AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54960.t1 MTR_2g007450 53.392 339 142 5 1 333 1 329 1.23e-113 336
MS.gene54960.t1 MTR_7g083740 56.024 332 80 9 3 331 2 270 2.19e-102 305
MS.gene54960.t1 MTR_1g053025 48.910 321 138 7 17 333 1 299 2.97e-92 280
MS.gene54960.t1 MTR_2g007500 47.289 332 130 8 5 333 3 292 2.25e-86 263
MS.gene54960.t1 MTR_4g098590 47.319 317 140 6 20 334 1 292 1.33e-83 258
MS.gene54960.t1 MTR_3g026920 46.246 333 131 7 16 331 17 318 4.11e-82 255
MS.gene54960.t1 MTR_5g083890 42.945 326 156 7 15 333 3 305 1.37e-65 215
MS.gene54960.t1 MTR_2g007400 41.975 324 156 10 16 334 10 306 3.60e-65 211
MS.gene54960.t1 MTR_1g107385 41.433 321 159 6 18 333 32 328 2.98e-64 209
MS.gene54960.t1 MTR_7g075820 37.576 330 169 8 15 334 3 305 5.10e-61 200
MS.gene54960.t1 MTR_3g107160 41.176 323 146 13 18 333 10 295 1.48e-59 196
MS.gene54960.t1 MTR_3g107100 40.432 324 148 11 18 334 11 296 2.29e-59 196
MS.gene54960.t1 MTR_2g007550 39.820 334 111 11 1 331 1 247 7.50e-57 188
MS.gene54960.t1 MTR_2g005990 39.308 318 165 8 16 331 4 295 4.00e-56 187
MS.gene54960.t1 MTR_2g008320 39.692 325 144 8 16 329 50 333 6.35e-56 188
MS.gene54960.t1 MTR_2g008310 38.941 321 150 8 17 331 1 281 3.43e-54 182
MS.gene54960.t1 MTR_3g107120 40.483 331 142 13 18 331 9 301 1.01e-53 181
MS.gene54960.t1 MTR_3g099830 38.050 318 145 6 16 333 10 275 1.40e-52 177
MS.gene54960.t1 MTR_2g007360 39.877 326 125 9 16 334 10 271 7.44e-51 173
MS.gene54960.t1 MTR_2g007530 46.154 195 86 3 16 191 17 211 1.75e-42 150
MS.gene54960.t1 MTR_2g007530 50.602 83 27 2 252 334 197 265 6.30e-14 72.0
MS.gene54960.t1 MTR_7g115270 33.533 334 177 10 10 329 4 306 4.20e-39 142
MS.gene54960.t1 MTR_7g007340 36.000 325 139 9 12 333 4 262 3.01e-38 140
MS.gene54960.t1 MTR_5g073420 32.831 332 165 15 8 329 1 284 4.65e-36 134
MS.gene54960.t1 MTR_7g026500 30.723 332 190 11 6 329 2 301 6.02e-33 126
MS.gene54960.t1 MTR_7g056433 33.033 333 171 15 12 333 6 297 1.23e-29 117
MS.gene54960.t1 MTR_5g058000 30.368 326 175 12 17 335 7 287 1.46e-29 116
MS.gene54960.t1 MTR_7g032380 31.707 328 140 12 15 331 8 262 2.62e-29 115
MS.gene54960.t1 MTR_1g041245 31.498 327 170 13 15 331 8 290 4.40e-29 115
MS.gene54960.t1 MTR_3g467400 33.206 262 149 9 17 267 2 248 1.09e-28 114
MS.gene54960.t1 MTR_5g058100 30.091 329 182 12 16 335 7 296 1.36e-28 114
MS.gene54960.t1 MTR_7g098570 30.861 337 179 11 1 329 7 297 2.83e-28 114
MS.gene54960.t1 MTR_8g085430 35.981 214 118 7 15 223 8 207 3.92e-28 112
MS.gene54960.t1 MTR_5g073370 32.209 326 165 13 18 331 5 286 6.34e-28 112
MS.gene54960.t1 MTR_3g105060 28.840 319 179 10 15 329 11 285 3.40e-27 110
MS.gene54960.t1 MTR_6g045333 29.878 328 185 13 17 333 60 353 8.19e-27 110
MS.gene54960.t1 MTR_6g011460 30.408 319 173 10 17 327 45 322 9.87e-27 109
MS.gene54960.t1 MTR_1g085120 30.120 332 178 12 18 335 179 470 1.24e-26 110
MS.gene54960.t1 MTR_5g073340 30.556 324 158 11 17 333 7 270 1.80e-26 107
MS.gene54960.t1 MTR_7g055943 31.366 322 171 11 16 327 38 319 3.30e-26 108
MS.gene54960.t1 MTR_7g007370 30.915 317 138 8 17 333 16 251 3.38e-26 107
MS.gene54960.t1 MTR_5g031970 28.701 331 147 14 17 335 15 268 4.24e-26 107
MS.gene54960.t1 MTR_5g045170 29.688 320 186 11 17 331 13 298 1.46e-25 106
MS.gene54960.t1 MTR_1g085120 29.878 328 176 12 18 331 92 379 1.89e-25 106
MS.gene54960.t1 MTR_1g085120 29.878 328 176 12 18 331 167 454 3.28e-25 106
MS.gene54960.t1 MTR_1g108820 29.042 334 184 10 15 334 5 299 3.79e-25 104
MS.gene54960.t1 MTR_6g022500 29.141 326 179 10 17 331 100 384 4.54e-25 105
MS.gene54960.t1 MTR_1g108820 29.003 331 182 9 15 331 5 296 8.29e-25 103
MS.gene54960.t1 MTR_1089s0010 28.391 317 179 9 17 327 7 281 1.42e-24 103
MS.gene54960.t1 MTR_7g098510 28.402 338 185 11 3 331 8 297 1.54e-24 103
MS.gene54960.t1 MTR_7g056447 35.859 198 109 5 15 212 6 185 2.14e-24 100
MS.gene54960.t1 MTR_6g040270 28.707 317 178 11 20 329 10 285 3.29e-24 102
MS.gene54960.t1 MTR_7g075800 29.513 349 182 13 15 334 6 319 6.05e-24 103
MS.gene54960.t1 MTR_3g107140 34.314 204 110 6 27 221 1 189 1.40e-23 96.7
MS.gene54960.t1 MTR_7g033915 28.834 326 163 13 15 331 8 273 1.77e-23 99.8
MS.gene54960.t1 MTR_5g082930 57.471 87 35 1 20 104 17 103 2.37e-23 96.3
MS.gene54960.t1 MTR_7g033990 28.221 326 181 9 16 331 9 291 2.58e-23 100
MS.gene54960.t1 MTR_0492s0020 27.273 341 183 10 3 334 75 359 3.84e-23 99.8
MS.gene54960.t1 MTR_0543s0010 27.273 341 183 10 3 334 75 359 4.10e-23 99.8
MS.gene54960.t1 MTR_5g008920 29.141 326 178 11 16 333 10 290 9.78e-23 98.2
MS.gene54960.t1 MTR_3g082890 28.933 356 189 11 1 334 1 314 9.81e-23 98.6
MS.gene54960.t1 MTR_7g060470 28.363 342 168 12 18 329 3 297 1.46e-22 97.4
MS.gene54960.t1 MTR_7g056420 31.562 320 157 11 18 333 9 270 2.12e-22 98.6
MS.gene54960.t1 MTR_3g082890 29.630 351 183 12 1 329 81 389 2.31e-22 97.8
MS.gene54960.t1 MTR_7g056430 31.875 320 156 11 18 333 9 270 2.32e-22 98.6
MS.gene54960.t1 MTR_4g039440 28.793 323 176 12 17 327 33 313 2.42e-22 97.4
MS.gene54960.t1 MTR_1g066830 29.193 322 186 10 14 327 4 291 6.84e-22 95.5
MS.gene54960.t1 MTR_5g061680 28.923 325 153 12 16 329 9 266 9.93e-22 94.4
MS.gene54960.t1 MTR_3g108150 29.630 324 176 13 15 329 10 290 1.24e-21 94.7
MS.gene54960.t1 MTR_3g040700 28.963 328 171 13 17 335 42 316 1.55e-21 95.1
MS.gene54960.t1 MTR_7g098480 29.794 339 173 13 3 329 8 293 6.88e-21 93.6
MS.gene54960.t1 MTR_5g045510 27.027 296 180 9 14 309 8 267 9.22e-21 92.4
MS.gene54960.t1 MTR_7g032370 28.667 300 167 12 33 331 5 258 1.15e-20 91.7
MS.gene54960.t1 MTR_7g034115 29.721 323 176 14 15 329 8 287 2.80e-20 90.9
MS.gene54960.t1 MTR_3g071850 27.829 327 193 11 17 333 23 316 5.31e-20 91.7
MS.gene54960.t1 MTR_7g007080 28.221 326 185 11 18 334 4 289 1.16e-19 89.4
MS.gene54960.t1 MTR_3g036250 29.231 325 167 13 17 331 4 275 1.59e-19 88.6
MS.gene54960.t1 MTR_7g034090 37.288 177 78 6 16 180 2 157 1.59e-19 89.4
MS.gene54960.t1 MTR_5g008950 28.440 327 163 13 20 331 1 271 2.20e-19 88.2
MS.gene54960.t1 MTR_1g013560 29.646 226 137 8 1 219 1 211 2.20e-19 88.2
MS.gene54960.t1 MTR_6g044560 29.118 340 161 13 16 327 176 463 3.66e-19 88.6
MS.gene54960.t1 MTR_1g013560 29.596 223 141 7 1 219 1 211 6.39e-19 87.4
MS.gene54960.t1 MTR_3g108560 27.576 330 183 11 14 334 16 298 1.43e-18 85.1
MS.gene54960.t1 MTR_6g044572 28.909 339 161 13 17 327 1 287 1.53e-18 86.3
MS.gene54960.t1 MTR_7g056277 27.532 316 180 10 18 327 259 531 1.63e-18 87.0
MS.gene54960.t1 MTR_5g084070 26.301 365 210 14 1 334 1 337 1.73e-18 86.3
MS.gene54960.t1 MTR_2g036470 25.538 325 206 10 16 335 12 305 2.20e-18 85.5
MS.gene54960.t1 MTR_7g056287 28.125 320 181 11 18 331 3 279 2.31e-18 85.5
MS.gene54960.t1 MTR_3g108560 27.879 330 182 12 14 334 16 298 3.65e-18 85.1
MS.gene54960.t1 MTR_3g023630 27.304 293 169 10 17 309 7 255 5.24e-18 84.3
MS.gene54960.t1 MTR_7g056280 33.929 168 102 5 20 187 8 166 5.70e-18 85.1
MS.gene54960.t1 MTR_4g134150 30.144 209 120 8 15 222 11 194 7.38e-18 81.6
MS.gene54960.t1 MTR_5g007410 27.660 329 184 14 20 333 28 317 1.49e-17 83.6
MS.gene54960.t1 MTR_8g062080 33.333 222 126 11 1 216 6 211 2.22e-17 83.2
MS.gene54960.t1 MTR_2g082800 26.837 313 189 13 1 301 9 293 3.73e-17 82.0
MS.gene54960.t1 MTR_7g114710 27.077 325 164 12 15 331 10 269 5.01e-17 81.3
MS.gene54960.t1 MTR_4g080773 25.798 376 198 14 18 331 19 375 9.82e-17 81.3
MS.gene54960.t1 MTR_4g080773 25.798 376 198 14 18 331 19 375 1.00e-16 81.3
MS.gene54960.t1 MTR_8g062310 28.755 233 141 9 4 234 11 220 1.06e-16 80.9
MS.gene54960.t1 MTR_8g058965 32.883 222 119 10 16 221 11 218 1.08e-16 80.9
MS.gene54960.t1 MTR_7g088260 26.168 321 184 9 18 329 91 367 1.27e-16 80.9
MS.gene54960.t1 MTR_2g007460 38.333 120 54 2 16 135 10 109 3.35e-16 73.9
MS.gene54960.t1 MTR_7g034110 27.778 234 148 6 15 244 8 224 4.49e-16 78.6
MS.gene54960.t1 MTR_0009s0080 27.329 322 189 10 20 331 20 306 6.72e-16 78.6
MS.gene54960.t1 MTR_5g039490 26.730 318 185 13 2 311 6 283 1.41e-15 77.4
MS.gene54960.t1 MTR_7g033470 33.140 172 61 6 8 177 4 123 1.66e-15 73.2
MS.gene54960.t1 MTR_6g022360 28.000 325 168 12 17 329 42 312 1.72e-15 77.0
MS.gene54960.t1 MTR_8g014160 30.097 206 126 9 18 215 41 236 3.32e-15 76.3
MS.gene54960.t1 MTR_3g048290 28.509 228 145 5 17 239 22 236 4.06e-15 76.3
MS.gene54960.t1 MTR_5g076150 33.514 185 102 8 154 327 26 200 4.31e-15 73.9
MS.gene54960.t1 MTR_4g080787 25.134 374 206 13 18 334 19 375 4.39e-15 76.3
MS.gene54960.t1 MTR_8g014260 30.303 231 143 7 2 229 6 221 5.14e-15 75.9
MS.gene54960.t1 MTR_8g062010 29.825 228 122 11 1 221 1 197 6.26e-15 75.5
MS.gene54960.t1 MTR_1g013580 28.384 229 136 8 1 219 1 211 8.29e-15 75.1
MS.gene54960.t1 MTR_8g467800 27.793 367 210 13 2 329 3 353 1.03e-14 75.1
MS.gene54960.t1 MTR_8g467800 31.364 220 135 8 2 219 3 208 1.06e-14 74.3
MS.gene54960.t1 MTR_2g047858 27.928 222 136 7 5 219 101 305 1.17e-14 75.1
MS.gene54960.t1 MTR_1g014450 28.910 211 124 7 18 219 16 209 1.33e-14 74.7
MS.gene54960.t1 MTR_8g445780 31.000 200 124 8 18 216 13 199 1.63e-14 74.3
MS.gene54960.t1 MTR_3g110010 33.023 215 120 7 4 218 3 193 1.67e-14 74.7
MS.gene54960.t1 MTR_3g109982 33.023 215 120 7 4 218 3 193 1.85e-14 74.7
MS.gene54960.t1 MTR_2g082850 34.899 149 79 7 1 144 9 144 3.25e-14 73.2
MS.gene54960.t1 MTR_2g091145 26.549 226 143 8 1 218 3 213 3.68e-14 73.2
MS.gene54960.t1 MTR_2g082860 52.308 65 30 1 1 64 9 73 3.82e-14 68.6
MS.gene54960.t1 MTR_3g450920 39.597 149 73 5 64 212 59 190 4.76e-14 70.9
MS.gene54960.t1 MTR_7g068570 32.911 158 84 5 15 168 2 141 6.59e-14 69.7
MS.gene54960.t1 MTR_6g029350 39.695 131 53 4 204 333 2 107 8.00e-14 70.5
MS.gene54960.t1 MTR_2g008300 54.545 66 30 0 160 225 4 69 9.31e-14 65.9
MS.gene54960.t1 MTR_1g492880 45.745 94 46 3 18 110 6 95 1.69e-13 65.9
MS.gene54960.t1 MTR_1g492880 45.745 94 46 3 18 110 6 95 1.80e-13 66.2
MS.gene54960.t1 MTR_5g005690 27.119 236 140 5 2 218 5 227 5.64e-13 69.7
MS.gene54960.t1 MTR_5g092960 28.708 209 129 7 16 216 17 213 8.29e-13 68.9
MS.gene54960.t1 MTR_5g092960 28.708 209 129 7 16 216 17 213 8.71e-13 69.3
MS.gene54960.t1 MTR_5g080710 25.691 362 211 13 9 334 24 363 9.23e-13 69.3
MS.gene54960.t1 MTR_8g468810 30.189 212 116 11 18 216 25 217 1.30e-12 68.2
MS.gene54960.t1 MTR_8g468810 30.189 212 116 11 18 216 25 217 1.44e-12 67.8
MS.gene54960.t1 MTR_3g114200 34.884 172 91 7 1 168 1 155 1.49e-12 65.1
MS.gene54960.t1 MTR_8g468810 29.858 211 118 10 18 216 25 217 1.75e-12 68.2
MS.gene54960.t1 MTR_8g468810 30.189 212 116 11 18 216 25 217 1.80e-12 67.8
MS.gene54960.t1 MTR_8g014290 31.847 157 89 5 18 163 10 159 1.88e-12 65.1
MS.gene54960.t1 MTR_8g468810 30.918 207 121 11 18 216 25 217 1.98e-12 68.2
MS.gene54960.t1 MTR_2g007090 47.619 84 38 2 16 95 8 89 2.29e-12 67.0
MS.gene54960.t1 MTR_7g033945 29.444 180 109 6 15 191 8 172 2.33e-12 65.1
MS.gene54960.t1 MTR_8g062270 24.930 357 211 12 16 329 14 356 2.51e-12 67.8
MS.gene54960.t1 MTR_8g468760 28.774 212 127 9 16 216 7 205 2.66e-12 67.8
MS.gene54960.t1 MTR_7g094030 30.688 189 104 7 4 190 18 181 5.61e-12 66.6
MS.gene54960.t1 MTR_1g115250 29.078 141 77 3 3 137 22 145 6.91e-12 66.6
MS.gene54960.t1 MTR_2g007610 55.738 61 25 2 277 335 2 62 1.36e-11 62.8
MS.gene54960.t1 MTR_3g113782 51.562 64 30 1 1 64 1 63 1.75e-11 60.1
MS.gene54960.t1 MTR_5g039470 25.397 315 179 13 35 334 2 275 1.96e-11 64.7
MS.gene54960.t1 MTR_5g087940 31.694 183 91 7 18 195 26 179 2.64e-11 64.7
MS.gene54960.t1 MTR_7g081290 40.698 86 51 0 1 86 1 86 2.79e-11 63.5
MS.gene54960.t1 MTR_8g469020 27.928 222 125 9 14 214 3 210 3.04e-11 64.7
MS.gene54960.t1 MTR_8g467790 26.627 338 179 15 17 335 147 434 3.24e-11 64.7
MS.gene54960.t1 MTR_2g007100 45.205 73 36 1 17 89 1 69 3.82e-11 58.9
MS.gene54960.t1 MTR_7g056417 30.994 171 79 7 150 309 7 149 4.34e-11 60.8
MS.gene54960.t1 MTR_1g021825 27.523 218 139 7 3 218 2 202 4.39e-11 63.9
MS.gene54960.t1 MTR_5g065100 29.258 229 130 9 14 235 4 207 4.98e-11 63.9
MS.gene54960.t1 MTR_1g021825 27.523 218 139 7 3 218 73 273 5.06e-11 63.9
MS.gene54960.t1 MTR_4g045680 31.319 182 105 5 18 195 16 181 5.23e-11 63.5
MS.gene54960.t1 MTR_2g082880 27.830 212 130 6 18 226 10 201 5.54e-11 63.5
MS.gene54960.t1 MTR_8g077460 31.313 198 127 5 18 212 10 201 5.82e-11 63.5
MS.gene54960.t1 MTR_5g021550 30.178 169 100 6 2 163 5 162 6.34e-11 60.5
MS.gene54960.t1 MTR_2g072530 31.579 152 88 5 18 167 13 150 7.11e-11 63.5
MS.gene54960.t1 MTR_2g047872 25.688 218 140 6 5 219 13 211 7.75e-11 63.2
MS.gene54960.t1 MTR_8g058970 27.948 229 142 8 5 216 6 228 7.77e-11 63.2
MS.gene54960.t1 MTR_7g023310 26.250 240 156 8 2 240 10 229 7.94e-11 63.2
MS.gene54960.t1 MTR_4g093690 27.966 236 137 9 18 247 18 226 8.64e-11 62.0
MS.gene54960.t1 MTR_4g024770 45.312 64 31 1 4 67 14 73 8.93e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54960.t1 AT4G00160 29.683 347 196 12 18 335 16 343 3.07e-27 111
MS.gene54960.t1 AT4G13985 29.778 225 142 7 4 224 5 217 6.56e-23 99.4
MS.gene54960.t1 AT4G14103 29.973 367 180 14 18 329 8 352 8.38e-22 95.5
MS.gene54960.t1 AT4G14103 29.973 367 180 14 18 329 8 352 8.38e-22 95.5
MS.gene54960.t1 AT3G52680 29.261 352 187 15 18 334 21 345 9.60e-22 95.1
MS.gene54960.t1 AT4G14103 29.973 367 180 14 18 329 8 352 1.81e-21 95.1
MS.gene54960.t1 AT1G69630 31.120 241 146 6 1 240 1 222 1.88e-21 95.1
MS.gene54960.t1 AT3G52680 29.226 349 185 15 18 331 21 342 4.70e-21 94.0
MS.gene54960.t1 AT3G59200 26.542 373 199 11 18 331 7 363 8.18e-21 92.4
MS.gene54960.t1 AT3G59200 26.542 373 199 11 18 331 7 363 1.06e-20 93.2
MS.gene54960.t1 AT5G22610 27.246 345 207 11 18 335 18 345 1.08e-20 92.8
MS.gene54960.t1 AT1G16930 29.389 262 154 9 18 271 15 253 1.75e-20 92.0
MS.gene54960.t1 AT1G16930 29.389 262 154 9 18 271 15 253 1.75e-20 92.0
MS.gene54960.t1 AT1G16930 29.389 262 154 9 18 271 15 253 1.75e-20 92.0
MS.gene54960.t1 AT4G14096 28.177 362 186 13 18 329 8 345 2.29e-20 92.0
MS.gene54960.t1 AT4G14096 28.177 362 186 13 18 329 8 345 2.29e-20 92.0
MS.gene54960.t1 AT1G66320 25.770 357 193 14 23 329 35 369 4.32e-20 91.3
MS.gene54960.t1 AT1G06630 33.654 208 110 8 18 214 12 202 5.70e-20 89.0
MS.gene54960.t1 AT1G06630 27.945 365 194 16 18 335 12 354 5.71e-20 89.7
MS.gene54960.t1 AT1G06630 27.945 365 194 16 18 335 12 354 5.71e-20 89.7
MS.gene54960.t1 AT1G06630 33.654 208 110 8 18 214 12 202 1.04e-19 89.7
MS.gene54960.t1 AT1G06630 33.654 208 110 8 18 214 12 202 1.04e-19 89.7
MS.gene54960.t1 AT1G06630 33.654 208 110 8 18 214 12 202 1.04e-19 89.7
MS.gene54960.t1 AT1G06630 33.654 208 110 8 18 214 12 202 1.04e-19 89.7
MS.gene54960.t1 AT1G78750 25.823 395 195 17 2 329 3 366 1.29e-19 89.7
MS.gene54960.t1 AT1G78750 25.823 395 195 17 2 329 3 366 1.29e-19 89.7
MS.gene54960.t1 AT1G06630 33.654 208 110 8 18 214 12 202 1.34e-19 89.7
MS.gene54960.t1 AT1G06630 33.654 208 110 8 18 214 21 211 1.39e-19 89.4
MS.gene54960.t1 AT3G51530 26.496 351 208 12 9 331 21 349 1.77e-19 89.4
MS.gene54960.t1 AT5G22720 31.980 197 118 5 18 214 23 203 3.50e-19 88.6
MS.gene54960.t1 AT1G51370 26.761 213 131 4 2 214 4 191 2.00e-18 85.5
MS.gene54960.t1 AT1G51370 26.761 213 131 4 2 214 4 191 2.51e-18 85.5
MS.gene54960.t1 AT4G26340 29.360 344 192 11 17 331 1 322 2.52e-18 85.9
MS.gene54960.t1 AT1G51370 26.761 213 131 4 2 214 4 191 3.30e-18 85.5
MS.gene54960.t1 AT5G56820 27.679 336 196 13 18 331 15 325 3.98e-18 85.1
MS.gene54960.t1 AT3G60040 26.486 370 193 17 18 329 13 361 4.22e-18 85.5
MS.gene54960.t1 AT3G59210 33.019 212 112 8 18 219 7 198 4.49e-18 85.1
MS.gene54960.t1 AT3G59210 33.019 212 112 8 18 219 7 198 4.49e-18 85.1
MS.gene54960.t1 AT3G59210 33.019 212 112 8 18 219 7 198 4.49e-18 85.1
MS.gene54960.t1 AT3G59210 33.019 212 112 8 18 219 7 198 4.49e-18 85.1
MS.gene54960.t1 AT3G59210 33.019 212 112 8 18 219 7 198 4.49e-18 85.1
MS.gene54960.t1 AT1G66290 24.808 391 204 15 2 331 5 366 4.67e-18 85.1
MS.gene54960.t1 AT3G60040 26.486 370 193 17 18 329 233 581 6.58e-18 85.1
MS.gene54960.t1 AT3G60040 26.667 375 186 18 18 329 232 580 7.22e-18 85.1
MS.gene54960.t1 AT3G60040 26.849 365 198 16 18 329 230 578 7.39e-18 85.1
MS.gene54960.t1 AT3G60040 26.849 365 198 16 18 329 232 580 7.68e-18 85.1
MS.gene54960.t1 AT4G13965 28.070 342 194 14 18 331 10 327 1.04e-17 84.0
MS.gene54960.t1 AT5G22610 25.134 374 208 12 18 335 18 375 2.30e-17 83.2
MS.gene54960.t1 AT5G53640 27.854 219 131 7 4 217 3 199 2.53e-17 80.1
MS.gene54960.t1 AT5G56440 26.667 345 204 10 17 333 1 324 3.63e-17 82.4
MS.gene54960.t1 AT5G22700 26.586 331 197 11 18 331 43 344 3.65e-17 82.4
MS.gene54960.t1 AT5G56420 27.221 349 197 14 18 333 6 330 4.35e-17 82.0
MS.gene54960.t1 AT5G56420 27.221 349 197 14 18 333 6 330 4.35e-17 82.0
MS.gene54960.t1 AT5G56420 27.221 349 197 14 18 333 6 330 4.35e-17 82.0
MS.gene54960.t1 AT1G78760 28.436 211 128 5 4 214 8 195 5.42e-17 82.0
MS.gene54960.t1 AT5G56370 28.367 349 188 15 17 334 1 318 5.74e-17 80.9
MS.gene54960.t1 AT5G22700 29.778 225 131 7 18 239 6 206 6.86e-17 81.6
MS.gene54960.t1 AT5G22700 29.778 225 131 7 18 239 6 206 6.86e-17 81.6
MS.gene54960.t1 AT5G22700 29.778 225 131 7 18 239 6 206 6.86e-17 81.6
MS.gene54960.t1 AT5G22700 29.778 225 131 7 18 239 6 206 6.86e-17 81.6
MS.gene54960.t1 AT5G22700 29.778 225 131 7 18 239 43 243 7.38e-17 81.6
MS.gene54960.t1 AT3G26922 31.696 224 126 9 18 239 14 212 8.47e-17 80.1
MS.gene54960.t1 AT3G26922 31.696 224 126 9 18 239 14 212 8.47e-17 80.1
MS.gene54960.t1 AT2G29930 26.124 356 197 12 18 329 12 345 1.59e-16 80.5
MS.gene54960.t1 AT2G29930 26.124 356 197 12 18 329 12 345 1.59e-16 80.5
MS.gene54960.t1 AT5G41830 30.172 232 141 8 18 239 13 233 2.42e-16 80.1
MS.gene54960.t1 AT3G58860 24.022 358 209 11 17 331 6 343 2.67e-16 79.7
MS.gene54960.t1 AT5G56380 33.333 213 116 9 17 221 1 195 4.53e-16 79.0
MS.gene54960.t1 AT5G56380 33.333 213 116 9 17 221 1 195 4.53e-16 79.0
MS.gene54960.t1 AT5G22660 29.565 230 126 6 18 241 13 212 4.61e-16 78.2
MS.gene54960.t1 AT5G22660 29.694 229 127 6 18 241 13 212 6.20e-16 79.0
MS.gene54960.t1 AT5G56370 28.070 342 192 13 17 331 1 315 6.69e-16 78.6
MS.gene54960.t1 AT5G56370 28.070 342 192 13 17 331 1 315 6.69e-16 78.6
MS.gene54960.t1 AT3G44060 33.486 218 124 8 23 236 4 204 1.03e-15 78.2
MS.gene54960.t1 AT5G22730 26.872 227 144 6 18 244 28 232 1.04e-15 78.2
MS.gene54960.t1 AT5G22730 26.872 227 144 6 18 244 28 232 1.04e-15 78.2
MS.gene54960.t1 AT3G58980 26.902 368 196 16 17 329 1 350 1.45e-15 78.2
MS.gene54960.t1 AT5G22730 26.872 227 144 6 18 244 28 232 1.52e-15 77.4
MS.gene54960.t1 AT5G53635 28.444 225 134 8 20 240 2 203 2.72e-15 76.6
MS.gene54960.t1 AT2G29910 32.487 197 111 7 18 213 5 180 2.76e-15 76.3
MS.gene54960.t1 AT2G29910 32.487 197 111 7 18 213 5 180 2.76e-15 76.3
MS.gene54960.t1 AT3G26930 29.915 351 179 17 18 331 21 341 3.19e-15 76.6
MS.gene54960.t1 AT3G50710 29.532 342 199 12 17 331 1 327 3.67e-15 76.3
MS.gene54960.t1 AT2G29910 32.487 197 111 7 18 213 5 180 3.85e-15 75.9
MS.gene54960.t1 AT2G29910 32.487 197 111 7 18 213 5 180 3.85e-15 75.9
MS.gene54960.t1 AT2G29910 32.487 197 111 7 18 213 5 180 3.85e-15 75.9
MS.gene54960.t1 AT2G29910 32.487 197 111 7 18 213 5 180 3.85e-15 75.9
MS.gene54960.t1 AT2G29910 32.487 197 111 7 18 213 29 204 4.26e-15 75.9
MS.gene54960.t1 AT5G25850 27.523 218 133 8 1 216 2 196 4.36e-15 76.3
MS.gene54960.t1 AT3G58940 29.565 230 146 8 17 240 1 220 4.66e-15 76.6
MS.gene54960.t1 AT3G58940 29.565 230 146 8 17 240 1 220 4.66e-15 76.6
MS.gene54960.t1 AT3G58960 26.423 246 158 8 17 258 1 227 8.12e-15 75.5
MS.gene54960.t1 AT4G26350 30.198 202 120 5 17 216 1 183 1.02e-14 75.1
MS.gene54960.t1 AT5G53840 28.571 203 118 6 18 217 18 196 1.06e-14 75.1
MS.gene54960.t1 AT3G59160 25.320 391 199 13 18 329 13 389 1.23e-14 75.1
MS.gene54960.t1 AT3G58880 29.630 243 144 8 17 249 2 227 2.14e-14 74.3
MS.gene54960.t1 AT3G58920 28.571 210 132 8 17 219 1 199 2.29e-14 73.9
MS.gene54960.t1 AT5G22670 29.825 228 132 8 18 242 11 213 4.60e-14 73.2
MS.gene54960.t1 AT5G41630 29.661 236 135 9 18 239 12 230 5.64e-14 72.8
MS.gene54960.t1 AT3G44810 31.513 238 130 10 20 243 9 227 9.26e-14 72.4
MS.gene54960.t1 AT5G41840 29.437 231 145 6 18 239 14 235 1.27e-13 72.0
MS.gene54960.t1 AT3G59190 28.270 237 138 8 18 244 12 226 1.27e-13 71.6
MS.gene54960.t1 AT1G32375 27.954 347 199 13 17 331 1 328 1.51e-13 71.6
MS.gene54960.t1 AT1G32375 27.954 347 199 13 17 331 1 328 1.51e-13 71.6
MS.gene54960.t1 AT3G59190 28.270 237 138 8 18 244 12 226 1.89e-13 71.6
MS.gene54960.t1 AT1G13780 26.210 248 139 11 10 240 2 222 2.31e-13 70.9
MS.gene54960.t1 AT4G00320 30.043 233 140 9 18 239 13 233 2.63e-13 70.9
MS.gene54960.t1 AT1G66300 22.081 394 211 15 2 329 5 368 2.91e-13 70.9
MS.gene54960.t1 AT1G13780 26.210 248 139 11 10 240 2 222 2.91e-13 70.1
MS.gene54960.t1 AT5G44490 25.909 220 141 6 18 235 17 216 3.36e-13 70.5
MS.gene54960.t1 AT5G44490 25.909 220 141 6 18 235 17 216 3.87e-13 70.5
MS.gene54960.t1 AT2G04230 26.781 351 206 13 18 334 13 346 5.22e-13 70.1
MS.gene54960.t1 AT3G59230 26.609 233 141 7 18 235 12 229 5.56e-13 70.1
MS.gene54960.t1 AT5G60610 30.952 210 100 7 17 214 1 177 5.71e-13 69.7
MS.gene54960.t1 AT5G60610 30.952 210 100 7 17 214 1 177 5.71e-13 69.7
MS.gene54960.t1 AT5G35995 33.173 208 109 9 18 219 5 188 8.44e-13 69.3
MS.gene54960.t1 AT5G35995 33.173 208 109 9 18 219 5 188 8.44e-13 69.3
MS.gene54960.t1 AT4G27050 30.374 214 116 8 18 214 4 201 1.00e-12 68.9
MS.gene54960.t1 AT4G27050 30.374 214 116 8 18 214 4 201 1.00e-12 68.9
MS.gene54960.t1 AT4G27050 30.374 214 116 8 18 214 4 201 1.00e-12 68.9
MS.gene54960.t1 AT4G27050 30.374 214 116 8 18 214 4 201 1.00e-12 68.9
MS.gene54960.t1 AT4G27050 30.374 214 116 8 18 214 4 201 1.00e-12 68.9
MS.gene54960.t1 AT5G44950 23.224 366 207 12 18 331 4 347 1.07e-12 68.9
MS.gene54960.t1 AT1G66310 22.102 371 221 11 5 329 6 354 1.08e-12 68.9
MS.gene54960.t1 AT2G26030 27.638 199 119 9 18 212 4 181 1.18e-12 68.9
MS.gene54960.t1 AT2G26030 27.638 199 119 9 18 212 4 181 1.18e-12 68.9
MS.gene54960.t1 AT2G26030 28.643 199 117 9 18 212 4 181 1.26e-12 68.9
MS.gene54960.t1 AT4G22280 25.212 353 199 13 17 329 1 328 1.42e-12 68.6
MS.gene54960.t1 AT4G22280 25.212 353 199 13 17 329 1 328 1.43e-12 68.2
MS.gene54960.t1 AT1G48400 30.144 209 119 8 18 218 10 199 1.46e-12 68.9
MS.gene54960.t1 AT1G48400 30.144 209 119 8 18 218 10 199 1.74e-12 68.6
MS.gene54960.t1 AT5G56690 29.665 209 114 10 19 216 3 189 1.89e-12 68.2
MS.gene54960.t1 AT4G15060 31.081 222 121 10 17 228 25 224 2.23e-12 67.8
MS.gene54960.t1 AT3G42770 32.195 205 117 7 20 216 1 191 2.33e-12 68.2
MS.gene54960.t1 AT4G15060 31.081 222 121 10 17 228 171 370 2.87e-12 67.8
MS.gene54960.t1 AT1G64540 31.527 203 104 9 20 218 7 178 2.93e-12 67.8
MS.gene54960.t1 AT1G64540 31.527 203 104 9 20 218 7 178 2.93e-12 67.8
MS.gene54960.t1 AT5G18780 25.974 231 145 6 18 246 11 217 3.49e-12 67.0
MS.gene54960.t1 AT5G18780 25.974 231 145 6 18 246 11 217 3.49e-12 67.0
MS.gene54960.t1 AT5G38590 30.374 214 103 9 17 216 1 182 3.71e-12 66.2
MS.gene54960.t1 AT5G18780 25.974 231 145 6 18 246 11 217 3.72e-12 67.4
MS.gene54960.t1 AT5G18780 25.974 231 145 6 18 246 11 217 3.72e-12 67.4
MS.gene54960.t1 AT2G26860 29.268 205 123 7 17 216 1 188 3.82e-12 67.0
MS.gene54960.t1 AT2G26860 29.268 205 123 7 17 216 1 188 3.82e-12 67.0
MS.gene54960.t1 AT3G62440 23.138 376 212 13 17 331 1 360 5.14e-12 67.0
MS.gene54960.t1 AT3G49020 27.042 355 184 14 18 331 22 342 5.32e-12 67.0
MS.gene54960.t1 AT3G58930 28.452 239 136 10 17 240 1 219 6.62e-12 66.6
MS.gene54960.t1 AT3G58930 28.452 239 136 10 17 240 1 219 6.62e-12 66.6
MS.gene54960.t1 AT3G58930 28.452 239 136 10 17 240 1 219 6.62e-12 66.6
MS.gene54960.t1 AT5G38590 30.374 214 103 9 17 216 1 182 7.27e-12 66.2
MS.gene54960.t1 AT5G56410 29.289 239 139 10 17 241 1 223 8.12e-12 66.6
MS.gene54960.t1 AT3G59240 24.242 363 204 12 18 329 8 350 8.51e-12 66.2
MS.gene54960.t1 AT1G78730 26.733 202 107 5 17 216 21 183 1.50e-11 65.5
MS.gene54960.t1 AT5G18770 25.871 201 132 6 18 216 24 209 1.51e-11 65.5
MS.gene54960.t1 AT3G62430 25.485 361 203 16 17 331 1 341 1.56e-11 65.5
MS.gene54960.t1 AT3G26922 29.464 224 106 9 18 239 14 187 1.58e-11 64.3
MS.gene54960.t1 AT5G18770 25.871 201 132 6 18 216 24 209 1.77e-11 65.1
MS.gene54960.t1 AT3G59000 30.729 192 104 8 17 196 1 175 2.18e-11 65.1
MS.gene54960.t1 AT1G55660 28.125 224 134 11 17 236 52 252 2.26e-11 65.1
MS.gene54960.t1 AT3G49040 27.755 245 147 8 18 256 17 237 2.27e-11 64.3
MS.gene54960.t1 AT5G38390 30.165 242 144 8 17 256 1 219 2.56e-11 64.7
MS.gene54960.t1 AT1G55660 28.125 224 134 11 17 236 52 252 2.72e-11 64.3
MS.gene54960.t1 AT2G42730 29.108 213 121 9 16 216 3 197 2.96e-11 64.7
MS.gene54960.t1 AT1G80470 29.353 201 124 6 18 217 15 198 3.53e-11 64.3
MS.gene54960.t1 AT4G00315 28.293 205 125 8 17 216 1 188 3.84e-11 64.3
MS.gene54960.t1 AT3G44080 31.000 200 105 6 10 198 2 179 4.78e-11 63.9
MS.gene54960.t1 AT1G26890 30.065 153 78 4 19 166 39 167 5.21e-11 63.2
MS.gene54960.t1 AT1G26890 30.065 153 78 4 19 166 39 167 5.21e-11 63.2
MS.gene54960.t1 AT3G59150 31.308 214 127 7 9 216 4 203 6.30e-11 63.5
MS.gene54960.t1 AT1G26890 30.065 153 78 4 19 166 39 167 6.60e-11 63.5
MS.gene54960.t1 AT1G26890 30.065 153 78 4 19 166 39 167 6.73e-11 63.2
MS.gene54960.t1 AT1G26890 30.065 153 78 4 19 166 39 167 6.73e-11 63.2
MS.gene54960.t1 AT1G78840 26.263 198 123 6 23 220 11 185 7.48e-11 63.5
MS.gene54960.t1 AT1G78840 26.263 198 123 6 23 220 11 185 7.48e-11 63.5

Find 76 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGGAGCTCTACAATAAT+TGG 0.170311 7.2:-23638820 MS.gene54960:CDS
CAGTGTTACCGTATTCAATT+TGG 0.211261 7.2:+23639717 None:intergenic
GAGAATACTAACAGGCAATT+TGG 0.240338 7.2:+23639574 None:intergenic
GACATCAGCACTCGTCAATT+TGG 0.243095 7.2:+23639307 None:intergenic
TCGTAGACTTTGCTGTCTTT+TGG 0.249972 7.2:+23639203 None:intergenic
ACTGATCTTGCCTTTCATTT+CGG 0.307632 7.2:-23639698 MS.gene54960:CDS
GCTTGTGGCAACTGCCTCTT+TGG 0.307775 7.2:+23639907 None:intergenic
CGTCTCCACATCAGTGTTGA+TGG 0.340548 7.2:-23639617 MS.gene54960:CDS
GCTCTACAATAATTGGGATT+TGG 0.346221 7.2:-23638813 MS.gene54960:CDS
TTTGAAGCTTAGGGCAGTAT+TGG 0.392491 7.2:+23638777 None:intergenic
TTTGGAGGTTGAATCTGTTA+AGG 0.394656 7.2:+23639735 None:intergenic
ACTCGTATATGCTCAAGAAT+TGG 0.395534 7.2:+23639392 None:intergenic
AGAATACTAACAGGCAATTT+GGG 0.406306 7.2:+23639575 None:intergenic
GAAAGCACTATCTAATTTAG+AGG 0.406834 7.2:-23639255 MS.gene54960:CDS
CAAAGAGATGGATTCATCTC+TGG 0.414916 7.2:-23639877 MS.gene54960:CDS
ACATCAGCACTCGTCAATTT+GGG 0.415194 7.2:+23639308 None:intergenic
GTGGCAACTGCCTCTTTGGT+AGG 0.416415 7.2:+23639911 None:intergenic
TCAAAATCTCAAACTTTGCC+AGG 0.417001 7.2:-23638759 MS.gene54960:CDS
CTTTCATAATTTGACCCACT+TGG 0.418429 7.2:-23638837 MS.gene54960:CDS
GTGGGTCAAATTATGAAAGA+TGG 0.421361 7.2:+23638841 None:intergenic
TTACTCTCTCGTGAAGCTGC+TGG 0.430022 7.2:-23639767 MS.gene54960:CDS
CTTGGAGCTCTACAATAATT+GGG 0.431642 7.2:-23638819 MS.gene54960:CDS
GCATTCACAATGTCAACAAA+TGG 0.443430 7.2:-23639676 MS.gene54960:CDS
CCTCGGTTTGTTCTATGTGA+AGG 0.446830 7.2:-23639525 MS.gene54960:CDS
AGCTTCACGAGAGAGTAAAA+TGG 0.450901 7.2:+23639772 None:intergenic
CTCGGTTTGTTCTATGTGAA+GGG 0.459804 7.2:-23639524 MS.gene54960:CDS
CTACATGTGAGAATACTAAC+AGG 0.463981 7.2:+23639566 None:intergenic
TGGCAACTGCCTCTTTGGTA+GGG 0.482329 7.2:+23639912 None:intergenic
ATCTTATCCACCGCTGGTGG+TGG 0.483228 7.2:+23639980 None:intergenic
TTCAACCTCCAAATTGAATA+CGG 0.499728 7.2:-23639725 MS.gene54960:CDS
AGCTGATTCATATCATCGTA+AGG 0.507253 7.2:+23638884 None:intergenic
ATCTGACTCAGAATCGCGTC+GGG 0.511814 7.2:+23639947 None:intergenic
TTATCCACCGCTGGTGGTGG+TGG 0.512107 7.2:+23639983 None:intergenic
TGTTACCGTATTCAATTTGG+AGG 0.512619 7.2:+23639720 None:intergenic
AGATCATATCATTCAGATGA+AGG 0.525978 7.2:+23639456 None:intergenic
TGGGTCAAATTATGAAAGAT+GGG 0.528466 7.2:+23638842 None:intergenic
AAGATGGGAATATCATCGTA+AGG 0.544194 7.2:+23638857 None:intergenic
TCTTGAGCATATACGAGTGA+TGG 0.547394 7.2:-23639387 MS.gene54960:CDS
CAAGCATTCTCTCAAAGAGA+TGG 0.549944 7.2:-23639889 MS.gene54960:CDS
CTGCTGATCTTATCCACCGC+TGG 0.553010 7.2:+23639974 None:intergenic
GTGCTGATGTCACTCATTGG+TGG 0.562739 7.2:-23639295 MS.gene54960:CDS
AAGAAGAAATGGGGCGACGG+AGG 0.571428 7.2:-23640024 None:intergenic
AACAAGAAGAAATGGGGCGA+CGG 0.574256 7.2:-23640027 None:intergenic
CTGATTCATATCATCGTAAG+GGG 0.577220 7.2:+23638886 None:intergenic
CGAGTGCTGATGTCACTCAT+TGG 0.589381 7.2:-23639298 MS.gene54960:CDS
GTCTCGTATCCCTACCAAAG+AGG 0.593043 7.2:-23639921 MS.gene54960:CDS
ATTCTTAGACTTAACAAACC+TGG 0.593791 7.2:+23638741 None:intergenic
AGATGGGAATATCATCGTAA+GGG 0.594366 7.2:+23638858 None:intergenic
GATGGGAATATCATCGTAAG+GGG 0.594871 7.2:+23638859 None:intergenic
AAATTAGATAGTGCTTTCAC+CGG 0.599111 7.2:+23639260 None:intergenic
TCTCTTTGAGAGAATGCTTG+TGG 0.599916 7.2:+23639892 None:intergenic
CGATTTCACCGACATCACAC+TGG 0.600714 7.2:-23639837 MS.gene54960:CDS
GTGATGGATATATACTTCCA+TGG 0.601627 7.2:-23639371 MS.gene54960:CDS
GCTGATTCATATCATCGTAA+GGG 0.604237 7.2:+23638885 None:intergenic
AGATGAAGGACATTGAGTGA+TGG 0.605370 7.2:+23639470 None:intergenic
AGTATCATCCAGTGTGATGT+CGG 0.610085 7.2:+23639829 None:intergenic
AGCACCACCACCACCAGCGG+TGG 0.617768 7.2:-23639987 MS.gene54960:CDS
CTGATCTTATCCACCGCTGG+TGG 0.625637 7.2:+23639977 None:intergenic
AGAAGCACCACCACCACCAG+CGG 0.633130 7.2:-23639990 MS.gene54960:CDS
AATCTGACTCAGAATCGCGT+CGG 0.636437 7.2:+23639946 None:intergenic
CATCTCTGGAAATTCATCGA+CGG 0.650217 7.2:-23639863 MS.gene54960:CDS
GGATATATACTTCCATGGTG+TGG 0.650716 7.2:-23639366 MS.gene54960:CDS
TGAGTTTGCGTTGAGCAATG+AGG 0.653315 7.2:+23639648 None:intergenic
ACACTTGTAACTCTCGACCT+CGG 0.655100 7.2:-23639542 MS.gene54960:CDS
CAATGGAATCTTCCACACCA+TGG 0.661038 7.2:+23639354 None:intergenic
GGAGGCCATCAACACTGATG+TGG 0.666800 7.2:+23639612 None:intergenic
ATTGTGAATGCCGAAATGAA+AGG 0.673163 7.2:+23639688 None:intergenic
TGGGTATGTCACTGATGTGG+AGG 0.676795 7.2:+23639594 None:intergenic
TTCACGAGAGAGTAAAATGG+AGG 0.676982 7.2:+23639775 None:intergenic
ATTTGGGTATGTCACTGATG+TGG 0.689582 7.2:+23639591 None:intergenic
ATTATTGTAGAGCTCCAAGT+GGG 0.693136 7.2:+23638823 None:intergenic
AAAAGACAGCAAAGTCTACG+AGG 0.720545 7.2:-23639201 MS.gene54960:intron
ATGGGAATATCATCGTAAGG+GGG 0.721319 7.2:+23638860 None:intergenic
TGATTCATATCATCGTAAGG+GGG 0.722894 7.2:+23638887 None:intergenic
AATTATTGTAGAGCTCCAAG+TGG 0.731196 7.2:+23638822 None:intergenic
CCTTCACATAGAACAAACCG+AGG 0.741411 7.2:+23639525 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGAAATTTCATATTGA+AGG - chr7.2:23639634-23639653 MS.gene54960:CDS 15.0%
!! GCATTATATTCAAAATAAAA+CGG + chr7.2:23639593-23639612 None:intergenic 15.0%
!! AAAAATTCACAACAACAAAA+GGG + chr7.2:23639811-23639830 None:intergenic 20.0%
!! TTTCAATATTATATAGACTG+AGG + chr7.2:23639623-23639642 None:intergenic 20.0%
! AAAATTCACAACAACAAAAG+GGG + chr7.2:23639810-23639829 None:intergenic 25.0%
! CAAAAATTCACAACAACAAA+AGG + chr7.2:23639812-23639831 None:intergenic 25.0%
! TCTACAATTTGATTATGTGT+TGG - chr7.2:23639707-23639726 MS.gene54960:CDS 25.0%
! TGTAATCAATTGTGCTATAT+TGG + chr7.2:23639671-23639690 None:intergenic 25.0%
!! GATTTTTCTTGTATTGGATT+TGG - chr7.2:23639270-23639289 MS.gene54960:CDS 25.0%
!! TAAGCTTTTAAACTCTTCAA+TGG + chr7.2:23639433-23639452 None:intergenic 25.0%
!!! GGTTTTGATTTTTCTTGTAT+TGG - chr7.2:23639264-23639283 MS.gene54960:CDS 25.0%
AAATTAGATAGTGCTTTCAC+CGG + chr7.2:23639510-23639529 None:intergenic 30.0%
ACAAAAAATCTCGAAGTTCA+TGG + chr7.2:23639338-23639357 None:intergenic 30.0%
ACTGATGAAATGGAATAGAA+TGG - chr7.2:23639746-23639765 MS.gene54960:CDS 30.0%
AGAATACTAACAGGCAATTT+GGG + chr7.2:23639195-23639214 None:intergenic 30.0%
AGATCATATCATTCAGATGA+AGG + chr7.2:23639314-23639333 None:intergenic 30.0%
CTGAATTATGTAGAAAGACA+CGG + chr7.2:23639848-23639867 None:intergenic 30.0%
CTGATGAAATGGAATAGAAT+GGG - chr7.2:23639747-23639766 MS.gene54960:CDS 30.0%
GAATACATTCACTGATGAAA+TGG - chr7.2:23639736-23639755 MS.gene54960:CDS 30.0%
TGGGTCAAATTATGAAAGAT+GGG + chr7.2:23639928-23639947 None:intergenic 30.0%
TTCAACCTCCAAATTGAATA+CGG - chr7.2:23639042-23639061 MS.gene54960:intron 30.0%
! ATTTCATATTGAAGGTGTGT+TGG - chr7.2:23639642-23639661 MS.gene54960:CDS 30.0%
!! GAAAGCACTATCTAATTTAG+AGG - chr7.2:23639512-23639531 MS.gene54960:CDS 30.0%
!!! AGTTTGAGATTTTGAAGCTT+AGG + chr7.2:23640003-23640022 None:intergenic 30.0%
!!! GTTTGAGATTTTGAAGCTTA+GGG + chr7.2:23640002-23640021 None:intergenic 30.0%
AAAGACACGGTATCAAATTG+GGG + chr7.2:23639835-23639854 None:intergenic 35.0%
AAGATGGGAATATCATCGTA+AGG + chr7.2:23639913-23639932 None:intergenic 35.0%
AATTATTGTAGAGCTCCAAG+TGG + chr7.2:23639948-23639967 None:intergenic 35.0%
ACTCGTATATGCTCAAGAAT+TGG + chr7.2:23639378-23639397 None:intergenic 35.0%
ACTGATCTTGCCTTTCATTT+CGG - chr7.2:23639069-23639088 MS.gene54960:intron 35.0%
ACTTGGAGCTCTACAATAAT+TGG - chr7.2:23639947-23639966 MS.gene54960:CDS 35.0%
AGAAAGACACGGTATCAAAT+TGG + chr7.2:23639837-23639856 None:intergenic 35.0%
AGATGGGAATATCATCGTAA+GGG + chr7.2:23639912-23639931 None:intergenic 35.0%
ATTATTGTAGAGCTCCAAGT+GGG + chr7.2:23639947-23639966 None:intergenic 35.0%
ATTGTGAATGCCGAAATGAA+AGG + chr7.2:23639082-23639101 None:intergenic 35.0%
CAGTGTTACCGTATTCAATT+TGG + chr7.2:23639053-23639072 None:intergenic 35.0%
CGTGTCTTTCTACATAATTC+AGG - chr7.2:23639846-23639865 MS.gene54960:CDS 35.0%
CTACATGTGAGAATACTAAC+AGG + chr7.2:23639204-23639223 None:intergenic 35.0%
CTGATTCATATCATCGTAAG+GGG + chr7.2:23639884-23639903 None:intergenic 35.0%
CTTGGAGCTCTACAATAATT+GGG - chr7.2:23639948-23639967 MS.gene54960:CDS 35.0%
CTTTCATAATTTGACCCACT+TGG - chr7.2:23639930-23639949 MS.gene54960:CDS 35.0%
GAAAGACACGGTATCAAATT+GGG + chr7.2:23639836-23639855 None:intergenic 35.0%
GAGAATACTAACAGGCAATT+TGG + chr7.2:23639196-23639215 None:intergenic 35.0%
GCATTCACAATGTCAACAAA+TGG - chr7.2:23639091-23639110 MS.gene54960:intron 35.0%
GCTCTACAATAATTGGGATT+TGG - chr7.2:23639954-23639973 MS.gene54960:CDS 35.0%
GTGGGTCAAATTATGAAAGA+TGG + chr7.2:23639929-23639948 None:intergenic 35.0%
TCAAAATCTCAAACTTTGCC+AGG - chr7.2:23640008-23640027 MS.gene54960:CDS 35.0%
TGAAATGGAATAGAATGGGA+TGG - chr7.2:23639751-23639770 MS.gene54960:CDS 35.0%
TGATTCATATCATCGTAAGG+GGG + chr7.2:23639883-23639902 None:intergenic 35.0%
TGTTACCGTATTCAATTTGG+AGG + chr7.2:23639050-23639069 None:intergenic 35.0%
TTTGGAGGTTGAATCTGTTA+AGG + chr7.2:23639035-23639054 None:intergenic 35.0%
! AGCTGATTCATATCATCGTA+AGG + chr7.2:23639886-23639905 None:intergenic 35.0%
! GCTGATTCATATCATCGTAA+GGG + chr7.2:23639885-23639904 None:intergenic 35.0%
!! GTGATGGATATATACTTCCA+TGG - chr7.2:23639396-23639415 MS.gene54960:CDS 35.0%
!! TTGGTGGTCTTCATATTTTC+CGG - chr7.2:23639488-23639507 MS.gene54960:CDS 35.0%
!!! GATTTTTTGTCGCTTTTAGC+TGG - chr7.2:23639348-23639367 MS.gene54960:CDS 35.0%
AAAAGACAGCAAAGTCTACG+AGG - chr7.2:23639566-23639585 MS.gene54960:CDS 40.0%
ACATCAGCACTCGTCAATTT+GGG + chr7.2:23639462-23639481 None:intergenic 40.0%
AGATGAAGGACATTGAGTGA+TGG + chr7.2:23639300-23639319 None:intergenic 40.0%
AGCTTCACGAGAGAGTAAAA+TGG + chr7.2:23638998-23639017 None:intergenic 40.0%
AGTATCATCCAGTGTGATGT+CGG + chr7.2:23638941-23638960 None:intergenic 40.0%
ATGGGAATATCATCGTAAGG+GGG + chr7.2:23639910-23639929 None:intergenic 40.0%
ATTTGGGTATGTCACTGATG+TGG + chr7.2:23639179-23639198 None:intergenic 40.0%
CAAGCATTCTCTCAAAGAGA+TGG - chr7.2:23638878-23638897 MS.gene54960:CDS 40.0%
GATGGGAATATCATCGTAAG+GGG + chr7.2:23639911-23639930 None:intergenic 40.0%
GGATATATACTTCCATGGTG+TGG - chr7.2:23639401-23639420 MS.gene54960:CDS 40.0%
TCTTGAGCATATACGAGTGA+TGG - chr7.2:23639380-23639399 MS.gene54960:CDS 40.0%
TTCACGAGAGAGTAAAATGG+AGG + chr7.2:23638995-23639014 None:intergenic 40.0%
! CAAAGAGATGGATTCATCTC+TGG - chr7.2:23638890-23638909 MS.gene54960:CDS 40.0%
! CATCTCTGGAAATTCATCGA+CGG - chr7.2:23638904-23638923 MS.gene54960:intron 40.0%
! CTCGGTTTGTTCTATGTGAA+GGG - chr7.2:23639243-23639262 MS.gene54960:CDS 40.0%
! TCTCTTTGAGAGAATGCTTG+TGG + chr7.2:23638878-23638897 None:intergenic 40.0%
! TTTGAAGCTTAGGGCAGTAT+TGG + chr7.2:23639993-23640012 None:intergenic 40.0%
!! CGTAGACTTTGCTGTCTTTT+GGG + chr7.2:23639566-23639585 None:intergenic 40.0%
!! TCGTAGACTTTGCTGTCTTT+TGG + chr7.2:23639567-23639586 None:intergenic 40.0%
AATCTGACTCAGAATCGCGT+CGG + chr7.2:23638824-23638843 None:intergenic 45.0%
ACACTTGTAACTCTCGACCT+CGG - chr7.2:23639225-23639244 MS.gene54960:CDS 45.0%
CAATGGAATCTTCCACACCA+TGG + chr7.2:23639416-23639435 None:intergenic 45.0%
CCTTCACATAGAACAAACCG+AGG + chr7.2:23639245-23639264 None:intergenic 45.0%
GACATCAGCACTCGTCAATT+TGG + chr7.2:23639463-23639482 None:intergenic 45.0%
TGAGTTTGCGTTGAGCAATG+AGG + chr7.2:23639122-23639141 None:intergenic 45.0%
! CCTCGGTTTGTTCTATGTGA+AGG - chr7.2:23639242-23639261 MS.gene54960:CDS 45.0%
ATCTGACTCAGAATCGCGTC+GGG + chr7.2:23638823-23638842 None:intergenic 50.0%
CGATTTCACCGACATCACAC+TGG - chr7.2:23638930-23638949 MS.gene54960:intron 50.0%
GTCTCGTATCCCTACCAAAG+AGG - chr7.2:23638846-23638865 MS.gene54960:CDS 50.0%
TGGCAACTGCCTCTTTGGTA+GGG + chr7.2:23638858-23638877 None:intergenic 50.0%
TGGGTATGTCACTGATGTGG+AGG + chr7.2:23639176-23639195 None:intergenic 50.0%
TTACTCTCTCGTGAAGCTGC+TGG - chr7.2:23639000-23639019 MS.gene54960:intron 50.0%
! CGTCTCCACATCAGTGTTGA+TGG - chr7.2:23639150-23639169 MS.gene54960:intron 50.0%
! GTGCTGATGTCACTCATTGG+TGG - chr7.2:23639472-23639491 MS.gene54960:CDS 50.0%
!! CGAGTGCTGATGTCACTCAT+TGG - chr7.2:23639469-23639488 MS.gene54960:CDS 50.0%
ATCTTATCCACCGCTGGTGG+TGG + chr7.2:23638790-23638809 None:intergenic 55.0%
CTGATCTTATCCACCGCTGG+TGG + chr7.2:23638793-23638812 None:intergenic 55.0%
CTGCTGATCTTATCCACCGC+TGG + chr7.2:23638796-23638815 None:intergenic 55.0%
GCTTGTGGCAACTGCCTCTT+TGG + chr7.2:23638863-23638882 None:intergenic 55.0%
GGAGGCCATCAACACTGATG+TGG + chr7.2:23639158-23639177 None:intergenic 55.0%
GTGGCAACTGCCTCTTTGGT+AGG + chr7.2:23638859-23638878 None:intergenic 55.0%
!! AGAAGCACCACCACCACCAG+CGG - chr7.2:23638777-23638796 MS.gene54960:CDS 60.0%
!! TTATCCACCGCTGGTGGTGG+TGG + chr7.2:23638787-23638806 None:intergenic 60.0%
AGCACCACCACCACCAGCGG+TGG - chr7.2:23638780-23638799 MS.gene54960:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 23638751 23640038 23638751 ID=MS.gene54960
chr7.2 mRNA 23638751 23640038 23638751 ID=MS.gene54960.t1;Parent=MS.gene54960
chr7.2 exon 23639202 23640038 23639202 ID=MS.gene54960.t1.exon1;Parent=MS.gene54960.t1
chr7.2 CDS 23639202 23640038 23639202 ID=cds.MS.gene54960.t1;Parent=MS.gene54960.t1
chr7.2 exon 23638751 23638921 23638751 ID=MS.gene54960.t1.exon2;Parent=MS.gene54960.t1
chr7.2 CDS 23638751 23638921 23638751 ID=cds.MS.gene54960.t1;Parent=MS.gene54960.t1
Gene Sequence

>MS.gene54960

ATGGGGCGACGGAGGAAGAGAATTTCAGAAGCACCACCACCACCAGCGGTGGATAAGATCAGCAGCTTACCCGACGCGATTCTGAGTCAGATTCTGTCTCGTATCCCTACCAAAGAGGCAGTTGCCACAAGCATTCTCTCAAAGAGATGGATTCATCTCTGGAAATTCATCGACGGTATCGATTTCACCGACATCACACTGGATGATACTGATTCTACTTACAGTTTCAATGATTCTATGTCCTCCATTTTACTCTCTCGTGAAGCTGCTGGCTCTCTTTTCCTTAACAGATTCAACCTCCAAATTGAATACGGTAACACTGATCTTGCCTTTCATTTCGGCATTCACAATGTCAACAAATGGATTAACCTCATTGCTCAACGCAAACTCAAGTATCTTCGTCTCCACATCAGTGTTGATGGCCTCCACATCAGTGACATACCCAAATTGCCTGTTAGTATTCTCACATGTAGAACACTTGTAACTCTCGACCTCGGTTTGTTCTATGTGAAGGGTTTTGATTTTTCTTGTATTGGATTTGGATTTCCATCACTCAATGTCCTTCATCTGAATGATATGATCTTCCATGAACTTCGAGATTTTTTGTCGCTTTTAGCTGGATGTCCAATTCTTGAGCATATACGAGTGATGGATATATACTTCCATGGTGTGGAAGATTCCATTGAAGAGTTTAAAAGCTTAAGCTTACCCAAATTGACGAGTGCTGATGTCACTCATTGGTGGTCTTCATATTTTCCGGTGAAAGCACTATCTAATTTAGAGGATCTGTGTACAGATACATTCATGATTTACCCAAAAGACAGCAAAGTCTACGAGGTCCGTTTTATTTTGAATATAATGCATTGCTACCTCAGTCTATATAATATTGAAATTTCATATTGAAGGTGTGTTGGTGTCCAATATAGCACAATTGATTACATTCAATTATTCTGTTTTCTACAATTTGATTATGTGTTGGTCAATTGAATACATTCACTGATGAAATGGAATAGAATGGGATGGAAAACAAAGCAAAATTTTGATAAATCTGCAATGCCCCTTTTGTTGTTGTGAATTTTTGCCCCAATTTGATACCGTGTCTTTCTACATAATTCAGGCGAATCAGCTACCCCCTTACGATGATATGAATCAGCTACCCCCTTACGATGATATTCCCATCTTTCATAATTTGACCCACTTGGAGCTCTACAATAATTGGGATTTGGTAGCACAAGTGCTCCAATACTGCCCTAAGCTTCAAAATCTCAAACTTTGCCAGGTTTGTTAA

Protein sequence

>MS.gene54960.t1

MGRRRKRISEAPPPPAVDKISSLPDAILSQILSRIPTKEAVATSILSKRWIHLWKFIDGIDFTDITLDDTDSTYSFNDSMSSILLSREAAGSLFLNRFNLQIEYGNTDLAFHFGIHNVNKWINLIAQRKLKYLRLHISVDGLHISDIPKLPVSILTCRTLVTLDLGLFYVKGFDFSCIGFGFPSLNVLHLNDMIFHELRDFLSLLAGCPILEHIRVMDIYFHGVEDSIEEFKSLSLPKLTSADVTHWWSSYFPVKALSNLEDLCTDTFMIYPKDSKVYEANQLPPYDDMNQLPPYDDIPIFHNLTHLELYNNWDLVAQVLQYCPKLQNLKLCQVC