Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54959.t1 | PNY06254.1 | 55.4 | 341 | 136 | 6 | 15 | 354 | 11 | 336 | 1.00E-86 | 330.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54959.t1 | Q9ZV93 | 28.1 | 399 | 193 | 16 | 2 | 341 | 3 | 366 | 1.1e-17 | 92.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54959.t1 | A0A2K3NT89 | 55.4 | 341 | 136 | 6 | 15 | 354 | 11 | 336 | 7.3e-87 | 330.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54959.t1 | MTR_2g007450 | 51.873 | 347 | 147 | 7 | 1 | 345 | 1 | 329 | 7.37e-104 | 312 |
MS.gene54959.t1 | MTR_7g083740 | 51.594 | 345 | 91 | 8 | 3 | 345 | 2 | 272 | 4.19e-96 | 291 |
MS.gene54959.t1 | MTR_1g053025 | 49.697 | 330 | 134 | 8 | 17 | 345 | 1 | 299 | 5.80e-87 | 268 |
MS.gene54959.t1 | MTR_3g026920 | 47.619 | 336 | 136 | 10 | 16 | 344 | 17 | 319 | 5.47e-76 | 240 |
MS.gene54959.t1 | MTR_4g098590 | 45.260 | 327 | 138 | 8 | 20 | 343 | 1 | 289 | 5.69e-74 | 234 |
MS.gene54959.t1 | MTR_2g007500 | 43.988 | 341 | 140 | 8 | 5 | 345 | 3 | 292 | 7.85e-71 | 225 |
MS.gene54959.t1 | MTR_2g007400 | 40.997 | 361 | 163 | 12 | 5 | 359 | 3 | 319 | 2.06e-68 | 221 |
MS.gene54959.t1 | MTR_3g107160 | 40.785 | 331 | 144 | 11 | 18 | 343 | 10 | 293 | 1.03e-63 | 208 |
MS.gene54959.t1 | MTR_1g107385 | 40.356 | 337 | 165 | 7 | 18 | 352 | 32 | 334 | 3.99e-62 | 205 |
MS.gene54959.t1 | MTR_5g083890 | 40.719 | 334 | 164 | 7 | 15 | 345 | 3 | 305 | 2.34e-59 | 200 |
MS.gene54959.t1 | MTR_7g075820 | 38.375 | 357 | 174 | 10 | 15 | 369 | 3 | 315 | 1.60e-58 | 195 |
MS.gene54959.t1 | MTR_2g005990 | 39.403 | 335 | 157 | 10 | 16 | 345 | 4 | 297 | 9.84e-56 | 187 |
MS.gene54959.t1 | MTR_3g107100 | 40.122 | 329 | 148 | 9 | 18 | 343 | 11 | 293 | 4.04e-55 | 186 |
MS.gene54959.t1 | MTR_3g107120 | 40.351 | 342 | 139 | 11 | 18 | 343 | 9 | 301 | 4.15e-54 | 183 |
MS.gene54959.t1 | MTR_2g008320 | 36.705 | 346 | 145 | 13 | 16 | 345 | 50 | 337 | 7.03e-47 | 166 |
MS.gene54959.t1 | MTR_2g008310 | 37.015 | 335 | 153 | 11 | 17 | 345 | 1 | 283 | 3.39e-46 | 162 |
MS.gene54959.t1 | MTR_3g099830 | 37.237 | 333 | 139 | 9 | 16 | 345 | 10 | 275 | 4.21e-46 | 162 |
MS.gene54959.t1 | MTR_2g007360 | 37.500 | 336 | 133 | 8 | 16 | 347 | 10 | 272 | 1.67e-44 | 157 |
MS.gene54959.t1 | MTR_2g007530 | 38.214 | 280 | 122 | 9 | 16 | 255 | 17 | 285 | 2.22e-41 | 148 |
MS.gene54959.t1 | MTR_2g007530 | 53.247 | 77 | 30 | 1 | 272 | 348 | 197 | 267 | 7.39e-14 | 72.4 |
MS.gene54959.t1 | MTR_7g007340 | 35.312 | 337 | 137 | 10 | 12 | 345 | 4 | 262 | 3.61e-36 | 135 |
MS.gene54959.t1 | MTR_2g007550 | 41.176 | 204 | 76 | 7 | 1 | 201 | 1 | 163 | 1.07e-29 | 117 |
MS.gene54959.t1 | MTR_2g007550 | 50.485 | 103 | 50 | 1 | 243 | 345 | 148 | 249 | 1.03e-24 | 103 |
MS.gene54959.t1 | MTR_7g115270 | 29.167 | 336 | 191 | 8 | 15 | 341 | 9 | 306 | 9.16e-28 | 113 |
MS.gene54959.t1 | MTR_6g045333 | 30.882 | 340 | 178 | 11 | 17 | 345 | 60 | 353 | 1.50e-27 | 113 |
MS.gene54959.t1 | MTR_1g041245 | 29.532 | 342 | 173 | 12 | 15 | 345 | 8 | 292 | 3.39e-27 | 111 |
MS.gene54959.t1 | MTR_7g075800 | 30.659 | 349 | 190 | 14 | 15 | 346 | 6 | 319 | 1.48e-26 | 111 |
MS.gene54959.t1 | MTR_3g105060 | 29.607 | 331 | 171 | 9 | 15 | 340 | 11 | 284 | 3.84e-26 | 108 |
MS.gene54959.t1 | MTR_8g085430 | 33.191 | 235 | 118 | 7 | 15 | 242 | 8 | 210 | 4.81e-26 | 107 |
MS.gene54959.t1 | MTR_7g032380 | 28.313 | 332 | 162 | 10 | 15 | 345 | 8 | 264 | 1.33e-25 | 106 |
MS.gene54959.t1 | MTR_7g007370 | 31.928 | 332 | 127 | 11 | 17 | 345 | 16 | 251 | 4.64e-25 | 104 |
MS.gene54959.t1 | MTR_5g073420 | 31.195 | 343 | 168 | 15 | 8 | 341 | 1 | 284 | 4.69e-25 | 105 |
MS.gene54959.t1 | MTR_3g040700 | 29.762 | 336 | 163 | 14 | 17 | 343 | 42 | 313 | 2.74e-23 | 100 |
MS.gene54959.t1 | MTR_3g082890 | 30.055 | 366 | 184 | 11 | 1 | 346 | 1 | 314 | 6.16e-23 | 99.8 |
MS.gene54959.t1 | MTR_7g034115 | 30.259 | 347 | 163 | 14 | 15 | 345 | 8 | 291 | 1.38e-22 | 98.2 |
MS.gene54959.t1 | MTR_5g082930 | 53.398 | 103 | 45 | 2 | 20 | 120 | 17 | 118 | 2.30e-22 | 94.0 |
MS.gene54959.t1 | MTR_3g082890 | 30.137 | 365 | 183 | 11 | 1 | 345 | 81 | 393 | 2.47e-22 | 98.6 |
MS.gene54959.t1 | MTR_1089s0010 | 27.933 | 358 | 200 | 11 | 17 | 369 | 7 | 311 | 3.69e-22 | 97.1 |
MS.gene54959.t1 | MTR_7g098480 | 30.925 | 346 | 172 | 13 | 3 | 341 | 8 | 293 | 4.14e-22 | 97.8 |
MS.gene54959.t1 | MTR_7g026500 | 29.769 | 346 | 195 | 14 | 6 | 345 | 2 | 305 | 8.88e-22 | 96.3 |
MS.gene54959.t1 | MTR_3g071850 | 29.118 | 340 | 184 | 10 | 17 | 345 | 23 | 316 | 1.97e-21 | 96.7 |
MS.gene54959.t1 | MTR_7g098510 | 31.714 | 350 | 170 | 17 | 3 | 343 | 8 | 297 | 3.36e-21 | 94.4 |
MS.gene54959.t1 | MTR_7g032370 | 27.554 | 323 | 157 | 10 | 33 | 345 | 5 | 260 | 1.01e-20 | 92.4 |
MS.gene54959.t1 | MTR_7g033990 | 27.479 | 353 | 178 | 13 | 16 | 354 | 9 | 297 | 1.34e-20 | 92.8 |
MS.gene54959.t1 | MTR_7g056430 | 29.641 | 334 | 157 | 11 | 18 | 345 | 9 | 270 | 1.47e-20 | 94.0 |
MS.gene54959.t1 | MTR_7g056420 | 29.641 | 334 | 157 | 11 | 18 | 345 | 9 | 270 | 1.82e-20 | 93.6 |
MS.gene54959.t1 | MTR_7g098570 | 28.732 | 355 | 175 | 15 | 1 | 341 | 7 | 297 | 4.59e-20 | 91.7 |
MS.gene54959.t1 | MTR_3g108150 | 29.282 | 362 | 174 | 14 | 13 | 354 | 4 | 303 | 6.44e-20 | 90.5 |
MS.gene54959.t1 | MTR_1g108820 | 28.804 | 368 | 198 | 14 | 15 | 369 | 5 | 321 | 6.57e-20 | 90.5 |
MS.gene54959.t1 | MTR_7g007080 | 27.635 | 351 | 171 | 13 | 18 | 348 | 4 | 291 | 8.30e-20 | 90.5 |
MS.gene54959.t1 | MTR_5g073340 | 30.030 | 333 | 156 | 12 | 17 | 343 | 7 | 268 | 1.01e-19 | 89.0 |
MS.gene54959.t1 | MTR_3g467400 | 28.571 | 350 | 188 | 16 | 17 | 345 | 2 | 310 | 1.03e-19 | 89.7 |
MS.gene54959.t1 | MTR_3g036250 | 29.326 | 341 | 166 | 13 | 17 | 347 | 4 | 279 | 1.21e-19 | 89.4 |
MS.gene54959.t1 | MTR_5g058000 | 28.739 | 341 | 169 | 12 | 17 | 345 | 7 | 285 | 1.64e-19 | 89.4 |
MS.gene54959.t1 | MTR_1g108820 | 30.145 | 345 | 178 | 14 | 15 | 346 | 5 | 299 | 1.64e-19 | 89.0 |
MS.gene54959.t1 | MTR_3g107140 | 31.839 | 223 | 114 | 7 | 27 | 241 | 1 | 193 | 3.33e-19 | 85.1 |
MS.gene54959.t1 | MTR_7g056433 | 29.412 | 340 | 182 | 12 | 12 | 343 | 6 | 295 | 4.10e-19 | 88.2 |
MS.gene54959.t1 | MTR_5g045170 | 29.023 | 348 | 168 | 14 | 17 | 345 | 13 | 300 | 4.19e-19 | 88.2 |
MS.gene54959.t1 | MTR_5g058100 | 28.060 | 335 | 189 | 9 | 16 | 345 | 7 | 294 | 5.37e-19 | 87.8 |
MS.gene54959.t1 | MTR_2g007460 | 41.322 | 121 | 50 | 3 | 16 | 136 | 10 | 109 | 1.21e-18 | 81.3 |
MS.gene54959.t1 | MTR_7g055943 | 29.882 | 338 | 179 | 11 | 16 | 345 | 38 | 325 | 4.71e-18 | 85.5 |
MS.gene54959.t1 | MTR_7g034090 | 37.572 | 173 | 79 | 4 | 16 | 184 | 2 | 149 | 4.88e-18 | 85.5 |
MS.gene54959.t1 | MTR_6g022360 | 29.315 | 365 | 183 | 12 | 17 | 369 | 42 | 343 | 9.41e-18 | 84.3 |
MS.gene54959.t1 | MTR_5g045510 | 28.571 | 308 | 172 | 11 | 14 | 321 | 8 | 267 | 1.21e-17 | 84.0 |
MS.gene54959.t1 | MTR_1g066830 | 27.463 | 335 | 187 | 10 | 14 | 339 | 4 | 291 | 1.53e-17 | 83.6 |
MS.gene54959.t1 | MTR_4g134150 | 28.623 | 276 | 136 | 9 | 15 | 286 | 11 | 229 | 1.80e-17 | 81.3 |
MS.gene54959.t1 | MTR_7g056447 | 31.628 | 215 | 111 | 7 | 15 | 228 | 6 | 185 | 3.83e-17 | 81.3 |
MS.gene54959.t1 | MTR_3g023630 | 27.027 | 333 | 176 | 11 | 17 | 340 | 7 | 281 | 5.82e-17 | 81.6 |
MS.gene54959.t1 | MTR_8g445780 | 26.243 | 362 | 198 | 13 | 18 | 341 | 13 | 343 | 6.53e-17 | 81.6 |
MS.gene54959.t1 | MTR_5g073370 | 29.129 | 333 | 182 | 12 | 18 | 345 | 5 | 288 | 7.54e-17 | 81.6 |
MS.gene54959.t1 | MTR_5g031970 | 26.316 | 342 | 151 | 11 | 17 | 346 | 15 | 267 | 7.59e-17 | 81.3 |
MS.gene54959.t1 | MTR_6g011460 | 27.761 | 335 | 185 | 12 | 17 | 345 | 45 | 328 | 8.23e-17 | 81.6 |
MS.gene54959.t1 | MTR_6g040270 | 27.795 | 331 | 183 | 10 | 20 | 345 | 10 | 289 | 1.12e-16 | 80.9 |
MS.gene54959.t1 | MTR_5g061680 | 26.586 | 331 | 165 | 9 | 16 | 341 | 9 | 266 | 1.52e-16 | 80.1 |
MS.gene54959.t1 | MTR_0492s0020 | 26.558 | 369 | 176 | 13 | 3 | 353 | 75 | 366 | 2.92e-16 | 80.1 |
MS.gene54959.t1 | MTR_7g088260 | 27.747 | 364 | 195 | 14 | 18 | 369 | 91 | 398 | 3.06e-16 | 80.1 |
MS.gene54959.t1 | MTR_0543s0010 | 26.558 | 369 | 176 | 13 | 3 | 353 | 75 | 366 | 4.58e-16 | 79.7 |
MS.gene54959.t1 | MTR_6g022500 | 26.409 | 337 | 190 | 12 | 17 | 345 | 100 | 386 | 9.79e-16 | 78.6 |
MS.gene54959.t1 | MTR_8g077460 | 28.652 | 356 | 184 | 14 | 18 | 363 | 10 | 305 | 1.00e-15 | 78.2 |
MS.gene54959.t1 | MTR_7g056280 | 33.166 | 199 | 105 | 7 | 20 | 218 | 8 | 178 | 1.95e-15 | 78.2 |
MS.gene54959.t1 | MTR_5g008920 | 26.113 | 337 | 186 | 10 | 16 | 345 | 10 | 290 | 2.21e-15 | 77.4 |
MS.gene54959.t1 | MTR_8g062010 | 30.472 | 233 | 115 | 10 | 1 | 228 | 1 | 191 | 2.39e-15 | 77.4 |
MS.gene54959.t1 | MTR_6g013160 | 26.562 | 384 | 202 | 12 | 11 | 346 | 2 | 353 | 3.12e-15 | 77.0 |
MS.gene54959.t1 | MTR_7g033470 | 37.607 | 117 | 68 | 2 | 8 | 120 | 4 | 119 | 4.26e-15 | 72.0 |
MS.gene54959.t1 | MTR_5g007410 | 28.402 | 338 | 182 | 14 | 20 | 345 | 28 | 317 | 6.83e-15 | 76.3 |
MS.gene54959.t1 | MTR_1g492880 | 47.727 | 88 | 42 | 2 | 18 | 105 | 6 | 89 | 9.07e-15 | 70.1 |
MS.gene54959.t1 | MTR_1g492880 | 47.727 | 88 | 42 | 2 | 18 | 105 | 6 | 89 | 9.21e-15 | 69.7 |
MS.gene54959.t1 | MTR_5g084070 | 24.611 | 386 | 202 | 12 | 1 | 346 | 1 | 337 | 2.12e-14 | 74.7 |
MS.gene54959.t1 | MTR_2g036470 | 27.168 | 346 | 194 | 11 | 16 | 351 | 12 | 309 | 2.18e-14 | 74.3 |
MS.gene54959.t1 | MTR_7g034110 | 23.684 | 342 | 168 | 10 | 15 | 354 | 8 | 258 | 2.37e-14 | 73.9 |
MS.gene54959.t1 | MTR_1g013560 | 27.731 | 238 | 142 | 9 | 1 | 235 | 1 | 211 | 3.98e-14 | 73.2 |
MS.gene54959.t1 | MTR_8g062080 | 31.855 | 248 | 124 | 13 | 1 | 239 | 6 | 217 | 5.00e-14 | 73.6 |
MS.gene54959.t1 | MTR_1g013560 | 27.731 | 238 | 142 | 9 | 1 | 235 | 1 | 211 | 7.86e-14 | 72.8 |
MS.gene54959.t1 | MTR_8g062310 | 26.809 | 235 | 131 | 7 | 4 | 236 | 11 | 206 | 9.25e-14 | 72.4 |
MS.gene54959.t1 | MTR_8g468760 | 28.251 | 223 | 130 | 8 | 16 | 232 | 7 | 205 | 1.63e-13 | 71.6 |
MS.gene54959.t1 | MTR_8g058970 | 28.916 | 249 | 132 | 10 | 5 | 233 | 6 | 229 | 1.77e-13 | 72.0 |
MS.gene54959.t1 | MTR_2g082800 | 31.915 | 141 | 82 | 4 | 1 | 138 | 9 | 138 | 5.35e-13 | 70.1 |
MS.gene54959.t1 | MTR_1g014450 | 28.311 | 219 | 131 | 7 | 18 | 235 | 16 | 209 | 5.59e-13 | 70.1 |
MS.gene54959.t1 | MTR_7g114710 | 26.627 | 338 | 161 | 13 | 15 | 343 | 10 | 269 | 5.82e-13 | 69.7 |
MS.gene54959.t1 | MTR_6g029350 | 38.583 | 127 | 58 | 3 | 219 | 345 | 1 | 107 | 5.98e-13 | 68.2 |
MS.gene54959.t1 | MTR_2g091145 | 26.809 | 235 | 145 | 7 | 1 | 233 | 3 | 212 | 7.17e-13 | 69.7 |
MS.gene54959.t1 | MTR_5g039490 | 27.336 | 289 | 165 | 11 | 2 | 285 | 6 | 254 | 1.01e-12 | 69.3 |
MS.gene54959.t1 | MTR_3g048290 | 26.984 | 252 | 139 | 7 | 17 | 259 | 22 | 237 | 1.04e-12 | 69.7 |
MS.gene54959.t1 | MTR_8g058965 | 31.004 | 229 | 119 | 9 | 16 | 230 | 11 | 214 | 1.39e-12 | 68.9 |
MS.gene54959.t1 | MTR_7g060470 | 26.513 | 347 | 178 | 13 | 18 | 340 | 3 | 296 | 1.77e-12 | 68.6 |
MS.gene54959.t1 | MTR_3g110010 | 30.233 | 215 | 110 | 6 | 18 | 230 | 13 | 189 | 5.69e-12 | 67.8 |
MS.gene54959.t1 | MTR_7g090750 | 32.258 | 217 | 121 | 6 | 17 | 233 | 10 | 200 | 7.39e-12 | 66.6 |
MS.gene54959.t1 | MTR_3g114200 | 30.526 | 190 | 89 | 6 | 1 | 180 | 1 | 157 | 7.73e-12 | 63.5 |
MS.gene54959.t1 | MTR_3g109982 | 29.493 | 217 | 113 | 6 | 18 | 232 | 13 | 191 | 8.06e-12 | 67.0 |
MS.gene54959.t1 | MTR_2g047858 | 28.326 | 233 | 137 | 8 | 5 | 235 | 101 | 305 | 8.54e-12 | 66.6 |
MS.gene54959.t1 | MTR_3g113782 | 45.349 | 86 | 38 | 3 | 1 | 78 | 1 | 85 | 1.09e-11 | 60.8 |
MS.gene54959.t1 | MTR_2g082880 | 30.894 | 123 | 71 | 2 | 18 | 138 | 10 | 120 | 1.61e-11 | 65.9 |
MS.gene54959.t1 | MTR_2g082860 | 49.206 | 63 | 31 | 1 | 1 | 62 | 9 | 71 | 1.68e-11 | 61.6 |
MS.gene54959.t1 | MTR_2g082850 | 32.432 | 148 | 72 | 6 | 1 | 138 | 9 | 138 | 1.97e-11 | 65.1 |
MS.gene54959.t1 | MTR_2g008300 | 51.389 | 72 | 29 | 1 | 170 | 241 | 4 | 69 | 2.19e-11 | 59.3 |
MS.gene54959.t1 | MTR_2g007100 | 47.368 | 76 | 35 | 2 | 17 | 87 | 1 | 76 | 2.91e-11 | 59.3 |
MS.gene54959.t1 | MTR_8g467800 | 29.661 | 236 | 134 | 9 | 2 | 235 | 3 | 208 | 3.29e-11 | 64.3 |
MS.gene54959.t1 | MTR_4g032730 | 27.948 | 229 | 130 | 8 | 17 | 237 | 14 | 215 | 3.49e-11 | 64.7 |
MS.gene54959.t1 | MTR_4g080773 | 24.561 | 399 | 186 | 15 | 18 | 343 | 19 | 375 | 3.64e-11 | 64.7 |
MS.gene54959.t1 | MTR_4g080773 | 24.561 | 399 | 186 | 15 | 18 | 343 | 19 | 375 | 3.81e-11 | 64.7 |
MS.gene54959.t1 | MTR_5g076150 | 31.325 | 166 | 84 | 7 | 193 | 339 | 46 | 200 | 4.97e-11 | 62.8 |
MS.gene54959.t1 | MTR_8g467800 | 29.661 | 236 | 134 | 9 | 2 | 235 | 3 | 208 | 5.77e-11 | 63.9 |
MS.gene54959.t1 | MTR_8g062270 | 24.464 | 233 | 145 | 7 | 16 | 243 | 14 | 220 | 7.83e-11 | 63.5 |
MS.gene54959.t1 | MTR_8g469020 | 28.889 | 225 | 135 | 8 | 14 | 230 | 3 | 210 | 9.08e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54959.t1 | AT1G16930 | 27.200 | 375 | 185 | 11 | 18 | 341 | 15 | 352 | 5.23e-24 | 103 |
MS.gene54959.t1 | AT1G16930 | 27.200 | 375 | 185 | 11 | 18 | 341 | 15 | 352 | 5.23e-24 | 103 |
MS.gene54959.t1 | AT1G16930 | 27.200 | 375 | 185 | 11 | 18 | 341 | 15 | 352 | 5.23e-24 | 103 |
MS.gene54959.t1 | AT1G78750 | 29.146 | 398 | 190 | 17 | 2 | 341 | 3 | 366 | 6.52e-24 | 102 |
MS.gene54959.t1 | AT1G78750 | 29.146 | 398 | 190 | 17 | 2 | 341 | 3 | 366 | 6.52e-24 | 102 |
MS.gene54959.t1 | AT4G13985 | 28.021 | 389 | 205 | 14 | 4 | 343 | 5 | 367 | 8.68e-23 | 99.8 |
MS.gene54959.t1 | AT3G60040 | 26.260 | 377 | 197 | 13 | 18 | 341 | 13 | 361 | 2.15e-18 | 87.0 |
MS.gene54959.t1 | AT3G60040 | 26.260 | 377 | 197 | 13 | 18 | 341 | 232 | 580 | 4.04e-18 | 86.7 |
MS.gene54959.t1 | AT3G60040 | 26.260 | 377 | 197 | 13 | 18 | 341 | 233 | 581 | 4.15e-18 | 86.7 |
MS.gene54959.t1 | AT3G52680 | 26.039 | 361 | 201 | 13 | 18 | 347 | 21 | 346 | 4.28e-18 | 85.1 |
MS.gene54959.t1 | AT3G60040 | 26.260 | 377 | 197 | 13 | 18 | 341 | 230 | 578 | 4.49e-18 | 86.3 |
MS.gene54959.t1 | AT3G60040 | 26.260 | 377 | 197 | 13 | 18 | 341 | 232 | 580 | 4.67e-18 | 86.3 |
MS.gene54959.t1 | AT4G00160 | 27.577 | 359 | 192 | 13 | 18 | 343 | 16 | 339 | 5.74e-18 | 85.5 |
MS.gene54959.t1 | AT3G58860 | 26.287 | 369 | 199 | 13 | 17 | 343 | 6 | 343 | 7.63e-18 | 85.1 |
MS.gene54959.t1 | AT3G52680 | 26.331 | 357 | 197 | 13 | 18 | 343 | 21 | 342 | 9.14e-18 | 84.7 |
MS.gene54959.t1 | AT3G26922 | 32.407 | 216 | 110 | 6 | 18 | 232 | 14 | 194 | 9.83e-18 | 83.2 |
MS.gene54959.t1 | AT3G26922 | 32.407 | 216 | 110 | 6 | 18 | 232 | 14 | 194 | 9.83e-18 | 83.2 |
MS.gene54959.t1 | AT1G69630 | 27.889 | 398 | 191 | 16 | 1 | 341 | 1 | 359 | 1.08e-17 | 84.7 |
MS.gene54959.t1 | AT4G14103 | 27.366 | 391 | 185 | 13 | 18 | 348 | 8 | 359 | 1.22e-17 | 84.3 |
MS.gene54959.t1 | AT4G14103 | 27.344 | 384 | 180 | 13 | 18 | 341 | 8 | 352 | 2.39e-17 | 83.2 |
MS.gene54959.t1 | AT4G14103 | 27.344 | 384 | 180 | 13 | 18 | 341 | 8 | 352 | 2.39e-17 | 83.2 |
MS.gene54959.t1 | AT3G58940 | 25.737 | 373 | 191 | 15 | 17 | 341 | 1 | 335 | 3.04e-17 | 83.6 |
MS.gene54959.t1 | AT3G58940 | 25.737 | 373 | 191 | 15 | 17 | 341 | 1 | 335 | 3.04e-17 | 83.6 |
MS.gene54959.t1 | AT2G26860 | 31.019 | 216 | 121 | 5 | 17 | 232 | 1 | 188 | 6.68e-17 | 82.0 |
MS.gene54959.t1 | AT2G26860 | 31.019 | 216 | 121 | 5 | 17 | 232 | 1 | 188 | 6.68e-17 | 82.0 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 7.28e-17 | 80.9 |
MS.gene54959.t1 | AT4G26340 | 27.374 | 358 | 193 | 12 | 17 | 343 | 1 | 322 | 1.27e-16 | 81.3 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 1.36e-16 | 80.5 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 1.36e-16 | 80.5 |
MS.gene54959.t1 | AT1G51370 | 24.619 | 394 | 200 | 14 | 2 | 350 | 4 | 345 | 1.57e-16 | 80.5 |
MS.gene54959.t1 | AT1G51370 | 25.131 | 382 | 190 | 13 | 18 | 354 | 19 | 349 | 1.78e-16 | 80.9 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 1.80e-16 | 80.5 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 1.80e-16 | 80.5 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 1.80e-16 | 80.5 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 1.80e-16 | 80.5 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 21 | 211 | 1.96e-16 | 80.5 |
MS.gene54959.t1 | AT3G59190 | 25.183 | 409 | 203 | 14 | 18 | 359 | 12 | 384 | 2.11e-16 | 80.5 |
MS.gene54959.t1 | AT1G51370 | 24.623 | 398 | 203 | 14 | 2 | 354 | 4 | 349 | 2.15e-16 | 80.5 |
MS.gene54959.t1 | AT1G06630 | 33.180 | 217 | 115 | 7 | 18 | 230 | 12 | 202 | 2.20e-16 | 80.9 |
MS.gene54959.t1 | AT3G59200 | 24.173 | 393 | 201 | 13 | 18 | 346 | 7 | 366 | 3.50e-16 | 80.1 |
MS.gene54959.t1 | AT3G59200 | 25.641 | 390 | 193 | 15 | 18 | 343 | 7 | 363 | 4.16e-16 | 79.3 |
MS.gene54959.t1 | AT3G42770 | 30.568 | 229 | 123 | 6 | 20 | 238 | 1 | 203 | 2.42e-15 | 77.8 |
MS.gene54959.t1 | AT5G22660 | 25.521 | 384 | 187 | 13 | 18 | 343 | 13 | 355 | 2.56e-15 | 77.4 |
MS.gene54959.t1 | AT3G58880 | 26.166 | 386 | 202 | 12 | 17 | 349 | 2 | 357 | 2.87e-15 | 77.4 |
MS.gene54959.t1 | AT3G59190 | 25.320 | 391 | 190 | 13 | 18 | 341 | 12 | 367 | 3.73e-15 | 77.0 |
MS.gene54959.t1 | AT3G44060 | 30.876 | 217 | 122 | 4 | 20 | 236 | 1 | 189 | 4.30e-15 | 76.6 |
MS.gene54959.t1 | AT5G22720 | 27.586 | 232 | 132 | 6 | 18 | 248 | 23 | 219 | 6.42e-15 | 76.3 |
MS.gene54959.t1 | AT1G66290 | 25.000 | 404 | 199 | 14 | 2 | 343 | 5 | 366 | 1.49e-14 | 75.1 |
MS.gene54959.t1 | AT4G14096 | 26.344 | 372 | 192 | 13 | 18 | 341 | 8 | 345 | 1.60e-14 | 75.1 |
MS.gene54959.t1 | AT4G14096 | 26.344 | 372 | 192 | 13 | 18 | 341 | 8 | 345 | 1.60e-14 | 75.1 |
MS.gene54959.t1 | AT5G22660 | 29.412 | 221 | 110 | 6 | 18 | 233 | 13 | 192 | 2.21e-14 | 73.6 |
MS.gene54959.t1 | AT1G13780 | 28.958 | 259 | 136 | 12 | 10 | 256 | 2 | 224 | 2.56e-14 | 73.6 |
MS.gene54959.t1 | AT1G78760 | 28.782 | 271 | 131 | 11 | 4 | 266 | 8 | 224 | 2.66e-14 | 74.3 |
MS.gene54959.t1 | AT1G13780 | 28.958 | 259 | 136 | 12 | 10 | 256 | 2 | 224 | 2.79e-14 | 74.3 |
MS.gene54959.t1 | AT5G41630 | 30.213 | 235 | 136 | 8 | 18 | 247 | 12 | 223 | 3.40e-14 | 73.9 |
MS.gene54959.t1 | AT3G58900 | 25.000 | 388 | 196 | 14 | 17 | 341 | 1 | 356 | 4.07e-14 | 73.9 |
MS.gene54959.t1 | AT3G59210 | 29.596 | 223 | 125 | 6 | 18 | 237 | 7 | 200 | 4.18e-14 | 73.9 |
MS.gene54959.t1 | AT3G59210 | 29.596 | 223 | 125 | 6 | 18 | 237 | 7 | 200 | 4.18e-14 | 73.9 |
MS.gene54959.t1 | AT3G59210 | 29.596 | 223 | 125 | 6 | 18 | 237 | 7 | 200 | 4.18e-14 | 73.9 |
MS.gene54959.t1 | AT3G59210 | 29.596 | 223 | 125 | 6 | 18 | 237 | 7 | 200 | 4.18e-14 | 73.9 |
MS.gene54959.t1 | AT3G59210 | 29.596 | 223 | 125 | 6 | 18 | 237 | 7 | 200 | 4.18e-14 | 73.9 |
MS.gene54959.t1 | AT4G13965 | 30.455 | 220 | 107 | 6 | 18 | 232 | 10 | 188 | 8.18e-14 | 72.8 |
MS.gene54959.t1 | AT5G53840 | 26.688 | 311 | 178 | 10 | 18 | 319 | 18 | 287 | 9.56e-14 | 72.8 |
MS.gene54959.t1 | AT1G66320 | 24.074 | 378 | 185 | 15 | 23 | 341 | 35 | 369 | 2.73e-13 | 71.2 |
MS.gene54959.t1 | AT1G66300 | 23.457 | 405 | 204 | 17 | 2 | 341 | 5 | 368 | 3.26e-13 | 70.9 |
MS.gene54959.t1 | AT5G60610 | 29.358 | 218 | 113 | 6 | 17 | 232 | 1 | 179 | 4.24e-13 | 70.5 |
MS.gene54959.t1 | AT5G60610 | 29.358 | 218 | 113 | 6 | 17 | 232 | 1 | 179 | 4.24e-13 | 70.5 |
MS.gene54959.t1 | AT5G25850 | 28.270 | 237 | 123 | 9 | 1 | 232 | 2 | 196 | 6.26e-13 | 70.1 |
MS.gene54959.t1 | AT3G59160 | 28.992 | 238 | 115 | 7 | 18 | 230 | 13 | 221 | 6.38e-13 | 70.1 |
MS.gene54959.t1 | AT5G56440 | 29.224 | 219 | 113 | 5 | 17 | 230 | 1 | 182 | 6.58e-13 | 70.1 |
MS.gene54959.t1 | AT4G26350 | 27.731 | 238 | 132 | 7 | 17 | 252 | 1 | 200 | 8.43e-13 | 69.7 |
MS.gene54959.t1 | AT5G44950 | 28.767 | 219 | 117 | 7 | 18 | 233 | 4 | 186 | 9.41e-13 | 69.7 |
MS.gene54959.t1 | AT5G56410 | 29.911 | 224 | 128 | 5 | 17 | 232 | 1 | 203 | 9.87e-13 | 69.7 |
MS.gene54959.t1 | AT3G44810 | 31.797 | 217 | 117 | 9 | 20 | 232 | 9 | 198 | 1.18e-12 | 69.3 |
MS.gene54959.t1 | AT3G58900 | 29.091 | 275 | 146 | 10 | 17 | 287 | 1 | 230 | 1.72e-12 | 68.2 |
MS.gene54959.t1 | AT5G22700 | 27.246 | 345 | 189 | 13 | 18 | 343 | 43 | 344 | 1.80e-12 | 68.6 |
MS.gene54959.t1 | AT4G10400 | 29.386 | 228 | 118 | 8 | 17 | 239 | 1 | 190 | 2.30e-12 | 68.2 |
MS.gene54959.t1 | AT4G10400 | 29.386 | 228 | 118 | 8 | 17 | 239 | 1 | 190 | 2.30e-12 | 68.2 |
MS.gene54959.t1 | AT4G10400 | 29.386 | 228 | 118 | 8 | 17 | 239 | 1 | 190 | 2.30e-12 | 68.2 |
MS.gene54959.t1 | AT3G58900 | 29.091 | 275 | 146 | 10 | 17 | 287 | 1 | 230 | 2.40e-12 | 67.8 |
MS.gene54959.t1 | AT3G58900 | 29.091 | 275 | 146 | 10 | 17 | 287 | 1 | 230 | 2.40e-12 | 67.8 |
MS.gene54959.t1 | AT3G51530 | 28.692 | 237 | 127 | 9 | 9 | 243 | 21 | 217 | 2.65e-12 | 68.2 |
MS.gene54959.t1 | AT2G04230 | 30.594 | 219 | 117 | 8 | 18 | 232 | 13 | 200 | 3.04e-12 | 68.2 |
MS.gene54959.t1 | AT5G41840 | 27.119 | 236 | 136 | 7 | 18 | 243 | 14 | 223 | 3.07e-12 | 68.2 |
MS.gene54959.t1 | AT3G58930 | 23.678 | 397 | 200 | 17 | 17 | 341 | 1 | 366 | 3.23e-12 | 68.2 |
MS.gene54959.t1 | AT3G58930 | 23.678 | 397 | 200 | 17 | 17 | 341 | 1 | 366 | 3.23e-12 | 68.2 |
MS.gene54959.t1 | AT3G58930 | 23.678 | 397 | 200 | 17 | 17 | 341 | 1 | 366 | 3.23e-12 | 68.2 |
MS.gene54959.t1 | AT5G56370 | 24.576 | 354 | 211 | 10 | 17 | 348 | 1 | 320 | 3.29e-12 | 67.4 |
MS.gene54959.t1 | AT1G66310 | 22.588 | 425 | 216 | 11 | 5 | 371 | 6 | 375 | 3.93e-12 | 67.8 |
MS.gene54959.t1 | AT1G48400 | 31.481 | 216 | 115 | 7 | 18 | 230 | 10 | 195 | 4.31e-12 | 67.8 |
MS.gene54959.t1 | AT5G22610 | 24.576 | 354 | 209 | 10 | 18 | 343 | 18 | 341 | 4.59e-12 | 67.4 |
MS.gene54959.t1 | AT5G22700 | 29.091 | 220 | 116 | 6 | 18 | 235 | 6 | 187 | 5.13e-12 | 67.4 |
MS.gene54959.t1 | AT5G22700 | 29.091 | 220 | 116 | 6 | 18 | 235 | 6 | 187 | 5.13e-12 | 67.4 |
MS.gene54959.t1 | AT5G22700 | 29.091 | 220 | 116 | 6 | 18 | 235 | 6 | 187 | 5.13e-12 | 67.4 |
MS.gene54959.t1 | AT5G22700 | 29.091 | 220 | 116 | 6 | 18 | 235 | 6 | 187 | 5.13e-12 | 67.4 |
MS.gene54959.t1 | AT4G27050 | 29.730 | 222 | 125 | 7 | 17 | 230 | 3 | 201 | 5.14e-12 | 67.4 |
MS.gene54959.t1 | AT4G27050 | 29.730 | 222 | 125 | 7 | 17 | 230 | 3 | 201 | 5.14e-12 | 67.4 |
MS.gene54959.t1 | AT4G27050 | 29.730 | 222 | 125 | 7 | 17 | 230 | 3 | 201 | 5.14e-12 | 67.4 |
MS.gene54959.t1 | AT4G27050 | 29.730 | 222 | 125 | 7 | 17 | 230 | 3 | 201 | 5.14e-12 | 67.4 |
MS.gene54959.t1 | AT4G27050 | 29.730 | 222 | 125 | 7 | 17 | 230 | 3 | 201 | 5.14e-12 | 67.4 |
MS.gene54959.t1 | AT3G26922 | 30.151 | 199 | 103 | 6 | 35 | 232 | 2 | 165 | 5.16e-12 | 66.2 |
MS.gene54959.t1 | AT3G26922 | 30.151 | 199 | 103 | 6 | 35 | 232 | 2 | 165 | 5.16e-12 | 66.2 |
MS.gene54959.t1 | AT5G22700 | 29.091 | 220 | 116 | 6 | 18 | 235 | 43 | 224 | 5.23e-12 | 67.4 |
MS.gene54959.t1 | AT1G48400 | 31.481 | 216 | 115 | 7 | 18 | 230 | 10 | 195 | 6.07e-12 | 67.4 |
MS.gene54959.t1 | AT5G22670 | 31.336 | 217 | 109 | 7 | 18 | 232 | 11 | 189 | 6.46e-12 | 67.0 |
MS.gene54959.t1 | AT3G59170 | 25.908 | 413 | 184 | 15 | 18 | 341 | 7 | 386 | 8.95e-12 | 66.6 |
MS.gene54959.t1 | AT1G78840 | 25.066 | 379 | 178 | 15 | 23 | 344 | 11 | 340 | 1.03e-11 | 66.2 |
MS.gene54959.t1 | AT1G78840 | 25.066 | 379 | 178 | 15 | 23 | 344 | 11 | 340 | 1.03e-11 | 66.2 |
MS.gene54959.t1 | AT3G59000 | 28.390 | 236 | 138 | 7 | 17 | 238 | 1 | 219 | 1.19e-11 | 65.9 |
MS.gene54959.t1 | AT5G53640 | 26.587 | 252 | 125 | 9 | 4 | 242 | 3 | 207 | 1.33e-11 | 64.3 |
MS.gene54959.t1 | AT5G56370 | 29.717 | 212 | 115 | 5 | 17 | 228 | 1 | 178 | 1.79e-11 | 65.5 |
MS.gene54959.t1 | AT5G56370 | 29.717 | 212 | 115 | 5 | 17 | 228 | 1 | 178 | 1.79e-11 | 65.5 |
MS.gene54959.t1 | AT3G49040 | 30.455 | 220 | 112 | 8 | 18 | 232 | 17 | 200 | 1.94e-11 | 64.7 |
MS.gene54959.t1 | AT5G18780 | 26.033 | 242 | 139 | 6 | 18 | 257 | 11 | 214 | 2.04e-11 | 65.1 |
MS.gene54959.t1 | AT5G18780 | 26.033 | 242 | 139 | 6 | 18 | 257 | 11 | 214 | 2.04e-11 | 65.1 |
MS.gene54959.t1 | AT4G09920 | 28.378 | 222 | 117 | 7 | 17 | 233 | 1 | 185 | 2.31e-11 | 64.7 |
MS.gene54959.t1 | AT4G09920 | 28.378 | 222 | 117 | 7 | 17 | 233 | 1 | 185 | 2.31e-11 | 64.7 |
MS.gene54959.t1 | AT5G18780 | 26.033 | 242 | 139 | 6 | 18 | 257 | 11 | 214 | 3.43e-11 | 64.7 |
MS.gene54959.t1 | AT5G18780 | 26.033 | 242 | 139 | 6 | 18 | 257 | 11 | 214 | 3.43e-11 | 64.7 |
MS.gene54959.t1 | AT4G09920 | 27.049 | 244 | 136 | 7 | 17 | 255 | 1 | 207 | 3.46e-11 | 63.9 |
MS.gene54959.t1 | AT4G09920 | 27.049 | 244 | 136 | 7 | 17 | 255 | 1 | 207 | 3.46e-11 | 63.9 |
MS.gene54959.t1 | AT4G09920 | 27.049 | 244 | 136 | 7 | 17 | 255 | 1 | 207 | 3.46e-11 | 63.9 |
MS.gene54959.t1 | AT1G80470 | 28.448 | 232 | 115 | 9 | 18 | 240 | 15 | 204 | 4.08e-11 | 64.7 |
MS.gene54959.t1 | AT3G58960 | 24.485 | 388 | 191 | 16 | 17 | 341 | 1 | 349 | 7.81e-11 | 63.9 |
Find 81 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATATGTGCACTAATCAATT+TGG | 0.235682 | 7.2:+23616273 | None:intergenic |
GAGAATACCAACAGGCAATT+TGG | 0.253860 | 7.2:+23616567 | None:intergenic |
ATTAGATTTGGATTTGGATT+TGG | 0.281235 | 7.2:-23616478 | MS.gene54959:CDS |
TTTGGATTTGGATTTGGATT+TGG | 0.293606 | 7.2:-23616472 | MS.gene54959:CDS |
TGAGTCTATATACTCAATTT+TGG | 0.296206 | 7.2:-23616806 | MS.gene54959:CDS |
GATTCTTCTTCTATTAGATT+TGG | 0.302275 | 7.2:-23616490 | MS.gene54959:CDS |
GCTTGTGGCAACTGCCTCTT+TGG | 0.307775 | 7.2:+23616930 | None:intergenic |
TTTAGTCTCGAAATTGAATA+TGG | 0.325057 | 7.2:-23616745 | MS.gene54959:CDS |
TCTTCTATTAGATTTGGATT+TGG | 0.328909 | 7.2:-23616484 | MS.gene54959:CDS |
ATCACTCAATGTCCTTCATT+TGG | 0.329833 | 7.2:-23616443 | MS.gene54959:CDS |
TATGATCTAGCCTTACGTTT+TGG | 0.357736 | 7.2:-23616718 | MS.gene54959:CDS |
ACTCGTAGATGCTCAAGATT+TGG | 0.374943 | 7.2:+23616367 | None:intergenic |
GGATAAGATCAGCAGTTTAC+CGG | 0.376662 | 7.2:-23616989 | MS.gene54959:CDS |
GATTGGAGCTTTACGATGAT+TGG | 0.378888 | 7.2:-23615800 | MS.gene54959:CDS |
CGGGACAAATTATGAAAGAT+AGG | 0.382552 | 7.2:+23615822 | None:intergenic |
AAAAGATCACAAATTCTTCC+AGG | 0.388189 | 7.2:-23616164 | MS.gene54959:intron |
AGAATACCAACAGGCAATTT+GGG | 0.388460 | 7.2:+23616568 | None:intergenic |
AGTTCGAGATGTTGAAGCTT+AGG | 0.389430 | 7.2:+23615747 | None:intergenic |
TTGGTCTCTCGCGACGCCGC+TGG | 0.397259 | 7.2:-23616787 | MS.gene54959:CDS |
CAAAGAGATGGACTCATCTC+TGG | 0.411250 | 7.2:-23616900 | MS.gene54959:CDS |
CTTTCATAATTTGTCCCGAT+TGG | 0.417482 | 7.2:-23615817 | MS.gene54959:CDS |
ATATGTGCACTAATCAATTT+GGG | 0.422506 | 7.2:+23616274 | None:intergenic |
GCATTCACAACGTCAACAAA+TGG | 0.428875 | 7.2:-23616696 | MS.gene54959:CDS |
GTGGCAACTGCCTCTTTGGT+AGG | 0.428995 | 7.2:+23616934 | None:intergenic |
ATTGGAGCTTTACGATGATT+GGG | 0.449702 | 7.2:-23615799 | MS.gene54959:CDS |
GTTCGAGATGTTGAAGCTTA+GGG | 0.452873 | 7.2:+23615748 | None:intergenic |
ATCAAGGTTCATCCATTGTA+CGG | 0.465478 | 7.2:-23615150 | MS.gene54959:CDS |
TCAACATCTCGAACTTTACA+AGG | 0.468919 | 7.2:-23615739 | MS.gene54959:intron |
CTTGAGCATCTACGAGTTGT+GGG | 0.478913 | 7.2:-23616361 | MS.gene54959:CDS |
ATCTTATCCACCGCTGGTGG+TGG | 0.483228 | 7.2:+23617003 | None:intergenic |
TGGCAACTGCCTCTTTGGTA+GGG | 0.485980 | 7.2:+23616935 | None:intergenic |
AGACTTGATTGCACAGCCAC+AGG | 0.489740 | 7.2:-23615108 | MS.gene54959:CDS |
GTTGAAGCTTAGGGCAGTGT+TGG | 0.492971 | 7.2:+23615757 | None:intergenic |
AATCATCGTAAAGCTCCAAT+CGG | 0.505933 | 7.2:+23615802 | None:intergenic |
TTATCCACCGCTGGTGGTGG+TGG | 0.512107 | 7.2:+23617006 | None:intergenic |
TACCGGACGCGATTCTGAGC+GGG | 0.516154 | 7.2:-23616972 | MS.gene54959:CDS |
TCTTGAGCATCTACGAGTTG+TGG | 0.523909 | 7.2:-23616362 | MS.gene54959:CDS |
CAGGGCAGAGGCGTGTATGA+AGG | 0.527197 | 7.2:-23615089 | None:intergenic |
GCGGATCTACTTCCTCATCA+TGG | 0.529242 | 7.2:+23616329 | None:intergenic |
ACCGACGGTATCAACTTCTC+CGG | 0.535091 | 7.2:-23616871 | MS.gene54959:CDS |
ATCATCGTAAAGCTCCAATC+GGG | 0.537395 | 7.2:+23615803 | None:intergenic |
AGATCACATTGTCCAAATGA+AGG | 0.538608 | 7.2:+23616431 | None:intergenic |
CAAGGAACCAACCGAGGTCG+AGG | 0.544035 | 7.2:+23616524 | None:intergenic |
ATCCCGCTCAGAATCGCGTC+CGG | 0.546632 | 7.2:+23616970 | None:intergenic |
CTGCTGATCTTATCCACCGC+TGG | 0.548082 | 7.2:+23616997 | None:intergenic |
GTTGTGAATGCCAAAACGTA+AGG | 0.555391 | 7.2:+23616708 | None:intergenic |
ATTGCACAGCCACAGGGCAG+AGG | 0.558750 | 7.2:-23615101 | MS.gene54959:CDS |
GGCATACCCAAATTGCCTGT+TGG | 0.566943 | 7.2:-23616574 | MS.gene54959:CDS |
TCAAGGTTCATCCATTGTAC+GGG | 0.571360 | 7.2:-23615149 | MS.gene54959:CDS |
AAGAAGAAATGGGGCGACGG+AGG | 0.571428 | 7.2:-23617047 | None:intergenic |
GGGCAGTGTTGGAGCACTTG+CGG | 0.573680 | 7.2:+23615768 | None:intergenic |
CAAGCATTCTGTCAAAGAGA+TGG | 0.573974 | 7.2:-23616912 | MS.gene54959:CDS |
TTAAACTCTTGAATGAATAG+CGG | 0.574225 | 7.2:+23616310 | None:intergenic |
AACAAGAAGAAATGGGGCGA+CGG | 0.574256 | 7.2:-23617050 | None:intergenic |
TCTCTTTGACAGAATGCTTG+TGG | 0.575936 | 7.2:+23616915 | None:intergenic |
GTACATGTGAGAATACCAAC+AGG | 0.579568 | 7.2:+23616559 | None:intergenic |
AAATTAGATAGTGCTTTCAA+CGG | 0.589096 | 7.2:+23616223 | None:intergenic |
GCTTTACGATGATTGGGAGG+TGG | 0.590171 | 7.2:-23615793 | MS.gene54959:CDS |
GTCTCGTCTCCCTACCAAAG+AGG | 0.593043 | 7.2:-23616944 | MS.gene54959:CDS |
TTGTAAGCCTCGACCTCGGT+TGG | 0.593890 | 7.2:-23616531 | MS.gene54959:CDS |
AAATGAAGGACATTGAGTGA+TGG | 0.599122 | 7.2:+23616445 | None:intergenic |
AGCACCACCACCACCAGCGG+TGG | 0.617768 | 7.2:-23617010 | MS.gene54959:CDS |
GACTTGATTGCACAGCCACA+GGG | 0.622709 | 7.2:-23615107 | MS.gene54959:CDS |
GTTATTCACTGTGATGATGC+CGG | 0.628120 | 7.2:+23616852 | None:intergenic |
CTAATAGAAGAAGAATCGAA+AGG | 0.629105 | 7.2:+23616496 | None:intergenic |
AGATAGGAATATCATCGTAA+CGG | 0.630870 | 7.2:+23615838 | None:intergenic |
AAGAATCGAAAGGCTTCACA+AGG | 0.633081 | 7.2:+23616506 | None:intergenic |
AGAAGCACCACCACCACCAG+CGG | 0.633130 | 7.2:-23617013 | MS.gene54959:CDS |
GCATACATGTGCCCGTACAA+TGG | 0.635239 | 7.2:+23615138 | None:intergenic |
CAAGGCTATTCACACTGACG+TGG | 0.636781 | 7.2:+23616632 | None:intergenic |
GCCGGAGAAGTTGATACCGT+CGG | 0.639653 | 7.2:+23616870 | None:intergenic |
CTGATCTTATCCACCGCTGG+TGG | 0.645294 | 7.2:+23617000 | None:intergenic |
TATCTAATTTGAAGTCTCTG+AGG | 0.648071 | 7.2:-23616210 | MS.gene54959:CDS |
GGAGCTTTACGATGATTGGG+AGG | 0.649670 | 7.2:-23615796 | MS.gene54959:CDS |
CATCTCTGGAAATTTACCGA+CGG | 0.653189 | 7.2:-23616886 | MS.gene54959:CDS |
ATCGATGAAATGAGAGCCAG+CGG | 0.657046 | 7.2:+23616771 | None:intergenic |
GGGTATATACTTCCATGATG+AGG | 0.659733 | 7.2:-23616341 | MS.gene54959:CDS |
GCTTCACAAGGAACCAACCG+AGG | 0.686050 | 7.2:+23616518 | None:intergenic |
TCATACACGCCTCTGCCCTG+TGG | 0.686102 | 7.2:+23615092 | None:intergenic |
ACACTTGTAAGCCTCGACCT+CGG | 0.696576 | 7.2:-23616535 | MS.gene54959:CDS |
TTACCGGACGCGATTCTGAG+CGG | 0.700251 | 7.2:-23616973 | MS.gene54959:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTATATAAATAAAAAGTT+AGG | + | chr7.2:23616924-23616943 | None:intergenic | 10.0% |
!! | TGTATATAAATAAAAAGTTA+GGG | + | chr7.2:23616923-23616942 | None:intergenic | 10.0% |
!! | AAAAGAAAAAAGAAAAAACA+TGG | + | chr7.2:23616209-23616228 | None:intergenic | 15.0% |
!! | GTTATCAATAAAATAAAAGT+CGG | + | chr7.2:23616735-23616754 | None:intergenic | 15.0% |
!! | AAAAAGATGATGAAGAAAAT+TGG | - | chr7.2:23616500-23616519 | MS.gene54959:CDS | 20.0% |
!! | AAAAGATGATGAAGAAAATT+GGG | - | chr7.2:23616501-23616520 | MS.gene54959:CDS | 20.0% |
!! | ATAAATAAATAAAACGAACC+TGG | + | chr7.2:23615988-23616007 | None:intergenic | 20.0% |
!! | TAGTTATGTGCAATATTAAT+AGG | - | chr7.2:23616477-23616496 | MS.gene54959:CDS | 20.0% |
!! | TATAATCAAATTGGAGAAAA+CGG | + | chr7.2:23616112-23616131 | None:intergenic | 20.0% |
!! | TGTAATCAATTGTGTTATAT+TGG | + | chr7.2:23616061-23616080 | None:intergenic | 20.0% |
!!! | AGCAAAATATATTTTGATGA+AGG | - | chr7.2:23616615-23616634 | MS.gene54959:CDS | 20.0% |
!!! | GACAATTTTCTTTTGATTTT+AGG | + | chr7.2:23616685-23616704 | None:intergenic | 20.0% |
! | AAATTAGATAGTGCTTTCAA+CGG | + | chr7.2:23615911-23615930 | None:intergenic | 25.0% |
! | AAGAAAAGATAAACCGAATA+TGG | + | chr7.2:23616442-23616461 | None:intergenic | 25.0% |
! | AGACAGTATTATATAGATTG+AGG | + | chr7.2:23616034-23616053 | None:intergenic | 25.0% |
! | ATATGTGCACTAATCAATTT+GGG | + | chr7.2:23615860-23615879 | None:intergenic | 25.0% |
! | ATCTAATTGAAGTCATAAAC+AGG | + | chr7.2:23616963-23616982 | None:intergenic | 25.0% |
! | ATTAGATTTGGATTTGGATT+TGG | - | chr7.2:23615653-23615672 | MS.gene54959:intron | 25.0% |
! | ATTGCACATAACTAAAGTTA+AGG | + | chr7.2:23616471-23616490 | None:intergenic | 25.0% |
! | GATTCTTCTTCTATTAGATT+TGG | - | chr7.2:23615641-23615660 | MS.gene54959:intron | 25.0% |
! | TAAGAAGTAAGAACCATATT+CGG | - | chr7.2:23616426-23616445 | MS.gene54959:CDS | 25.0% |
! | TCTTCTATTAGATTTGGATT+TGG | - | chr7.2:23615647-23615666 | MS.gene54959:intron | 25.0% |
! | TTAAACTCTTGAATGAATAG+CGG | + | chr7.2:23615824-23615843 | None:intergenic | 25.0% |
! | TTATGACTTCAATTAGATCA+AGG | - | chr7.2:23616965-23616984 | MS.gene54959:CDS | 25.0% |
! | TTTAGTCTCGAAATTGAATA+TGG | - | chr7.2:23615386-23615405 | MS.gene54959:intron | 25.0% |
!! | TGAGTCTATATACTCAATTT+TGG | - | chr7.2:23615325-23615344 | MS.gene54959:intron | 25.0% |
!! | TTTTACAAATCATGGAAATC+TGG | - | chr7.2:23616644-23616663 | MS.gene54959:CDS | 25.0% |
!!! | CTGTTTTATTAGCTTCTATT+TGG | - | chr7.2:23616794-23616813 | MS.gene54959:CDS | 25.0% |
AAAAGATCACAAATTCTTCC+AGG | - | chr7.2:23615967-23615986 | MS.gene54959:intron | 30.0% | |
AAAGACACACTATCAAATTG+GGG | + | chr7.2:23616243-23616262 | None:intergenic | 30.0% | |
AGATAGGAATATCATCGTAA+CGG | + | chr7.2:23616296-23616315 | None:intergenic | 30.0% | |
CTAATAGAAGAAGAATCGAA+AGG | + | chr7.2:23615638-23615657 | None:intergenic | 30.0% | |
GAAAGACACACTATCAAATT+GGG | + | chr7.2:23616244-23616263 | None:intergenic | 30.0% | |
GATATGTGCACTAATCAATT+TGG | + | chr7.2:23615861-23615880 | None:intergenic | 30.0% | |
GGACTGACATATAATCAAAT+TGG | + | chr7.2:23616121-23616140 | None:intergenic | 30.0% | |
TTTGGATTTGGATTTGGATT+TGG | - | chr7.2:23615659-23615678 | MS.gene54959:intron | 30.0% | |
! | GATGATGATGATGATGAATA+TGG | - | chr7.2:23615536-23615555 | MS.gene54959:intron | 30.0% |
! | GGCAAGAATTTTACAAATCA+TGG | - | chr7.2:23616636-23616655 | MS.gene54959:CDS | 30.0% |
! | TATCTAATTTGAAGTCTCTG+AGG | - | chr7.2:23615921-23615940 | MS.gene54959:intron | 30.0% |
!!! | GATTTTTTGTTGCTTTTAGC+TGG | - | chr7.2:23615737-23615756 | MS.gene54959:intron | 30.0% |
AAATGAAGGACATTGAGTGA+TGG | + | chr7.2:23615689-23615708 | None:intergenic | 35.0% | |
AAGCTAATAAAACAGCAAGC+AGG | + | chr7.2:23616789-23616808 | None:intergenic | 35.0% | |
AATCATCGTAAAGCTCCAAT+CGG | + | chr7.2:23616332-23616351 | None:intergenic | 35.0% | |
AGAATACCAACAGGCAATTT+GGG | + | chr7.2:23615566-23615585 | None:intergenic | 35.0% | |
AGATCACATTGTCCAAATGA+AGG | + | chr7.2:23615703-23615722 | None:intergenic | 35.0% | |
AGATGATGAAGAAAATTGGG+TGG | - | chr7.2:23616504-23616523 | MS.gene54959:CDS | 35.0% | |
ATCAAGGTTCATCCATTGTA+CGG | - | chr7.2:23616981-23617000 | MS.gene54959:CDS | 35.0% | |
ATCACTCAATGTCCTTCATT+TGG | - | chr7.2:23615688-23615707 | MS.gene54959:intron | 35.0% | |
ATTGGAGCTTTACGATGATT+GGG | - | chr7.2:23616332-23616351 | MS.gene54959:CDS | 35.0% | |
CATCATCATCATCATCATCA+AGG | + | chr7.2:23615520-23615539 | None:intergenic | 35.0% | |
CATGAATAGTGCAAGTTCTA+AGG | + | chr7.2:23616564-23616583 | None:intergenic | 35.0% | |
CGAAAGACACACTATCAAAT+TGG | + | chr7.2:23616245-23616264 | None:intergenic | 35.0% | |
CGGGACAAATTATGAAAGAT+AGG | + | chr7.2:23616312-23616331 | None:intergenic | 35.0% | |
TCAACATCTCGAACTTTACA+AGG | - | chr7.2:23616392-23616411 | MS.gene54959:CDS | 35.0% | |
TGTGTCTTTCGACATAATTC+AGG | - | chr7.2:23616254-23616273 | MS.gene54959:CDS | 35.0% | |
! | CATGGAAATCTGGAACAAAT+GGG | - | chr7.2:23616654-23616673 | MS.gene54959:CDS | 35.0% |
! | CTTTCATAATTTGTCCCGAT+TGG | - | chr7.2:23616314-23616333 | MS.gene54959:CDS | 35.0% |
! | TCATGGAAATCTGGAACAAA+TGG | - | chr7.2:23616653-23616672 | MS.gene54959:CDS | 35.0% |
! | TGCACTATTCATGACTTTTC+AGG | - | chr7.2:23616571-23616590 | MS.gene54959:CDS | 35.0% |
!! | AAGTTCTAAGGTATGATGAC+AGG | + | chr7.2:23616552-23616571 | None:intergenic | 35.0% |
!!! | TATGATCTAGCCTTACGTTT+TGG | - | chr7.2:23615413-23615432 | MS.gene54959:intron | 35.0% |
AAAATTGTCCACTTGCCCAA+AGG | - | chr7.2:23616696-23616715 | MS.gene54959:CDS | 40.0% | |
AAGAATCGAAAGGCTTCACA+AGG | + | chr7.2:23615628-23615647 | None:intergenic | 40.0% | |
ACTCGTAGATGCTCAAGATT+TGG | + | chr7.2:23615767-23615786 | None:intergenic | 40.0% | |
AGTTCGAGATGTTGAAGCTT+AGG | + | chr7.2:23616387-23616406 | None:intergenic | 40.0% | |
ATCATCGTAAAGCTCCAATC+GGG | + | chr7.2:23616331-23616350 | None:intergenic | 40.0% | |
CAAGCATTCTGTCAAAGAGA+TGG | - | chr7.2:23615219-23615238 | MS.gene54959:intron | 40.0% | |
GAGAATACCAACAGGCAATT+TGG | + | chr7.2:23615567-23615586 | None:intergenic | 40.0% | |
GATTGGAGCTTTACGATGAT+TGG | - | chr7.2:23616331-23616350 | MS.gene54959:CDS | 40.0% | |
GCATTCACAACGTCAACAAA+TGG | - | chr7.2:23615435-23615454 | MS.gene54959:intron | 40.0% | |
GGATAAGATCAGCAGTTTAC+CGG | - | chr7.2:23615142-23615161 | MS.gene54959:CDS | 40.0% | |
GGGTATATACTTCCATGATG+AGG | - | chr7.2:23615790-23615809 | MS.gene54959:CDS | 40.0% | |
GTACATGTGAGAATACCAAC+AGG | + | chr7.2:23615575-23615594 | None:intergenic | 40.0% | |
GTTCGAGATGTTGAAGCTTA+GGG | + | chr7.2:23616386-23616405 | None:intergenic | 40.0% | |
GTTGTGAATGCCAAAACGTA+AGG | + | chr7.2:23615426-23615445 | None:intergenic | 40.0% | |
TCAAGGTTCATCCATTGTAC+GGG | - | chr7.2:23616982-23617001 | MS.gene54959:CDS | 40.0% | |
TCTCTTTGACAGAATGCTTG+TGG | + | chr7.2:23615219-23615238 | None:intergenic | 40.0% | |
! | CATCTCTGGAAATTTACCGA+CGG | - | chr7.2:23615245-23615264 | MS.gene54959:intron | 40.0% |
! | GTTATTCACTGTGATGATGC+CGG | + | chr7.2:23615282-23615301 | None:intergenic | 40.0% |
ATCGATGAAATGAGAGCCAG+CGG | + | chr7.2:23615363-23615382 | None:intergenic | 45.0% | |
CTAACATAAGCTCGCTGTGT+AGG | + | chr7.2:23616597-23616616 | None:intergenic | 45.0% | |
CTTGAGCATCTACGAGTTGT+GGG | - | chr7.2:23615770-23615789 | MS.gene54959:CDS | 45.0% | |
GCGTATGGTGGTCAATACAA+TGG | + | chr7.2:23616142-23616161 | None:intergenic | 45.0% | |
TAAAAGTCGGCATGTTGCAG+AGG | + | chr7.2:23616722-23616741 | None:intergenic | 45.0% | |
TATTGACCACCATACGCTGA+AGG | - | chr7.2:23616145-23616164 | MS.gene54959:intron | 45.0% | |
TCTTGAGCATCTACGAGTTG+TGG | - | chr7.2:23615769-23615788 | MS.gene54959:CDS | 45.0% | |
TTGTCTCGCTGCACTAATGA+AGG | - | chr7.2:23616860-23616879 | MS.gene54959:CDS | 45.0% | |
! | AGGTATGATGACAGGCATTG+AGG | + | chr7.2:23616544-23616563 | None:intergenic | 45.0% |
! | CAAAGAGATGGACTCATCTC+TGG | - | chr7.2:23615231-23615250 | MS.gene54959:intron | 45.0% |
ACACTTGTAAGCCTCGACCT+CGG | - | chr7.2:23615596-23615615 | MS.gene54959:intron | 50.0% | |
ACCACCATACGCTGAAGGAA+TGG | - | chr7.2:23616150-23616169 | MS.gene54959:intron | 50.0% | |
ACCGACGGTATCAACTTCTC+CGG | - | chr7.2:23615260-23615279 | MS.gene54959:intron | 50.0% | |
AGACTTGATTGCACAGCCAC+AGG | - | chr7.2:23617023-23617042 | MS.gene54959:CDS | 50.0% | |
CAAGGCTATTCACACTGACG+TGG | + | chr7.2:23615502-23615521 | None:intergenic | 50.0% | |
CATACGCTGAAGGAATGGGA+TGG | - | chr7.2:23616155-23616174 | MS.gene54959:intron | 50.0% | |
CATCCCATTCCTTCAGCGTA+TGG | + | chr7.2:23616157-23616176 | None:intergenic | 50.0% | |
CCACCATACGCTGAAGGAAT+GGG | - | chr7.2:23616151-23616170 | MS.gene54959:intron | 50.0% | |
GACTTGATTGCACAGCCACA+GGG | - | chr7.2:23617024-23617043 | MS.gene54959:CDS | 50.0% | |
GCATACATGTGCCCGTACAA+TGG | + | chr7.2:23616996-23617015 | None:intergenic | 50.0% | |
GCGGATCTACTTCCTCATCA+TGG | + | chr7.2:23615805-23615824 | None:intergenic | 50.0% | |
GCTTTACGATGATTGGGAGG+TGG | - | chr7.2:23616338-23616357 | MS.gene54959:CDS | 50.0% | |
GGAGCTTTACGATGATTGGG+AGG | - | chr7.2:23616335-23616354 | MS.gene54959:CDS | 50.0% | |
GGCATACCCAAATTGCCTGT+TGG | - | chr7.2:23615557-23615576 | MS.gene54959:intron | 50.0% | |
GTTGAAGCTTAGGGCAGTGT+TGG | + | chr7.2:23616377-23616396 | None:intergenic | 50.0% | |
TGGCAACTGCCTCTTTGGTA+GGG | + | chr7.2:23615199-23615218 | None:intergenic | 50.0% | |
!! | AGGCATTGAGGAACAAGCTC+TGG | + | chr7.2:23616532-23616551 | None:intergenic | 50.0% |
ATCTTATCCACCGCTGGTGG+TGG | + | chr7.2:23615131-23615150 | None:intergenic | 55.0% | |
CCCATTCCTTCAGCGTATGG+TGG | + | chr7.2:23616154-23616173 | None:intergenic | 55.0% | |
CTGATCTTATCCACCGCTGG+TGG | + | chr7.2:23615134-23615153 | None:intergenic | 55.0% | |
CTGCTGATCTTATCCACCGC+TGG | + | chr7.2:23615137-23615156 | None:intergenic | 55.0% | |
GCTTCACAAGGAACCAACCG+AGG | + | chr7.2:23615616-23615635 | None:intergenic | 55.0% | |
GCTTGTGGCAACTGCCTCTT+TGG | + | chr7.2:23615204-23615223 | None:intergenic | 55.0% | |
GGCATGTTGCAGAGGCCTTT+GGG | + | chr7.2:23616714-23616733 | None:intergenic | 55.0% | |
GTCTCGTCTCCCTACCAAAG+AGG | - | chr7.2:23615187-23615206 | MS.gene54959:intron | 55.0% | |
GTGGCAACTGCCTCTTTGGT+AGG | + | chr7.2:23615200-23615219 | None:intergenic | 55.0% | |
TTACCGGACGCGATTCTGAG+CGG | - | chr7.2:23615158-23615177 | MS.gene54959:intron | 55.0% | |
TTGTAAGCCTCGACCTCGGT+TGG | - | chr7.2:23615600-23615619 | MS.gene54959:intron | 55.0% | |
!! | GCCGGAGAAGTTGATACCGT+CGG | + | chr7.2:23615264-23615283 | None:intergenic | 55.0% |
ATCCCGCTCAGAATCGCGTC+CGG | + | chr7.2:23615164-23615183 | None:intergenic | 60.0% | |
ATTGCACAGCCACAGGGCAG+AGG | - | chr7.2:23617030-23617049 | MS.gene54959:CDS | 60.0% | |
CAAGGAACCAACCGAGGTCG+AGG | + | chr7.2:23615610-23615629 | None:intergenic | 60.0% | |
CGGCATGTTGCAGAGGCCTT+TGG | + | chr7.2:23616715-23616734 | None:intergenic | 60.0% | |
TACCGGACGCGATTCTGAGC+GGG | - | chr7.2:23615159-23615178 | MS.gene54959:intron | 60.0% | |
TCATACACGCCTCTGCCCTG+TGG | + | chr7.2:23617042-23617061 | None:intergenic | 60.0% | |
TGCAGAGGCCTTTGGGCAAG+TGG | + | chr7.2:23616707-23616726 | None:intergenic | 60.0% | |
! | GGGCAGTGTTGGAGCACTTG+CGG | + | chr7.2:23616366-23616385 | None:intergenic | 60.0% |
!! | AGAAGCACCACCACCACCAG+CGG | - | chr7.2:23615118-23615137 | MS.gene54959:CDS | 60.0% |
!! | TTATCCACCGCTGGTGGTGG+TGG | + | chr7.2:23615128-23615147 | None:intergenic | 60.0% |
AGCACCACCACCACCAGCGG+TGG | - | chr7.2:23615121-23615140 | MS.gene54959:CDS | 70.0% | |
TTGGTCTCTCGCGACGCCGC+TGG | - | chr7.2:23615344-23615363 | MS.gene54959:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 23615092 | 23617061 | 23615092 | ID=MS.gene54959 |
chr7.2 | mRNA | 23615092 | 23617061 | 23615092 | ID=MS.gene54959.t1;Parent=MS.gene54959 |
chr7.2 | exon | 23616165 | 23617061 | 23616165 | ID=MS.gene54959.t1.exon1;Parent=MS.gene54959.t1 |
chr7.2 | CDS | 23616165 | 23617061 | 23616165 | ID=cds.MS.gene54959.t1;Parent=MS.gene54959.t1 |
chr7.2 | exon | 23615740 | 23615877 | 23615740 | ID=MS.gene54959.t1.exon2;Parent=MS.gene54959.t1 |
chr7.2 | CDS | 23615740 | 23615877 | 23615740 | ID=cds.MS.gene54959.t1;Parent=MS.gene54959.t1 |
chr7.2 | exon | 23615092 | 23615172 | 23615092 | ID=MS.gene54959.t1.exon3;Parent=MS.gene54959.t1 |
chr7.2 | CDS | 23615092 | 23615172 | 23615092 | ID=cds.MS.gene54959.t1;Parent=MS.gene54959.t1 |
Gene Sequence |
Protein sequence |