.gene001140 | MS.gene045772 | PPI |
| MS.gene001140 | MS.gene002112 | PPI |
| MS.gene001140 | MS.gene047136 | PPI |
| MS.gene001140 | MS.gene065373 | PPI |
| MS.gene071257 | MS.gene001140 | PPI |
| MS.gene54960 | MS.gene001140 | PPI |
| MS.gene001140 | MS.gene033695 | PPI |
| MS.gene001140 | MS.gene54959 | PPI |
| MS.gene001140 | MS.gene51795 | PPI |
| MS.gene072003 | MS.gene001140 | PPI |
| MS.gene001140 | MS.gene072000 | PPI |
| MS.gene001140 | MS.gene78164 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001140.t1 | MTR_4g024710 | 84.385 | 301 | 43 | 1 | 3 | 303 | 51 | 347 | 9.24e-180 | 499 |
| MS.gene001140.t1 | MTR_4g024745 | 83.696 | 276 | 45 | 0 | 11 | 286 | 9 | 284 | 6.18e-157 | 439 |
| MS.gene001140.t1 | MTR_8g014260 | 74.483 | 290 | 72 | 2 | 15 | 303 | 163 | 451 | 1.36e-146 | 420 |
| MS.gene001140.t1 | MTR_8g445780 | 66.527 | 239 | 78 | 2 | 19 | 257 | 154 | 390 | 1.17e-100 | 301 |
| MS.gene001140.t1 | MTR_8g014210 | 64.655 | 232 | 81 | 1 | 72 | 303 | 1 | 231 | 2.06e-99 | 291 |
| MS.gene001140.t1 | MTR_2g083840 | 45.205 | 292 | 150 | 7 | 19 | 303 | 169 | 457 | 4.26e-65 | 211 |
| MS.gene001140.t1 | MTR_8g077460 | 66.897 | 145 | 48 | 0 | 159 | 303 | 231 | 375 | 3.35e-63 | 204 |
| MS.gene001140.t1 | MTR_8g077460 | 53.846 | 78 | 35 | 1 | 12 | 89 | 153 | 229 | 5.41e-16 | 77.8 |
| MS.gene001140.t1 | MTR_5g092960 | 48.134 | 268 | 120 | 7 | 50 | 302 | 198 | 461 | 2.30e-62 | 204 |
| MS.gene001140.t1 | MTR_8g062270 | 42.525 | 301 | 157 | 7 | 12 | 302 | 159 | 453 | 5.85e-60 | 198 |
| MS.gene001140.t1 | MTR_8g467800 | 41.860 | 301 | 157 | 8 | 17 | 303 | 157 | 453 | 1.83e-59 | 197 |
| MS.gene001140.t1 | MTR_8g058970 | 45.302 | 298 | 147 | 9 | 19 | 303 | 183 | 477 | 3.71e-58 | 194 |
| MS.gene001140.t1 | MTR_8g468810 | 43.333 | 300 | 151 | 11 | 17 | 303 | 170 | 463 | 1.78e-57 | 191 |
| MS.gene001140.t1 | MTR_8g468840 | 44.295 | 298 | 152 | 9 | 12 | 300 | 155 | 447 | 2.92e-55 | 186 |
| MS.gene001140.t1 | MTR_8g014160 | 39.041 | 292 | 117 | 6 | 17 | 303 | 190 | 425 | 1.54e-49 | 170 |
| MS.gene001140.t1 | MTR_4g032730 | 38.170 | 317 | 149 | 9 | 19 | 302 | 164 | 466 | 6.21e-49 | 169 |
| MS.gene001140.t1 | MTR_8g469020 | 39.145 | 304 | 164 | 11 | 17 | 303 | 152 | 451 | 4.66e-47 | 164 |
| MS.gene001140.t1 | MTR_8g468760 | 39.735 | 302 | 135 | 9 | 12 | 302 | 153 | 418 | 1.16e-44 | 157 |
| MS.gene001140.t1 | MTR_8g058965 | 40.000 | 300 | 162 | 9 | 19 | 303 | 160 | 456 | 2.50e-43 | 154 |
| MS.gene001140.t1 | MTR_8g062010 | 37.801 | 291 | 161 | 10 | 19 | 303 | 154 | 430 | 3.52e-43 | 153 |
| MS.gene001140.t1 | MTR_8g070950 | 36.519 | 293 | 163 | 11 | 19 | 303 | 157 | 434 | 8.26e-39 | 142 |
| MS.gene001140.t1 | MTR_8g062080 | 35.621 | 306 | 161 | 13 | 12 | 303 | 162 | 445 | 3.85e-38 | 140 |
| MS.gene001140.t1 | MTR_8g062310 | 36.299 | 281 | 152 | 10 | 29 | 303 | 169 | 428 | 9.95e-38 | 139 |
| MS.gene001140.t1 | MTR_8g014230 | 67.949 | 78 | 25 | 0 | 216 | 293 | 18 | 95 | 9.75e-32 | 114 |
| MS.gene001140.t1 | MTR_5g092960 | 47.159 | 176 | 82 | 4 | 50 | 216 | 198 | 371 | 1.20e-30 | 119 |
| MS.gene001140.t1 | MTR_4g050250 | 38.189 | 254 | 132 | 11 | 17 | 249 | 170 | 419 | 2.61e-29 | 115 |
| MS.gene001140.t1 | MTR_8g468810 | 42.512 | 207 | 107 | 8 | 17 | 216 | 170 | 371 | 3.05e-29 | 115 |
| MS.gene001140.t1 | MTR_2g086020 | 50.435 | 115 | 54 | 3 | 192 | 303 | 201 | 315 | 8.20e-28 | 110 |
| MS.gene001140.t1 | MTR_8g062300 | 30.530 | 321 | 187 | 10 | 5 | 303 | 171 | 477 | 1.81e-27 | 111 |
| MS.gene001140.t1 | MTR_5g084070 | 32.967 | 273 | 161 | 10 | 35 | 296 | 159 | 420 | 1.77e-22 | 97.1 |
| MS.gene001140.t1 | MTR_8g467800 | 41.558 | 154 | 84 | 4 | 17 | 165 | 157 | 309 | 3.39e-19 | 86.7 |
| MS.gene001140.t1 | MTR_8g468810 | 38.509 | 161 | 92 | 4 | 19 | 179 | 172 | 325 | 1.71e-18 | 84.7 |
| MS.gene001140.t1 | MTR_8g468810 | 41.216 | 148 | 82 | 4 | 19 | 165 | 172 | 315 | 1.80e-18 | 84.3 |
| MS.gene001140.t1 | MTR_8g468810 | 40.136 | 147 | 85 | 3 | 19 | 165 | 172 | 315 | 2.08e-18 | 84.7 |
| MS.gene001140.t1 | MTR_5g080710 | 30.153 | 262 | 160 | 10 | 53 | 302 | 203 | 453 | 4.65e-16 | 78.6 |
| MS.gene001140.t1 | MTR_1g038710 | 31.541 | 279 | 165 | 10 | 15 | 271 | 153 | 427 | 5.01e-14 | 72.4 |
| MS.gene001140.t1 | MTR_1g041245 | 28.839 | 267 | 154 | 11 | 57 | 303 | 136 | 386 | 8.40e-14 | 71.6 |
| MS.gene001140.t1 | MTR_7g098510 | 26.814 | 317 | 191 | 15 | 8 | 303 | 95 | 391 | 1.21e-13 | 71.2 |
| MS.gene001140.t1 | MTR_7g056433 | 31.343 | 134 | 80 | 4 | 179 | 303 | 259 | 389 | 1.04e-11 | 65.5 |
| MS.gene001140.t1 | MTR_7g032380 | 31.818 | 110 | 72 | 1 | 197 | 303 | 247 | 356 | 1.47e-11 | 64.7 |
| MS.gene001140.t1 | MTR_7g032370 | 33.636 | 110 | 70 | 1 | 197 | 303 | 243 | 352 | 2.82e-11 | 63.9 |
| MS.gene001140.t1 | MTR_8g467790 | 28.629 | 248 | 133 | 12 | 17 | 258 | 295 | 504 | 3.41e-11 | 63.9 |
| MS.gene001140.t1 | MTR_3g099800 | 45.312 | 64 | 33 | 1 | 233 | 294 | 36 | 99 | 5.02e-11 | 59.3 |
| MS.gene001140.t1 | MTR_3g115430 | 34.862 | 109 | 66 | 3 | 197 | 303 | 20 | 125 | 6.02e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001140.t1 | AT4G26340 | 29.530 | 298 | 184 | 8 | 17 | 303 | 137 | 419 | 1.06e-24 | 103 |
| MS.gene001140.t1 | AT3G26920 | 29.861 | 288 | 174 | 10 | 29 | 302 | 66 | 339 | 8.01e-19 | 85.9 |
| MS.gene001140.t1 | AT3G26920 | 29.861 | 288 | 174 | 10 | 29 | 302 | 66 | 339 | 8.01e-19 | 85.9 |
| MS.gene001140.t1 | AT5G56390 | 28.378 | 296 | 179 | 10 | 23 | 302 | 146 | 424 | 5.89e-18 | 84.0 |
| MS.gene001140.t1 | AT5G56800 | 27.458 | 295 | 180 | 13 | 23 | 302 | 68 | 343 | 1.63e-16 | 79.3 |
| MS.gene001140.t1 | AT3G26920 | 27.113 | 284 | 148 | 7 | 29 | 302 | 66 | 300 | 5.22e-15 | 74.3 |
| MS.gene001140.t1 | AT5G56325 | 29.259 | 270 | 158 | 11 | 51 | 303 | 11 | 264 | 2.80e-14 | 72.0 |
| MS.gene001140.t1 | AT5G56420 | 27.551 | 294 | 180 | 14 | 25 | 303 | 147 | 422 | 7.28e-14 | 72.0 |
| MS.gene001140.t1 | AT5G56420 | 27.551 | 294 | 180 | 14 | 25 | 303 | 147 | 422 | 7.28e-14 | 72.0 |
| MS.gene001140.t1 | AT5G56420 | 27.551 | 294 | 180 | 14 | 25 | 303 | 147 | 422 | 7.28e-14 | 72.0 |
| MS.gene001140.t1 | AT2G04230 | 28.391 | 317 | 177 | 15 | 15 | 303 | 152 | 446 | 1.04e-13 | 71.6 |
| MS.gene001140.t1 | AT1G32375 | 25.430 | 291 | 195 | 7 | 23 | 303 | 144 | 422 | 1.65e-13 | 70.9 |
| MS.gene001140.t1 | AT1G32375 | 25.430 | 291 | 195 | 7 | 23 | 303 | 144 | 422 | 1.65e-13 | 70.9 |
| MS.gene001140.t1 | AT3G52690 | 28.041 | 296 | 175 | 13 | 27 | 302 | 20 | 297 | 2.91e-13 | 69.3 |
| MS.gene001140.t1 | AT5G38570 | 26.415 | 265 | 175 | 8 | 44 | 302 | 125 | 375 | 4.80e-13 | 69.3 |
| MS.gene001140.t1 | AT3G54910 | 28.470 | 281 | 176 | 7 | 31 | 303 | 110 | 373 | 5.71e-13 | 68.9 |
| MS.gene001140.t1 | AT3G54910 | 28.470 | 281 | 176 | 7 | 31 | 303 | 110 | 373 | 5.71e-13 | 68.9 |
| MS.gene001140.t1 | AT3G54910 | 28.470 | 281 | 176 | 7 | 31 | 303 | 110 | 373 | 5.71e-13 | 68.9 |
| MS.gene001140.t1 | AT5G56820 | 29.392 | 296 | 158 | 12 | 29 | 300 | 155 | 423 | 8.89e-13 | 68.6 |
| MS.gene001140.t1 | AT3G49030 | 29.545 | 308 | 177 | 16 | 14 | 302 | 154 | 440 | 9.38e-13 | 68.6 |
| MS.gene001140.t1 | AT3G52680 | 27.397 | 292 | 176 | 12 | 31 | 302 | 169 | 444 | 2.93e-12 | 67.4 |
| MS.gene001140.t1 | AT4G26350 | 25.763 | 295 | 188 | 9 | 28 | 303 | 146 | 428 | 3.67e-12 | 67.0 |
| MS.gene001140.t1 | AT3G26930 | 28.667 | 300 | 175 | 12 | 29 | 303 | 158 | 443 | 9.35e-12 | 65.9 |
| MS.gene001140.t1 | AT5G56810 | 31.119 | 286 | 168 | 11 | 29 | 300 | 161 | 431 | 1.09e-11 | 65.5 |
| MS.gene001140.t1 | AT3G26930 | 28.667 | 300 | 175 | 12 | 29 | 303 | 113 | 398 | 1.10e-11 | 65.5 |
| MS.gene001140.t1 | AT2G26860 | 30.515 | 272 | 143 | 11 | 28 | 275 | 151 | 400 | 4.18e-11 | 63.5 |
| MS.gene001140.t1 | AT2G26860 | 30.515 | 272 | 143 | 11 | 28 | 275 | 151 | 400 | 4.18e-11 | 63.5 |
| MS.gene001140.t1 | AT5G56560 | 25.517 | 290 | 185 | 11 | 28 | 303 | 335 | 607 | 6.00e-11 | 63.5 |
| MS.gene001140.t1 | AT3G49030 | 26.224 | 286 | 161 | 12 | 29 | 302 | 167 | 414 | 9.27e-11 | 62.8 |
Find 0 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAGATATACATATA+GGG | - | 32781:152889-152908 | MS.gene001140:intron | 10.0% |
| !! | TATATATATATATGTATATG+GGG | + | 32781:152658-152639 | None:intergenic | 10.0% |
| !! | ATATATAGATATACATATAG+GGG | - | 32781:152890-152909 | MS.gene001140:intron | 15.0% |
| !! | GTATATATAGATATACATAT+AGG | - | 32781:152888-152907 | MS.gene001140:intron | 15.0% |
| !! | TATGTATATATAGATAGATA+TGG | - | 32781:153234-153253 | MS.gene001140:CDS | 15.0% |
| !!! | ATGTTATTTCATCATTTATA+TGG | - | 32781:152409-152428 | MS.gene001140:intron | 15.0% |
| !! | AAATCCTTCAAATTGAATAA+AGG | + | 32781:153701-153720 | None:intergenic | 20.0% |
| !! | TAATCGTGTTATATATTAAG+TGG | + | 32781:153560-153579 | None:intergenic | 20.0% |
| !! | TCTTAAAATCCAAAATGATA+AGG | - | 32781:153426-153445 | MS.gene001140:CDS | 20.0% |
| !!! | ATTTTAAGAACTTGAAGAAT+AGG | + | 32781:153415-153434 | None:intergenic | 20.0% |
| !!! | TTAAACAAACCTTATCATTT+TGG | + | 32781:153438-153457 | None:intergenic | 20.0% |
| ! | AAATTGAATAAAGGTAAGGT+GGG | + | 32781:153692-153711 | None:intergenic | 25.0% |
| ! | AATCTTGAATTTGTAGATCA+CGG | + | 32781:153315-153334 | None:intergenic | 25.0% |
| ! | ACTAAAATAAAACCTAACCT+TGG | + | 32781:152383-152402 | None:intergenic | 25.0% |
| ! | AGAAGAAGATAATTGTTGAA+TGG | - | 32781:151613-151632 | MS.gene001140:CDS | 25.0% |
| ! | ATGTAAAGATACTCAAGATA+TGG | + | 32781:152196-152215 | None:intergenic | 25.0% |
| ! | CTTACCTTTATTCAATTTGA+AGG | - | 32781:153694-153713 | MS.gene001140:intron | 25.0% |
| ! | CTTCAAATTGAATAAAGGTA+AGG | + | 32781:153696-153715 | None:intergenic | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | + | 32781:152988-153007 | None:intergenic | 25.0% |
| ! | GGGATCTATTTCATAAAAAT+TGG | + | 32781:153503-153522 | None:intergenic | 25.0% |
| ! | TAACTTATTAACCAATAGCT+TGG | - | 32781:152084-152103 | MS.gene001140:intron | 25.0% |
| !! | AAGATGCTACTTCTAATTTA+TGG | + | 32781:153524-153543 | None:intergenic | 25.0% |
| !! | AGATGCTACTTCTAATTTAT+GGG | + | 32781:153523-153542 | None:intergenic | 25.0% |
| ACCTTCTAACAATAACAAGT+GGG | + | 32781:152930-152949 | None:intergenic | 30.0% | |
| ACGTTGAAATCATATGACAA+AGG | + | 32781:152295-152314 | None:intergenic | 30.0% | |
| ATCTTGAATTTGTAGATCAC+GGG | + | 32781:153314-153333 | None:intergenic | 30.0% | |
| ATTCAATTTGAAGGATTTCG+AGG | - | 32781:153703-153722 | MS.gene001140:intron | 30.0% | |
| ATTTAGATCTCATTCTTCCA+TGG | - | 32781:153350-153369 | MS.gene001140:CDS | 30.0% | |
| CAAATTGAATAAAGGTAAGG+TGG | + | 32781:153693-153712 | None:intergenic | 30.0% | |
| GAATTCTTACTCTTGAGATT+TGG | + | 32781:151527-151546 | None:intergenic | 30.0% | |
| GATTATTGCTGATATTTCCT+TGG | - | 32781:153789-153808 | MS.gene001140:intron | 30.0% | |
| TTATAGCAACATACACCTTA+GGG | - | 32781:152953-152972 | MS.gene001140:intron | 30.0% | |
| ! | GTTGAGTATGTTTTGCAAAA+AGG | - | 32781:153748-153767 | MS.gene001140:intron | 30.0% |
| AAGTGGTTAAATACACCCTA+AGG | + | 32781:152971-152990 | None:intergenic | 35.0% | |
| AATTGACATCTGCGAATATG+TGG | - | 32781:152003-152022 | MS.gene001140:CDS | 35.0% | |
| ACAGCACAGCATTAACATAT+TGG | + | 32781:151819-151838 | None:intergenic | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | - | 32781:153014-153033 | MS.gene001140:CDS | 35.0% | |
| ATTAGCAGTATCTTCAGTGA+TGG | + | 32781:151986-152005 | None:intergenic | 35.0% | |
| CACCTTCTAACAATAACAAG+TGG | + | 32781:152931-152950 | None:intergenic | 35.0% | |
| GAAAATCGAAATAGAGAGTG+AGG | - | 32781:152141-152160 | MS.gene001140:intron | 35.0% | |
| GAATGTCGTACTTCTTATCT+TGG | + | 32781:153816-153835 | None:intergenic | 35.0% | |
| GAATTGCATTACGAATACTG+TGG | + | 32781:151928-151947 | None:intergenic | 35.0% | |
| GTTATAGCAACATACACCTT+AGG | - | 32781:152952-152971 | MS.gene001140:intron | 35.0% | |
| TCTTGAATTTGTAGATCACG+GGG | + | 32781:153313-153332 | None:intergenic | 35.0% | |
| TTACTATTCGACAATGTGAG+CGG | - | 32781:153268-153287 | MS.gene001140:CDS | 35.0% | |
| TTTGAGTGTTTCAACAACCA+AGG | - | 32781:152363-152382 | MS.gene001140:intron | 35.0% | |
| ! | AAACATCGCTGAATGTGTTT+TGG | + | 32781:152222-152241 | None:intergenic | 35.0% |
| ! | CGTGTCAATTGATGACATAT+TGG | + | 32781:151697-151716 | None:intergenic | 35.0% |
| ! | GATTGAAGGCATATACACTT+CGG | + | 32781:151851-151870 | None:intergenic | 35.0% |
| ! | GCACTGATACATAAGATTGA+AGG | + | 32781:151865-151884 | None:intergenic | 35.0% |
| ! | TTCGATTTTCAGCCTTTTCA+AGG | + | 32781:152131-152150 | None:intergenic | 35.0% |
| !! | AACAGTCACCAATTTTAGGA+TGG | - | 32781:153632-153651 | MS.gene001140:intron | 35.0% |
| !! | ACCCACTTGTTATTGTTAGA+AGG | - | 32781:152926-152945 | MS.gene001140:intron | 35.0% |
| !! | ATTTTCAGCCTTTTCAAGGT+AGG | + | 32781:152127-152146 | None:intergenic | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | 32781:153020-153039 | None:intergenic | 35.0% |
| !!! | ACAGTCACCAATTTTAGGAT+GGG | - | 32781:153633-153652 | MS.gene001140:intron | 35.0% |
| !!! | GACACGCTAAATCACTTTTT+TGG | - | 32781:151711-151730 | MS.gene001140:CDS | 35.0% |
| AATCGAAATAGAGAGTGAGG+AGG | - | 32781:152144-152163 | MS.gene001140:intron | 40.0% | |
| AGAGAGTTGGAGTTAAACCA+TGG | + | 32781:153370-153389 | None:intergenic | 40.0% | |
| ATGGTGAATGCACTTCTATG+TGG | - | 32781:152034-152053 | MS.gene001140:CDS | 40.0% | |
| ATTGTCGAACACCAATGTCT+CGG | - | 32781:151668-151687 | MS.gene001140:CDS | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | - | 32781:153013-153032 | MS.gene001140:CDS | 40.0% | |
| GCAAACATTGTCCAAGCTAT+TGG | + | 32781:152098-152117 | None:intergenic | 40.0% | |
| GTACTTCTTATCTTGGTCCA+AGG | + | 32781:153809-153828 | None:intergenic | 40.0% | |
| GTGTTTCAACAACCAAGGTT+AGG | - | 32781:152368-152387 | MS.gene001140:intron | 40.0% | |
| TGTAAGTCGACACATTTCTG+AGG | + | 32781:153866-153885 | None:intergenic | 40.0% | |
| TGTGGATCCCATCCTAAAAT+TGG | + | 32781:153643-153662 | None:intergenic | 40.0% | |
| TGTTGAGGAGCTTGAGTAAT+GGG | + | 32781:152318-152337 | None:intergenic | 40.0% | |
| ! | AAATTGGTGACTGTTCCTGT+AGG | + | 32781:153627-153646 | None:intergenic | 40.0% |
| ! | CAGGAACAGTCACCAATTTT+AGG | - | 32781:153628-153647 | MS.gene001140:intron | 40.0% |
| ! | CATAGAAGTGCATTCACCAT+AGG | + | 32781:152034-152053 | None:intergenic | 40.0% |
| !! | AAGTATTATCAGTGTCGACC+AGG | + | 32781:151769-151788 | None:intergenic | 40.0% |
| !! | AGTATTATCAGTGTCGACCA+GGG | + | 32781:151768-151787 | None:intergenic | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | 32781:153021-153040 | None:intergenic | 40.0% |
| AAATAGAGAGTGAGGAGGTC+GGG | - | 32781:152149-152168 | MS.gene001140:intron | 45.0% | |
| AGATCCAGAGCTTCGATGTT+TGG | + | 32781:152064-152083 | None:intergenic | 45.0% | |
| AGGTGGGATACGAGACAATT+AGG | + | 32781:153676-153695 | None:intergenic | 45.0% | |
| CATATTGGACACCGAGACAT+TGG | + | 32781:151682-151701 | None:intergenic | 45.0% | |
| CTGTTCCTGTAGGCAACAAA+AGG | + | 32781:153617-153636 | None:intergenic | 45.0% | |
| GAAATAGAGAGTGAGGAGGT+CGG | - | 32781:152148-152167 | MS.gene001140:intron | 45.0% | |
| GACATTTGTGAAGCAAGCTG+AGG | + | 32781:153393-153412 | None:intergenic | 45.0% | |
| GATCCAGAGCTTCGATGTTT+GGG | + | 32781:152063-152082 | None:intergenic | 45.0% | |
| GGCGCATTTATTTCAAGCGA+AGG | + | 32781:152175-152194 | None:intergenic | 45.0% | |
| GTGTTGAGGAGCTTGAGTAA+TGG | + | 32781:152319-152338 | None:intergenic | 45.0% | |
| ! | CAAGTCCTTTTGTTGCCTAC+AGG | - | 32781:153609-153628 | MS.gene001140:intron | 45.0% |
| ! | GTTAATGCTGTGCTGTTGTC+TGG | - | 32781:151823-151842 | MS.gene001140:intron | 45.0% |
| !! | ACGAGACAATTAGGAGCACT+AGG | + | 32781:153667-153686 | None:intergenic | 45.0% |
| !! | CAATTAGGAGCACTAGGTTG+TGG | + | 32781:153661-153680 | None:intergenic | 45.0% |
| !! | CGAATATGTGGAAGTGCCTA+TGG | - | 32781:152015-152034 | MS.gene001140:CDS | 45.0% |
| !! | GACACATTTCTGAGGCTCTT+GGG | + | 32781:153858-153877 | None:intergenic | 45.0% |
| !! | TTCAGCCTTTTCAAGGTAGG+TGG | + | 32781:152124-152143 | None:intergenic | 45.0% |
| !! | ATATATATATATATGTATAT+GGG | + | 32781:152477-152458 | None:intergenic | 5.0% |
| !! | TATATATATATATATGTATA+TGG | + | 32781:152476-152457 | None:intergenic | 5.0% |
| AAGCAAGCTGAGGAGAGAGT+TGG | + | 32781:153383-153402 | None:intergenic | 50.0% | |
| AAGCTCCTCAACACTCTCTC+TGG | - | 32781:152325-152344 | MS.gene001140:intron | 50.0% | |
| AGAAACACTTGCACACACCC+TGG | - | 32781:151748-151767 | MS.gene001140:intron | 50.0% | |
| AGCTCCTCAACACTCTCTCT+GGG | - | 32781:152326-152345 | MS.gene001140:intron | 50.0% | |
| GCCTTCCACCTACCTTGAAA+AGG | - | 32781:152116-152135 | MS.gene001140:intron | 50.0% | |
| !! | CGACACATTTCTGAGGCTCT+TGG | + | 32781:153859-153878 | None:intergenic | 50.0% |
| !! | GCCTTTTCAAGGTAGGTGGA+AGG | + | 32781:152120-152139 | None:intergenic | 50.0% |
| !! | TTGTCCCAGAGAGAGTGTTG+AGG | + | 32781:152333-152352 | None:intergenic | 50.0% |
| CTGCCCAAACATCGAAGCTC+TGG | - | 32781:152057-152076 | MS.gene001140:CDS | 55.0% | |
| TCGACAATGTGAGCGGACAG+TGG | - | 32781:153275-153294 | MS.gene001140:CDS | 55.0% | |
| GTGAGCGGACAGTGGCTGCT+TGG | - | 32781:153283-153302 | MS.gene001140:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32781 | gene | 151496 | 153894 | 151496 | ID=MS.gene001140 |
| 32781 | mRNA | 151496 | 153894 | 151496 | ID=MS.gene001140.t1;Parent=MS.gene001140 |
| 32781 | exon | 153854 | 153894 | 153854 | ID=MS.gene001140.t1.exon1;Parent=MS.gene001140.t1 |
| 32781 | CDS | 153854 | 153894 | 153854 | ID=cds.MS.gene001140.t1;Parent=MS.gene001140.t1 |
| 32781 | exon | 153006 | 153459 | 153006 | ID=MS.gene001140.t1.exon2;Parent=MS.gene001140.t1 |
| 32781 | CDS | 153006 | 153459 | 153006 | ID=cds.MS.gene001140.t1;Parent=MS.gene001140.t1 |
| 32781 | exon | 151943 | 152095 | 151943 | ID=MS.gene001140.t1.exon3;Parent=MS.gene001140.t1 |
| 32781 | CDS | 151943 | 152095 | 151943 | ID=cds.MS.gene001140.t1;Parent=MS.gene001140.t1 |
| 32781 | exon | 151496 | 151759 | 151496 | ID=MS.gene001140.t1.exon4;Parent=MS.gene001140.t1 |
| 32781 | CDS | 151496 | 151759 | 151496 | ID=cds.MS.gene001140.t1;Parent=MS.gene001140.t1 |
| Gene Sequence |
| Protein sequence |