AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065373


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065373.t1 MTR_2g007450 52.632 342 147 7 1 340 1 329 7.81e-105 315
MS.gene065373.t1 MTR_7g083740 52.353 340 91 8 3 340 2 272 7.49e-97 293
MS.gene065373.t1 MTR_1g053025 50.462 325 134 8 17 340 1 299 8.09e-88 270
MS.gene065373.t1 MTR_3g026920 48.193 332 135 10 16 339 17 319 2.02e-76 241
MS.gene065373.t1 MTR_4g098590 46.395 319 141 8 20 338 1 289 1.35e-74 236
MS.gene065373.t1 MTR_2g007500 44.643 336 140 8 5 340 3 292 1.73e-71 226
MS.gene065373.t1 MTR_2g007400 41.573 356 163 12 5 354 3 319 3.29e-69 223
MS.gene065373.t1 MTR_3g107160 41.411 326 144 11 18 338 10 293 2.56e-64 209
MS.gene065373.t1 MTR_1g107385 40.964 332 165 7 18 347 32 334 6.83e-63 207
MS.gene065373.t1 MTR_5g083890 41.337 329 164 7 15 340 3 305 4.03e-60 202
MS.gene065373.t1 MTR_7g075820 38.527 353 174 10 15 364 3 315 5.42e-59 196
MS.gene065373.t1 MTR_3g107100 40.741 324 148 9 18 338 11 293 4.50e-56 189
MS.gene065373.t1 MTR_2g005990 40.000 330 157 10 16 340 4 297 5.08e-56 188
MS.gene065373.t1 MTR_3g107120 40.950 337 139 11 18 338 9 301 6.11e-55 186
MS.gene065373.t1 MTR_2g008320 37.243 341 145 13 16 340 50 337 9.46e-48 167
MS.gene065373.t1 MTR_3g099830 38.138 333 131 10 16 340 10 275 3.17e-47 164
MS.gene065373.t1 MTR_2g008310 37.576 330 153 11 17 340 1 283 5.02e-47 164
MS.gene065373.t1 MTR_2g007360 38.066 331 133 8 16 342 10 272 1.85e-45 160
MS.gene065373.t1 MTR_2g007530 39.051 274 123 10 16 250 17 285 4.50e-41 147
MS.gene065373.t1 MTR_2g007530 53.846 78 28 2 267 343 197 267 7.87e-14 72.0
MS.gene065373.t1 MTR_7g007340 35.542 332 138 9 12 340 4 262 4.91e-37 137
MS.gene065373.t1 MTR_7g115270 30.211 331 189 8 15 336 9 306 1.50e-29 117
MS.gene065373.t1 MTR_2g007550 44.444 180 62 6 1 177 1 145 1.73e-29 116
MS.gene065373.t1 MTR_2g007550 50.485 103 50 1 238 340 148 249 1.04e-24 103
MS.gene065373.t1 MTR_7g075800 31.124 347 186 14 15 341 6 319 4.08e-28 116
MS.gene065373.t1 MTR_6g045333 31.231 333 181 10 17 340 60 353 4.51e-28 114
MS.gene065373.t1 MTR_1g041245 29.970 337 173 12 15 340 8 292 2.20e-27 111
MS.gene065373.t1 MTR_3g105060 29.969 327 172 9 15 336 11 285 6.38e-27 110
MS.gene065373.t1 MTR_8g085430 33.913 230 118 7 15 237 8 210 7.72e-27 109
MS.gene065373.t1 MTR_5g073420 31.657 338 168 15 8 336 1 284 1.12e-25 107
MS.gene065373.t1 MTR_7g032380 29.358 327 160 11 15 340 8 264 1.30e-25 106
MS.gene065373.t1 MTR_7g007370 32.615 325 129 11 17 340 16 251 1.35e-25 105
MS.gene065373.t1 MTR_3g082890 30.748 361 183 11 1 341 1 314 3.75e-24 103
MS.gene065373.t1 MTR_3g082890 30.833 360 182 11 1 340 81 393 1.75e-23 101
MS.gene065373.t1 MTR_3g040700 30.514 331 162 14 17 338 42 313 2.66e-23 100
MS.gene065373.t1 MTR_7g034115 30.994 342 162 14 15 340 8 291 4.46e-23 99.4
MS.gene065373.t1 MTR_1089s0010 28.045 353 201 10 17 364 7 311 7.33e-23 99.0
MS.gene065373.t1 MTR_7g098480 31.378 341 172 13 3 336 8 293 1.02e-22 99.4
MS.gene065373.t1 MTR_7g026500 29.912 341 196 13 6 340 2 305 1.12e-22 98.6
MS.gene065373.t1 MTR_5g082930 53.398 103 45 2 20 120 17 118 2.07e-22 94.4
MS.gene065373.t1 MTR_3g071850 29.552 335 184 10 17 340 23 316 3.42e-22 98.6
MS.gene065373.t1 MTR_7g098510 32.174 345 170 17 3 338 8 297 6.29e-22 96.3
MS.gene065373.t1 MTR_7g033990 27.353 340 190 11 16 349 9 297 3.85e-21 94.4
MS.gene065373.t1 MTR_7g056430 30.091 329 157 11 18 340 9 270 4.21e-21 95.5
MS.gene065373.t1 MTR_5g008950 30.088 339 153 15 20 340 1 273 4.46e-21 93.6
MS.gene065373.t1 MTR_7g056420 30.091 329 157 11 18 340 9 270 6.41e-21 95.1
MS.gene065373.t1 MTR_3g467400 29.275 345 187 16 17 340 2 310 8.01e-21 92.8
MS.gene065373.t1 MTR_7g098570 29.143 350 175 15 1 336 7 297 1.12e-20 93.6
MS.gene065373.t1 MTR_1g108820 29.428 367 192 16 15 364 5 321 2.09e-20 92.0
MS.gene065373.t1 MTR_7g032370 28.616 318 155 11 33 340 5 260 2.12e-20 91.7
MS.gene065373.t1 MTR_5g058000 29.167 336 169 12 17 340 7 285 2.60e-20 91.7
MS.gene065373.t1 MTR_7g007080 28.324 346 170 13 18 343 4 291 2.65e-20 91.7
MS.gene065373.t1 MTR_3g036250 30.357 336 164 14 17 342 4 279 3.11e-20 91.3
MS.gene065373.t1 MTR_1g108820 30.814 344 172 16 15 341 5 299 3.85e-20 90.9
MS.gene065373.t1 MTR_3g107140 32.569 218 114 7 27 236 1 193 5.17e-20 87.4
MS.gene065373.t1 MTR_3g108150 28.729 362 171 14 13 349 4 303 5.82e-20 90.5
MS.gene065373.t1 MTR_7g056433 29.851 335 182 12 12 338 6 295 7.17e-20 90.5
MS.gene065373.t1 MTR_5g045170 29.032 341 172 13 17 340 13 300 1.74e-19 89.4
MS.gene065373.t1 MTR_5g073340 31.098 328 154 13 17 338 7 268 2.83e-19 87.8
MS.gene065373.t1 MTR_5g058100 28.182 330 190 9 16 340 7 294 1.09e-18 87.0
MS.gene065373.t1 MTR_2g007460 41.322 121 50 3 16 136 10 109 1.23e-18 80.9
MS.gene065373.t1 MTR_6g022360 29.722 360 183 12 17 364 42 343 1.82e-18 86.7
MS.gene065373.t1 MTR_7g055943 30.120 332 181 10 16 340 38 325 1.96e-18 86.7
MS.gene065373.t1 MTR_7g056447 32.857 210 110 7 15 223 6 185 2.65e-18 84.7
MS.gene065373.t1 MTR_5g045510 28.713 303 173 11 14 316 8 267 2.87e-18 85.5
MS.gene065373.t1 MTR_1g085120 28.144 334 187 11 18 341 179 469 3.60e-18 85.9
MS.gene065373.t1 MTR_7g034090 37.791 172 79 4 16 183 2 149 3.62e-18 85.9
MS.gene065373.t1 MTR_1g066830 27.607 326 193 11 14 334 4 291 4.27e-18 85.1
MS.gene065373.t1 MTR_1g085120 28.228 333 186 11 18 340 92 381 4.71e-18 85.5
MS.gene065373.t1 MTR_4g134150 29.151 271 136 9 15 281 11 229 5.33e-18 82.4
MS.gene065373.t1 MTR_1g085120 28.228 333 186 11 18 340 167 456 9.05e-18 85.1
MS.gene065373.t1 MTR_6g011460 28.182 330 185 12 17 340 45 328 1.41e-17 84.0
MS.gene065373.t1 MTR_3g023630 27.439 328 176 11 17 335 7 281 1.41e-17 83.6
MS.gene065373.t1 MTR_5g031970 26.706 337 151 11 17 341 15 267 1.50e-17 83.2
MS.gene065373.t1 MTR_8g445780 26.611 357 198 13 18 336 13 343 1.52e-17 83.6
MS.gene065373.t1 MTR_6g040270 28.221 326 183 10 20 340 10 289 2.22e-17 83.2
MS.gene065373.t1 MTR_5g061680 26.994 326 165 9 16 336 9 266 3.18e-17 82.0
MS.gene065373.t1 MTR_5g073370 29.268 328 183 11 18 340 5 288 4.04e-17 82.4
MS.gene065373.t1 MTR_7g088260 28.134 359 195 14 18 364 91 398 6.43e-17 82.0
MS.gene065373.t1 MTR_0543s0010 26.923 364 176 13 3 348 75 366 7.49e-17 82.0
MS.gene065373.t1 MTR_0492s0020 26.923 364 176 13 3 348 75 366 8.65e-17 81.6
MS.gene065373.t1 MTR_6g022500 26.807 332 190 12 17 340 100 386 2.23e-16 80.5
MS.gene065373.t1 MTR_8g077460 29.060 351 184 14 18 358 10 305 2.49e-16 79.7
MS.gene065373.t1 MTR_7g056280 34.021 194 105 7 20 213 8 178 5.81e-16 79.7
MS.gene065373.t1 MTR_5g008920 27.410 332 183 11 16 340 10 290 6.01e-16 79.0
MS.gene065373.t1 MTR_6g013160 26.913 379 202 12 11 341 2 353 8.63e-16 78.6
MS.gene065373.t1 MTR_7g056287 27.523 327 181 11 18 338 3 279 9.29e-16 78.2
MS.gene065373.t1 MTR_5g007410 28.829 333 182 14 20 340 28 317 1.13e-15 78.6
MS.gene065373.t1 MTR_5g039450 27.586 348 155 14 17 340 5 279 2.32e-15 77.0
MS.gene065373.t1 MTR_7g056277 27.385 325 180 11 18 336 259 533 2.84e-15 77.4
MS.gene065373.t1 MTR_5g084070 25.197 381 201 12 1 341 1 337 3.49e-15 77.0
MS.gene065373.t1 MTR_7g033470 37.607 117 68 2 8 120 4 119 3.81e-15 72.4
MS.gene065373.t1 MTR_7g034110 24.926 337 165 10 15 349 8 258 5.12e-15 75.9
MS.gene065373.t1 MTR_2g036470 28.070 342 191 12 16 346 12 309 5.80e-15 75.9
MS.gene065373.t1 MTR_4g039440 28.487 337 178 13 17 340 33 319 8.22e-15 75.5
MS.gene065373.t1 MTR_1g492880 47.727 88 42 2 18 105 6 89 8.47e-15 70.1
MS.gene065373.t1 MTR_8g062080 32.510 243 124 13 1 234 6 217 8.62e-15 75.9
MS.gene065373.t1 MTR_8g062010 31.579 228 114 10 1 223 1 191 8.77e-15 75.5
MS.gene065373.t1 MTR_1g492880 47.727 88 42 2 18 105 6 89 8.78e-15 69.7
MS.gene065373.t1 MTR_6g044560 28.485 330 187 9 16 336 176 465 9.75e-15 75.9
MS.gene065373.t1 MTR_8g062310 27.391 230 131 7 4 231 11 206 1.71e-14 74.7
MS.gene065373.t1 MTR_1g013560 28.326 233 142 8 1 230 1 211 2.31e-14 73.9
MS.gene065373.t1 MTR_6g044572 28.267 329 187 9 17 336 1 289 3.55e-14 73.6
MS.gene065373.t1 MTR_8g468760 28.899 218 130 8 16 227 7 205 3.59e-14 73.6
MS.gene065373.t1 MTR_1g013560 28.326 233 142 8 1 230 1 211 4.16e-14 73.6
MS.gene065373.t1 MTR_8g058970 29.508 244 132 10 5 228 6 229 4.26e-14 73.6
MS.gene065373.t1 MTR_7g114710 27.027 333 161 13 15 338 10 269 1.05e-13 72.0
MS.gene065373.t1 MTR_5g039490 27.465 284 166 10 2 280 6 254 1.33e-13 71.6
MS.gene065373.t1 MTR_1g014450 28.972 214 131 7 18 230 16 209 1.35e-13 72.0
MS.gene065373.t1 MTR_2g091145 27.391 230 145 7 1 228 3 212 1.75e-13 71.6
MS.gene065373.t1 MTR_8g058965 31.696 224 119 9 16 225 11 214 3.13e-13 70.9
MS.gene065373.t1 MTR_3g048290 28.870 239 146 5 17 254 22 237 3.40e-13 70.9
MS.gene065373.t1 MTR_7g060470 26.822 343 179 13 18 336 3 297 4.31e-13 70.5
MS.gene065373.t1 MTR_2g082800 31.915 141 82 4 1 138 9 138 4.91e-13 70.1
MS.gene065373.t1 MTR_3g110010 30.000 210 112 5 18 225 13 189 5.53e-13 70.9
MS.gene065373.t1 MTR_6g029350 38.583 127 58 3 214 340 1 107 6.02e-13 68.2
MS.gene065373.t1 MTR_3g109982 29.717 212 114 5 18 227 13 191 8.83e-13 70.1
MS.gene065373.t1 MTR_7g090750 33.019 212 121 6 17 228 10 200 1.40e-12 68.9
MS.gene065373.t1 MTR_2g047858 28.509 228 138 7 5 230 101 305 2.03e-12 68.6
MS.gene065373.t1 MTR_5g039950 26.361 349 182 12 18 336 23 326 2.52e-12 68.2
MS.gene065373.t1 MTR_0009s0080 26.946 334 186 12 20 340 20 308 4.76e-12 67.4
MS.gene065373.t1 MTR_3g114200 30.688 189 89 6 1 179 1 157 5.86e-12 63.5
MS.gene065373.t1 MTR_2g008300 54.412 68 29 1 169 236 4 69 6.28e-12 60.8
MS.gene065373.t1 MTR_8g467800 30.303 231 134 9 2 230 3 208 6.91e-12 66.2
MS.gene065373.t1 MTR_4g032730 28.571 224 130 8 17 232 14 215 7.28e-12 67.0
MS.gene065373.t1 MTR_3g113782 45.349 86 38 3 1 78 1 85 1.12e-11 60.8
MS.gene065373.t1 MTR_4g080773 25.000 392 188 14 18 338 19 375 1.27e-11 66.2
MS.gene065373.t1 MTR_8g467800 30.303 231 134 9 2 230 3 208 1.52e-11 65.9
MS.gene065373.t1 MTR_4g080773 25.000 392 188 14 18 338 19 375 1.55e-11 65.9
MS.gene065373.t1 MTR_2g082860 49.206 63 31 1 1 62 9 71 1.58e-11 61.6
MS.gene065373.t1 MTR_2g082880 30.894 123 71 2 18 138 10 120 1.63e-11 65.5
MS.gene065373.t1 MTR_2g082850 32.432 148 72 6 1 138 9 138 1.83e-11 65.1
MS.gene065373.t1 MTR_8g062270 25.000 228 145 7 16 238 14 220 2.02e-11 65.5
MS.gene065373.t1 MTR_2g007100 47.368 76 35 2 17 87 1 76 2.94e-11 59.3
MS.gene065373.t1 MTR_5g076150 31.000 200 102 9 154 334 18 200 3.35e-11 63.2
MS.gene065373.t1 MTR_8g469020 29.018 224 131 8 14 225 3 210 4.27e-11 64.3
MS.gene065373.t1 MTR_1g013580 26.724 232 147 7 1 230 1 211 5.91e-11 63.9
MS.gene065373.t1 MTR_4g050250 27.132 258 142 8 5 244 8 237 9.56e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065373.t1 AT1G78750 29.517 393 190 17 2 336 3 366 8.38e-25 105
MS.gene065373.t1 AT1G78750 29.517 393 190 17 2 336 3 366 8.38e-25 105
MS.gene065373.t1 AT1G16930 27.568 370 185 11 18 336 15 352 1.48e-24 104
MS.gene065373.t1 AT1G16930 27.568 370 185 11 18 336 15 352 1.48e-24 104
MS.gene065373.t1 AT1G16930 27.568 370 185 11 18 336 15 352 1.48e-24 104
MS.gene065373.t1 AT4G13985 28.312 385 204 14 4 338 5 367 2.30e-23 101
MS.gene065373.t1 AT3G60040 29.452 292 148 10 18 278 13 277 5.04e-19 89.0
MS.gene065373.t1 AT3G60040 26.613 372 197 13 18 336 232 580 8.18e-19 88.6
MS.gene065373.t1 AT3G60040 26.613 372 197 13 18 336 233 581 8.73e-19 88.6
MS.gene065373.t1 AT3G52680 26.404 356 201 13 18 342 21 346 9.63e-19 87.0
MS.gene065373.t1 AT3G60040 29.452 292 148 10 18 278 230 494 1.08e-18 88.2
MS.gene065373.t1 AT3G60040 29.452 292 148 10 18 278 232 496 1.16e-18 87.8
MS.gene065373.t1 AT4G00160 27.762 353 194 12 18 338 16 339 1.49e-18 87.0
MS.gene065373.t1 AT3G58860 26.923 364 198 13 17 338 6 343 1.92e-18 86.7
MS.gene065373.t1 AT1G69630 28.244 393 191 16 1 336 1 359 2.00e-18 86.7
MS.gene065373.t1 AT3G26922 33.175 211 110 6 18 227 14 194 2.01e-18 85.1
MS.gene065373.t1 AT3G26922 33.175 211 110 6 18 227 14 194 2.01e-18 85.1
MS.gene065373.t1 AT4G14103 28.165 387 182 14 18 343 8 359 2.24e-18 86.7
MS.gene065373.t1 AT3G52680 26.705 352 197 13 18 338 21 342 2.42e-18 86.7
MS.gene065373.t1 AT4G14103 27.704 379 180 13 18 336 8 352 5.35e-18 85.1
MS.gene065373.t1 AT4G14103 27.704 379 180 13 18 336 8 352 5.35e-18 85.1
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 1.55e-17 82.8
MS.gene065373.t1 AT3G58940 26.087 368 191 15 17 336 1 335 1.95e-17 84.3
MS.gene065373.t1 AT3G58940 26.087 368 191 15 17 336 1 335 1.95e-17 84.3
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 2.41e-17 82.8
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 2.41e-17 82.8
MS.gene065373.t1 AT4G26340 27.762 353 193 12 17 338 1 322 3.15e-17 82.8
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 3.32e-17 82.8
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 3.32e-17 82.8
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 3.32e-17 82.8
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 3.32e-17 82.8
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 21 211 3.46e-17 82.8
MS.gene065373.t1 AT1G51370 24.936 389 200 14 2 345 4 345 3.68e-17 82.0
MS.gene065373.t1 AT1G51370 25.130 386 197 14 2 342 4 342 4.27e-17 82.4
MS.gene065373.t1 AT1G06630 33.962 212 115 7 18 225 12 202 4.54e-17 82.8
MS.gene065373.t1 AT3G59190 25.743 404 202 14 18 354 12 384 5.12e-17 82.0
MS.gene065373.t1 AT1G51370 24.936 393 203 14 2 349 4 349 5.40e-17 82.4
MS.gene065373.t1 AT3G59200 25.575 391 193 15 18 341 7 366 1.38e-16 81.3
MS.gene065373.t1 AT3G59200 25.773 388 190 15 18 338 7 363 2.08e-16 80.1
MS.gene065373.t1 AT2G26860 31.132 212 121 6 17 227 1 188 2.31e-16 80.1
MS.gene065373.t1 AT2G26860 31.132 212 121 6 17 227 1 188 2.31e-16 80.1
MS.gene065373.t1 AT3G42770 31.250 224 123 6 20 233 1 203 4.58e-16 79.7
MS.gene065373.t1 AT1G13780 30.196 255 133 12 10 251 2 224 6.27e-16 78.2
MS.gene065373.t1 AT1G13780 29.921 254 135 11 10 251 2 224 8.06e-16 79.0
MS.gene065373.t1 AT3G58880 26.357 387 195 13 17 344 2 357 1.25e-15 78.2
MS.gene065373.t1 AT5G22720 28.194 227 132 6 18 243 23 219 1.32e-15 78.2
MS.gene065373.t1 AT5G22660 25.789 380 186 13 18 338 13 355 1.36e-15 78.2
MS.gene065373.t1 AT3G59190 25.907 386 189 13 18 336 12 367 1.68e-15 78.2
MS.gene065373.t1 AT3G44060 31.604 212 122 4 20 231 1 189 2.76e-15 77.0
MS.gene065373.t1 AT1G66290 26.000 400 195 16 2 338 5 366 3.79e-15 77.0
MS.gene065373.t1 AT4G14096 26.703 367 192 13 18 336 8 345 4.29e-15 76.6
MS.gene065373.t1 AT4G14096 26.703 367 192 13 18 336 8 345 4.29e-15 76.6
MS.gene065373.t1 AT5G56440 29.907 214 113 4 17 225 1 182 8.63e-15 75.9
MS.gene065373.t1 AT5G22660 30.415 217 108 7 18 228 13 192 9.45e-15 74.7
MS.gene065373.t1 AT3G59210 30.137 219 124 6 18 232 7 200 1.02e-14 75.5
MS.gene065373.t1 AT3G59210 30.137 219 124 6 18 232 7 200 1.02e-14 75.5
MS.gene065373.t1 AT3G59210 30.137 219 124 6 18 232 7 200 1.02e-14 75.5
MS.gene065373.t1 AT3G59210 30.137 219 124 6 18 232 7 200 1.02e-14 75.5
MS.gene065373.t1 AT3G59210 30.137 219 124 6 18 232 7 200 1.02e-14 75.5
MS.gene065373.t1 AT4G26350 28.326 233 132 7 17 247 1 200 1.64e-14 74.7
MS.gene065373.t1 AT1G78760 29.588 267 129 12 4 261 8 224 1.99e-14 74.7
MS.gene065373.t1 AT5G53840 27.124 306 178 10 18 314 18 287 2.19e-14 74.7
MS.gene065373.t1 AT4G13965 31.163 215 107 6 18 227 10 188 2.20e-14 74.3
MS.gene065373.t1 AT1G66300 23.308 399 207 15 2 336 5 368 5.47e-14 73.2
MS.gene065373.t1 AT1G66320 24.397 373 185 15 23 336 35 369 8.18e-14 72.8
MS.gene065373.t1 AT5G56370 24.928 349 211 9 17 343 1 320 1.12e-13 71.6
MS.gene065373.t1 AT3G59160 29.614 233 115 7 18 225 13 221 1.49e-13 72.0
MS.gene065373.t1 AT5G25850 28.879 232 123 9 1 227 2 196 1.57e-13 72.0
MS.gene065373.t1 AT3G58900 25.065 383 197 14 17 336 1 356 1.59e-13 72.0
MS.gene065373.t1 AT5G44950 29.858 211 120 7 18 228 4 186 2.32e-13 71.2
MS.gene065373.t1 AT5G41630 30.435 230 137 8 18 242 12 223 2.46e-13 71.2
MS.gene065373.t1 AT3G44810 33.023 215 112 11 20 227 9 198 3.95e-13 70.9
MS.gene065373.t1 AT5G22700 27.300 337 194 11 18 338 43 344 4.43e-13 70.5
MS.gene065373.t1 AT3G51530 28.879 232 128 9 9 238 21 217 5.09e-13 70.5
MS.gene065373.t1 AT5G56370 30.435 207 115 4 17 223 1 178 5.17e-13 70.1
MS.gene065373.t1 AT5G56370 30.435 207 115 4 17 223 1 178 5.17e-13 70.1
MS.gene065373.t1 AT5G22610 24.928 349 209 10 18 338 18 341 7.79e-13 69.7
MS.gene065373.t1 AT1G66310 22.857 420 216 11 5 366 6 375 8.04e-13 69.7
MS.gene065373.t1 AT4G10400 31.111 225 113 9 17 234 1 190 9.06e-13 69.3
MS.gene065373.t1 AT4G10400 31.111 225 113 9 17 234 1 190 9.06e-13 69.3
MS.gene065373.t1 AT4G10400 31.111 225 113 9 17 234 1 190 9.06e-13 69.3
MS.gene065373.t1 AT1G48400 32.227 211 115 7 18 225 10 195 9.35e-13 69.7
MS.gene065373.t1 AT1G48400 32.227 211 115 7 18 225 10 195 1.26e-12 69.3
MS.gene065373.t1 AT5G22700 29.302 215 117 5 18 230 43 224 1.41e-12 68.9
MS.gene065373.t1 AT5G60610 29.108 213 115 6 17 227 1 179 1.42e-12 68.9
MS.gene065373.t1 AT5G60610 29.108 213 115 6 17 227 1 179 1.42e-12 68.9
MS.gene065373.t1 AT5G22670 32.075 212 109 7 18 227 11 189 1.42e-12 68.9
MS.gene065373.t1 AT5G56410 30.137 219 129 5 17 227 1 203 1.46e-12 68.9
MS.gene065373.t1 AT3G58930 23.678 397 195 17 17 336 1 366 1.50e-12 68.9
MS.gene065373.t1 AT3G58930 23.678 397 195 17 17 336 1 366 1.50e-12 68.9
MS.gene065373.t1 AT3G58930 23.678 397 195 17 17 336 1 366 1.50e-12 68.9
MS.gene065373.t1 AT5G22700 29.302 215 117 5 18 230 6 187 1.64e-12 68.9
MS.gene065373.t1 AT5G22700 29.302 215 117 5 18 230 6 187 1.64e-12 68.9
MS.gene065373.t1 AT5G22700 29.302 215 117 5 18 230 6 187 1.64e-12 68.9
MS.gene065373.t1 AT5G22700 29.302 215 117 5 18 230 6 187 1.64e-12 68.9
MS.gene065373.t1 AT3G59170 26.161 409 183 15 18 336 7 386 2.67e-12 68.2
MS.gene065373.t1 AT1G78840 25.401 374 178 15 23 339 11 340 3.13e-12 67.8
MS.gene065373.t1 AT1G78840 25.401 374 178 15 23 339 11 340 3.13e-12 67.8
MS.gene065373.t1 AT5G41840 28.139 231 135 7 18 238 14 223 3.16e-12 68.2
MS.gene065373.t1 AT3G59000 29.310 232 136 8 17 233 1 219 3.74e-12 67.4
MS.gene065373.t1 AT5G18780 27.119 236 139 5 18 252 11 214 4.85e-12 67.0
MS.gene065373.t1 AT5G18780 27.119 236 139 5 18 252 11 214 4.85e-12 67.0
MS.gene065373.t1 AT3G44080 31.863 204 109 7 10 209 2 179 7.42e-12 66.6
MS.gene065373.t1 AT4G27050 30.045 223 118 8 17 225 3 201 7.48e-12 66.6
MS.gene065373.t1 AT4G27050 30.045 223 118 8 17 225 3 201 7.48e-12 66.6
MS.gene065373.t1 AT4G27050 30.045 223 118 8 17 225 3 201 7.48e-12 66.6
MS.gene065373.t1 AT4G27050 30.045 223 118 8 17 225 3 201 7.48e-12 66.6
MS.gene065373.t1 AT4G27050 30.045 223 118 8 17 225 3 201 7.48e-12 66.6
MS.gene065373.t1 AT5G18780 26.582 237 139 6 18 252 11 214 7.61e-12 66.6
MS.gene065373.t1 AT5G18780 26.582 237 139 6 18 252 11 214 7.61e-12 66.6
MS.gene065373.t1 AT5G53640 28.340 247 122 11 4 237 3 207 8.60e-12 64.7
MS.gene065373.t1 AT3G58900 29.259 270 147 10 17 282 1 230 8.86e-12 65.9
MS.gene065373.t1 AT3G58900 29.259 270 147 10 17 282 1 230 9.67e-12 65.9
MS.gene065373.t1 AT3G58900 29.259 270 147 10 17 282 1 230 9.67e-12 65.9
MS.gene065373.t1 AT1G80470 29.075 227 115 9 18 235 15 204 1.03e-11 66.2
MS.gene065373.t1 AT4G09920 30.137 219 112 8 17 228 1 185 1.10e-11 65.5
MS.gene065373.t1 AT4G09920 30.137 219 112 8 17 228 1 185 1.10e-11 65.5
MS.gene065373.t1 AT4G09920 28.631 241 131 8 17 250 1 207 1.17e-11 65.1
MS.gene065373.t1 AT4G09920 28.631 241 131 8 17 250 1 207 1.17e-11 65.1
MS.gene065373.t1 AT4G09920 28.631 241 131 8 17 250 1 207 1.17e-11 65.1
MS.gene065373.t1 AT3G58960 24.869 382 192 15 17 336 1 349 1.38e-11 66.2
MS.gene065373.t1 AT2G29910 28.968 252 121 10 18 257 29 234 3.33e-11 64.7
MS.gene065373.t1 AT5G56560 28.169 213 119 7 19 229 6 186 3.55e-11 64.7
MS.gene065373.t1 AT2G29910 28.968 252 121 10 18 257 5 210 3.58e-11 64.3
MS.gene065373.t1 AT2G29910 28.968 252 121 10 18 257 5 210 3.58e-11 64.3
MS.gene065373.t1 AT2G29910 28.968 252 121 10 18 257 5 210 3.58e-11 64.3
MS.gene065373.t1 AT2G29910 28.968 252 121 10 18 257 5 210 3.58e-11 64.3
MS.gene065373.t1 AT2G29910 28.968 252 121 10 18 257 5 210 3.63e-11 64.3
MS.gene065373.t1 AT2G29910 28.968 252 121 10 18 257 5 210 3.63e-11 64.3
MS.gene065373.t1 AT1G60400 23.971 413 219 15 16 365 12 392 3.65e-11 64.7
MS.gene065373.t1 AT5G02930 29.778 225 119 8 1 225 14 199 4.63e-11 64.3
MS.gene065373.t1 AT5G56560 26.609 233 137 7 19 249 6 206 4.83e-11 64.7
MS.gene065373.t1 AT3G49040 29.767 215 115 7 18 227 17 200 5.58e-11 63.5
MS.gene065373.t1 AT3G49020 30.332 211 115 7 18 227 22 201 6.88e-11 63.9
MS.gene065373.t1 AT3G58920 27.928 222 129 8 17 230 1 199 8.38e-11 63.5
MS.gene065373.t1 AT1G32375 24.309 362 212 13 17 344 1 334 8.82e-11 63.5
MS.gene065373.t1 AT1G32375 24.309 362 212 13 17 344 1 334 8.82e-11 63.5

Find 79 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATGTGCACTAATCAATT+TGG 0.235682 7.1:+21263329 None:intergenic
GAGAATACCAACAGGCAATT+TGG 0.253860 7.1:+21263611 None:intergenic
TGAGTCTATATACTCGATTT+TGG 0.293100 7.1:-21263847 MS.gene065373:CDS
GATTCTTCTTCTATTAGATT+TGG 0.302275 7.1:-21263534 MS.gene065373:CDS
GCTTGTGGCAACTGCCTCTT+TGG 0.307775 7.1:+21263971 None:intergenic
TTTAGTCTCGAAATTGAATA+TGG 0.325057 7.1:-21263786 MS.gene065373:CDS
TCTTCTATTAGATTTGGATT+TGG 0.328909 7.1:-21263528 MS.gene065373:CDS
ATCACTCAATGTCCTTCATT+TGG 0.329833 7.1:-21263499 MS.gene065373:CDS
TATGATCTAGCCTTACGTTT+TGG 0.357736 7.1:-21263759 MS.gene065373:CDS
ACTCGTAGATGCTCAAGATT+TGG 0.374943 7.1:+21263423 None:intergenic
GGATAAGATCAGCAGTTTAC+CGG 0.376662 7.1:-21264030 MS.gene065373:CDS
GATTGGAGCTTTACGATGAT+TGG 0.378888 7.1:-21262856 MS.gene065373:CDS
CGGGACAAATTATGAAAGAT+AGG 0.382552 7.1:+21262878 None:intergenic
AAAAGATCACAAATTCTTCC+AGG 0.388189 7.1:-21263220 MS.gene065373:intron
AGAATACCAACAGGCAATTT+GGG 0.388460 7.1:+21263612 None:intergenic
AGTTCGAGATGTTGAAGCTT+AGG 0.389430 7.1:+21262803 None:intergenic
CAAAGAGATGGACTCATCTC+TGG 0.406201 7.1:-21263941 MS.gene065373:CDS
TTGGTCTCTCGCGACGCCGC+TGG 0.413220 7.1:-21263828 MS.gene065373:CDS
CTTTCATAATTTGTCCCGAT+TGG 0.417482 7.1:-21262873 MS.gene065373:CDS
ATATGTGCACTAATCAATTT+GGG 0.422506 7.1:+21263330 None:intergenic
GCATTCACAACGTCAACAAA+TGG 0.428875 7.1:-21263737 MS.gene065373:CDS
GTGGCAACTGCCTCTTTGGT+AGG 0.428995 7.1:+21263975 None:intergenic
ATTGGAGCTTTACGATGATT+GGG 0.449702 7.1:-21262855 MS.gene065373:CDS
GTTCGAGATGTTGAAGCTTA+GGG 0.452873 7.1:+21262804 None:intergenic
ATCAAGGTTCATCCATTGTA+CGG 0.465478 7.1:-21262206 MS.gene065373:CDS
TCAACATCTCGAACTTTACA+AGG 0.468919 7.1:-21262795 MS.gene065373:intron
CTTGAGCATCTACGAGTTGT+GGG 0.478913 7.1:-21263417 MS.gene065373:CDS
ATCTTATCCACCGCTGGTGG+TGG 0.483228 7.1:+21264044 None:intergenic
TGGCAACTGCCTCTTTGGTA+GGG 0.485980 7.1:+21263976 None:intergenic
AGACTTGATTGCACAGCCAC+AGG 0.489740 7.1:-21262164 MS.gene065373:CDS
GTTGAAGCTTAGGGCAGTGT+TGG 0.492971 7.1:+21262813 None:intergenic
AATCATCGTAAAGCTCCAAT+CGG 0.505933 7.1:+21262858 None:intergenic
TTATCCACCGCTGGTGGTGG+TGG 0.512107 7.1:+21264047 None:intergenic
TACCGGACGCGATTCTGAGC+GGG 0.516154 7.1:-21264013 MS.gene065373:CDS
TCTTGAGCATCTACGAGTTG+TGG 0.523909 7.1:-21263418 MS.gene065373:CDS
CAGGGCAGAGGCGTGTATGA+AGG 0.527197 7.1:-21262145 None:intergenic
GCGGATCTACTTCCTCATCA+TGG 0.529242 7.1:+21263385 None:intergenic
ACCGACGGTATCAACTTCTC+CGG 0.535091 7.1:-21263912 MS.gene065373:CDS
ATCATCGTAAAGCTCCAATC+GGG 0.537395 7.1:+21262859 None:intergenic
AGATCACATTGTCCAAATGA+AGG 0.538608 7.1:+21263487 None:intergenic
CAAGGAACCAACCGAGGTCG+AGG 0.544035 7.1:+21263568 None:intergenic
ATCCCGCTCAGAATCGCGTC+CGG 0.546632 7.1:+21264011 None:intergenic
CTGCTGATCTTATCCACCGC+TGG 0.548082 7.1:+21264038 None:intergenic
GTTGTGAATGCCAAAACGTA+AGG 0.555391 7.1:+21263749 None:intergenic
ATTGCACAGCCACAGGGCAG+AGG 0.558750 7.1:-21262157 MS.gene065373:CDS
CAAGCATTCTCTCAAAGAGA+TGG 0.559752 7.1:-21263953 MS.gene065373:CDS
GGCATACCCAAATTGCCTGT+TGG 0.566943 7.1:-21263618 MS.gene065373:CDS
TCAAGGTTCATCCATTGTAC+GGG 0.571360 7.1:-21262205 MS.gene065373:CDS
AAGAAGAAATGGGGCGACGG+AGG 0.571428 7.1:-21264088 None:intergenic
GGGCAGTGTTGGAGCACTTG+CGG 0.573680 7.1:+21262824 None:intergenic
TTAAACTCTTGAATGAATAG+CGG 0.574225 7.1:+21263366 None:intergenic
AACAAGAAGAAATGGGGCGA+CGG 0.574256 7.1:-21264091 None:intergenic
AGATAGGAATATCATCATAA+CGG 0.578013 7.1:+21262894 None:intergenic
GTACATGTGAGAATACCAAC+AGG 0.579568 7.1:+21263603 None:intergenic
AAATTAGATAGTGCTTTCAA+CGG 0.589096 7.1:+21263279 None:intergenic
GCTTTACGATGATTGGGAGG+TGG 0.590171 7.1:-21262849 MS.gene065373:CDS
GTCTCGTCTCCCTACCAAAG+AGG 0.593043 7.1:-21263985 MS.gene065373:CDS
TTGTAAGCCTCGACCTCGGT+TGG 0.593890 7.1:-21263575 MS.gene065373:CDS
AAATGAAGGACATTGAGTGA+TGG 0.599122 7.1:+21263501 None:intergenic
TCTCTTTGAGAGAATGCTTG+TGG 0.599916 7.1:+21263956 None:intergenic
AGCACCACCACCACCAGCGG+TGG 0.617768 7.1:-21264051 MS.gene065373:CDS
GACTTGATTGCACAGCCACA+GGG 0.622709 7.1:-21262163 MS.gene065373:CDS
GTTATTCACTGTGATGATGC+CGG 0.628120 7.1:+21263893 None:intergenic
CTAATAGAAGAAGAATCGAA+AGG 0.629105 7.1:+21263540 None:intergenic
AAGAATCGAAAGGCTTCACA+AGG 0.633081 7.1:+21263550 None:intergenic
AGAAGCACCACCACCACCAG+CGG 0.633130 7.1:-21264054 MS.gene065373:CDS
GCATACATGTGCCCGTACAA+TGG 0.635239 7.1:+21262194 None:intergenic
CAAGGCTATTCACACTGACG+TGG 0.636781 7.1:+21263673 None:intergenic
GCCGGAGAAGTTGATACCGT+CGG 0.639653 7.1:+21263911 None:intergenic
CTGATCTTATCCACCGCTGG+TGG 0.645294 7.1:+21264041 None:intergenic
TATCTAATTTGAAGTCTCTG+AGG 0.648071 7.1:-21263266 MS.gene065373:CDS
GGAGCTTTACGATGATTGGG+AGG 0.649670 7.1:-21262852 MS.gene065373:CDS
CATCTCTGGAAATTTACCGA+CGG 0.653189 7.1:-21263927 MS.gene065373:CDS
ATCGATGAAATGAGAGCCAG+CGG 0.657046 7.1:+21263812 None:intergenic
GGGTATATACTTCCATGATG+AGG 0.659733 7.1:-21263397 MS.gene065373:CDS
GCTTCACAAGGAACCAACCG+AGG 0.686050 7.1:+21263562 None:intergenic
TCATACACGCCTCTGCCCTG+TGG 0.686102 7.1:+21262148 None:intergenic
ACACTTGTAAGCCTCGACCT+CGG 0.696576 7.1:-21263579 MS.gene065373:CDS
TTACCGGACGCGATTCTGAG+CGG 0.700251 7.1:-21264014 MS.gene065373:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATATAAATAAAAAGTT+AGG + chr7.1:21263965-21263984 None:intergenic 10.0%
!! TGTATATAAATAAAAAGTTA+GGG + chr7.1:21263964-21263983 None:intergenic 10.0%
!! AAAAGAAAAAAGAAAAAACA+TGG + chr7.1:21263250-21263269 None:intergenic 15.0%
!! GTTATCAATAAAATAAAAGT+CGG + chr7.1:21263776-21263795 None:intergenic 15.0%
!! AAAAAGATGATGAAGAAAAT+TGG - chr7.1:21263541-21263560 MS.gene065373:CDS 20.0%
!! AAAAGATGATGAAGAAAATT+GGG - chr7.1:21263542-21263561 MS.gene065373:CDS 20.0%
!! ATAAATAAATAAAACGAACC+TGG + chr7.1:21263029-21263048 None:intergenic 20.0%
!! TAGTTATGTGCAATATTAAT+AGG - chr7.1:21263518-21263537 MS.gene065373:CDS 20.0%
!! TGTAATCAATTGTGTTATAT+TGG + chr7.1:21263102-21263121 None:intergenic 20.0%
!!! AGCAAAATATATTTTGATGA+AGG - chr7.1:21263656-21263675 MS.gene065373:CDS 20.0%
!!! GACAATTTTCTTTTGATTTT+AGG + chr7.1:21263726-21263745 None:intergenic 20.0%
! AAATTAGATAGTGCTTTCAA+CGG + chr7.1:21262952-21262971 None:intergenic 25.0%
! AAGAAAAGATAAACCGAATA+TGG + chr7.1:21263483-21263502 None:intergenic 25.0%
! AGACAGTATTATATAGATTG+AGG + chr7.1:21263075-21263094 None:intergenic 25.0%
! AGATAGGAATATCATCATAA+CGG + chr7.1:21263337-21263356 None:intergenic 25.0%
! ATATGTGCACTAATCAATTT+GGG + chr7.1:21262901-21262920 None:intergenic 25.0%
! ATCTAATTGAAGTCATAAAC+AGG + chr7.1:21264004-21264023 None:intergenic 25.0%
! ATTGCACATAACTAAAGTTA+AGG + chr7.1:21263512-21263531 None:intergenic 25.0%
! GATTCTTCTTCTATTAGATT+TGG - chr7.1:21262694-21262713 MS.gene065373:intron 25.0%
! TAAGAAGTAAGAACCATATT+CGG - chr7.1:21263467-21263486 MS.gene065373:CDS 25.0%
! TATGATCAAATTGGAGAAAA+CGG + chr7.1:21263153-21263172 None:intergenic 25.0%
! TCTTCTATTAGATTTGGATT+TGG - chr7.1:21262700-21262719 MS.gene065373:intron 25.0%
! TTAAACTCTTGAATGAATAG+CGG + chr7.1:21262865-21262884 None:intergenic 25.0%
! TTATGACTTCAATTAGATCA+AGG - chr7.1:21264006-21264025 MS.gene065373:CDS 25.0%
! TTTAGTCTCGAAATTGAATA+TGG - chr7.1:21262442-21262461 MS.gene065373:intron 25.0%
!! TTTTACAAATCATGGAAATC+TGG - chr7.1:21263685-21263704 MS.gene065373:CDS 25.0%
!!! CTGTTTTATTAGCTTCTATT+TGG - chr7.1:21263835-21263854 MS.gene065373:CDS 25.0%
AAAAGATCACAAATTCTTCC+AGG - chr7.1:21263008-21263027 MS.gene065373:intron 30.0%
AAAGACACACTATCAAATTG+GGG + chr7.1:21263284-21263303 None:intergenic 30.0%
CTAATAGAAGAAGAATCGAA+AGG + chr7.1:21262691-21262710 None:intergenic 30.0%
GAAAGACACACTATCAAATT+GGG + chr7.1:21263285-21263304 None:intergenic 30.0%
GATATGTGCACTAATCAATT+TGG + chr7.1:21262902-21262921 None:intergenic 30.0%
! GATGATGATGATGATGAATA+TGG - chr7.1:21262589-21262608 MS.gene065373:intron 30.0%
! GGCAAGAATTTTACAAATCA+TGG - chr7.1:21263677-21263696 MS.gene065373:CDS 30.0%
! TATCTAATTTGAAGTCTCTG+AGG - chr7.1:21262962-21262981 MS.gene065373:intron 30.0%
! TGAGTCTATATACTCGATTT+TGG - chr7.1:21262381-21262400 MS.gene065373:intron 30.0%
!!! GATTTTTTGTTGCTTTTAGC+TGG - chr7.1:21262778-21262797 MS.gene065373:intron 30.0%
AAATGAAGGACATTGAGTGA+TGG + chr7.1:21262730-21262749 None:intergenic 35.0%
AAGCTAATAAAACAGCAAGC+AGG + chr7.1:21263830-21263849 None:intergenic 35.0%
AATCATCGTAAAGCTCCAAT+CGG + chr7.1:21263373-21263392 None:intergenic 35.0%
AGAATACCAACAGGCAATTT+GGG + chr7.1:21262619-21262638 None:intergenic 35.0%
AGATCACATTGTCCAAATGA+AGG + chr7.1:21262744-21262763 None:intergenic 35.0%
AGATGATGAAGAAAATTGGG+TGG - chr7.1:21263545-21263564 MS.gene065373:CDS 35.0%
ATCAAGGTTCATCCATTGTA+CGG - chr7.1:21264022-21264041 MS.gene065373:CDS 35.0%
ATCACTCAATGTCCTTCATT+TGG - chr7.1:21262729-21262748 MS.gene065373:intron 35.0%
ATTGGAGCTTTACGATGATT+GGG - chr7.1:21263373-21263392 MS.gene065373:CDS 35.0%
CATCATCATCATCATCATCA+AGG + chr7.1:21262576-21262595 None:intergenic 35.0%
CATGAATAGTGCAAGTTCTA+AGG + chr7.1:21263605-21263624 None:intergenic 35.0%
CGAAAGACACACTATCAAAT+TGG + chr7.1:21263286-21263305 None:intergenic 35.0%
CGGGACAAATTATGAAAGAT+AGG + chr7.1:21263353-21263372 None:intergenic 35.0%
GGACTGACATATGATCAAAT+TGG + chr7.1:21263162-21263181 None:intergenic 35.0%
TCAACATCTCGAACTTTACA+AGG - chr7.1:21263433-21263452 MS.gene065373:CDS 35.0%
TGTGTCTTTCGACATAATTC+AGG - chr7.1:21263295-21263314 MS.gene065373:CDS 35.0%
! CATGGAAATCTGGAACAAAT+GGG - chr7.1:21263695-21263714 MS.gene065373:CDS 35.0%
! CTTTCATAATTTGTCCCGAT+TGG - chr7.1:21263355-21263374 MS.gene065373:CDS 35.0%
! TCATGGAAATCTGGAACAAA+TGG - chr7.1:21263694-21263713 MS.gene065373:CDS 35.0%
! TGCACTATTCATGACTTTTC+AGG - chr7.1:21263612-21263631 MS.gene065373:CDS 35.0%
!! AAGTTCTAAGGTATGATGAC+AGG + chr7.1:21263593-21263612 None:intergenic 35.0%
!!! TATGATCTAGCCTTACGTTT+TGG - chr7.1:21262469-21262488 MS.gene065373:intron 35.0%
AAAATTGTCCACTTGCCCAA+AGG - chr7.1:21263737-21263756 MS.gene065373:CDS 40.0%
AAGAATCGAAAGGCTTCACA+AGG + chr7.1:21262681-21262700 None:intergenic 40.0%
ACTCGTAGATGCTCAAGATT+TGG + chr7.1:21262808-21262827 None:intergenic 40.0%
AGTTCGAGATGTTGAAGCTT+AGG + chr7.1:21263428-21263447 None:intergenic 40.0%
ATCATCGTAAAGCTCCAATC+GGG + chr7.1:21263372-21263391 None:intergenic 40.0%
CAAGCATTCTCTCAAAGAGA+TGG - chr7.1:21262275-21262294 MS.gene065373:intron 40.0%
GAGAATACCAACAGGCAATT+TGG + chr7.1:21262620-21262639 None:intergenic 40.0%
GATTGGAGCTTTACGATGAT+TGG - chr7.1:21263372-21263391 MS.gene065373:CDS 40.0%
GCATTCACAACGTCAACAAA+TGG - chr7.1:21262491-21262510 MS.gene065373:intron 40.0%
GGATAAGATCAGCAGTTTAC+CGG - chr7.1:21262198-21262217 MS.gene065373:CDS 40.0%
GGGTATATACTTCCATGATG+AGG - chr7.1:21262831-21262850 MS.gene065373:CDS 40.0%
GTACATGTGAGAATACCAAC+AGG + chr7.1:21262628-21262647 None:intergenic 40.0%
GTTCGAGATGTTGAAGCTTA+GGG + chr7.1:21263427-21263446 None:intergenic 40.0%
GTTGTGAATGCCAAAACGTA+AGG + chr7.1:21262482-21262501 None:intergenic 40.0%
TCAAGGTTCATCCATTGTAC+GGG - chr7.1:21264023-21264042 MS.gene065373:CDS 40.0%
! CATCTCTGGAAATTTACCGA+CGG - chr7.1:21262301-21262320 MS.gene065373:intron 40.0%
! GTTATTCACTGTGATGATGC+CGG + chr7.1:21262338-21262357 None:intergenic 40.0%
! TCTCTTTGAGAGAATGCTTG+TGG + chr7.1:21262275-21262294 None:intergenic 40.0%
ATCGATGAAATGAGAGCCAG+CGG + chr7.1:21262419-21262438 None:intergenic 45.0%
CTAACATAAGCTCGCTGTGT+AGG + chr7.1:21263638-21263657 None:intergenic 45.0%
CTTGAGCATCTACGAGTTGT+GGG - chr7.1:21262811-21262830 MS.gene065373:CDS 45.0%
GCGTATGGTGGTCAATACAA+TGG + chr7.1:21263183-21263202 None:intergenic 45.0%
TAAAAGTCGGCATGTTGCAG+AGG + chr7.1:21263763-21263782 None:intergenic 45.0%
TATTGACCACCATACGCTGA+AGG - chr7.1:21263186-21263205 MS.gene065373:intron 45.0%
TCTTGAGCATCTACGAGTTG+TGG - chr7.1:21262810-21262829 MS.gene065373:CDS 45.0%
TTGTCTCGCTGCACTAATGA+AGG - chr7.1:21263901-21263920 MS.gene065373:CDS 45.0%
! AGGTATGATGACAGGCATTG+AGG + chr7.1:21263585-21263604 None:intergenic 45.0%
! CAAAGAGATGGACTCATCTC+TGG - chr7.1:21262287-21262306 MS.gene065373:intron 45.0%
ACACTTGTAAGCCTCGACCT+CGG - chr7.1:21262649-21262668 MS.gene065373:intron 50.0%
ACCACCATACGCTGAAGGAA+TGG - chr7.1:21263191-21263210 MS.gene065373:intron 50.0%
ACCGACGGTATCAACTTCTC+CGG - chr7.1:21262316-21262335 MS.gene065373:intron 50.0%
AGACTTGATTGCACAGCCAC+AGG - chr7.1:21264064-21264083 MS.gene065373:CDS 50.0%
CAAGGCTATTCACACTGACG+TGG + chr7.1:21262558-21262577 None:intergenic 50.0%
CATACGCTGAAGGAATGGGA+TGG - chr7.1:21263196-21263215 MS.gene065373:intron 50.0%
CATCCCATTCCTTCAGCGTA+TGG + chr7.1:21263198-21263217 None:intergenic 50.0%
CCACCATACGCTGAAGGAAT+GGG - chr7.1:21263192-21263211 MS.gene065373:intron 50.0%
GACTTGATTGCACAGCCACA+GGG - chr7.1:21264065-21264084 MS.gene065373:CDS 50.0%
GCATACATGTGCCCGTACAA+TGG + chr7.1:21264037-21264056 None:intergenic 50.0%
GCGGATCTACTTCCTCATCA+TGG + chr7.1:21262846-21262865 None:intergenic 50.0%
GCTTTACGATGATTGGGAGG+TGG - chr7.1:21263379-21263398 MS.gene065373:CDS 50.0%
GGAGCTTTACGATGATTGGG+AGG - chr7.1:21263376-21263395 MS.gene065373:CDS 50.0%
GGCATACCCAAATTGCCTGT+TGG - chr7.1:21262610-21262629 MS.gene065373:intron 50.0%
GTTGAAGCTTAGGGCAGTGT+TGG + chr7.1:21263418-21263437 None:intergenic 50.0%
TGGCAACTGCCTCTTTGGTA+GGG + chr7.1:21262255-21262274 None:intergenic 50.0%
!! AGGCATTGAGGAACAAGCTC+TGG + chr7.1:21263573-21263592 None:intergenic 50.0%
ATCTTATCCACCGCTGGTGG+TGG + chr7.1:21262187-21262206 None:intergenic 55.0%
CCCATTCCTTCAGCGTATGG+TGG + chr7.1:21263195-21263214 None:intergenic 55.0%
CTGATCTTATCCACCGCTGG+TGG + chr7.1:21262190-21262209 None:intergenic 55.0%
CTGCTGATCTTATCCACCGC+TGG + chr7.1:21262193-21262212 None:intergenic 55.0%
GCTTCACAAGGAACCAACCG+AGG + chr7.1:21262669-21262688 None:intergenic 55.0%
GCTTGTGGCAACTGCCTCTT+TGG + chr7.1:21262260-21262279 None:intergenic 55.0%
GGCATGTTGCAGAGGCCTTT+GGG + chr7.1:21263755-21263774 None:intergenic 55.0%
GTCTCGTCTCCCTACCAAAG+AGG - chr7.1:21262243-21262262 MS.gene065373:intron 55.0%
GTGGCAACTGCCTCTTTGGT+AGG + chr7.1:21262256-21262275 None:intergenic 55.0%
TTACCGGACGCGATTCTGAG+CGG - chr7.1:21262214-21262233 MS.gene065373:intron 55.0%
TTGTAAGCCTCGACCTCGGT+TGG - chr7.1:21262653-21262672 MS.gene065373:intron 55.0%
!! GCCGGAGAAGTTGATACCGT+CGG + chr7.1:21262320-21262339 None:intergenic 55.0%
ATCCCGCTCAGAATCGCGTC+CGG + chr7.1:21262220-21262239 None:intergenic 60.0%
ATTGCACAGCCACAGGGCAG+AGG - chr7.1:21264071-21264090 MS.gene065373:CDS 60.0%
CAAGGAACCAACCGAGGTCG+AGG + chr7.1:21262663-21262682 None:intergenic 60.0%
CGGCATGTTGCAGAGGCCTT+TGG + chr7.1:21263756-21263775 None:intergenic 60.0%
TACCGGACGCGATTCTGAGC+GGG - chr7.1:21262215-21262234 MS.gene065373:intron 60.0%
TCATACACGCCTCTGCCCTG+TGG + chr7.1:21264083-21264102 None:intergenic 60.0%
TGCAGAGGCCTTTGGGCAAG+TGG + chr7.1:21263748-21263767 None:intergenic 60.0%
! GGGCAGTGTTGGAGCACTTG+CGG + chr7.1:21263407-21263426 None:intergenic 60.0%
!! AGAAGCACCACCACCACCAG+CGG - chr7.1:21262174-21262193 MS.gene065373:CDS 60.0%
!! TTATCCACCGCTGGTGGTGG+TGG + chr7.1:21262184-21262203 None:intergenic 60.0%
AGCACCACCACCACCAGCGG+TGG - chr7.1:21262177-21262196 MS.gene065373:CDS 70.0%
TTGGTCTCTCGCGACGCCGC+TGG - chr7.1:21262400-21262419 MS.gene065373:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 21262148 21264102 21262148 ID=MS.gene065373
chr7.1 mRNA 21262148 21264102 21262148 ID=MS.gene065373.t1;Parent=MS.gene065373
chr7.1 exon 21263221 21264102 21263221 ID=MS.gene065373.t1.exon1;Parent=MS.gene065373.t1
chr7.1 CDS 21263221 21264102 21263221 ID=cds.MS.gene065373.t1;Parent=MS.gene065373.t1
chr7.1 exon 21262796 21262933 21262796 ID=MS.gene065373.t1.exon2;Parent=MS.gene065373.t1
chr7.1 CDS 21262796 21262933 21262796 ID=cds.MS.gene065373.t1;Parent=MS.gene065373.t1
chr7.1 exon 21262148 21262228 21262148 ID=MS.gene065373.t1.exon3;Parent=MS.gene065373.t1
chr7.1 CDS 21262148 21262228 21262148 ID=cds.MS.gene065373.t1;Parent=MS.gene065373.t1
Gene Sequence

>MS.gene065373

ATGGGGCGACGGAGGAAGAGAATTTCAGAAGCACCACCACCACCAGCGGTGGATAAGATCAGCAGTTTACCGGACGCGATTCTGAGCGGGATTCTGTCTCGTCTCCCTACCAAAGAGGCAGTTGCCACAAGCATTCTCTCAAAGAGATGGACTCATCTCTGGAAATTTACCGACGGTATCAACTTCTCCGGCATCATCACAGTGAATAACATTGAATCTAATTACAGTTTAAATGAGTCTATATACTCGATTTTGGTCTCTCGCGACGCCGCTGGCTCTCATTTCATCGATAGTTTTAGTCTCGAAATTGAATATGGTAGTTATGATCTAGCCTTACGTTTTGGCATTCACAACGTCAACAAATGGATTAACTTCATTGTTCAACGCAAACTCAAGCATCTTCGTCTCCACGTCAGTGTGAATAGCCTTGATGATGATGATGATGATGATGATGATGAATATGGCATACCCAAATTGCCTGTTGGTATTCTCACATGTACAACACTTGTAAGCCTCGACCTCGGTTGGTTCCTTGTGAAGCCTTTCGATTCTTCTTCTATTAGATTTGGATTTGGATTTCCATCACTCAATGTCCTTCATTTGGACAATGTGATCTTTGATGAACTTCAAGATTTTTTGTTGCTTTTAGCTGGATGTCCAAATCTTGAGCATCTACGAGTTGTGGGTATATACTTCCATGATGAGGAAGTAGATCCGCTATTCATTCAAGAGTTTAAAAGCTTTAGCTTACCCAAATTGATTAGTGCACATATCACTCATTGTTGTTTGTCTTCATATTTTCCGTTGAAAGCACTATCTAATTTGAAGTCTCTGAGGATAGATACATTCATGTTTCGCACAAAAGATCACAAATTCTTCCAGGTTCGTTTTATTTATTTATTTATTGAGTATCATGCATTGCTACCTCAATCTATATAATACTGTCTGTGTCCAATATAACACAATTGATTACATTCAAAAATTTGATTACATTCAATAATTCCGTTTTCTCCAATTTGATCATATGTCAGTCCATTGTATTGACCACCATACGCTGAAGGAATGGGATGGAAAACAAAGCAAAAATGTGATTCATCTGCCATGTTTTTTCTTTTTTCTTTTTGTGAATTTTGCCCCAATTTGATAGTGTGTCTTTCGACATAATTCAGGCGAATCAGCTGCAACGCCGTTATGATGATATTCCTATCTTTCATAATTTGTCCCGATTGGAGCTTTACGATGATTGGGAGGTGGTACCGCAAGTGCTCCAACACTGCCCTAAGCTTCAACATCTCGAACTTTACAAGGTTTGTTAAGTCTAAGAAGTAAGAACCATATTCGGTTTATCTTTTCTTAACACACCTTAACTTTAGTTATGTGCAATATTAATAGGAAAAAGATGATGAAGAAAATTGGGTGGAACCAGAGCTTGTTCCTCAATGCCTGTCATCATACCTTAGAACTTGCACTATTCATGACTTTTCAGGCCTACACAGCGAGCTTATGTTAGCAAAATATATTTTGATGAAGGCAAGAATTTTACAAATCATGGAAATCTGGAACAAATGGGATGAACCTAAAATCAAAAGAAAATTGTCCACTTGCCCAAAGGCCTCTGCAACATGCCGACTTTTATTTTATTGATAACATATAGACTGTGTAAATAGTAGTTTCTCTATCCTGCTTGCTGTTTTATTAGCTTCTATTTGGTTGTTTGAACTTTGAACTATGAGTTATTATGAATGTCATGACTTTGTCTCGCTGCACTAATGAAGGAAAAATGATCTTTAAATGATTTATTAGTACTCATCTACCCTAACTTTTTATTTATATACATTTATGTATTTATTGAACCTGTTTATGACTTCAATTAGATCAAGGTTCATCCATTGTACGGGCACATGTATGCAAAATTCAGACTTGATTGCACAGCCACAGGGCAGAGGCGTGTATGA

Protein sequence

>MS.gene065373.t1

MGRRRKRISEAPPPPAVDKISSLPDAILSGILSRLPTKEAVATSILSKRWTHLWKFTDGINFSGIITVNNIESNYSLNESIYSILVSRDAAGSHFIDSFSLEIEYGSYDLALRFGIHNVNKWINFIVQRKLKHLRLHVSVNSLDDDDDDDDDEYGIPKLPVGILTCTTLVSLDLGWFLVKPFDSSSIRFGFGFPSLNVLHLDNVIFDELQDFLLLLAGCPNLEHLRVVGIYFHDEEVDPLFIQEFKSFSLPKLISAHITHCCLSSYFPLKALSNLKSLRIDTFMFRTKDHKFFQANQLQRRYDDIPIFHNLSRLELYDDWEVVPQVLQHCPKLQHLELYKIKVHPLYGHMYAKFRLDCTATGQRRV