AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54959


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54959.t1 MTR_2g007450 51.873 347 147 7 1 345 1 329 7.37e-104 312
MS.gene54959.t1 MTR_7g083740 51.594 345 91 8 3 345 2 272 4.19e-96 291
MS.gene54959.t1 MTR_1g053025 49.697 330 134 8 17 345 1 299 5.80e-87 268
MS.gene54959.t1 MTR_3g026920 47.619 336 136 10 16 344 17 319 5.47e-76 240
MS.gene54959.t1 MTR_4g098590 45.260 327 138 8 20 343 1 289 5.69e-74 234
MS.gene54959.t1 MTR_2g007500 43.988 341 140 8 5 345 3 292 7.85e-71 225
MS.gene54959.t1 MTR_2g007400 40.997 361 163 12 5 359 3 319 2.06e-68 221
MS.gene54959.t1 MTR_3g107160 40.785 331 144 11 18 343 10 293 1.03e-63 208
MS.gene54959.t1 MTR_1g107385 40.356 337 165 7 18 352 32 334 3.99e-62 205
MS.gene54959.t1 MTR_5g083890 40.719 334 164 7 15 345 3 305 2.34e-59 200
MS.gene54959.t1 MTR_7g075820 38.375 357 174 10 15 369 3 315 1.60e-58 195
MS.gene54959.t1 MTR_2g005990 39.403 335 157 10 16 345 4 297 9.84e-56 187
MS.gene54959.t1 MTR_3g107100 40.122 329 148 9 18 343 11 293 4.04e-55 186
MS.gene54959.t1 MTR_3g107120 40.351 342 139 11 18 343 9 301 4.15e-54 183
MS.gene54959.t1 MTR_2g008320 36.705 346 145 13 16 345 50 337 7.03e-47 166
MS.gene54959.t1 MTR_2g008310 37.015 335 153 11 17 345 1 283 3.39e-46 162
MS.gene54959.t1 MTR_3g099830 37.237 333 139 9 16 345 10 275 4.21e-46 162
MS.gene54959.t1 MTR_2g007360 37.500 336 133 8 16 347 10 272 1.67e-44 157
MS.gene54959.t1 MTR_2g007530 38.214 280 122 9 16 255 17 285 2.22e-41 148
MS.gene54959.t1 MTR_2g007530 53.247 77 30 1 272 348 197 267 7.39e-14 72.4
MS.gene54959.t1 MTR_7g007340 35.312 337 137 10 12 345 4 262 3.61e-36 135
MS.gene54959.t1 MTR_2g007550 41.176 204 76 7 1 201 1 163 1.07e-29 117
MS.gene54959.t1 MTR_2g007550 50.485 103 50 1 243 345 148 249 1.03e-24 103
MS.gene54959.t1 MTR_7g115270 29.167 336 191 8 15 341 9 306 9.16e-28 113
MS.gene54959.t1 MTR_6g045333 30.882 340 178 11 17 345 60 353 1.50e-27 113
MS.gene54959.t1 MTR_1g041245 29.532 342 173 12 15 345 8 292 3.39e-27 111
MS.gene54959.t1 MTR_7g075800 30.659 349 190 14 15 346 6 319 1.48e-26 111
MS.gene54959.t1 MTR_3g105060 29.607 331 171 9 15 340 11 284 3.84e-26 108
MS.gene54959.t1 MTR_8g085430 33.191 235 118 7 15 242 8 210 4.81e-26 107
MS.gene54959.t1 MTR_7g032380 28.313 332 162 10 15 345 8 264 1.33e-25 106
MS.gene54959.t1 MTR_7g007370 31.928 332 127 11 17 345 16 251 4.64e-25 104
MS.gene54959.t1 MTR_5g073420 31.195 343 168 15 8 341 1 284 4.69e-25 105
MS.gene54959.t1 MTR_3g040700 29.762 336 163 14 17 343 42 313 2.74e-23 100
MS.gene54959.t1 MTR_3g082890 30.055 366 184 11 1 346 1 314 6.16e-23 99.8
MS.gene54959.t1 MTR_7g034115 30.259 347 163 14 15 345 8 291 1.38e-22 98.2
MS.gene54959.t1 MTR_5g082930 53.398 103 45 2 20 120 17 118 2.30e-22 94.0
MS.gene54959.t1 MTR_3g082890 30.137 365 183 11 1 345 81 393 2.47e-22 98.6
MS.gene54959.t1 MTR_1089s0010 27.933 358 200 11 17 369 7 311 3.69e-22 97.1
MS.gene54959.t1 MTR_7g098480 30.925 346 172 13 3 341 8 293 4.14e-22 97.8
MS.gene54959.t1 MTR_7g026500 29.769 346 195 14 6 345 2 305 8.88e-22 96.3
MS.gene54959.t1 MTR_3g071850 29.118 340 184 10 17 345 23 316 1.97e-21 96.7
MS.gene54959.t1 MTR_7g098510 31.714 350 170 17 3 343 8 297 3.36e-21 94.4
MS.gene54959.t1 MTR_7g032370 27.554 323 157 10 33 345 5 260 1.01e-20 92.4
MS.gene54959.t1 MTR_7g033990 27.479 353 178 13 16 354 9 297 1.34e-20 92.8
MS.gene54959.t1 MTR_7g056430 29.641 334 157 11 18 345 9 270 1.47e-20 94.0
MS.gene54959.t1 MTR_7g056420 29.641 334 157 11 18 345 9 270 1.82e-20 93.6
MS.gene54959.t1 MTR_7g098570 28.732 355 175 15 1 341 7 297 4.59e-20 91.7
MS.gene54959.t1 MTR_3g108150 29.282 362 174 14 13 354 4 303 6.44e-20 90.5
MS.gene54959.t1 MTR_1g108820 28.804 368 198 14 15 369 5 321 6.57e-20 90.5
MS.gene54959.t1 MTR_7g007080 27.635 351 171 13 18 348 4 291 8.30e-20 90.5
MS.gene54959.t1 MTR_5g073340 30.030 333 156 12 17 343 7 268 1.01e-19 89.0
MS.gene54959.t1 MTR_3g467400 28.571 350 188 16 17 345 2 310 1.03e-19 89.7
MS.gene54959.t1 MTR_3g036250 29.326 341 166 13 17 347 4 279 1.21e-19 89.4
MS.gene54959.t1 MTR_5g058000 28.739 341 169 12 17 345 7 285 1.64e-19 89.4
MS.gene54959.t1 MTR_1g108820 30.145 345 178 14 15 346 5 299 1.64e-19 89.0
MS.gene54959.t1 MTR_3g107140 31.839 223 114 7 27 241 1 193 3.33e-19 85.1
MS.gene54959.t1 MTR_7g056433 29.412 340 182 12 12 343 6 295 4.10e-19 88.2
MS.gene54959.t1 MTR_5g045170 29.023 348 168 14 17 345 13 300 4.19e-19 88.2
MS.gene54959.t1 MTR_5g058100 28.060 335 189 9 16 345 7 294 5.37e-19 87.8
MS.gene54959.t1 MTR_2g007460 41.322 121 50 3 16 136 10 109 1.21e-18 81.3
MS.gene54959.t1 MTR_7g055943 29.882 338 179 11 16 345 38 325 4.71e-18 85.5
MS.gene54959.t1 MTR_7g034090 37.572 173 79 4 16 184 2 149 4.88e-18 85.5
MS.gene54959.t1 MTR_6g022360 29.315 365 183 12 17 369 42 343 9.41e-18 84.3
MS.gene54959.t1 MTR_5g045510 28.571 308 172 11 14 321 8 267 1.21e-17 84.0
MS.gene54959.t1 MTR_1g066830 27.463 335 187 10 14 339 4 291 1.53e-17 83.6
MS.gene54959.t1 MTR_4g134150 28.623 276 136 9 15 286 11 229 1.80e-17 81.3
MS.gene54959.t1 MTR_7g056447 31.628 215 111 7 15 228 6 185 3.83e-17 81.3
MS.gene54959.t1 MTR_3g023630 27.027 333 176 11 17 340 7 281 5.82e-17 81.6
MS.gene54959.t1 MTR_8g445780 26.243 362 198 13 18 341 13 343 6.53e-17 81.6
MS.gene54959.t1 MTR_5g073370 29.129 333 182 12 18 345 5 288 7.54e-17 81.6
MS.gene54959.t1 MTR_5g031970 26.316 342 151 11 17 346 15 267 7.59e-17 81.3
MS.gene54959.t1 MTR_6g011460 27.761 335 185 12 17 345 45 328 8.23e-17 81.6
MS.gene54959.t1 MTR_6g040270 27.795 331 183 10 20 345 10 289 1.12e-16 80.9
MS.gene54959.t1 MTR_5g061680 26.586 331 165 9 16 341 9 266 1.52e-16 80.1
MS.gene54959.t1 MTR_0492s0020 26.558 369 176 13 3 353 75 366 2.92e-16 80.1
MS.gene54959.t1 MTR_7g088260 27.747 364 195 14 18 369 91 398 3.06e-16 80.1
MS.gene54959.t1 MTR_0543s0010 26.558 369 176 13 3 353 75 366 4.58e-16 79.7
MS.gene54959.t1 MTR_6g022500 26.409 337 190 12 17 345 100 386 9.79e-16 78.6
MS.gene54959.t1 MTR_8g077460 28.652 356 184 14 18 363 10 305 1.00e-15 78.2
MS.gene54959.t1 MTR_7g056280 33.166 199 105 7 20 218 8 178 1.95e-15 78.2
MS.gene54959.t1 MTR_5g008920 26.113 337 186 10 16 345 10 290 2.21e-15 77.4
MS.gene54959.t1 MTR_8g062010 30.472 233 115 10 1 228 1 191 2.39e-15 77.4
MS.gene54959.t1 MTR_6g013160 26.562 384 202 12 11 346 2 353 3.12e-15 77.0
MS.gene54959.t1 MTR_7g033470 37.607 117 68 2 8 120 4 119 4.26e-15 72.0
MS.gene54959.t1 MTR_5g007410 28.402 338 182 14 20 345 28 317 6.83e-15 76.3
MS.gene54959.t1 MTR_1g492880 47.727 88 42 2 18 105 6 89 9.07e-15 70.1
MS.gene54959.t1 MTR_1g492880 47.727 88 42 2 18 105 6 89 9.21e-15 69.7
MS.gene54959.t1 MTR_5g084070 24.611 386 202 12 1 346 1 337 2.12e-14 74.7
MS.gene54959.t1 MTR_2g036470 27.168 346 194 11 16 351 12 309 2.18e-14 74.3
MS.gene54959.t1 MTR_7g034110 23.684 342 168 10 15 354 8 258 2.37e-14 73.9
MS.gene54959.t1 MTR_1g013560 27.731 238 142 9 1 235 1 211 3.98e-14 73.2
MS.gene54959.t1 MTR_8g062080 31.855 248 124 13 1 239 6 217 5.00e-14 73.6
MS.gene54959.t1 MTR_1g013560 27.731 238 142 9 1 235 1 211 7.86e-14 72.8
MS.gene54959.t1 MTR_8g062310 26.809 235 131 7 4 236 11 206 9.25e-14 72.4
MS.gene54959.t1 MTR_8g468760 28.251 223 130 8 16 232 7 205 1.63e-13 71.6
MS.gene54959.t1 MTR_8g058970 28.916 249 132 10 5 233 6 229 1.77e-13 72.0
MS.gene54959.t1 MTR_2g082800 31.915 141 82 4 1 138 9 138 5.35e-13 70.1
MS.gene54959.t1 MTR_1g014450 28.311 219 131 7 18 235 16 209 5.59e-13 70.1
MS.gene54959.t1 MTR_7g114710 26.627 338 161 13 15 343 10 269 5.82e-13 69.7
MS.gene54959.t1 MTR_6g029350 38.583 127 58 3 219 345 1 107 5.98e-13 68.2
MS.gene54959.t1 MTR_2g091145 26.809 235 145 7 1 233 3 212 7.17e-13 69.7
MS.gene54959.t1 MTR_5g039490 27.336 289 165 11 2 285 6 254 1.01e-12 69.3
MS.gene54959.t1 MTR_3g048290 26.984 252 139 7 17 259 22 237 1.04e-12 69.7
MS.gene54959.t1 MTR_8g058965 31.004 229 119 9 16 230 11 214 1.39e-12 68.9
MS.gene54959.t1 MTR_7g060470 26.513 347 178 13 18 340 3 296 1.77e-12 68.6
MS.gene54959.t1 MTR_3g110010 30.233 215 110 6 18 230 13 189 5.69e-12 67.8
MS.gene54959.t1 MTR_7g090750 32.258 217 121 6 17 233 10 200 7.39e-12 66.6
MS.gene54959.t1 MTR_3g114200 30.526 190 89 6 1 180 1 157 7.73e-12 63.5
MS.gene54959.t1 MTR_3g109982 29.493 217 113 6 18 232 13 191 8.06e-12 67.0
MS.gene54959.t1 MTR_2g047858 28.326 233 137 8 5 235 101 305 8.54e-12 66.6
MS.gene54959.t1 MTR_3g113782 45.349 86 38 3 1 78 1 85 1.09e-11 60.8
MS.gene54959.t1 MTR_2g082880 30.894 123 71 2 18 138 10 120 1.61e-11 65.9
MS.gene54959.t1 MTR_2g082860 49.206 63 31 1 1 62 9 71 1.68e-11 61.6
MS.gene54959.t1 MTR_2g082850 32.432 148 72 6 1 138 9 138 1.97e-11 65.1
MS.gene54959.t1 MTR_2g008300 51.389 72 29 1 170 241 4 69 2.19e-11 59.3
MS.gene54959.t1 MTR_2g007100 47.368 76 35 2 17 87 1 76 2.91e-11 59.3
MS.gene54959.t1 MTR_8g467800 29.661 236 134 9 2 235 3 208 3.29e-11 64.3
MS.gene54959.t1 MTR_4g032730 27.948 229 130 8 17 237 14 215 3.49e-11 64.7
MS.gene54959.t1 MTR_4g080773 24.561 399 186 15 18 343 19 375 3.64e-11 64.7
MS.gene54959.t1 MTR_4g080773 24.561 399 186 15 18 343 19 375 3.81e-11 64.7
MS.gene54959.t1 MTR_5g076150 31.325 166 84 7 193 339 46 200 4.97e-11 62.8
MS.gene54959.t1 MTR_8g467800 29.661 236 134 9 2 235 3 208 5.77e-11 63.9
MS.gene54959.t1 MTR_8g062270 24.464 233 145 7 16 243 14 220 7.83e-11 63.5
MS.gene54959.t1 MTR_8g469020 28.889 225 135 8 14 230 3 210 9.08e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54959.t1 AT1G16930 27.200 375 185 11 18 341 15 352 5.23e-24 103
MS.gene54959.t1 AT1G16930 27.200 375 185 11 18 341 15 352 5.23e-24 103
MS.gene54959.t1 AT1G16930 27.200 375 185 11 18 341 15 352 5.23e-24 103
MS.gene54959.t1 AT1G78750 29.146 398 190 17 2 341 3 366 6.52e-24 102
MS.gene54959.t1 AT1G78750 29.146 398 190 17 2 341 3 366 6.52e-24 102
MS.gene54959.t1 AT4G13985 28.021 389 205 14 4 343 5 367 8.68e-23 99.8
MS.gene54959.t1 AT3G60040 26.260 377 197 13 18 341 13 361 2.15e-18 87.0
MS.gene54959.t1 AT3G60040 26.260 377 197 13 18 341 232 580 4.04e-18 86.7
MS.gene54959.t1 AT3G60040 26.260 377 197 13 18 341 233 581 4.15e-18 86.7
MS.gene54959.t1 AT3G52680 26.039 361 201 13 18 347 21 346 4.28e-18 85.1
MS.gene54959.t1 AT3G60040 26.260 377 197 13 18 341 230 578 4.49e-18 86.3
MS.gene54959.t1 AT3G60040 26.260 377 197 13 18 341 232 580 4.67e-18 86.3
MS.gene54959.t1 AT4G00160 27.577 359 192 13 18 343 16 339 5.74e-18 85.5
MS.gene54959.t1 AT3G58860 26.287 369 199 13 17 343 6 343 7.63e-18 85.1
MS.gene54959.t1 AT3G52680 26.331 357 197 13 18 343 21 342 9.14e-18 84.7
MS.gene54959.t1 AT3G26922 32.407 216 110 6 18 232 14 194 9.83e-18 83.2
MS.gene54959.t1 AT3G26922 32.407 216 110 6 18 232 14 194 9.83e-18 83.2
MS.gene54959.t1 AT1G69630 27.889 398 191 16 1 341 1 359 1.08e-17 84.7
MS.gene54959.t1 AT4G14103 27.366 391 185 13 18 348 8 359 1.22e-17 84.3
MS.gene54959.t1 AT4G14103 27.344 384 180 13 18 341 8 352 2.39e-17 83.2
MS.gene54959.t1 AT4G14103 27.344 384 180 13 18 341 8 352 2.39e-17 83.2
MS.gene54959.t1 AT3G58940 25.737 373 191 15 17 341 1 335 3.04e-17 83.6
MS.gene54959.t1 AT3G58940 25.737 373 191 15 17 341 1 335 3.04e-17 83.6
MS.gene54959.t1 AT2G26860 31.019 216 121 5 17 232 1 188 6.68e-17 82.0
MS.gene54959.t1 AT2G26860 31.019 216 121 5 17 232 1 188 6.68e-17 82.0
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 7.28e-17 80.9
MS.gene54959.t1 AT4G26340 27.374 358 193 12 17 343 1 322 1.27e-16 81.3
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 1.36e-16 80.5
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 1.36e-16 80.5
MS.gene54959.t1 AT1G51370 24.619 394 200 14 2 350 4 345 1.57e-16 80.5
MS.gene54959.t1 AT1G51370 25.131 382 190 13 18 354 19 349 1.78e-16 80.9
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 1.80e-16 80.5
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 1.80e-16 80.5
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 1.80e-16 80.5
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 1.80e-16 80.5
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 21 211 1.96e-16 80.5
MS.gene54959.t1 AT3G59190 25.183 409 203 14 18 359 12 384 2.11e-16 80.5
MS.gene54959.t1 AT1G51370 24.623 398 203 14 2 354 4 349 2.15e-16 80.5
MS.gene54959.t1 AT1G06630 33.180 217 115 7 18 230 12 202 2.20e-16 80.9
MS.gene54959.t1 AT3G59200 24.173 393 201 13 18 346 7 366 3.50e-16 80.1
MS.gene54959.t1 AT3G59200 25.641 390 193 15 18 343 7 363 4.16e-16 79.3
MS.gene54959.t1 AT3G42770 30.568 229 123 6 20 238 1 203 2.42e-15 77.8
MS.gene54959.t1 AT5G22660 25.521 384 187 13 18 343 13 355 2.56e-15 77.4
MS.gene54959.t1 AT3G58880 26.166 386 202 12 17 349 2 357 2.87e-15 77.4
MS.gene54959.t1 AT3G59190 25.320 391 190 13 18 341 12 367 3.73e-15 77.0
MS.gene54959.t1 AT3G44060 30.876 217 122 4 20 236 1 189 4.30e-15 76.6
MS.gene54959.t1 AT5G22720 27.586 232 132 6 18 248 23 219 6.42e-15 76.3
MS.gene54959.t1 AT1G66290 25.000 404 199 14 2 343 5 366 1.49e-14 75.1
MS.gene54959.t1 AT4G14096 26.344 372 192 13 18 341 8 345 1.60e-14 75.1
MS.gene54959.t1 AT4G14096 26.344 372 192 13 18 341 8 345 1.60e-14 75.1
MS.gene54959.t1 AT5G22660 29.412 221 110 6 18 233 13 192 2.21e-14 73.6
MS.gene54959.t1 AT1G13780 28.958 259 136 12 10 256 2 224 2.56e-14 73.6
MS.gene54959.t1 AT1G78760 28.782 271 131 11 4 266 8 224 2.66e-14 74.3
MS.gene54959.t1 AT1G13780 28.958 259 136 12 10 256 2 224 2.79e-14 74.3
MS.gene54959.t1 AT5G41630 30.213 235 136 8 18 247 12 223 3.40e-14 73.9
MS.gene54959.t1 AT3G58900 25.000 388 196 14 17 341 1 356 4.07e-14 73.9
MS.gene54959.t1 AT3G59210 29.596 223 125 6 18 237 7 200 4.18e-14 73.9
MS.gene54959.t1 AT3G59210 29.596 223 125 6 18 237 7 200 4.18e-14 73.9
MS.gene54959.t1 AT3G59210 29.596 223 125 6 18 237 7 200 4.18e-14 73.9
MS.gene54959.t1 AT3G59210 29.596 223 125 6 18 237 7 200 4.18e-14 73.9
MS.gene54959.t1 AT3G59210 29.596 223 125 6 18 237 7 200 4.18e-14 73.9
MS.gene54959.t1 AT4G13965 30.455 220 107 6 18 232 10 188 8.18e-14 72.8
MS.gene54959.t1 AT5G53840 26.688 311 178 10 18 319 18 287 9.56e-14 72.8
MS.gene54959.t1 AT1G66320 24.074 378 185 15 23 341 35 369 2.73e-13 71.2
MS.gene54959.t1 AT1G66300 23.457 405 204 17 2 341 5 368 3.26e-13 70.9
MS.gene54959.t1 AT5G60610 29.358 218 113 6 17 232 1 179 4.24e-13 70.5
MS.gene54959.t1 AT5G60610 29.358 218 113 6 17 232 1 179 4.24e-13 70.5
MS.gene54959.t1 AT5G25850 28.270 237 123 9 1 232 2 196 6.26e-13 70.1
MS.gene54959.t1 AT3G59160 28.992 238 115 7 18 230 13 221 6.38e-13 70.1
MS.gene54959.t1 AT5G56440 29.224 219 113 5 17 230 1 182 6.58e-13 70.1
MS.gene54959.t1 AT4G26350 27.731 238 132 7 17 252 1 200 8.43e-13 69.7
MS.gene54959.t1 AT5G44950 28.767 219 117 7 18 233 4 186 9.41e-13 69.7
MS.gene54959.t1 AT5G56410 29.911 224 128 5 17 232 1 203 9.87e-13 69.7
MS.gene54959.t1 AT3G44810 31.797 217 117 9 20 232 9 198 1.18e-12 69.3
MS.gene54959.t1 AT3G58900 29.091 275 146 10 17 287 1 230 1.72e-12 68.2
MS.gene54959.t1 AT5G22700 27.246 345 189 13 18 343 43 344 1.80e-12 68.6
MS.gene54959.t1 AT4G10400 29.386 228 118 8 17 239 1 190 2.30e-12 68.2
MS.gene54959.t1 AT4G10400 29.386 228 118 8 17 239 1 190 2.30e-12 68.2
MS.gene54959.t1 AT4G10400 29.386 228 118 8 17 239 1 190 2.30e-12 68.2
MS.gene54959.t1 AT3G58900 29.091 275 146 10 17 287 1 230 2.40e-12 67.8
MS.gene54959.t1 AT3G58900 29.091 275 146 10 17 287 1 230 2.40e-12 67.8
MS.gene54959.t1 AT3G51530 28.692 237 127 9 9 243 21 217 2.65e-12 68.2
MS.gene54959.t1 AT2G04230 30.594 219 117 8 18 232 13 200 3.04e-12 68.2
MS.gene54959.t1 AT5G41840 27.119 236 136 7 18 243 14 223 3.07e-12 68.2
MS.gene54959.t1 AT3G58930 23.678 397 200 17 17 341 1 366 3.23e-12 68.2
MS.gene54959.t1 AT3G58930 23.678 397 200 17 17 341 1 366 3.23e-12 68.2
MS.gene54959.t1 AT3G58930 23.678 397 200 17 17 341 1 366 3.23e-12 68.2
MS.gene54959.t1 AT5G56370 24.576 354 211 10 17 348 1 320 3.29e-12 67.4
MS.gene54959.t1 AT1G66310 22.588 425 216 11 5 371 6 375 3.93e-12 67.8
MS.gene54959.t1 AT1G48400 31.481 216 115 7 18 230 10 195 4.31e-12 67.8
MS.gene54959.t1 AT5G22610 24.576 354 209 10 18 343 18 341 4.59e-12 67.4
MS.gene54959.t1 AT5G22700 29.091 220 116 6 18 235 6 187 5.13e-12 67.4
MS.gene54959.t1 AT5G22700 29.091 220 116 6 18 235 6 187 5.13e-12 67.4
MS.gene54959.t1 AT5G22700 29.091 220 116 6 18 235 6 187 5.13e-12 67.4
MS.gene54959.t1 AT5G22700 29.091 220 116 6 18 235 6 187 5.13e-12 67.4
MS.gene54959.t1 AT4G27050 29.730 222 125 7 17 230 3 201 5.14e-12 67.4
MS.gene54959.t1 AT4G27050 29.730 222 125 7 17 230 3 201 5.14e-12 67.4
MS.gene54959.t1 AT4G27050 29.730 222 125 7 17 230 3 201 5.14e-12 67.4
MS.gene54959.t1 AT4G27050 29.730 222 125 7 17 230 3 201 5.14e-12 67.4
MS.gene54959.t1 AT4G27050 29.730 222 125 7 17 230 3 201 5.14e-12 67.4
MS.gene54959.t1 AT3G26922 30.151 199 103 6 35 232 2 165 5.16e-12 66.2
MS.gene54959.t1 AT3G26922 30.151 199 103 6 35 232 2 165 5.16e-12 66.2
MS.gene54959.t1 AT5G22700 29.091 220 116 6 18 235 43 224 5.23e-12 67.4
MS.gene54959.t1 AT1G48400 31.481 216 115 7 18 230 10 195 6.07e-12 67.4
MS.gene54959.t1 AT5G22670 31.336 217 109 7 18 232 11 189 6.46e-12 67.0
MS.gene54959.t1 AT3G59170 25.908 413 184 15 18 341 7 386 8.95e-12 66.6
MS.gene54959.t1 AT1G78840 25.066 379 178 15 23 344 11 340 1.03e-11 66.2
MS.gene54959.t1 AT1G78840 25.066 379 178 15 23 344 11 340 1.03e-11 66.2
MS.gene54959.t1 AT3G59000 28.390 236 138 7 17 238 1 219 1.19e-11 65.9
MS.gene54959.t1 AT5G53640 26.587 252 125 9 4 242 3 207 1.33e-11 64.3
MS.gene54959.t1 AT5G56370 29.717 212 115 5 17 228 1 178 1.79e-11 65.5
MS.gene54959.t1 AT5G56370 29.717 212 115 5 17 228 1 178 1.79e-11 65.5
MS.gene54959.t1 AT3G49040 30.455 220 112 8 18 232 17 200 1.94e-11 64.7
MS.gene54959.t1 AT5G18780 26.033 242 139 6 18 257 11 214 2.04e-11 65.1
MS.gene54959.t1 AT5G18780 26.033 242 139 6 18 257 11 214 2.04e-11 65.1
MS.gene54959.t1 AT4G09920 28.378 222 117 7 17 233 1 185 2.31e-11 64.7
MS.gene54959.t1 AT4G09920 28.378 222 117 7 17 233 1 185 2.31e-11 64.7
MS.gene54959.t1 AT5G18780 26.033 242 139 6 18 257 11 214 3.43e-11 64.7
MS.gene54959.t1 AT5G18780 26.033 242 139 6 18 257 11 214 3.43e-11 64.7
MS.gene54959.t1 AT4G09920 27.049 244 136 7 17 255 1 207 3.46e-11 63.9
MS.gene54959.t1 AT4G09920 27.049 244 136 7 17 255 1 207 3.46e-11 63.9
MS.gene54959.t1 AT4G09920 27.049 244 136 7 17 255 1 207 3.46e-11 63.9
MS.gene54959.t1 AT1G80470 28.448 232 115 9 18 240 15 204 4.08e-11 64.7
MS.gene54959.t1 AT3G58960 24.485 388 191 16 17 341 1 349 7.81e-11 63.9

Find 81 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATGTGCACTAATCAATT+TGG 0.235682 7.2:+23616273 None:intergenic
GAGAATACCAACAGGCAATT+TGG 0.253860 7.2:+23616567 None:intergenic
ATTAGATTTGGATTTGGATT+TGG 0.281235 7.2:-23616478 MS.gene54959:CDS
TTTGGATTTGGATTTGGATT+TGG 0.293606 7.2:-23616472 MS.gene54959:CDS
TGAGTCTATATACTCAATTT+TGG 0.296206 7.2:-23616806 MS.gene54959:CDS
GATTCTTCTTCTATTAGATT+TGG 0.302275 7.2:-23616490 MS.gene54959:CDS
GCTTGTGGCAACTGCCTCTT+TGG 0.307775 7.2:+23616930 None:intergenic
TTTAGTCTCGAAATTGAATA+TGG 0.325057 7.2:-23616745 MS.gene54959:CDS
TCTTCTATTAGATTTGGATT+TGG 0.328909 7.2:-23616484 MS.gene54959:CDS
ATCACTCAATGTCCTTCATT+TGG 0.329833 7.2:-23616443 MS.gene54959:CDS
TATGATCTAGCCTTACGTTT+TGG 0.357736 7.2:-23616718 MS.gene54959:CDS
ACTCGTAGATGCTCAAGATT+TGG 0.374943 7.2:+23616367 None:intergenic
GGATAAGATCAGCAGTTTAC+CGG 0.376662 7.2:-23616989 MS.gene54959:CDS
GATTGGAGCTTTACGATGAT+TGG 0.378888 7.2:-23615800 MS.gene54959:CDS
CGGGACAAATTATGAAAGAT+AGG 0.382552 7.2:+23615822 None:intergenic
AAAAGATCACAAATTCTTCC+AGG 0.388189 7.2:-23616164 MS.gene54959:intron
AGAATACCAACAGGCAATTT+GGG 0.388460 7.2:+23616568 None:intergenic
AGTTCGAGATGTTGAAGCTT+AGG 0.389430 7.2:+23615747 None:intergenic
TTGGTCTCTCGCGACGCCGC+TGG 0.397259 7.2:-23616787 MS.gene54959:CDS
CAAAGAGATGGACTCATCTC+TGG 0.411250 7.2:-23616900 MS.gene54959:CDS
CTTTCATAATTTGTCCCGAT+TGG 0.417482 7.2:-23615817 MS.gene54959:CDS
ATATGTGCACTAATCAATTT+GGG 0.422506 7.2:+23616274 None:intergenic
GCATTCACAACGTCAACAAA+TGG 0.428875 7.2:-23616696 MS.gene54959:CDS
GTGGCAACTGCCTCTTTGGT+AGG 0.428995 7.2:+23616934 None:intergenic
ATTGGAGCTTTACGATGATT+GGG 0.449702 7.2:-23615799 MS.gene54959:CDS
GTTCGAGATGTTGAAGCTTA+GGG 0.452873 7.2:+23615748 None:intergenic
ATCAAGGTTCATCCATTGTA+CGG 0.465478 7.2:-23615150 MS.gene54959:CDS
TCAACATCTCGAACTTTACA+AGG 0.468919 7.2:-23615739 MS.gene54959:intron
CTTGAGCATCTACGAGTTGT+GGG 0.478913 7.2:-23616361 MS.gene54959:CDS
ATCTTATCCACCGCTGGTGG+TGG 0.483228 7.2:+23617003 None:intergenic
TGGCAACTGCCTCTTTGGTA+GGG 0.485980 7.2:+23616935 None:intergenic
AGACTTGATTGCACAGCCAC+AGG 0.489740 7.2:-23615108 MS.gene54959:CDS
GTTGAAGCTTAGGGCAGTGT+TGG 0.492971 7.2:+23615757 None:intergenic
AATCATCGTAAAGCTCCAAT+CGG 0.505933 7.2:+23615802 None:intergenic
TTATCCACCGCTGGTGGTGG+TGG 0.512107 7.2:+23617006 None:intergenic
TACCGGACGCGATTCTGAGC+GGG 0.516154 7.2:-23616972 MS.gene54959:CDS
TCTTGAGCATCTACGAGTTG+TGG 0.523909 7.2:-23616362 MS.gene54959:CDS
CAGGGCAGAGGCGTGTATGA+AGG 0.527197 7.2:-23615089 None:intergenic
GCGGATCTACTTCCTCATCA+TGG 0.529242 7.2:+23616329 None:intergenic
ACCGACGGTATCAACTTCTC+CGG 0.535091 7.2:-23616871 MS.gene54959:CDS
ATCATCGTAAAGCTCCAATC+GGG 0.537395 7.2:+23615803 None:intergenic
AGATCACATTGTCCAAATGA+AGG 0.538608 7.2:+23616431 None:intergenic
CAAGGAACCAACCGAGGTCG+AGG 0.544035 7.2:+23616524 None:intergenic
ATCCCGCTCAGAATCGCGTC+CGG 0.546632 7.2:+23616970 None:intergenic
CTGCTGATCTTATCCACCGC+TGG 0.548082 7.2:+23616997 None:intergenic
GTTGTGAATGCCAAAACGTA+AGG 0.555391 7.2:+23616708 None:intergenic
ATTGCACAGCCACAGGGCAG+AGG 0.558750 7.2:-23615101 MS.gene54959:CDS
GGCATACCCAAATTGCCTGT+TGG 0.566943 7.2:-23616574 MS.gene54959:CDS
TCAAGGTTCATCCATTGTAC+GGG 0.571360 7.2:-23615149 MS.gene54959:CDS
AAGAAGAAATGGGGCGACGG+AGG 0.571428 7.2:-23617047 None:intergenic
GGGCAGTGTTGGAGCACTTG+CGG 0.573680 7.2:+23615768 None:intergenic
CAAGCATTCTGTCAAAGAGA+TGG 0.573974 7.2:-23616912 MS.gene54959:CDS
TTAAACTCTTGAATGAATAG+CGG 0.574225 7.2:+23616310 None:intergenic
AACAAGAAGAAATGGGGCGA+CGG 0.574256 7.2:-23617050 None:intergenic
TCTCTTTGACAGAATGCTTG+TGG 0.575936 7.2:+23616915 None:intergenic
GTACATGTGAGAATACCAAC+AGG 0.579568 7.2:+23616559 None:intergenic
AAATTAGATAGTGCTTTCAA+CGG 0.589096 7.2:+23616223 None:intergenic
GCTTTACGATGATTGGGAGG+TGG 0.590171 7.2:-23615793 MS.gene54959:CDS
GTCTCGTCTCCCTACCAAAG+AGG 0.593043 7.2:-23616944 MS.gene54959:CDS
TTGTAAGCCTCGACCTCGGT+TGG 0.593890 7.2:-23616531 MS.gene54959:CDS
AAATGAAGGACATTGAGTGA+TGG 0.599122 7.2:+23616445 None:intergenic
AGCACCACCACCACCAGCGG+TGG 0.617768 7.2:-23617010 MS.gene54959:CDS
GACTTGATTGCACAGCCACA+GGG 0.622709 7.2:-23615107 MS.gene54959:CDS
GTTATTCACTGTGATGATGC+CGG 0.628120 7.2:+23616852 None:intergenic
CTAATAGAAGAAGAATCGAA+AGG 0.629105 7.2:+23616496 None:intergenic
AGATAGGAATATCATCGTAA+CGG 0.630870 7.2:+23615838 None:intergenic
AAGAATCGAAAGGCTTCACA+AGG 0.633081 7.2:+23616506 None:intergenic
AGAAGCACCACCACCACCAG+CGG 0.633130 7.2:-23617013 MS.gene54959:CDS
GCATACATGTGCCCGTACAA+TGG 0.635239 7.2:+23615138 None:intergenic
CAAGGCTATTCACACTGACG+TGG 0.636781 7.2:+23616632 None:intergenic
GCCGGAGAAGTTGATACCGT+CGG 0.639653 7.2:+23616870 None:intergenic
CTGATCTTATCCACCGCTGG+TGG 0.645294 7.2:+23617000 None:intergenic
TATCTAATTTGAAGTCTCTG+AGG 0.648071 7.2:-23616210 MS.gene54959:CDS
GGAGCTTTACGATGATTGGG+AGG 0.649670 7.2:-23615796 MS.gene54959:CDS
CATCTCTGGAAATTTACCGA+CGG 0.653189 7.2:-23616886 MS.gene54959:CDS
ATCGATGAAATGAGAGCCAG+CGG 0.657046 7.2:+23616771 None:intergenic
GGGTATATACTTCCATGATG+AGG 0.659733 7.2:-23616341 MS.gene54959:CDS
GCTTCACAAGGAACCAACCG+AGG 0.686050 7.2:+23616518 None:intergenic
TCATACACGCCTCTGCCCTG+TGG 0.686102 7.2:+23615092 None:intergenic
ACACTTGTAAGCCTCGACCT+CGG 0.696576 7.2:-23616535 MS.gene54959:CDS
TTACCGGACGCGATTCTGAG+CGG 0.700251 7.2:-23616973 MS.gene54959:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATATAAATAAAAAGTT+AGG + chr7.2:23616924-23616943 None:intergenic 10.0%
!! TGTATATAAATAAAAAGTTA+GGG + chr7.2:23616923-23616942 None:intergenic 10.0%
!! AAAAGAAAAAAGAAAAAACA+TGG + chr7.2:23616209-23616228 None:intergenic 15.0%
!! GTTATCAATAAAATAAAAGT+CGG + chr7.2:23616735-23616754 None:intergenic 15.0%
!! AAAAAGATGATGAAGAAAAT+TGG - chr7.2:23616500-23616519 MS.gene54959:CDS 20.0%
!! AAAAGATGATGAAGAAAATT+GGG - chr7.2:23616501-23616520 MS.gene54959:CDS 20.0%
!! ATAAATAAATAAAACGAACC+TGG + chr7.2:23615988-23616007 None:intergenic 20.0%
!! TAGTTATGTGCAATATTAAT+AGG - chr7.2:23616477-23616496 MS.gene54959:CDS 20.0%
!! TATAATCAAATTGGAGAAAA+CGG + chr7.2:23616112-23616131 None:intergenic 20.0%
!! TGTAATCAATTGTGTTATAT+TGG + chr7.2:23616061-23616080 None:intergenic 20.0%
!!! AGCAAAATATATTTTGATGA+AGG - chr7.2:23616615-23616634 MS.gene54959:CDS 20.0%
!!! GACAATTTTCTTTTGATTTT+AGG + chr7.2:23616685-23616704 None:intergenic 20.0%
! AAATTAGATAGTGCTTTCAA+CGG + chr7.2:23615911-23615930 None:intergenic 25.0%
! AAGAAAAGATAAACCGAATA+TGG + chr7.2:23616442-23616461 None:intergenic 25.0%
! AGACAGTATTATATAGATTG+AGG + chr7.2:23616034-23616053 None:intergenic 25.0%
! ATATGTGCACTAATCAATTT+GGG + chr7.2:23615860-23615879 None:intergenic 25.0%
! ATCTAATTGAAGTCATAAAC+AGG + chr7.2:23616963-23616982 None:intergenic 25.0%
! ATTAGATTTGGATTTGGATT+TGG - chr7.2:23615653-23615672 MS.gene54959:intron 25.0%
! ATTGCACATAACTAAAGTTA+AGG + chr7.2:23616471-23616490 None:intergenic 25.0%
! GATTCTTCTTCTATTAGATT+TGG - chr7.2:23615641-23615660 MS.gene54959:intron 25.0%
! TAAGAAGTAAGAACCATATT+CGG - chr7.2:23616426-23616445 MS.gene54959:CDS 25.0%
! TCTTCTATTAGATTTGGATT+TGG - chr7.2:23615647-23615666 MS.gene54959:intron 25.0%
! TTAAACTCTTGAATGAATAG+CGG + chr7.2:23615824-23615843 None:intergenic 25.0%
! TTATGACTTCAATTAGATCA+AGG - chr7.2:23616965-23616984 MS.gene54959:CDS 25.0%
! TTTAGTCTCGAAATTGAATA+TGG - chr7.2:23615386-23615405 MS.gene54959:intron 25.0%
!! TGAGTCTATATACTCAATTT+TGG - chr7.2:23615325-23615344 MS.gene54959:intron 25.0%
!! TTTTACAAATCATGGAAATC+TGG - chr7.2:23616644-23616663 MS.gene54959:CDS 25.0%
!!! CTGTTTTATTAGCTTCTATT+TGG - chr7.2:23616794-23616813 MS.gene54959:CDS 25.0%
AAAAGATCACAAATTCTTCC+AGG - chr7.2:23615967-23615986 MS.gene54959:intron 30.0%
AAAGACACACTATCAAATTG+GGG + chr7.2:23616243-23616262 None:intergenic 30.0%
AGATAGGAATATCATCGTAA+CGG + chr7.2:23616296-23616315 None:intergenic 30.0%
CTAATAGAAGAAGAATCGAA+AGG + chr7.2:23615638-23615657 None:intergenic 30.0%
GAAAGACACACTATCAAATT+GGG + chr7.2:23616244-23616263 None:intergenic 30.0%
GATATGTGCACTAATCAATT+TGG + chr7.2:23615861-23615880 None:intergenic 30.0%
GGACTGACATATAATCAAAT+TGG + chr7.2:23616121-23616140 None:intergenic 30.0%
TTTGGATTTGGATTTGGATT+TGG - chr7.2:23615659-23615678 MS.gene54959:intron 30.0%
! GATGATGATGATGATGAATA+TGG - chr7.2:23615536-23615555 MS.gene54959:intron 30.0%
! GGCAAGAATTTTACAAATCA+TGG - chr7.2:23616636-23616655 MS.gene54959:CDS 30.0%
! TATCTAATTTGAAGTCTCTG+AGG - chr7.2:23615921-23615940 MS.gene54959:intron 30.0%
!!! GATTTTTTGTTGCTTTTAGC+TGG - chr7.2:23615737-23615756 MS.gene54959:intron 30.0%
AAATGAAGGACATTGAGTGA+TGG + chr7.2:23615689-23615708 None:intergenic 35.0%
AAGCTAATAAAACAGCAAGC+AGG + chr7.2:23616789-23616808 None:intergenic 35.0%
AATCATCGTAAAGCTCCAAT+CGG + chr7.2:23616332-23616351 None:intergenic 35.0%
AGAATACCAACAGGCAATTT+GGG + chr7.2:23615566-23615585 None:intergenic 35.0%
AGATCACATTGTCCAAATGA+AGG + chr7.2:23615703-23615722 None:intergenic 35.0%
AGATGATGAAGAAAATTGGG+TGG - chr7.2:23616504-23616523 MS.gene54959:CDS 35.0%
ATCAAGGTTCATCCATTGTA+CGG - chr7.2:23616981-23617000 MS.gene54959:CDS 35.0%
ATCACTCAATGTCCTTCATT+TGG - chr7.2:23615688-23615707 MS.gene54959:intron 35.0%
ATTGGAGCTTTACGATGATT+GGG - chr7.2:23616332-23616351 MS.gene54959:CDS 35.0%
CATCATCATCATCATCATCA+AGG + chr7.2:23615520-23615539 None:intergenic 35.0%
CATGAATAGTGCAAGTTCTA+AGG + chr7.2:23616564-23616583 None:intergenic 35.0%
CGAAAGACACACTATCAAAT+TGG + chr7.2:23616245-23616264 None:intergenic 35.0%
CGGGACAAATTATGAAAGAT+AGG + chr7.2:23616312-23616331 None:intergenic 35.0%
TCAACATCTCGAACTTTACA+AGG - chr7.2:23616392-23616411 MS.gene54959:CDS 35.0%
TGTGTCTTTCGACATAATTC+AGG - chr7.2:23616254-23616273 MS.gene54959:CDS 35.0%
! CATGGAAATCTGGAACAAAT+GGG - chr7.2:23616654-23616673 MS.gene54959:CDS 35.0%
! CTTTCATAATTTGTCCCGAT+TGG - chr7.2:23616314-23616333 MS.gene54959:CDS 35.0%
! TCATGGAAATCTGGAACAAA+TGG - chr7.2:23616653-23616672 MS.gene54959:CDS 35.0%
! TGCACTATTCATGACTTTTC+AGG - chr7.2:23616571-23616590 MS.gene54959:CDS 35.0%
!! AAGTTCTAAGGTATGATGAC+AGG + chr7.2:23616552-23616571 None:intergenic 35.0%
!!! TATGATCTAGCCTTACGTTT+TGG - chr7.2:23615413-23615432 MS.gene54959:intron 35.0%
AAAATTGTCCACTTGCCCAA+AGG - chr7.2:23616696-23616715 MS.gene54959:CDS 40.0%
AAGAATCGAAAGGCTTCACA+AGG + chr7.2:23615628-23615647 None:intergenic 40.0%
ACTCGTAGATGCTCAAGATT+TGG + chr7.2:23615767-23615786 None:intergenic 40.0%
AGTTCGAGATGTTGAAGCTT+AGG + chr7.2:23616387-23616406 None:intergenic 40.0%
ATCATCGTAAAGCTCCAATC+GGG + chr7.2:23616331-23616350 None:intergenic 40.0%
CAAGCATTCTGTCAAAGAGA+TGG - chr7.2:23615219-23615238 MS.gene54959:intron 40.0%
GAGAATACCAACAGGCAATT+TGG + chr7.2:23615567-23615586 None:intergenic 40.0%
GATTGGAGCTTTACGATGAT+TGG - chr7.2:23616331-23616350 MS.gene54959:CDS 40.0%
GCATTCACAACGTCAACAAA+TGG - chr7.2:23615435-23615454 MS.gene54959:intron 40.0%
GGATAAGATCAGCAGTTTAC+CGG - chr7.2:23615142-23615161 MS.gene54959:CDS 40.0%
GGGTATATACTTCCATGATG+AGG - chr7.2:23615790-23615809 MS.gene54959:CDS 40.0%
GTACATGTGAGAATACCAAC+AGG + chr7.2:23615575-23615594 None:intergenic 40.0%
GTTCGAGATGTTGAAGCTTA+GGG + chr7.2:23616386-23616405 None:intergenic 40.0%
GTTGTGAATGCCAAAACGTA+AGG + chr7.2:23615426-23615445 None:intergenic 40.0%
TCAAGGTTCATCCATTGTAC+GGG - chr7.2:23616982-23617001 MS.gene54959:CDS 40.0%
TCTCTTTGACAGAATGCTTG+TGG + chr7.2:23615219-23615238 None:intergenic 40.0%
! CATCTCTGGAAATTTACCGA+CGG - chr7.2:23615245-23615264 MS.gene54959:intron 40.0%
! GTTATTCACTGTGATGATGC+CGG + chr7.2:23615282-23615301 None:intergenic 40.0%
ATCGATGAAATGAGAGCCAG+CGG + chr7.2:23615363-23615382 None:intergenic 45.0%
CTAACATAAGCTCGCTGTGT+AGG + chr7.2:23616597-23616616 None:intergenic 45.0%
CTTGAGCATCTACGAGTTGT+GGG - chr7.2:23615770-23615789 MS.gene54959:CDS 45.0%
GCGTATGGTGGTCAATACAA+TGG + chr7.2:23616142-23616161 None:intergenic 45.0%
TAAAAGTCGGCATGTTGCAG+AGG + chr7.2:23616722-23616741 None:intergenic 45.0%
TATTGACCACCATACGCTGA+AGG - chr7.2:23616145-23616164 MS.gene54959:intron 45.0%
TCTTGAGCATCTACGAGTTG+TGG - chr7.2:23615769-23615788 MS.gene54959:CDS 45.0%
TTGTCTCGCTGCACTAATGA+AGG - chr7.2:23616860-23616879 MS.gene54959:CDS 45.0%
! AGGTATGATGACAGGCATTG+AGG + chr7.2:23616544-23616563 None:intergenic 45.0%
! CAAAGAGATGGACTCATCTC+TGG - chr7.2:23615231-23615250 MS.gene54959:intron 45.0%
ACACTTGTAAGCCTCGACCT+CGG - chr7.2:23615596-23615615 MS.gene54959:intron 50.0%
ACCACCATACGCTGAAGGAA+TGG - chr7.2:23616150-23616169 MS.gene54959:intron 50.0%
ACCGACGGTATCAACTTCTC+CGG - chr7.2:23615260-23615279 MS.gene54959:intron 50.0%
AGACTTGATTGCACAGCCAC+AGG - chr7.2:23617023-23617042 MS.gene54959:CDS 50.0%
CAAGGCTATTCACACTGACG+TGG + chr7.2:23615502-23615521 None:intergenic 50.0%
CATACGCTGAAGGAATGGGA+TGG - chr7.2:23616155-23616174 MS.gene54959:intron 50.0%
CATCCCATTCCTTCAGCGTA+TGG + chr7.2:23616157-23616176 None:intergenic 50.0%
CCACCATACGCTGAAGGAAT+GGG - chr7.2:23616151-23616170 MS.gene54959:intron 50.0%
GACTTGATTGCACAGCCACA+GGG - chr7.2:23617024-23617043 MS.gene54959:CDS 50.0%
GCATACATGTGCCCGTACAA+TGG + chr7.2:23616996-23617015 None:intergenic 50.0%
GCGGATCTACTTCCTCATCA+TGG + chr7.2:23615805-23615824 None:intergenic 50.0%
GCTTTACGATGATTGGGAGG+TGG - chr7.2:23616338-23616357 MS.gene54959:CDS 50.0%
GGAGCTTTACGATGATTGGG+AGG - chr7.2:23616335-23616354 MS.gene54959:CDS 50.0%
GGCATACCCAAATTGCCTGT+TGG - chr7.2:23615557-23615576 MS.gene54959:intron 50.0%
GTTGAAGCTTAGGGCAGTGT+TGG + chr7.2:23616377-23616396 None:intergenic 50.0%
TGGCAACTGCCTCTTTGGTA+GGG + chr7.2:23615199-23615218 None:intergenic 50.0%
!! AGGCATTGAGGAACAAGCTC+TGG + chr7.2:23616532-23616551 None:intergenic 50.0%
ATCTTATCCACCGCTGGTGG+TGG + chr7.2:23615131-23615150 None:intergenic 55.0%
CCCATTCCTTCAGCGTATGG+TGG + chr7.2:23616154-23616173 None:intergenic 55.0%
CTGATCTTATCCACCGCTGG+TGG + chr7.2:23615134-23615153 None:intergenic 55.0%
CTGCTGATCTTATCCACCGC+TGG + chr7.2:23615137-23615156 None:intergenic 55.0%
GCTTCACAAGGAACCAACCG+AGG + chr7.2:23615616-23615635 None:intergenic 55.0%
GCTTGTGGCAACTGCCTCTT+TGG + chr7.2:23615204-23615223 None:intergenic 55.0%
GGCATGTTGCAGAGGCCTTT+GGG + chr7.2:23616714-23616733 None:intergenic 55.0%
GTCTCGTCTCCCTACCAAAG+AGG - chr7.2:23615187-23615206 MS.gene54959:intron 55.0%
GTGGCAACTGCCTCTTTGGT+AGG + chr7.2:23615200-23615219 None:intergenic 55.0%
TTACCGGACGCGATTCTGAG+CGG - chr7.2:23615158-23615177 MS.gene54959:intron 55.0%
TTGTAAGCCTCGACCTCGGT+TGG - chr7.2:23615600-23615619 MS.gene54959:intron 55.0%
!! GCCGGAGAAGTTGATACCGT+CGG + chr7.2:23615264-23615283 None:intergenic 55.0%
ATCCCGCTCAGAATCGCGTC+CGG + chr7.2:23615164-23615183 None:intergenic 60.0%
ATTGCACAGCCACAGGGCAG+AGG - chr7.2:23617030-23617049 MS.gene54959:CDS 60.0%
CAAGGAACCAACCGAGGTCG+AGG + chr7.2:23615610-23615629 None:intergenic 60.0%
CGGCATGTTGCAGAGGCCTT+TGG + chr7.2:23616715-23616734 None:intergenic 60.0%
TACCGGACGCGATTCTGAGC+GGG - chr7.2:23615159-23615178 MS.gene54959:intron 60.0%
TCATACACGCCTCTGCCCTG+TGG + chr7.2:23617042-23617061 None:intergenic 60.0%
TGCAGAGGCCTTTGGGCAAG+TGG + chr7.2:23616707-23616726 None:intergenic 60.0%
! GGGCAGTGTTGGAGCACTTG+CGG + chr7.2:23616366-23616385 None:intergenic 60.0%
!! AGAAGCACCACCACCACCAG+CGG - chr7.2:23615118-23615137 MS.gene54959:CDS 60.0%
!! TTATCCACCGCTGGTGGTGG+TGG + chr7.2:23615128-23615147 None:intergenic 60.0%
AGCACCACCACCACCAGCGG+TGG - chr7.2:23615121-23615140 MS.gene54959:CDS 70.0%
TTGGTCTCTCGCGACGCCGC+TGG - chr7.2:23615344-23615363 MS.gene54959:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 23615092 23617061 23615092 ID=MS.gene54959
chr7.2 mRNA 23615092 23617061 23615092 ID=MS.gene54959.t1;Parent=MS.gene54959
chr7.2 exon 23616165 23617061 23616165 ID=MS.gene54959.t1.exon1;Parent=MS.gene54959.t1
chr7.2 CDS 23616165 23617061 23616165 ID=cds.MS.gene54959.t1;Parent=MS.gene54959.t1
chr7.2 exon 23615740 23615877 23615740 ID=MS.gene54959.t1.exon2;Parent=MS.gene54959.t1
chr7.2 CDS 23615740 23615877 23615740 ID=cds.MS.gene54959.t1;Parent=MS.gene54959.t1
chr7.2 exon 23615092 23615172 23615092 ID=MS.gene54959.t1.exon3;Parent=MS.gene54959.t1
chr7.2 CDS 23615092 23615172 23615092 ID=cds.MS.gene54959.t1;Parent=MS.gene54959.t1
Gene Sequence

>MS.gene54959

ATGGGGCGACGGAGGAAGAGAATTTCAGAAGCACCACCACCACCAGCGGTGGATAAGATCAGCAGTTTACCGGACGCGATTCTGAGCGGGATTCTGTCTCGTCTCCCTACCAAAGAGGCAGTTGCCACAAGCATTCTGTCAAAGAGATGGACTCATCTCTGGAAATTTACCGACGGTATCAACTTCTCCGGCATCATCACAGTGAATAACATTGAATCTAATTACAGTTTAAATGAGTCTATATACTCAATTTTGGTCTCTCGCGACGCCGCTGGCTCTCATTTCATCGATAGTTTTAGTCTCGAAATTGAATATGGTAGTTATGATCTAGCCTTACGTTTTGGCATTCACAACGTCAACAAATGGATTAACTTCATTGTTCAACGCAAACTCAAGCATCTTCGTCTCCACGTCAGTGTGAATAGCCTTGATGATGATGATGATGATGATGATGATGATGAATATGGCATACCCAAATTGCCTGTTGGTATTCTCACATGTACAACACTTGTAAGCCTCGACCTCGGTTGGTTCCTTGTGAAGCCTTTCGATTCTTCTTCTATTAGATTTGGATTTGGATTTGGATTTGGATTTCCATCACTCAATGTCCTTCATTTGGACAATGTGATCTTTGATGAACTTCAAGATTTTTTGTTGCTTTTAGCTGGATGTCCAAATCTTGAGCATCTACGAGTTGTGGGTATATACTTCCATGATGAGGAAGTAGATCCGCTATTCATTCAAGAGTTTAAAAGCTTTAGCTTACCCAAATTGATTAGTGCACATATCACTCATTGTTGTTTGTCTTCATATTTTCCGTTGAAAGCACTATCTAATTTGAAGTCTCTGAGGATAGATACATTCATGTTTCGCACAAAAGATCACAAATTCTTCCAGGTTCGTTTTATTTATTTATTTATTGAGTATTATGCATTGCTACCTCAATCTATATAATACTGTCTGTGTCCAATATAACACAATTGATTACATTCAAAAATTTGATTACATTCAATAATTCCGTTTTCTCCAATTTGATTATATGTCAGTCCATTGTATTGACCACCATACGCTGAAGGAATGGGATGGAAAACAAAGCAAAAATGTGATTCATCTGCCATGTTTTTTCTTTTTTCTTTTTGTGAATTTTGCCCCAATTTGATAGTGTGTCTTTCGACATAATTCAGGCGAATCAGCTGCAACGCCGTTACGATGATATTCCTATCTTTCATAATTTGTCCCGATTGGAGCTTTACGATGATTGGGAGGTGGTACCGCAAGTGCTCCAACACTGCCCTAAGCTTCAACATCTCGAACTTTACAAGGTTTGTTAAGTCTAAGAAGTAAGAACCATATTCGGTTTATCTTTTCTTAACACACCTTAACTTTAGTTATGTGCAATATTAATAGGAAAAAGATGATGAAGAAAATTGGGTGGAACCAGAGCTTGTTCCTCAATGCCTGTCATCATACCTTAGAACTTGCACTATTCATGACTTTTCAGGCCTACACAGCGAGCTTATGTTAGCAAAATATATTTTGATGAAGGCAAGAATTTTACAAATCATGGAAATCTGGAACAAATGGGATGAACCTAAAATCAAAAGAAAATTGTCCACTTGCCCAAAGGCCTCTGCAACATGCCGACTTTTATTTTATTGATAACATATAGACTGTGTAAATAGTAGTTTCTCTATCCTGCTTGCTGTTTTATTAGCTTCTATTTGGTTGTTTGAACTTTGAACTATGAGTTATTATGAATGTCATGACTTTGTCTCGCTGCACTAATGAAGGAAAAATGATCTTTAAATGATTTATTAGTACTCATCTACCCTAACTTTTTATTTATATACATTTATGTATTTATTGAACCTGTTTATGACTTCAATTAGATCAAGGTTCATCCATTGTACGGGCACATGTATGCAAAATTCAGACTTGATTGCACAGCCACAGGGCAGAGGCGTGTATGA

Protein sequence

>MS.gene54959.t1

MGRRRKRISEAPPPPAVDKISSLPDAILSGILSRLPTKEAVATSILSKRWTHLWKFTDGINFSGIITVNNIESNYSLNESIYSILVSRDAAGSHFIDSFSLEIEYGSYDLALRFGIHNVNKWINFIVQRKLKHLRLHVSVNSLDDDDDDDDDDEYGIPKLPVGILTCTTLVSLDLGWFLVKPFDSSSIRFGFGFGFGFPSLNVLHLDNVIFDELQDFLLLLAGCPNLEHLRVVGIYFHDEEVDPLFIQEFKSFSLPKLISAHITHCCLSSYFPLKALSNLKSLRIDTFMFRTKDHKFFQANQLQRRYDDIPIFHNLSRLELYDDWEVVPQVLQHCPKLQHLELYKIKVHPLYGHMYAKFRLDCTATGQRRV