AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78164


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78164.t1 MTR_3g107160 45.118 297 143 10 3 289 9 295 3.91e-62 202
MS.gene78164.t1 MTR_3g107120 43.279 305 144 9 4 289 9 303 1.63e-56 188
MS.gene78164.t1 MTR_3g107100 44.186 301 153 9 4 298 11 302 7.11e-54 181
MS.gene78164.t1 MTR_4g098590 41.611 298 153 11 6 289 1 291 6.40e-51 172
MS.gene78164.t1 MTR_2g007450 39.450 327 148 9 4 291 16 331 1.15e-50 173
MS.gene78164.t1 MTR_5g083890 39.394 330 171 11 3 313 5 324 1.58e-50 175
MS.gene78164.t1 MTR_2g005990 38.562 306 172 6 1 295 3 303 5.69e-47 163
MS.gene78164.t1 MTR_1g053025 38.961 308 165 9 4 295 2 302 3.01e-45 158
MS.gene78164.t1 MTR_2g007500 38.944 303 148 9 2 289 12 292 1.69e-44 155
MS.gene78164.t1 MTR_3g099830 38.908 293 149 9 4 292 12 278 4.63e-43 152
MS.gene78164.t1 MTR_1g107385 36.336 333 171 13 2 314 30 341 1.74e-42 152
MS.gene78164.t1 MTR_1g041245 36.610 295 165 10 4 289 11 292 3.12e-42 150
MS.gene78164.t1 MTR_2g007400 37.580 314 175 9 4 304 12 317 1.66e-40 146
MS.gene78164.t1 MTR_7g075820 34.494 316 176 10 2 296 4 309 2.86e-40 145
MS.gene78164.t1 MTR_7g083740 35.048 311 158 8 2 305 15 288 1.98e-37 137
MS.gene78164.t1 MTR_3g026920 35.404 322 148 11 4 287 19 318 6.11e-37 136
MS.gene78164.t1 MTR_2g008320 36.964 303 171 10 2 294 50 342 7.18e-37 137
MS.gene78164.t1 MTR_7g115270 34.202 307 177 8 2 289 10 310 7.68e-36 133
MS.gene78164.t1 MTR_7g034090 52.288 153 62 2 1 148 1 147 2.09e-35 133
MS.gene78164.t1 MTR_7g098510 35.235 298 165 9 4 289 18 299 1.27e-34 130
MS.gene78164.t1 MTR_2g008310 35.691 311 176 8 4 304 2 298 1.27e-34 130
MS.gene78164.t1 MTR_5g058100 34.219 301 168 11 4 289 9 294 1.55e-34 129
MS.gene78164.t1 MTR_7g007340 38.176 296 137 12 4 294 13 267 2.78e-34 129
MS.gene78164.t1 MTR_5g058000 34.797 296 165 9 4 289 8 285 4.18e-34 128
MS.gene78164.t1 MTR_7g007080 33.553 304 173 7 1 290 1 289 2.29e-33 126
MS.gene78164.t1 MTR_7g033990 35.880 301 162 13 4 290 11 294 4.91e-33 126
MS.gene78164.t1 MTR_7g056433 32.895 304 184 10 2 295 10 303 1.43e-32 124
MS.gene78164.t1 MTR_5g073420 34.589 292 169 9 1 285 8 284 1.77e-32 124
MS.gene78164.t1 MTR_7g056447 38.389 211 118 4 2 209 7 208 2.95e-32 121
MS.gene78164.t1 MTR_3g040700 34.354 294 164 8 4 289 43 315 3.52e-32 124
MS.gene78164.t1 MTR_3g036250 34.471 293 165 7 4 289 5 277 5.66e-32 122
MS.gene78164.t1 MTR_7g088260 33.553 304 165 10 2 289 89 371 1.33e-31 123
MS.gene78164.t1 MTR_7g098570 35.034 294 171 8 4 289 20 301 1.46e-31 123
MS.gene78164.t1 MTR_3g108150 34.304 309 171 12 3 297 12 302 6.95e-31 120
MS.gene78164.t1 MTR_3g108560 34.333 300 169 14 3 292 19 300 2.69e-30 117
MS.gene78164.t1 MTR_7g098480 34.768 302 159 11 4 289 18 297 3.63e-30 119
MS.gene78164.t1 MTR_3g082890 32.686 309 173 8 4 289 97 393 5.94e-30 119
MS.gene78164.t1 MTR_3g108560 34.564 298 167 14 3 290 19 298 7.74e-30 117
MS.gene78164.t1 MTR_3g082890 32.797 311 172 9 4 290 17 314 7.85e-30 118
MS.gene78164.t1 MTR_5g007410 32.886 298 178 9 6 289 28 317 1.16e-29 117
MS.gene78164.t1 MTR_1g085120 31.392 309 190 8 4 299 92 391 1.26e-29 117
MS.gene78164.t1 MTR_1g085120 32.000 300 182 8 4 290 179 469 1.38e-29 117
MS.gene78164.t1 MTR_4g039440 34.884 301 166 11 4 289 34 319 1.61e-29 116
MS.gene78164.t1 MTR_1g085120 31.392 309 190 8 4 299 167 466 2.70e-29 117
MS.gene78164.t1 MTR_7g032380 31.333 300 158 9 4 295 11 270 3.45e-29 114
MS.gene78164.t1 MTR_7g056420 32.323 297 159 9 2 289 7 270 4.20e-29 117
MS.gene78164.t1 MTR_7g056430 32.323 297 159 9 2 289 7 270 4.90e-29 117
MS.gene78164.t1 MTR_5g045170 32.432 296 177 8 6 289 16 300 9.56e-29 114
MS.gene78164.t1 MTR_7g026500 32.278 316 164 12 2 289 12 305 1.05e-28 114
MS.gene78164.t1 MTR_7g033915 30.519 308 159 12 4 294 11 280 1.08e-28 113
MS.gene78164.t1 MTR_2g007360 33.439 314 157 11 2 304 10 282 1.15e-28 114
MS.gene78164.t1 MTR_8g085430 38.278 209 112 6 4 202 11 212 1.33e-28 112
MS.gene78164.t1 MTR_5g008950 30.717 293 174 9 6 289 1 273 1.94e-28 113
MS.gene78164.t1 MTR_0492s0020 32.770 296 172 9 2 290 84 359 2.15e-28 114
MS.gene78164.t1 MTR_6g022500 31.046 306 191 9 4 299 101 396 2.34e-28 114
MS.gene78164.t1 MTR_0543s0010 32.323 297 172 8 2 290 84 359 2.48e-28 114
MS.gene78164.t1 MTR_7g032370 34.859 284 150 11 16 289 2 260 2.75e-28 112
MS.gene78164.t1 MTR_5g008920 31.987 297 180 10 2 289 7 290 2.91e-28 112
MS.gene78164.t1 MTR_7g055943 33.115 305 186 9 4 299 40 335 4.26e-28 113
MS.gene78164.t1 MTR_6g011460 33.444 302 178 9 4 295 46 334 4.40e-28 112
MS.gene78164.t1 MTR_7g034115 34.551 301 162 12 4 289 11 291 1.20e-27 111
MS.gene78164.t1 MTR_3g467400 32.979 282 150 11 4 268 3 262 2.75e-27 109
MS.gene78164.t1 MTR_5g073340 33.221 298 152 11 4 289 8 270 3.83e-27 108
MS.gene78164.t1 MTR_5g045510 31.599 269 153 8 6 260 14 265 1.82e-26 107
MS.gene78164.t1 MTR_7g060470 30.275 327 187 11 4 303 3 315 6.46e-26 106
MS.gene78164.t1 MTR_6g040270 34.021 291 174 9 6 289 10 289 7.77e-26 106
MS.gene78164.t1 MTR_1089s0010 33.333 288 170 10 4 283 8 281 3.31e-25 104
MS.gene78164.t1 MTR_7g007370 34.007 297 138 11 4 298 17 257 4.37e-25 103
MS.gene78164.t1 MTR_5g061680 34.576 295 151 12 1 287 8 268 4.75e-25 103
MS.gene78164.t1 MTR_6g022360 32.095 296 169 9 4 289 43 316 6.99e-25 103
MS.gene78164.t1 MTR_2g036470 33.221 298 171 10 4 285 14 299 1.91e-24 102
MS.gene78164.t1 MTR_5g031970 29.667 300 150 7 4 290 16 267 3.40e-24 101
MS.gene78164.t1 MTR_0009s0080 31.833 311 176 9 6 300 20 310 4.00e-24 102
MS.gene78164.t1 MTR_6g044572 29.217 332 169 10 4 299 2 303 6.52e-24 100
MS.gene78164.t1 MTR_6g045333 30.233 301 187 10 4 289 61 353 7.66e-24 101
MS.gene78164.t1 MTR_6g044560 29.341 334 170 10 2 299 176 479 9.36e-24 101
MS.gene78164.t1 MTR_1g108820 32.248 307 173 10 4 290 8 299 1.94e-23 99.4
MS.gene78164.t1 MTR_1g108820 32.450 302 169 10 4 285 8 294 4.04e-23 98.2
MS.gene78164.t1 MTR_2g007550 31.293 294 136 12 4 289 14 249 1.22e-22 96.7
MS.gene78164.t1 MTR_3g023630 30.164 305 191 11 4 300 8 298 1.46e-22 97.1
MS.gene78164.t1 MTR_7g034110 31.208 298 141 10 4 290 11 255 8.40e-22 94.4
MS.gene78164.t1 MTR_1g492880 58.333 84 34 1 3 86 5 87 1.28e-21 87.8
MS.gene78164.t1 MTR_2g007530 33.333 225 104 6 4 189 19 236 1.49e-21 93.6
MS.gene78164.t1 MTR_1g492880 58.333 84 34 1 3 86 5 87 1.50e-21 88.2
MS.gene78164.t1 MTR_3g110010 29.712 313 184 9 3 304 12 299 3.69e-21 94.4
MS.gene78164.t1 MTR_3g109982 29.712 313 184 9 3 304 12 299 4.84e-21 94.0
MS.gene78164.t1 MTR_8g467800 34.884 215 130 5 4 212 20 230 5.45e-21 92.0
MS.gene78164.t1 MTR_3g107140 41.618 173 85 4 34 195 22 189 8.83e-21 88.6
MS.gene78164.t1 MTR_4g134150 32.804 189 111 6 2 188 12 186 2.27e-20 88.2
MS.gene78164.t1 MTR_8g467800 34.884 215 130 5 4 212 20 230 2.67e-20 91.3
MS.gene78164.t1 MTR_7g056280 35.593 177 108 4 3 176 5 178 4.05e-20 91.3
MS.gene78164.t1 MTR_7g056280 42.609 115 61 2 178 289 367 479 6.71e-18 84.3
MS.gene78164.t1 MTR_3g105060 29.452 292 180 11 4 287 14 287 4.85e-20 89.7
MS.gene78164.t1 MTR_5g073370 30.769 299 191 8 4 295 5 294 9.32e-20 89.0
MS.gene78164.t1 MTR_7g075800 28.012 332 187 12 2 295 7 324 2.01e-19 89.4
MS.gene78164.t1 MTR_3g095600 33.065 248 123 10 1 240 1 213 2.05e-19 87.0
MS.gene78164.t1 MTR_3g071850 29.934 304 176 12 4 285 24 312 2.14e-19 89.4
MS.gene78164.t1 MTR_5g012840 28.716 296 147 10 28 312 13 255 2.17e-19 87.4
MS.gene78164.t1 MTR_1g066830 29.352 293 185 9 4 283 8 291 2.47e-19 87.8
MS.gene78164.t1 MTR_7g114710 28.339 307 172 13 4 299 13 282 3.52e-19 87.4
MS.gene78164.t1 MTR_7g033945 35.503 169 95 5 4 165 11 172 5.80e-19 83.2
MS.gene78164.t1 MTR_8g062270 31.818 198 119 6 4 188 16 210 7.71e-19 87.0
MS.gene78164.t1 MTR_7g056287 30.921 304 187 12 4 298 3 292 1.08e-18 85.9
MS.gene78164.t1 MTR_4g056020 27.536 345 178 12 4 285 9 344 1.15e-18 86.7
MS.gene78164.t1 MTR_5g013500 29.085 306 159 12 2 289 7 272 1.67e-18 85.5
MS.gene78164.t1 MTR_7g056277 30.592 304 188 12 4 298 259 548 2.00e-18 86.3
MS.gene78164.t1 MTR_4g032730 33.168 202 116 7 4 191 15 211 1.33e-17 83.2
MS.gene78164.t1 MTR_8g058965 33.178 214 117 9 4 197 13 220 2.75e-17 82.4
MS.gene78164.t1 MTR_5g039470 27.915 283 178 7 20 287 1 272 2.98e-17 81.3
MS.gene78164.t1 MTR_5g058350 35.135 185 90 4 4 188 8 162 5.66e-17 77.8
MS.gene78164.t1 MTR_8g468810 31.797 217 140 6 3 212 24 239 5.86e-17 80.5
MS.gene78164.t1 MTR_3g087260 30.573 314 163 14 3 304 11 281 6.79e-17 81.3
MS.gene78164.t1 MTR_8g468810 31.797 217 140 6 3 212 24 239 6.84e-17 80.1
MS.gene78164.t1 MTR_8g468810 31.797 217 140 6 3 212 24 239 7.27e-17 80.5
MS.gene78164.t1 MTR_7g033940 39.450 109 61 2 6 114 96 199 7.73e-17 78.6
MS.gene78164.t1 MTR_8g468810 31.797 217 140 6 3 212 24 239 8.33e-17 80.9
MS.gene78164.t1 MTR_8g468810 31.797 217 140 6 3 212 24 239 1.01e-16 80.1
MS.gene78164.t1 MTR_8g014160 32.323 198 120 8 3 188 40 235 1.04e-16 80.5
MS.gene78164.t1 MTR_8g468760 28.986 276 165 13 4 262 9 270 1.68e-16 79.7
MS.gene78164.t1 MTR_1g108800 29.310 290 141 9 4 280 8 246 2.53e-16 79.0
MS.gene78164.t1 MTR_3g114200 40.000 140 76 4 4 141 19 152 2.71e-16 75.5
MS.gene78164.t1 MTR_5g039450 28.053 303 172 10 4 289 6 279 2.97e-16 78.6
MS.gene78164.t1 MTR_5g087940 35.758 165 90 6 3 165 25 175 3.51e-16 79.0
MS.gene78164.t1 MTR_8g469020 28.641 206 128 4 2 188 5 210 3.64e-16 79.0
MS.gene78164.t1 MTR_8g058970 30.380 237 132 9 4 212 19 250 4.48e-16 79.0
MS.gene78164.t1 MTR_8g014260 30.466 279 160 10 3 262 15 278 5.85e-16 78.6
MS.gene78164.t1 MTR_8g062010 32.804 189 119 5 2 186 7 191 7.27e-16 78.2
MS.gene78164.t1 MTR_5g063950 28.808 302 169 13 4 295 8 273 8.19e-16 77.4
MS.gene78164.t1 MTR_5g039490 28.832 274 166 9 4 261 20 280 1.28e-15 77.0
MS.gene78164.t1 MTR_2g090845 30.612 245 137 8 4 232 14 241 1.39e-15 77.0
MS.gene78164.t1 MTR_2g083840 32.995 197 121 6 4 191 21 215 1.68e-15 77.0
MS.gene78164.t1 MTR_5g084070 27.841 352 186 13 4 302 13 349 2.52e-15 76.6
MS.gene78164.t1 MTR_7g056020 30.645 310 160 13 4 295 16 288 4.68e-15 76.3
MS.gene78164.t1 MTR_3g023270 30.698 215 139 5 1 214 9 214 5.28e-15 75.1
MS.gene78164.t1 MTR_8g062080 29.259 270 157 11 2 263 21 264 5.35e-15 75.5
MS.gene78164.t1 MTR_2g020170 39.669 121 60 5 4 119 22 134 7.59e-15 70.9
MS.gene78164.t1 MTR_5g092960 33.171 205 120 8 4 197 19 217 2.27e-14 73.6
MS.gene78164.t1 MTR_5g092960 33.171 205 120 8 4 197 19 217 2.94e-14 73.2
MS.gene78164.t1 MTR_8g070950 32.353 238 134 12 3 228 14 236 3.24e-14 73.2
MS.gene78164.t1 MTR_7g081290 48.235 85 44 0 4 88 18 102 3.39e-14 71.6
MS.gene78164.t1 MTR_3g006580 31.982 222 129 7 3 214 32 241 3.91e-14 72.8
MS.gene78164.t1 MTR_8g445780 25.651 269 175 11 3 262 12 264 4.32e-14 72.8
MS.gene78164.t1 MTR_7g034120 29.876 241 135 11 70 292 1 225 5.09e-14 71.6
MS.gene78164.t1 MTR_0227s0010 28.311 219 131 8 4 210 15 219 5.50e-14 72.0
MS.gene78164.t1 MTR_2g082800 32.474 194 117 8 2 190 25 209 6.25e-14 72.4
MS.gene78164.t1 MTR_7g094030 36.364 165 94 7 2 164 26 181 6.53e-14 72.4
MS.gene78164.t1 MTR_5g082930 40.698 86 47 1 6 87 17 102 1.04e-13 69.3
MS.gene78164.t1 MTR_4g093690 31.795 195 114 6 4 189 18 202 1.05e-13 70.5
MS.gene78164.t1 MTR_4g050250 27.523 218 134 6 2 198 19 233 1.06e-13 71.6
MS.gene78164.t1 MTR_5g061410 29.000 300 166 11 2 289 3 267 1.14e-13 70.5
MS.gene78164.t1 MTR_2g082880 33.500 200 116 9 3 196 9 197 1.15e-13 71.6
MS.gene78164.t1 MTR_8g468910 33.728 169 93 4 6 164 50 209 1.36e-13 71.2
MS.gene78164.t1 MTR_4g056030 26.124 356 183 16 4 292 9 351 1.68e-13 71.2
MS.gene78164.t1 MTR_7g021630 25.912 274 157 8 3 248 16 271 2.05e-13 70.5
MS.gene78164.t1 MTR_7g021630 25.912 274 157 8 3 248 16 271 2.47e-13 70.1
MS.gene78164.t1 MTR_8g468840 30.500 200 126 6 3 191 13 210 2.57e-13 70.5
MS.gene78164.t1 MTR_7g098590 49.412 85 40 1 4 88 18 99 4.69e-13 65.9
MS.gene78164.t1 MTR_1g077420 28.492 179 114 5 1 174 1 170 9.02e-13 67.8
MS.gene78164.t1 MTR_3g023440 31.963 219 128 8 3 215 2 205 1.07e-12 68.6
MS.gene78164.t1 MTR_4g014260 31.548 168 99 5 3 164 25 182 1.39e-12 68.2
MS.gene78164.t1 MTR_4g014260 31.548 168 99 5 3 164 25 182 1.47e-12 68.2
MS.gene78164.t1 MTR_1g095750 47.619 84 33 2 4 82 46 123 1.52e-12 64.7
MS.gene78164.t1 MTR_6g022390 39.844 128 66 4 1 119 2 127 2.07e-12 64.3
MS.gene78164.t1 MTR_2g072530 33.099 142 87 4 3 141 12 148 2.20e-12 67.8
MS.gene78164.t1 MTR_4g056040 26.872 227 120 8 4 192 9 227 2.36e-12 67.8
MS.gene78164.t1 MTR_7g023310 29.167 192 127 4 3 192 25 209 2.78e-12 67.4
MS.gene78164.t1 MTR_1g067190 33.803 142 82 4 3 142 14 145 3.47e-12 66.6
MS.gene78164.t1 MTR_1g021825 26.174 298 164 10 4 285 17 274 5.40e-12 66.6
MS.gene78164.t1 MTR_1g021825 26.174 298 164 10 4 285 88 345 6.16e-12 66.6
MS.gene78164.t1 MTR_2g082850 31.111 180 102 7 2 169 20 189 7.08e-12 65.9
MS.gene78164.t1 MTR_5g065100 32.161 199 117 7 6 198 10 196 7.10e-12 66.2
MS.gene78164.t1 MTR_6g092430 28.934 197 123 6 4 190 10 199 1.18e-11 65.5
MS.gene78164.t1 MTR_1g090900 30.286 175 111 6 3 174 10 176 1.92e-11 62.8
MS.gene78164.t1 MTR_4g024680 28.829 222 132 8 3 215 153 357 2.06e-11 65.1
MS.gene78164.t1 MTR_3g113782 47.619 63 33 0 3 65 16 78 2.18e-11 59.7
MS.gene78164.t1 MTR_2g099980 31.176 170 104 5 2 165 36 198 2.60e-11 64.3
MS.gene78164.t1 MTR_8g465380 29.646 226 131 7 4 212 12 226 2.63e-11 64.3
MS.gene78164.t1 MTR_8g066650 33.918 171 93 6 3 165 79 237 2.93e-11 64.3
MS.gene78164.t1 MTR_2g094750 28.431 204 123 7 6 188 92 293 3.13e-11 64.3
MS.gene78164.t1 MTR_3g052990 31.737 167 100 5 3 164 27 184 3.76e-11 63.9
MS.gene78164.t1 MTR_4g090940 32.857 140 86 4 3 141 158 290 5.15e-11 63.9
MS.gene78164.t1 MTR_6g061720 51.562 64 30 1 9 71 13 76 5.33e-11 58.2
MS.gene78164.t1 MTR_1g011430 27.895 190 126 5 4 190 7 188 5.69e-11 63.2
MS.gene78164.t1 MTR_2g101950 30.531 226 123 8 3 212 79 286 6.71e-11 63.2
MS.gene78164.t1 MTR_3g052940 30.769 169 103 5 3 166 27 186 7.81e-11 63.2
MS.gene78164.t1 MTR_3g052940 30.769 169 103 5 3 166 27 186 8.14e-11 63.2
MS.gene78164.t1 MTR_6g018660 31.183 186 107 6 4 174 20 199 8.34e-11 62.8
MS.gene78164.t1 MTR_3g052940 30.769 169 103 5 3 166 27 186 9.44e-11 62.8
MS.gene78164.t1 MTR_7g033470 46.154 78 41 1 1 77 11 88 9.94e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78164.t1 AT1G16930 26.781 351 179 9 4 287 15 354 6.07e-26 107
MS.gene78164.t1 AT1G16930 26.781 351 179 9 4 287 15 354 6.07e-26 107
MS.gene78164.t1 AT1G16930 26.781 351 179 9 4 287 15 354 6.07e-26 107
MS.gene78164.t1 AT3G60040 29.692 357 182 13 2 290 11 366 4.13e-24 102
MS.gene78164.t1 AT3G60040 29.692 357 182 13 2 290 230 585 5.68e-24 102
MS.gene78164.t1 AT3G60040 29.692 357 182 13 2 290 231 586 5.85e-24 102
MS.gene78164.t1 AT3G60040 29.692 357 182 13 2 290 228 583 7.41e-24 102
MS.gene78164.t1 AT3G60040 29.692 357 182 13 2 290 230 585 8.97e-24 102
MS.gene78164.t1 AT3G58860 27.954 347 185 10 4 291 7 347 2.03e-22 97.4
MS.gene78164.t1 AT3G59200 29.710 276 164 11 1 262 4 263 1.69e-21 94.0
MS.gene78164.t1 AT4G14096 27.855 359 181 13 3 294 7 354 2.20e-21 94.4
MS.gene78164.t1 AT4G14096 27.855 359 181 13 3 294 7 354 2.20e-21 94.4
MS.gene78164.t1 AT4G14103 26.954 371 178 15 2 294 6 361 2.70e-21 93.6
MS.gene78164.t1 AT4G14103 26.954 371 178 15 2 294 6 361 2.70e-21 93.6
MS.gene78164.t1 AT3G59200 29.710 276 164 11 1 262 4 263 3.35e-21 94.4
MS.gene78164.t1 AT1G06630 28.205 351 182 14 3 290 20 363 1.26e-20 92.0
MS.gene78164.t1 AT4G14103 32.692 208 110 7 2 194 6 198 1.56e-20 92.0
MS.gene78164.t1 AT1G06630 27.920 351 183 14 3 290 11 354 1.57e-20 91.7
MS.gene78164.t1 AT1G06630 27.920 351 183 14 3 290 11 354 1.57e-20 91.7
MS.gene78164.t1 AT1G06630 27.920 351 183 14 3 290 11 354 1.57e-20 91.7
MS.gene78164.t1 AT1G06630 27.920 351 183 14 3 290 11 354 1.57e-20 91.7
MS.gene78164.t1 AT1G06630 28.161 348 180 14 3 287 11 351 2.98e-20 90.1
MS.gene78164.t1 AT1G06630 28.161 348 180 14 3 287 11 351 2.98e-20 90.1
MS.gene78164.t1 AT1G06630 27.920 351 183 14 3 290 11 354 3.55e-20 90.9
MS.gene78164.t1 AT3G44810 32.314 229 137 7 6 222 9 231 3.83e-20 90.9
MS.gene78164.t1 AT1G69630 34.872 195 107 8 4 190 18 200 6.09e-20 90.1
MS.gene78164.t1 AT2G26030 31.683 202 120 7 1 195 1 191 6.47e-20 90.1
MS.gene78164.t1 AT2G26030 31.683 202 120 7 1 195 1 191 6.47e-20 90.1
MS.gene78164.t1 AT2G26030 31.683 202 120 7 1 195 1 191 6.89e-20 90.1
MS.gene78164.t1 AT3G59190 33.019 212 121 7 2 200 10 213 6.70e-19 86.7
MS.gene78164.t1 AT1G48400 33.632 223 127 8 3 214 9 221 7.26e-19 87.4
MS.gene78164.t1 AT3G59190 33.663 202 113 7 2 190 10 203 7.56e-19 87.4
MS.gene78164.t1 AT1G06630 29.412 238 139 7 3 228 11 231 8.65e-19 85.5
MS.gene78164.t1 AT1G48400 33.632 223 127 8 3 214 9 221 9.19e-19 87.0
MS.gene78164.t1 AT1G58310 29.371 286 166 7 2 262 6 280 9.53e-19 87.0
MS.gene78164.t1 AT3G42770 27.874 348 189 12 6 293 1 346 1.17e-18 86.7
MS.gene78164.t1 AT1G78750 29.911 224 142 6 4 218 18 235 1.49e-18 86.3
MS.gene78164.t1 AT1G78750 29.911 224 142 6 4 218 18 235 1.49e-18 86.3
MS.gene78164.t1 AT4G13985 29.648 199 128 5 4 194 19 213 2.55e-18 85.5
MS.gene78164.t1 AT3G03040 27.322 366 182 12 4 291 2 361 4.11e-18 85.1
MS.gene78164.t1 AT3G59210 32.821 195 117 5 2 188 5 193 4.37e-18 84.7
MS.gene78164.t1 AT3G59210 32.821 195 117 5 2 188 5 193 4.37e-18 84.7
MS.gene78164.t1 AT3G59210 32.821 195 117 5 2 188 5 193 4.37e-18 84.7
MS.gene78164.t1 AT3G59210 32.821 195 117 5 2 188 5 193 4.37e-18 84.7
MS.gene78164.t1 AT3G59210 32.821 195 117 5 2 188 5 193 4.37e-18 84.7
MS.gene78164.t1 AT1G60410 34.715 193 116 5 2 190 8 194 4.90e-18 84.3
MS.gene78164.t1 AT4G00160 34.197 193 118 6 1 190 13 199 7.96e-18 84.0
MS.gene78164.t1 AT5G22720 29.268 205 122 8 3 200 22 210 8.20e-18 84.0
MS.gene78164.t1 AT3G59170 31.982 222 121 7 1 194 4 223 9.76e-18 84.0
MS.gene78164.t1 AT5G41830 32.227 211 120 6 3 196 12 216 1.06e-17 84.0
MS.gene78164.t1 AT3G62440 32.536 209 121 5 4 196 2 206 1.78e-17 83.2
MS.gene78164.t1 AT3G59240 28.643 199 128 5 3 193 7 199 1.89e-17 83.2
MS.gene78164.t1 AT3G59230 25.722 381 185 15 3 294 11 382 2.78e-17 82.4
MS.gene78164.t1 AT3G58920 31.020 245 129 9 4 225 2 229 3.18e-17 82.4
MS.gene78164.t1 AT5G38590 33.511 188 117 5 4 190 2 182 3.45e-17 80.5
MS.gene78164.t1 AT1G51370 31.683 202 120 8 3 201 18 204 4.63e-17 80.9
MS.gene78164.t1 AT3G58880 28.090 356 177 11 4 287 3 351 5.17e-17 81.6
MS.gene78164.t1 AT1G51370 31.683 202 120 8 3 201 18 204 5.91e-17 81.3
MS.gene78164.t1 AT1G51370 31.683 202 120 8 3 201 18 204 6.09e-17 81.3
MS.gene78164.t1 AT5G38590 33.511 188 117 5 4 190 2 182 6.73e-17 81.3
MS.gene78164.t1 AT3G59160 32.727 220 116 7 2 193 11 226 1.02e-16 80.9
MS.gene78164.t1 AT5G41840 31.604 212 119 7 1 193 11 215 1.20e-16 80.9
MS.gene78164.t1 AT5G44950 32.323 198 113 8 1 190 1 185 1.29e-16 80.5
MS.gene78164.t1 AT1G21990 32.381 210 116 10 1 198 6 201 1.31e-16 80.5
MS.gene78164.t1 AT3G58980 29.348 276 158 10 4 262 2 257 1.37e-16 80.5
MS.gene78164.t1 AT4G10400 31.633 196 114 6 4 191 2 185 1.55e-16 80.1
MS.gene78164.t1 AT4G10400 31.633 196 114 6 4 191 2 185 1.55e-16 80.1
MS.gene78164.t1 AT4G10400 31.633 196 114 6 4 191 2 185 1.55e-16 80.1
MS.gene78164.t1 AT3G49150 31.188 202 124 7 3 196 15 209 1.84e-16 80.1
MS.gene78164.t1 AT5G18780 30.698 215 137 7 2 213 9 214 2.00e-16 79.3
MS.gene78164.t1 AT5G18780 30.698 215 137 7 2 213 9 214 2.00e-16 79.3
MS.gene78164.t1 AT5G38390 34.848 198 102 8 4 193 2 180 2.24e-16 79.7
MS.gene78164.t1 AT1G66300 25.287 261 163 8 4 258 29 263 2.48e-16 79.7
MS.gene78164.t1 AT3G44080 27.301 326 184 8 9 308 12 310 2.80e-16 79.0
MS.gene78164.t1 AT5G18780 30.698 215 137 7 2 213 9 214 3.14e-16 79.3
MS.gene78164.t1 AT5G18780 30.698 215 137 7 2 213 9 214 3.14e-16 79.3
MS.gene78164.t1 AT5G22700 27.864 323 192 11 4 294 43 356 3.68e-16 79.0
MS.gene78164.t1 AT4G00320 30.806 211 119 6 2 193 11 213 4.75e-16 79.0
MS.gene78164.t1 AT2G26860 30.412 194 121 4 4 190 2 188 4.94e-16 78.6
MS.gene78164.t1 AT2G26860 30.412 194 121 4 4 190 2 188 4.94e-16 78.6
MS.gene78164.t1 AT4G09920 31.282 195 114 6 4 190 2 184 8.17e-16 77.0
MS.gene78164.t1 AT4G09920 31.282 195 114 6 4 190 2 184 8.17e-16 77.0
MS.gene78164.t1 AT1G60400 26.934 349 178 16 4 287 14 350 8.21e-16 77.8
MS.gene78164.t1 AT3G44060 27.485 342 182 13 9 290 4 339 8.61e-16 77.8
MS.gene78164.t1 AT4G09920 30.242 248 141 10 4 236 2 232 1.05e-15 76.6
MS.gene78164.t1 AT4G09920 30.242 248 141 10 4 236 2 232 1.05e-15 76.6
MS.gene78164.t1 AT4G09920 30.242 248 141 10 4 236 2 232 1.05e-15 76.6
MS.gene78164.t1 AT5G22670 33.333 195 112 8 2 191 9 190 1.35e-15 77.4
MS.gene78164.t1 AT5G38396 25.936 374 179 14 4 292 2 362 1.78e-15 77.0
MS.gene78164.t1 AT5G53840 32.632 190 109 6 6 190 20 195 2.53e-15 76.6
MS.gene78164.t1 AT3G58900 32.110 218 121 6 4 212 2 201 3.20e-15 75.5
MS.gene78164.t1 AT3G59150 32.821 195 119 6 4 190 13 203 3.50e-15 76.3
MS.gene78164.t1 AT4G26340 26.844 339 191 13 4 295 2 330 3.53e-15 75.9
MS.gene78164.t1 AT3G58900 32.110 218 121 6 4 212 2 201 3.56e-15 76.3
MS.gene78164.t1 AT3G58900 32.110 218 121 6 4 212 2 201 4.34e-15 75.1
MS.gene78164.t1 AT3G58900 32.110 218 121 6 4 212 2 201 4.34e-15 75.1
MS.gene78164.t1 AT5G22660 31.937 191 118 6 2 190 11 191 4.41e-15 75.9
MS.gene78164.t1 AT2G29930 31.429 210 125 9 2 208 10 203 4.46e-15 75.9
MS.gene78164.t1 AT2G29930 31.429 210 125 9 2 208 10 203 4.46e-15 75.9
MS.gene78164.t1 AT5G22660 31.937 191 118 6 2 190 11 191 4.97e-15 74.7
MS.gene78164.t1 AT5G38392 31.220 205 119 7 4 193 2 199 6.28e-15 73.2
MS.gene78164.t1 AT1G32020 30.872 149 85 5 1 142 1 138 6.65e-15 72.0
MS.gene78164.t1 AT2G42720 35.354 198 114 8 4 192 2 194 6.88e-15 75.1
MS.gene78164.t1 AT3G58940 27.273 352 180 15 4 291 2 341 7.03e-15 75.5
MS.gene78164.t1 AT3G58940 27.273 352 180 15 4 291 2 341 7.03e-15 75.5
MS.gene78164.t1 AT1G78760 28.500 200 126 6 3 196 15 203 7.80e-15 75.1
MS.gene78164.t1 AT5G56380 30.542 203 123 5 4 196 2 196 1.54e-14 74.3
MS.gene78164.t1 AT5G56380 30.542 203 123 5 4 196 2 196 1.54e-14 74.3
MS.gene78164.t1 AT5G22700 34.536 194 111 8 4 193 43 224 1.76e-14 74.3
MS.gene78164.t1 AT5G22730 29.167 192 125 6 2 190 26 209 1.87e-14 73.9
MS.gene78164.t1 AT5G22730 29.167 192 125 6 2 190 26 209 1.87e-14 73.9
MS.gene78164.t1 AT5G22700 34.536 194 111 8 4 193 6 187 1.91e-14 73.9
MS.gene78164.t1 AT5G22700 34.536 194 111 8 4 193 6 187 1.91e-14 73.9
MS.gene78164.t1 AT5G22700 34.536 194 111 8 4 193 6 187 1.91e-14 73.9
MS.gene78164.t1 AT5G22700 34.536 194 111 8 4 193 6 187 1.91e-14 73.9
MS.gene78164.t1 AT5G22730 29.167 192 125 6 2 190 26 209 2.07e-14 73.6
MS.gene78164.t1 AT5G53635 27.807 187 124 4 5 188 1 179 2.30e-14 73.6
MS.gene78164.t1 AT4G13960 25.613 367 184 12 4 293 2 356 2.34e-14 73.6
MS.gene78164.t1 AT4G13960 25.613 367 184 12 4 293 2 356 2.34e-14 73.6
MS.gene78164.t1 AT5G41630 34.634 205 111 8 2 190 10 207 2.92e-14 73.6
MS.gene78164.t1 AT2G29910 28.934 197 128 6 2 196 3 189 3.47e-14 72.8
MS.gene78164.t1 AT2G29910 28.934 197 128 6 2 196 3 189 3.47e-14 72.8
MS.gene78164.t1 AT2G29910 28.934 197 128 6 2 196 3 189 3.47e-14 72.8
MS.gene78164.t1 AT2G29910 28.934 197 128 6 2 196 3 189 3.47e-14 72.8
MS.gene78164.t1 AT1G78840 30.928 194 118 7 3 193 4 184 3.71e-14 73.2
MS.gene78164.t1 AT1G78840 30.928 194 118 7 3 193 4 184 3.71e-14 73.2
MS.gene78164.t1 AT2G29910 28.934 197 128 6 2 196 3 189 4.42e-14 72.4
MS.gene78164.t1 AT2G29910 28.934 197 128 6 2 196 3 189 4.42e-14 72.4
MS.gene78164.t1 AT2G29910 28.934 197 128 6 2 196 27 213 5.21e-14 72.4
MS.gene78164.t1 AT1G64540 30.380 237 126 11 3 232 4 208 5.44e-14 72.4
MS.gene78164.t1 AT1G64540 30.380 237 126 11 3 232 4 208 5.44e-14 72.4
MS.gene78164.t1 AT5G22610 27.041 196 133 3 3 193 17 207 6.26e-14 72.4
MS.gene78164.t1 AT5G53640 28.125 192 124 5 1 190 19 198 7.48e-14 70.1
MS.gene78164.t1 AT5G22610 27.041 196 133 3 3 193 17 207 8.05e-14 72.4
MS.gene78164.t1 AT5G56440 30.526 190 122 5 4 190 2 184 8.18e-14 72.0
MS.gene78164.t1 AT5G25850 31.472 197 118 7 6 199 22 204 1.25e-13 71.6
MS.gene78164.t1 AT1G32375 24.709 344 186 11 4 289 2 330 1.51e-13 71.2
MS.gene78164.t1 AT1G32375 24.709 344 186 11 4 289 2 330 1.51e-13 71.2
MS.gene78164.t1 AT3G03030 30.500 200 115 5 4 188 2 192 1.62e-13 71.2
MS.gene78164.t1 AT3G03030 30.500 200 115 5 4 188 2 192 1.79e-13 70.5
MS.gene78164.t1 AT4G13965 32.292 192 122 5 4 195 10 193 2.00e-13 70.9
MS.gene78164.t1 AT5G56690 30.000 190 124 5 6 190 4 189 2.03e-13 70.9
MS.gene78164.t1 AT3G28410 28.947 190 116 5 2 188 26 199 2.08e-13 70.9
MS.gene78164.t1 AT3G59000 32.584 178 93 6 4 164 2 169 2.43e-13 70.9
MS.gene78164.t1 AT3G26922 31.217 189 122 5 3 190 13 194 2.96e-13 69.7
MS.gene78164.t1 AT3G26922 31.217 189 122 5 3 190 13 194 2.96e-13 69.7
MS.gene78164.t1 AT4G00315 29.688 192 125 6 4 190 2 188 3.54e-13 70.1
MS.gene78164.t1 AT3G58960 27.861 201 127 5 4 196 2 192 4.26e-13 70.1
MS.gene78164.t1 AT5G25860 27.358 212 128 6 2 193 10 215 4.56e-13 69.7
MS.gene78164.t1 AT5G56410 29.703 202 112 7 11 190 10 203 4.74e-13 69.7
MS.gene78164.t1 AT2G42730 29.648 199 130 7 2 192 3 199 6.29e-13 69.3
MS.gene78164.t1 AT5G60610 29.592 196 111 6 4 190 2 179 8.18e-13 68.9
MS.gene78164.t1 AT5G60610 29.592 196 111 6 4 190 2 179 8.18e-13 68.9
MS.gene78164.t1 AT5G56370 26.286 350 191 11 4 302 2 335 8.24e-13 68.9
MS.gene78164.t1 AT5G56370 26.286 350 191 11 4 302 2 335 8.24e-13 68.9
MS.gene78164.t1 AT4G15060 29.703 202 133 5 4 201 26 222 8.82e-13 68.9
MS.gene78164.t1 AT4G15060 29.703 202 133 5 4 201 172 368 1.18e-12 68.9
MS.gene78164.t1 AT5G56370 31.217 189 112 5 4 186 2 178 1.32e-12 67.8
MS.gene78164.t1 AT3G44090 28.097 331 176 13 9 290 29 346 1.59e-12 68.2
MS.gene78164.t1 AT4G26350 30.208 192 121 6 4 191 2 184 1.88e-12 67.8
MS.gene78164.t1 AT1G55660 28.947 190 129 4 4 190 53 239 1.90e-12 68.2
MS.gene78164.t1 AT2G04230 32.323 198 119 7 1 190 10 200 2.27e-12 67.8
MS.gene78164.t1 AT1G55660 28.947 190 129 4 4 190 53 239 2.53e-12 67.4
MS.gene78164.t1 AT5G44940 29.814 322 166 15 4 295 5 296 3.72e-12 67.0
MS.gene78164.t1 AT1G80470 25.862 348 183 13 4 287 15 351 4.40e-12 67.0
MS.gene78164.t1 AT3G52680 30.052 193 121 5 1 188 18 201 4.51e-12 67.0
MS.gene78164.t1 AT5G44490 25.654 191 130 5 3 188 16 199 4.53e-12 67.0
MS.gene78164.t1 AT5G44490 25.654 191 130 5 3 188 16 199 4.84e-12 66.6
MS.gene78164.t1 AT1G66310 29.688 192 114 7 4 188 19 196 4.94e-12 66.6
MS.gene78164.t1 AT3G59000 28.700 223 118 7 4 193 2 216 5.02e-12 66.2
MS.gene78164.t1 AT1G66300 26.582 316 182 15 4 288 29 325 5.32e-12 66.6
MS.gene78164.t1 AT3G52680 30.052 193 121 5 1 188 18 201 5.61e-12 66.2
MS.gene78164.t1 AT5G27750 23.509 285 181 9 4 266 5 274 6.65e-12 66.2
MS.gene78164.t1 AT4G22280 26.374 273 165 11 4 253 2 261 7.82e-12 65.5
MS.gene78164.t1 AT4G22280 26.374 273 165 11 4 253 2 261 8.07e-12 65.9
MS.gene78164.t1 AT3G56780 29.787 188 118 6 6 190 9 185 8.99e-12 65.9
MS.gene78164.t1 AT3G56780 29.787 188 118 6 6 190 9 185 9.24e-12 65.9
MS.gene78164.t1 AT5G27750 23.509 285 181 9 4 266 5 274 9.27e-12 65.5
MS.gene78164.t1 AT3G56780 26.481 287 175 10 6 289 9 262 1.00e-11 65.9
MS.gene78164.t1 AT1G66290 27.419 186 119 5 4 186 29 201 1.05e-11 65.9
MS.gene78164.t1 AT3G58930 30.332 211 121 8 4 196 2 204 1.19e-11 65.5
MS.gene78164.t1 AT3G58930 30.332 211 121 8 4 196 2 204 1.19e-11 65.5
MS.gene78164.t1 AT3G58930 30.332 211 121 8 4 196 2 204 1.19e-11 65.5
MS.gene78164.t1 AT5G38590 32.877 146 91 4 4 148 2 141 1.52e-11 64.3
MS.gene78164.t1 AT1G52650 30.000 240 137 10 4 233 2 220 1.60e-11 65.1
MS.gene78164.t1 AT1G13780 25.524 286 168 11 4 266 10 273 1.73e-11 65.1
MS.gene78164.t1 AT1G13780 25.524 286 168 11 4 266 10 273 1.95e-11 64.3
MS.gene78164.t1 AT1G78730 25.641 195 104 5 4 190 22 183 2.00e-11 64.7
MS.gene78164.t1 AT5G18770 29.381 194 128 7 2 191 22 210 2.40e-11 64.7
MS.gene78164.t1 AT5G18770 28.866 194 129 6 2 191 22 210 3.34e-11 63.9
MS.gene78164.t1 AT3G50710 29.534 193 123 4 4 190 2 187 4.34e-11 63.9
MS.gene78164.t1 AT2G27505 29.648 199 108 8 13 188 1 190 6.00e-11 62.8
MS.gene78164.t1 AT5G02700 27.368 190 119 5 2 188 25 198 6.30e-11 63.5
MS.gene78164.t1 AT3G54160 31.387 137 90 2 57 190 41 176 7.81e-11 63.2
MS.gene78164.t1 AT5G56420 25.526 333 195 13 3 289 5 330 8.28e-11 62.8
MS.gene78164.t1 AT5G56420 25.526 333 195 13 3 289 5 330 8.28e-11 62.8
MS.gene78164.t1 AT5G56420 25.526 333 195 13 3 289 5 330 8.28e-11 62.8

Find 57 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTCCCATTAAAAGTTTC+AGG 0.163816 2.3:-35652703 MS.gene78164:CDS
CTGGCTTTCTGTTCTCGTTT+TGG 0.188460 2.3:-35652813 MS.gene78164:CDS
TTTACTCTTTGAATTGTCTT+TGG 0.280518 2.3:-35652036 MS.gene78164:CDS
AGCGGGATGTCCAATTCTTC+AGG 0.322838 2.3:-35652393 MS.gene78164:CDS
ACATAAAATCTTCATATGTT+TGG 0.331053 2.3:+35652423 None:intergenic
ATGTGGGTCTTTCAGTATGA+TGG 0.342525 2.3:+35652781 None:intergenic
AACAATCCAACTGCTTCATT+TGG 0.346957 2.3:-35651562 MS.gene78164:CDS
CCAAGAGGTGGAAATTTCTC+TGG 0.349801 2.3:-35652832 MS.gene78164:CDS
TTTCCACCTCTTGGAAAGAA+TGG 0.365485 2.3:+35652841 None:intergenic
ACGAGTAATTCCTGAAGAAT+TGG 0.365841 2.3:+35652383 None:intergenic
AAGGGTTCTGCAGCTAAATA+TGG 0.368251 2.3:+35652544 None:intergenic
TTTGAGCGACGGAAGAACTA+TGG 0.382012 2.3:+35652472 None:intergenic
CCAGAGAAATTTCCACCTCT+TGG 0.384238 2.3:+35652832 None:intergenic
TCCGTGTTGACGATATTGTT+TGG 0.390594 2.3:-35652583 MS.gene78164:CDS
CATCACAATCTTCACGTTCA+TGG 0.407287 2.3:-35652659 MS.gene78164:CDS
AATCCAACTGCTTCATTTGG+TGG 0.427140 2.3:-35651559 MS.gene78164:CDS
AGTATAAGCTCTTGCAGCCT+AGG 0.438423 2.3:+35651983 None:intergenic
TGTGGGTCTTTCAGTATGAT+GGG 0.440996 2.3:+35652782 None:intergenic
TTGCTTCCGTCAATTTAGTT+AGG 0.442404 2.3:+35652300 None:intergenic
AATTTCTATGCCCTAGCAAA+TGG 0.443267 2.3:-35652334 MS.gene78164:CDS
ACGTTCATGGTCTCGACAAA+TGG 0.446205 2.3:-35652646 MS.gene78164:CDS
CTTTAGCCTAACTAAATTGA+CGG 0.452720 2.3:-35652306 MS.gene78164:CDS
CTGATATATCATTTGAGCCT+GGG 0.472428 2.3:-35652358 MS.gene78164:CDS
ATGTGACACAAAATCTCGTC+TGG 0.482269 2.3:+35652902 None:intergenic
CAACATCAATTCTCAAAGAC+TGG 0.484998 2.3:+35652222 None:intergenic
TCAAAGAGTAAAGGTGCAGT+TGG 0.486116 2.3:+35652047 None:intergenic
TGAGAAAATTTCAATGGCAA+AGG 0.486293 2.3:-35652942 None:intergenic
CTGCAGCTAAATATGGTAGT+AGG 0.504563 2.3:+35652551 None:intergenic
CAAATTATGAAAGGTGGGAA+TGG 0.513066 2.3:+35652072 None:intergenic
TCTGATATATCATTTGAGCC+TGG 0.521512 2.3:-35652359 MS.gene78164:CDS
AAACCACCAAATGAAGCAGT+TGG 0.537942 2.3:+35651556 None:intergenic
CAAAGAGTAAAGGTGCAGTT+GGG 0.538732 2.3:+35652048 None:intergenic
CAACCATTCTTTCCAAGAGG+TGG 0.540887 2.3:-35652844 MS.gene78164:CDS
TTAAAGAGAACATTGGTATG+TGG 0.547624 2.3:+35652764 None:intergenic
CCTCTTGGAAAGAATGGTTG+TGG 0.551454 2.3:+35652847 None:intergenic
AAAGACAATTCAAAGAGTAA+AGG 0.551781 2.3:+35652038 None:intergenic
AAGTACTCAAACACTGCCCT+AGG 0.560646 2.3:-35652000 MS.gene78164:CDS
GAATTATAAGTTTCAAACGA+AGG 0.562003 2.3:+35652447 None:intergenic
GTATAAGCTCTTGCAGCCTA+GGG 0.563408 2.3:+35651984 None:intergenic
TGGGTCAAATTATGAAAGGT+GGG 0.566466 2.3:+35652067 None:intergenic
TAAAGAGAACATTGGTATGT+GGG 0.572164 2.3:+35652765 None:intergenic
GCAAGAGCTTATACTTGCTG+AGG 0.572971 2.3:-35651975 MS.gene78164:intron
AATTGATGTTGAACTTTGCA+AGG 0.576409 2.3:-35652210 MS.gene78164:intron
CTAGGGCATAGAAATTCCCC+AGG 0.580455 2.3:+35652341 None:intergenic
TTGGGTCAAATTATGAAAGG+TGG 0.588024 2.3:+35652066 None:intergenic
CCACAACCATTCTTTCCAAG+AGG 0.589842 2.3:-35652847 MS.gene78164:CDS
TGATATATCATTTGAGCCTG+GGG 0.591639 2.3:-35652357 MS.gene78164:CDS
TTTGAACGAGAACGTTGTCT+CGG 0.617352 2.3:-35651536 MS.gene78164:CDS
CAGTTGGGTCAAATTATGAA+AGG 0.627965 2.3:+35652063 None:intergenic
AAAGTCGTTAAAGAGAACAT+TGG 0.633562 2.3:+35652757 None:intergenic
CGACAAATGGATCAACATTG+TGG 0.643321 2.3:-35652633 MS.gene78164:CDS
AAGATAGTTCTAGATTCACA+AGG 0.643683 2.3:+35652525 None:intergenic
ATCTCGAGAGAGCAAAACAA+AGG 0.645012 2.3:+35652730 None:intergenic
TCCAAACAATATCGTCAACA+CGG 0.667084 2.3:+35652582 None:intergenic
ACATTGCGAAGCACTTCCAA+CGG 0.668898 2.3:+35652245 None:intergenic
GTGGGTCTTTCAGTATGATG+GGG 0.672087 2.3:+35652783 None:intergenic
AGATAGTTCTAGATTCACAA+GGG 0.698691 2.3:+35652526 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAAAAACATAAAGG+TGG + chr2.3:35652531-35652550 None:intergenic 15.0%
!! TAAAATAAAAACATAAAGGT+GGG + chr2.3:35652530-35652549 None:intergenic 15.0%
!!! TTATATTTTTCTTAACAGAT+TGG - chr2.3:35652552-35652571 MS.gene78164:CDS 15.0%
!!! TTTTCTTTTTGCATATTATT+AGG - chr2.3:35652342-35652361 MS.gene78164:CDS 15.0%
!! ACATAAAATCTTCATATGTT+TGG + chr2.3:35652023-35652042 None:intergenic 20.0%
!! ATATGCAAAAAGAAAACAAA+AGG + chr2.3:35652338-35652357 None:intergenic 20.0%
!!! AGATTTTATGTTACTTTTAG+CGG - chr2.3:35652032-35652051 MS.gene78164:CDS 20.0%
! AAACAAAAGGTTAGAAATCA+AGG + chr2.3:35652325-35652344 None:intergenic 25.0%
! AAAGACAATTCAAAGAGTAA+AGG + chr2.3:35652408-35652427 None:intergenic 25.0%
! AACTATAACTACTACTTACA+TGG + chr2.3:35652831-35652850 None:intergenic 25.0%
! GAATTATAAGTTTCAAACGA+AGG + chr2.3:35651999-35652018 None:intergenic 25.0%
! GATAATATACTTTCTACTTC+GGG + chr2.3:35652759-35652778 None:intergenic 25.0%
! GGATAATATACTTTCTACTT+CGG + chr2.3:35652760-35652779 None:intergenic 25.0%
! TGTCAACTTACATTTAATCA+TGG - chr2.3:35652804-35652823 MS.gene78164:CDS 25.0%
! TGTTGAAGCAACTAAATAAA+AGG + chr2.3:35652865-35652884 None:intergenic 25.0%
! TTTACTCTTTGAATTGTCTT+TGG - chr2.3:35652407-35652426 MS.gene78164:CDS 25.0%
!! TTTTCATTTTCATTTTCCGT+TGG - chr2.3:35652182-35652201 MS.gene78164:intron 25.0%
!!! ATCTAGAACTATCTTCTTTT+AGG - chr2.3:35651926-35651945 MS.gene78164:intron 25.0%
!!! GATTTTATGTTACTTTTAGC+GGG - chr2.3:35652033-35652052 MS.gene78164:CDS 25.0%
!!! TAAAGTTTTTCCATTTGCTA+GGG + chr2.3:35652122-35652141 None:intergenic 25.0%
!!! TATTTTTTTCCCTTCCTTTT+AGG - chr2.3:35652292-35652311 MS.gene78164:CDS 25.0%
!!! TCTAGAACTATCTTCTTTTA+GGG - chr2.3:35651927-35651946 MS.gene78164:intron 25.0%
AAAGTCGTTAAAGAGAACAT+TGG + chr2.3:35651689-35651708 None:intergenic 30.0%
AATTGATGTTGAACTTTGCA+AGG - chr2.3:35652233-35652252 MS.gene78164:CDS 30.0%
ATCAAGGTAAAACTCCTAAA+AGG + chr2.3:35652309-35652328 None:intergenic 30.0%
CTTTAGCCTAACTAAATTGA+CGG - chr2.3:35652137-35652156 MS.gene78164:intron 30.0%
GAAGCAACTAAATAAAAGGA+AGG + chr2.3:35652861-35652880 None:intergenic 30.0%
TAAAGAGAACATTGGTATGT+GGG + chr2.3:35651681-35651700 None:intergenic 30.0%
TATATTATCCTCATGTCCAA+GGG - chr2.3:35652770-35652789 MS.gene78164:CDS 30.0%
TTAAAGAGAACATTGGTATG+TGG + chr2.3:35651682-35651701 None:intergenic 30.0%
! AAGATCTAAGGTGTAATGAA+AGG + chr2.3:35652629-35652648 None:intergenic 30.0%
! CTAAAGTTTTTCCATTTGCT+AGG + chr2.3:35652123-35652142 None:intergenic 30.0%
! TCAAGCCTGAAACTTTTAAT+GGG + chr2.3:35651748-35651767 None:intergenic 30.0%
!! AAGATAGTTCTAGATTCACA+AGG + chr2.3:35651921-35651940 None:intergenic 30.0%
!! AGATAGTTCTAGATTCACAA+GGG + chr2.3:35651920-35651939 None:intergenic 30.0%
!!! AAAAGCATTGTTCAGTTTTG+AGG + chr2.3:35651576-35651595 None:intergenic 30.0%
AACAATCCAACTGCTTCATT+TGG - chr2.3:35652881-35652900 MS.gene78164:CDS 35.0%
AATTTCTATGCCCTAGCAAA+TGG - chr2.3:35652109-35652128 MS.gene78164:intron 35.0%
ACGAGTAATTCCTGAAGAAT+TGG + chr2.3:35652063-35652082 None:intergenic 35.0%
AGGTAAAACTCCTAAAAGGA+AGG + chr2.3:35652305-35652324 None:intergenic 35.0%
CAAATTATGAAAGGTGGGAA+TGG + chr2.3:35652374-35652393 None:intergenic 35.0%
CAACATCAATTCTCAAAGAC+TGG + chr2.3:35652224-35652243 None:intergenic 35.0%
CACTTCCCATTAAAAGTTTC+AGG - chr2.3:35651740-35651759 MS.gene78164:intron 35.0%
CAGTTGGGTCAAATTATGAA+AGG + chr2.3:35652383-35652402 None:intergenic 35.0%
CTAAAAGATCGCAAGATCTA+AGG + chr2.3:35652641-35652660 None:intergenic 35.0%
CTGATATATCATTTGAGCCT+GGG - chr2.3:35652085-35652104 MS.gene78164:intron 35.0%
GAACATAGGAGAAAAACGTT+GGG - chr2.3:35652578-35652597 MS.gene78164:CDS 35.0%
GGTAAAACTCCTAAAAGGAA+GGG + chr2.3:35652304-35652323 None:intergenic 35.0%
GTATATTATCCTCATGTCCA+AGG - chr2.3:35652769-35652788 MS.gene78164:CDS 35.0%
TCCAAACAATATCGTCAACA+CGG + chr2.3:35651864-35651883 None:intergenic 35.0%
TCTGATATATCATTTGAGCC+TGG - chr2.3:35652084-35652103 MS.gene78164:intron 35.0%
TGAACATAGGAGAAAAACGT+TGG - chr2.3:35652577-35652596 MS.gene78164:CDS 35.0%
TGATATATCATTTGAGCCTG+GGG - chr2.3:35652086-35652105 MS.gene78164:intron 35.0%
TGGGTCAAATTATGAAAGGT+GGG + chr2.3:35652379-35652398 None:intergenic 35.0%
TTGCTTCCGTCAATTTAGTT+AGG + chr2.3:35652146-35652165 None:intergenic 35.0%
TTGGGTCAAATTATGAAAGG+TGG + chr2.3:35652380-35652399 None:intergenic 35.0%
TTTACAAACCATGACAGTCT+GGG - chr2.3:35652722-35652741 MS.gene78164:CDS 35.0%
! CTTAGATCTTGCGATCTTTT+AGG - chr2.3:35652639-35652658 MS.gene78164:CDS 35.0%
! GAAACTTTTAATGGGAAGTG+CGG + chr2.3:35651740-35651759 None:intergenic 35.0%
! GTCAAGCCTGAAACTTTTAA+TGG + chr2.3:35651749-35651768 None:intergenic 35.0%
! TTTTACAAACCATGACAGTC+TGG - chr2.3:35652721-35652740 MS.gene78164:CDS 35.0%
!! ATACTTGCTGAGGTTTGTTA+AGG - chr2.3:35652478-35652497 MS.gene78164:CDS 35.0%
!! TAACAGATTGGCTTGAACAT+AGG - chr2.3:35652564-35652583 MS.gene78164:CDS 35.0%
!! TTAGGCTTGTTAAGCCTAAA+AGG - chr2.3:35652657-35652676 MS.gene78164:CDS 35.0%
AAACCACCAAATGAAGCAGT+TGG + chr2.3:35652890-35652909 None:intergenic 40.0%
AAGGGTTCTGCAGCTAAATA+TGG + chr2.3:35651902-35651921 None:intergenic 40.0%
AATCCAACTGCTTCATTTGG+TGG - chr2.3:35652884-35652903 MS.gene78164:CDS 40.0%
ATCTCGAGAGAGCAAAACAA+AGG + chr2.3:35651716-35651735 None:intergenic 40.0%
ATGTGACACAAAATCTCGTC+TGG + chr2.3:35651544-35651563 None:intergenic 40.0%
ATGTGGGTCTTTCAGTATGA+TGG + chr2.3:35651665-35651684 None:intergenic 40.0%
CATCACAATCTTCACGTTCA+TGG - chr2.3:35651784-35651803 MS.gene78164:intron 40.0%
CGACAAATGGATCAACATTG+TGG - chr2.3:35651810-35651829 MS.gene78164:intron 40.0%
CTGCAGCTAAATATGGTAGT+AGG + chr2.3:35651895-35651914 None:intergenic 40.0%
CTTGTTAAGCCTAAAAGGTG+AGG - chr2.3:35652662-35652681 MS.gene78164:CDS 40.0%
GGCATTGCGGAACATAATTT+GGG + chr2.3:35652608-35652627 None:intergenic 40.0%
TGTCTCGGAGAAAAAGTTGA+GGG - chr2.3:35652922-35652941 MS.gene78164:CDS 40.0%
TGTGGGTCTTTCAGTATGAT+GGG + chr2.3:35651664-35651683 None:intergenic 40.0%
TTGTCTCGGAGAAAAAGTTG+AGG - chr2.3:35652921-35652940 MS.gene78164:CDS 40.0%
TTTCCACCTCTTGGAAAGAA+TGG + chr2.3:35651605-35651624 None:intergenic 40.0%
TTTGAACGAGAACGTTGTCT+CGG - chr2.3:35652907-35652926 MS.gene78164:CDS 40.0%
! AAACGAAGGATTTTGAGCGA+CGG + chr2.3:35651985-35652004 None:intergenic 40.0%
! AGGCATTGCGGAACATAATT+TGG + chr2.3:35652609-35652628 None:intergenic 40.0%
! CAAAGAGTAAAGGTGCAGTT+GGG + chr2.3:35652398-35652417 None:intergenic 40.0%
! TCAAAGAGTAAAGGTGCAGT+TGG + chr2.3:35652399-35652418 None:intergenic 40.0%
! TCCGTGTTGACGATATTGTT+TGG - chr2.3:35651860-35651879 MS.gene78164:intron 40.0%
!! AGGTGTAATGAAAGGCATTG+CGG + chr2.3:35652621-35652640 None:intergenic 40.0%
!!! ACTATCTTCTTTTAGGGCTG+AGG - chr2.3:35651933-35651952 MS.gene78164:intron 40.0%
AAGCCTAAAAGGTGAGGTTC+TGG - chr2.3:35652668-35652687 MS.gene78164:CDS 45.0%
AAGTACTCAAACACTGCCCT+AGG - chr2.3:35652443-35652462 MS.gene78164:CDS 45.0%
ACGTTCATGGTCTCGACAAA+TGG - chr2.3:35651797-35651816 MS.gene78164:intron 45.0%
AGTATAAGCTCTTGCAGCCT+AGG + chr2.3:35652463-35652482 None:intergenic 45.0%
CAACCATTCTTTCCAAGAGG+TGG - chr2.3:35651599-35651618 MS.gene78164:intron 45.0%
CATAGGAGAAAAACGTTGGG+TGG - chr2.3:35652581-35652600 MS.gene78164:CDS 45.0%
CCAAGAGGTGGAAATTTCTC+TGG - chr2.3:35651611-35651630 MS.gene78164:intron 45.0%
CCACAACCATTCTTTCCAAG+AGG - chr2.3:35651596-35651615 MS.gene78164:intron 45.0%
CCAGAGAAATTTCCACCTCT+TGG + chr2.3:35651614-35651633 None:intergenic 45.0%
CCTCTTGGAAAGAATGGTTG+TGG + chr2.3:35651599-35651618 None:intergenic 45.0%
GTATAAGCTCTTGCAGCCTA+GGG + chr2.3:35652462-35652481 None:intergenic 45.0%
GTGGGTCTTTCAGTATGATG+GGG + chr2.3:35651663-35651682 None:intergenic 45.0%
TTCATTGTCCCAGACTGTCA+TGG + chr2.3:35652733-35652752 None:intergenic 45.0%
TTTGAGCGACGGAAGAACTA+TGG + chr2.3:35651974-35651993 None:intergenic 45.0%
! ACATTGCGAAGCACTTCCAA+CGG + chr2.3:35652201-35652220 None:intergenic 45.0%
! CTACCAGAACCTCACCTTTT+AGG + chr2.3:35652674-35652693 None:intergenic 45.0%
! GCAAGAGCTTATACTTGCTG+AGG - chr2.3:35652468-35652487 MS.gene78164:CDS 45.0%
!! CTGGCTTTCTGTTCTCGTTT+TGG - chr2.3:35651630-35651649 MS.gene78164:intron 45.0%
!!! CTTCTTTTAGGGCTGAGGAT+AGG - chr2.3:35651938-35651957 MS.gene78164:intron 45.0%
!! AAAATAAAATAAAAACATAA+AGG + chr2.3:35652534-35652553 None:intergenic 5.0%
AGCGGGATGTCCAATTCTTC+AGG - chr2.3:35652050-35652069 MS.gene78164:CDS 50.0%
CTAGGGCATAGAAATTCCCC+AGG + chr2.3:35652105-35652124 None:intergenic 50.0%
TGAAGAAGCCCTTGGACATG+AGG + chr2.3:35652781-35652800 None:intergenic 50.0%
TGACACGTTGAAGAAGCCCT+TGG + chr2.3:35652789-35652808 None:intergenic 50.0%
! AAGGTGAGGTTCTGGTAGCA+AGG - chr2.3:35652676-35652695 MS.gene78164:CDS 50.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 35651514 35652951 35651514 ID=MS.gene78164
chr2.3 mRNA 35651514 35652951 35651514 ID=MS.gene78164.t1;Parent=MS.gene78164
chr2.3 exon 35652211 35652951 35652211 ID=MS.gene78164.t1.exon1;Parent=MS.gene78164.t1
chr2.3 CDS 35652211 35652951 35652211 ID=cds.MS.gene78164.t1;Parent=MS.gene78164.t1
chr2.3 exon 35651976 35652101 35651976 ID=MS.gene78164.t1.exon2;Parent=MS.gene78164.t1
chr2.3 CDS 35651976 35652101 35651976 ID=cds.MS.gene78164.t1;Parent=MS.gene78164.t1
chr2.3 exon 35651514 35651591 35651514 ID=MS.gene78164.t1.exon3;Parent=MS.gene78164.t1
chr2.3 CDS 35651514 35651591 35651514 ID=cds.MS.gene78164.t1;Parent=MS.gene78164.t1
Gene Sequence

>MS.gene78164

ATGGCAAAGGATATAATAAGCACTTTACCAGACGAGATTTTGTGTCACATTATCTCTTTCCTCAAAACTGAACAATGCTTTTCCACAACCATTCTTTCCAAGAGGTGGAAATTTCTCTGGCTTTCTGTTCTCGTTTTGGACTTCAGCCCCATCATACTGAAAGACCCACATACCAATGTTCTCTTTAACGACTTTGTATCCTTTGTTTTGCTCTCTCGAGATTCCGCACTTCCCATTAAAAGTTTCAGGCTTGACGTTGATGCTCTTGAACATCACAATCTTCACGTTCATGGTCTCGACAAATGGATCAACATTGTGGTACAACGCAGTGTTGAACATATTGATCTCCGTGTTGACGATATTGTTTGGACTAAATTGCCTACTACCATATTTAGCTGCAGAACCCTTGTGAATCTAGAACTATCTTCTTTTAGGGCTGAGGATAGGTTTTCTTCTGCCATAGTTCTTCCGTCGCTCAAAATCCTTCGTTTGAAACTTATAATTCTCCAAACATATGAAGATTTTATGTTACTTTTAGCGGGATGTCCAATTCTTCAGGAATTACTCGTATCTGATATATCATTTGAGCCTGGGGAATTTCTATGCCCTAGCAAATGGAAAAACTTTAGCCTAACTAAATTGACGGAAGCAAATGTTGATTTCTTTTATTTTCATTTTCATTTTCCGTTGGAAGTGCTTCGCAATGTCCAGTCTTTGAGAATTGATGTTGAACTTTGCAAGGTTTGATTTTATATATAAAAAAATTATTGATTTTTATTATTTTTTTCCCTTCCTTTTAGGAGTTTTACCTTGATTTCTAACCTTTTGTTTTCTTTTTGCATATTATTAGGAGTATTCCATTCCCACCTTTCATAATTTGACCCAACTGCACCTTTACTCTTTGAATTGTCTTTGGCATCTCTTTGTTGAAGTACTCAAACACTGCCCTAGGCTGCAAGAGCTTATACTTGCTGAGGTTTGTTAAGGAACATATATGTTTTATCTTTTCATAGCCCACCTTTATGTTTTTATTTTATTTTATATTTTTCTTAACAGATTGGCTTGAACATAGGAGAAAAACGTTGGGTGGACCCAAATTATGTTCCGCAATGCCTTTCATTACACCTTAGATCTTGCGATCTTTTAGGCTTGTTAAGCCTAAAAGGTGAGGTTCTGGTAGCAAGGTATATTTTGAAGAATGCGAGAGTTTTACAAACCATGACAGTCTGGGACAATGAACATCCCGAAGTAGAAAGTATATTATCCTCATGTCCAAGGGCTTCTTCAACGTGTCAACTTACATTTAATCATGGTCCATGTAAGTAGTAGTTATAGTTACTCTCTCCTTCCTTTTATTTAGTTGCTTCAACAATCCAACTGCTTCATTTGGTGGTTTGAACGAGAACGTTGTCTCGGAGAAAAAGTTGAGGGAAAGTGA

Protein sequence

>MS.gene78164.t1

MAKDIISTLPDEILCHIISFLKTEQCFSTTILSKRWKFLWLSVLVLDFSPIILKDPHTNVLFNDFVSFVLLSRDSALPIKSFRLDVDALEHHNLHVHGLDKWINIVVQRSVEHIDLRVDDIVWTKLPTTIFSCRTLVNLELSSFRAEDRFSSAIVLPSLKILRLKLIILQTYEDFMLLLAGCPILQELLVSDISFEPGEFLCPSKWKNFSLTKLTEANVDFFYFHFHFPLEVLRNVQSLRIDVELCKEYSIPTFHNLTQLHLYSLNCLWHLFVEVLKHCPRLQELILAELLQQSNCFIWWFERERCLGEKVEGK