AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072003


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072003.t1 MTR_2g007450 55.254 295 99 4 36 298 13 306 2.06e-98 296
MS.gene072003.t1 MTR_2g007500 49.310 290 103 4 26 295 1 266 3.92e-81 249
MS.gene072003.t1 MTR_4g098590 51.838 272 111 5 41 297 1 267 3.56e-78 243
MS.gene072003.t1 MTR_3g026920 45.485 299 102 6 39 297 19 296 1.60e-72 230
MS.gene072003.t1 MTR_1g053025 49.117 283 113 8 38 297 1 275 1.00e-70 224
MS.gene072003.t1 MTR_1g107385 43.131 313 143 7 36 320 29 334 9.23e-63 205
MS.gene072003.t1 MTR_5g083890 48.536 239 117 3 39 271 6 244 4.44e-62 206
MS.gene072003.t1 MTR_3g107160 42.908 282 137 8 41 310 12 281 2.91e-61 200
MS.gene072003.t1 MTR_3g107100 44.203 276 121 7 39 298 11 269 5.59e-59 195
MS.gene072003.t1 MTR_7g083740 42.754 276 101 7 37 297 15 248 3.78e-55 184
MS.gene072003.t1 MTR_2g007400 47.368 247 119 7 38 279 11 251 6.08e-54 181
MS.gene072003.t1 MTR_3g107120 42.525 301 123 11 41 319 11 283 2.40e-51 174
MS.gene072003.t1 MTR_2g007530 43.145 248 90 7 36 234 16 261 2.24e-49 168
MS.gene072003.t1 MTR_7g075820 44.813 241 116 6 37 266 4 238 6.17e-47 163
MS.gene072003.t1 MTR_3g099830 41.221 262 110 8 36 284 9 239 7.03e-45 157
MS.gene072003.t1 MTR_2g005990 42.387 243 126 6 37 273 4 238 1.98e-44 156
MS.gene072003.t1 MTR_2g008310 44.118 238 116 4 38 273 1 223 3.25e-44 155
MS.gene072003.t1 MTR_2g008320 41.803 244 121 5 36 273 49 277 4.52e-41 149
MS.gene072003.t1 MTR_3g107140 48.387 186 70 6 70 244 23 193 6.30e-41 142
MS.gene072003.t1 MTR_2g007360 37.970 266 108 7 36 284 9 234 4.98e-37 136
MS.gene072003.t1 MTR_2g007550 35.273 275 125 7 26 297 1 225 1.16e-33 127
MS.gene072003.t1 MTR_8g085430 37.083 240 130 7 33 266 5 229 1.49e-32 123
MS.gene072003.t1 MTR_7g115270 35.294 238 133 6 39 267 12 237 5.80e-30 117
MS.gene072003.t1 MTR_3g040700 36.638 232 131 7 36 266 40 256 2.96e-29 116
MS.gene072003.t1 MTR_1g085120 36.325 234 130 6 39 268 92 310 9.25e-29 115
MS.gene072003.t1 MTR_2g007460 47.934 121 43 2 36 156 9 109 9.45e-29 107
MS.gene072003.t1 MTR_7g032380 38.498 213 113 8 36 246 8 204 1.05e-28 113
MS.gene072003.t1 MTR_7g007340 37.021 235 105 6 38 271 12 204 1.11e-28 114
MS.gene072003.t1 MTR_5g082930 51.220 123 34 2 41 161 17 115 1.32e-28 110
MS.gene072003.t1 MTR_1g085120 36.325 234 130 6 39 268 179 397 1.36e-28 115
MS.gene072003.t1 MTR_1g085120 36.325 234 130 6 39 268 167 385 1.77e-28 115
MS.gene072003.t1 MTR_6g011460 36.087 230 131 5 38 267 45 258 3.51e-28 113
MS.gene072003.t1 MTR_3g036250 36.522 230 130 7 39 267 5 219 4.43e-27 109
MS.gene072003.t1 MTR_7g098510 35.685 241 133 8 32 270 11 231 4.11e-26 107
MS.gene072003.t1 MTR_7g034090 42.373 177 71 7 41 205 6 163 5.20e-26 107
MS.gene072003.t1 MTR_5g073420 33.948 271 150 9 36 301 8 254 2.00e-25 105
MS.gene072003.t1 MTR_7g056433 37.662 231 126 9 39 267 12 226 2.57e-25 105
MS.gene072003.t1 MTR_3g467400 32.867 286 151 11 39 311 3 260 2.57e-25 104
MS.gene072003.t1 MTR_1g041245 35.443 237 130 9 37 271 9 224 2.10e-24 102
MS.gene072003.t1 MTR_5g058100 36.626 243 134 8 36 277 6 229 3.38e-24 101
MS.gene072003.t1 MTR_7g098480 37.302 252 128 11 32 279 11 236 3.61e-24 102
MS.gene072003.t1 MTR_7g098570 37.555 229 125 8 38 266 19 229 4.31e-24 102
MS.gene072003.t1 MTR_6g022500 33.740 246 140 7 38 279 100 326 7.32e-24 101
MS.gene072003.t1 MTR_7g056447 37.500 200 107 6 33 231 3 185 2.22e-23 98.2
MS.gene072003.t1 MTR_5g045510 34.848 198 114 6 37 234 10 192 3.88e-23 98.6
MS.gene072003.t1 MTR_3g095600 36.325 234 110 9 37 268 2 198 5.68e-23 97.1
MS.gene072003.t1 MTR_3g108150 31.317 281 153 9 39 303 13 269 6.35e-23 98.2
MS.gene072003.t1 MTR_7g056280 38.122 181 102 5 41 221 8 178 7.88e-23 99.4
MS.gene072003.t1 MTR_5g058000 35.498 231 129 6 38 266 7 219 8.56e-23 97.8
MS.gene072003.t1 MTR_7g055943 34.043 235 136 4 35 266 36 254 1.11e-22 98.2
MS.gene072003.t1 MTR_4g039440 33.600 250 137 8 38 280 33 260 9.50e-22 95.1
MS.gene072003.t1 MTR_7g007370 31.513 238 104 4 34 271 12 190 1.33e-21 94.0
MS.gene072003.t1 MTR_0492s0020 34.156 243 134 7 39 281 86 302 1.67e-21 94.7
MS.gene072003.t1 MTR_0543s0010 34.156 243 134 7 39 281 86 302 1.99e-21 94.7
MS.gene072003.t1 MTR_7g114710 38.500 200 107 7 37 235 11 195 2.48e-21 93.6
MS.gene072003.t1 MTR_7g056430 35.593 236 103 9 36 267 6 196 6.99e-21 94.0
MS.gene072003.t1 MTR_7g056420 35.593 236 103 9 36 267 6 196 7.58e-21 94.0
MS.gene072003.t1 MTR_7g032370 34.715 193 109 6 51 242 2 178 8.53e-21 91.7
MS.gene072003.t1 MTR_5g045170 37.004 227 123 8 41 266 16 223 1.46e-20 91.7
MS.gene072003.t1 MTR_5g061680 35.426 223 127 7 37 257 9 216 1.65e-20 90.5
MS.gene072003.t1 MTR_1089s0010 34.800 250 132 7 38 280 7 232 3.18e-20 90.5
MS.gene072003.t1 MTR_3g108560 34.199 231 126 7 39 268 20 225 3.53e-20 89.7
MS.gene072003.t1 MTR_4g134150 32.857 210 117 7 33 241 8 194 4.61e-20 87.4
MS.gene072003.t1 MTR_3g110010 38.308 201 100 7 39 236 13 192 4.94e-20 91.3
MS.gene072003.t1 MTR_6g044560 33.077 260 131 7 36 266 175 420 5.64e-20 90.9
MS.gene072003.t1 MTR_3g109982 38.308 201 100 7 39 236 13 192 5.78e-20 90.9
MS.gene072003.t1 MTR_7g007080 30.736 231 146 5 39 267 4 222 5.89e-20 89.7
MS.gene072003.t1 MTR_3g108560 34.199 231 126 7 39 268 20 225 6.08e-20 89.7
MS.gene072003.t1 MTR_7g026500 31.799 239 136 7 36 267 11 229 8.01e-20 89.7
MS.gene072003.t1 MTR_3g023630 36.500 200 109 8 41 238 10 193 1.30e-19 88.6
MS.gene072003.t1 MTR_6g044572 33.591 259 127 9 38 266 1 244 1.65e-19 88.6
MS.gene072003.t1 MTR_6g022360 33.478 230 125 6 38 266 42 244 3.96e-19 87.8
MS.gene072003.t1 MTR_7g088260 33.761 234 122 9 39 267 91 296 8.77e-19 87.0
MS.gene072003.t1 MTR_8g468810 34.722 216 101 9 39 236 25 218 1.43e-18 85.1
MS.gene072003.t1 MTR_8g468810 34.722 216 101 9 39 236 25 218 1.63e-18 85.1
MS.gene072003.t1 MTR_3g105060 32.536 209 126 5 36 244 11 204 2.05e-18 85.1
MS.gene072003.t1 MTR_7g075800 31.660 259 140 12 39 272 9 255 2.31e-18 86.3
MS.gene072003.t1 MTR_8g468810 34.722 216 101 9 39 236 25 218 2.89e-18 84.7
MS.gene072003.t1 MTR_8g468810 34.722 216 101 9 39 236 25 218 3.34e-18 84.7
MS.gene072003.t1 MTR_3g450920 41.447 152 74 4 80 231 54 190 5.09e-18 82.0
MS.gene072003.t1 MTR_8g468810 34.722 216 101 9 39 236 25 218 6.05e-18 84.3
MS.gene072003.t1 MTR_2g007100 55.263 76 28 2 38 107 1 76 9.59e-18 77.0
MS.gene072003.t1 MTR_8g445780 33.333 246 133 12 33 270 7 229 1.40e-17 83.2
MS.gene072003.t1 MTR_3g082890 34.450 209 116 5 39 244 17 207 1.63e-17 83.2
MS.gene072003.t1 MTR_3g082890 34.450 209 116 5 39 244 97 287 1.65e-17 83.2
MS.gene072003.t1 MTR_5g008920 31.600 250 146 8 37 282 10 238 2.10e-17 82.4
MS.gene072003.t1 MTR_1g492880 45.545 101 51 3 41 141 8 104 3.75e-17 76.3
MS.gene072003.t1 MTR_7g056287 33.191 235 129 10 39 267 3 215 3.80e-17 81.6
MS.gene072003.t1 MTR_3g087260 32.917 240 123 8 32 267 5 210 4.69e-17 82.0
MS.gene072003.t1 MTR_7g034110 30.638 235 139 8 37 266 9 224 8.39e-17 80.5
MS.gene072003.t1 MTR_8g058965 33.953 215 115 8 38 235 12 216 9.21e-17 80.9
MS.gene072003.t1 MTR_7g056277 33.191 235 129 10 39 267 259 471 9.46e-17 81.3
MS.gene072003.t1 MTR_7g033915 31.466 232 123 10 37 267 9 205 9.76e-17 80.5
MS.gene072003.t1 MTR_4g032730 33.333 219 115 7 37 240 13 215 1.17e-16 80.9
MS.gene072003.t1 MTR_5g073370 30.088 226 145 4 41 266 7 219 1.23e-16 80.1
MS.gene072003.t1 MTR_8g014160 31.304 230 136 10 39 258 41 258 3.78e-16 79.0
MS.gene072003.t1 MTR_1g492880 49.451 91 43 2 41 131 8 95 3.88e-16 73.2
MS.gene072003.t1 MTR_7g034115 34.434 212 118 7 38 244 10 205 4.83e-16 78.6
MS.gene072003.t1 MTR_5g084070 32.710 214 122 6 28 240 2 194 5.15e-16 78.6
MS.gene072003.t1 MTR_1g013560 30.476 210 135 5 36 243 16 216 1.23e-15 77.0
MS.gene072003.t1 MTR_8g014260 33.790 219 121 10 39 247 16 220 1.26e-15 77.4
MS.gene072003.t1 MTR_1g013560 30.476 210 135 5 36 243 16 216 1.36e-15 77.4
MS.gene072003.t1 MTR_7g033990 28.571 280 158 12 36 297 8 263 1.42e-15 77.4
MS.gene072003.t1 MTR_2g036470 33.498 203 112 6 37 233 12 197 1.48e-15 77.0
MS.gene072003.t1 MTR_7g033470 42.391 92 51 2 36 126 11 101 2.66e-15 72.4
MS.gene072003.t1 MTR_1g066830 31.169 231 144 6 36 266 5 220 3.89e-15 75.9
MS.gene072003.t1 MTR_7g060470 28.627 255 146 8 39 274 3 240 5.08e-15 75.5
MS.gene072003.t1 MTR_8g058970 31.944 216 122 8 38 234 18 227 7.13e-15 75.5
MS.gene072003.t1 MTR_4g056030 33.981 206 106 8 39 234 9 194 1.31e-14 74.7
MS.gene072003.t1 MTR_2g008300 53.030 66 31 0 179 244 4 69 2.28e-14 67.4
MS.gene072003.t1 MTR_1g014450 32.178 202 117 7 39 233 16 204 3.38e-14 73.2
MS.gene072003.t1 MTR_6g040270 31.624 234 139 7 38 268 7 222 3.93e-14 72.8
MS.gene072003.t1 MTR_8g062270 30.769 247 140 10 37 270 14 242 5.65e-14 72.8
MS.gene072003.t1 MTR_1g013580 29.644 253 149 9 24 270 4 233 5.77e-14 72.4
MS.gene072003.t1 MTR_1g108820 30.864 243 136 6 36 268 5 225 5.92e-14 72.0
MS.gene072003.t1 MTR_1g108820 30.638 235 136 5 36 270 5 212 7.41e-14 72.0
MS.gene072003.t1 MTR_5g007410 30.568 229 139 7 41 266 28 239 9.05e-14 72.0
MS.gene072003.t1 MTR_7g081290 53.623 69 32 0 39 107 18 86 1.01e-13 70.5
MS.gene072003.t1 MTR_2g047858 28.879 232 137 7 39 257 115 331 1.10e-13 72.0
MS.gene072003.t1 MTR_6g045333 28.755 233 149 7 36 266 58 275 1.37e-13 71.6
MS.gene072003.t1 MTR_8g062010 31.429 210 116 10 31 231 1 191 2.13e-13 70.9
MS.gene072003.t1 MTR_4g080610 26.800 250 134 7 32 281 5 205 2.71e-13 70.1
MS.gene072003.t1 MTR_3g036320 30.769 182 107 5 41 219 22 187 3.75e-13 69.7
MS.gene072003.t1 MTR_8g467800 32.143 224 134 7 39 258 20 229 4.33e-13 69.3
MS.gene072003.t1 MTR_8g468760 29.796 245 145 10 35 268 5 233 5.26e-13 69.7
MS.gene072003.t1 MTR_1g095750 62.745 51 19 0 33 83 40 90 5.27e-13 65.9
MS.gene072003.t1 MTR_5g087940 33.158 190 93 9 32 214 17 179 5.38e-13 69.3
MS.gene072003.t1 MTR_1g011410 26.718 262 166 8 11 270 286 523 6.00e-13 69.7
MS.gene072003.t1 MTR_1g090900 32.967 182 105 6 39 219 11 176 7.10e-13 67.0
MS.gene072003.t1 MTR_5g080710 31.776 214 120 6 33 240 27 220 7.32e-13 69.3
MS.gene072003.t1 MTR_8g062080 31.081 222 137 9 17 234 1 210 8.80e-13 68.9
MS.gene072003.t1 MTR_5g021550 33.333 168 100 6 21 182 1 162 8.97e-13 65.9
MS.gene072003.t1 MTR_5g031970 29.437 231 121 8 35 257 9 205 9.48e-13 68.6
MS.gene072003.t1 MTR_8g467800 32.589 224 133 8 39 258 20 229 1.01e-12 68.9
MS.gene072003.t1 MTR_2g020170 40.952 105 54 3 34 134 17 117 1.50e-12 64.7
MS.gene072003.t1 MTR_4g056020 31.707 205 110 7 39 233 9 193 1.64e-12 68.2
MS.gene072003.t1 MTR_3g114200 50.704 71 33 1 39 109 19 87 1.86e-12 64.7
MS.gene072003.t1 MTR_0009s0080 32.328 232 141 8 35 265 13 229 1.87e-12 67.8
MS.gene072003.t1 MTR_7g033945 42.857 77 39 2 36 111 8 80 2.81e-12 64.7
MS.gene072003.t1 MTR_8g017280 29.730 185 113 8 39 220 36 206 2.94e-12 66.6
MS.gene072003.t1 MTR_3g113782 61.702 47 18 0 39 85 17 63 3.13e-12 62.0
MS.gene072003.t1 MTR_2g100570 29.134 254 143 12 27 269 61 288 3.71e-12 67.4
MS.gene072003.t1 MTR_2g100570 29.134 254 143 12 27 269 61 288 4.00e-12 67.4
MS.gene072003.t1 MTR_2g100570 29.134 254 143 12 27 269 61 288 4.11e-12 67.0
MS.gene072003.t1 MTR_7g098590 47.436 78 38 1 32 109 11 85 4.98e-12 62.8
MS.gene072003.t1 MTR_8g017280 29.255 188 116 8 36 220 33 206 5.58e-12 66.6
MS.gene072003.t1 MTR_3g014550 32.727 165 86 5 39 203 11 150 5.77e-12 66.2
MS.gene072003.t1 MTR_1g016340 28.829 222 130 8 34 243 10 215 5.81e-12 66.6
MS.gene072003.t1 MTR_3g006580 31.905 210 114 9 19 219 10 199 5.87e-12 66.2
MS.gene072003.t1 MTR_6g022390 35.659 129 71 5 38 159 4 127 6.25e-12 63.2
MS.gene072003.t1 MTR_1g016340 28.829 222 130 8 34 243 15 220 6.37e-12 66.2
MS.gene072003.t1 MTR_8g077460 31.915 235 143 10 39 265 10 235 7.63e-12 65.9
MS.gene072003.t1 MTR_1g038710 29.756 205 126 5 35 233 15 207 9.56e-12 65.9
MS.gene072003.t1 MTR_2g047872 25.000 220 154 5 24 243 8 216 1.41e-11 65.5
MS.gene072003.t1 MTR_8g468910 29.694 229 136 10 39 258 48 260 1.46e-11 65.1
MS.gene072003.t1 MTR_3g014590 32.727 165 86 5 39 203 11 150 1.81e-11 64.7
MS.gene072003.t1 MTR_4g026550 28.980 245 145 7 39 269 147 376 2.07e-11 65.1
MS.gene072003.t1 MTR_4g057725 28.837 215 132 6 36 243 19 219 2.22e-11 64.7
MS.gene072003.t1 MTR_8g469020 28.372 215 131 5 36 234 4 211 2.27e-11 64.7
MS.gene072003.t1 MTR_4g093690 31.220 205 108 9 39 232 18 200 2.61e-11 63.5
MS.gene072003.t1 MTR_1g011430 29.231 195 123 6 39 233 7 186 2.89e-11 64.3
MS.gene072003.t1 MTR_8g468840 30.180 222 127 8 39 249 14 218 2.93e-11 64.3
MS.gene072003.t1 MTR_7g033940 48.571 70 31 2 41 109 96 161 3.77e-11 62.4
MS.gene072003.t1 MTR_2g091145 24.000 275 174 9 34 281 16 282 3.93e-11 63.9
MS.gene072003.t1 MTR_3g023470 29.648 199 106 7 39 222 15 194 4.37e-11 63.5
MS.gene072003.t1 MTR_1g077420 27.778 180 108 6 39 214 4 165 5.06e-11 62.8
MS.gene072003.t1 MTR_3g023330 33.155 187 86 8 39 214 15 173 5.25e-11 63.2
MS.gene072003.t1 MTR_3g023270 28.689 244 141 9 39 269 12 235 5.57e-11 63.2
MS.gene072003.t1 MTR_2g007090 51.613 62 30 0 36 97 7 68 5.64e-11 62.8
MS.gene072003.t1 MTR_0227s0010 28.713 202 122 7 38 233 14 199 5.80e-11 63.2
MS.gene072003.t1 MTR_4g014260 31.333 150 87 4 39 188 26 159 8.06e-11 62.8
MS.gene072003.t1 MTR_8g070950 31.933 238 131 13 39 267 15 230 8.40e-11 63.2
MS.gene072003.t1 MTR_4g014260 31.333 150 87 4 39 188 26 159 9.06e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072003.t1 AT1G16930 32.308 195 116 4 39 233 15 193 1.03e-25 107
MS.gene072003.t1 AT1G16930 32.308 195 116 4 39 233 15 193 1.03e-25 107
MS.gene072003.t1 AT1G16930 32.308 195 116 4 39 233 15 193 1.03e-25 107
MS.gene072003.t1 AT5G25850 34.000 200 106 4 38 234 19 195 1.04e-23 101
MS.gene072003.t1 AT4G14103 35.745 235 123 10 34 263 3 214 5.39e-23 98.6
MS.gene072003.t1 AT4G14103 35.745 235 123 10 34 263 3 214 5.39e-23 98.6
MS.gene072003.t1 AT4G14103 35.745 235 123 10 34 263 3 214 1.28e-22 98.2
MS.gene072003.t1 AT1G78750 33.803 213 126 8 27 234 4 206 2.87e-22 97.1
MS.gene072003.t1 AT1G78750 33.803 213 126 8 27 234 4 206 2.87e-22 97.1
MS.gene072003.t1 AT1G69630 35.577 208 110 8 32 233 9 198 6.42e-22 96.3
MS.gene072003.t1 AT5G53635 31.624 234 139 7 41 274 2 214 3.99e-21 93.6
MS.gene072003.t1 AT5G60610 35.468 203 98 7 38 233 1 177 4.93e-21 92.8
MS.gene072003.t1 AT5G60610 35.468 203 98 7 38 233 1 177 4.93e-21 92.8
MS.gene072003.t1 AT5G22730 35.859 198 112 6 36 233 25 207 7.17e-21 92.4
MS.gene072003.t1 AT5G22720 31.855 248 127 7 35 272 19 234 7.67e-21 93.2
MS.gene072003.t1 AT5G22730 35.859 198 112 6 36 233 25 207 7.89e-21 93.2
MS.gene072003.t1 AT5G22730 35.859 198 112 6 36 233 25 207 7.89e-21 93.2
MS.gene072003.t1 AT3G58860 30.797 276 158 8 38 302 6 259 3.10e-20 91.3
MS.gene072003.t1 AT2G26860 32.780 241 130 9 38 270 1 217 4.26e-20 90.5
MS.gene072003.t1 AT2G26860 32.780 241 130 9 38 270 1 217 4.26e-20 90.5
MS.gene072003.t1 AT4G14096 33.617 235 126 8 34 263 3 212 5.03e-20 90.9
MS.gene072003.t1 AT4G14096 33.617 235 126 8 34 263 3 212 5.03e-20 90.9
MS.gene072003.t1 AT3G42770 32.780 241 137 8 41 273 1 224 6.33e-20 90.5
MS.gene072003.t1 AT5G62970 34.545 220 107 10 38 233 1 207 6.95e-20 90.1
MS.gene072003.t1 AT1G55660 31.658 199 120 6 38 233 52 237 1.04e-19 89.0
MS.gene072003.t1 AT4G00160 35.096 208 120 6 27 233 4 197 1.18e-19 89.7
MS.gene072003.t1 AT1G55660 31.658 199 120 6 38 233 52 237 1.55e-19 89.4
MS.gene072003.t1 AT4G22280 31.439 264 142 10 38 290 1 236 2.35e-19 87.4
MS.gene072003.t1 AT3G59200 35.885 209 104 8 36 233 4 193 2.59e-19 87.8
MS.gene072003.t1 AT3G59200 36.058 208 103 8 37 233 5 193 4.09e-19 88.2
MS.gene072003.t1 AT4G26350 30.556 216 129 6 38 251 1 197 4.91e-19 87.4
MS.gene072003.t1 AT4G22280 32.645 242 130 9 38 274 1 214 5.29e-19 87.4
MS.gene072003.t1 AT5G53840 31.628 215 118 7 40 251 19 207 7.14e-19 87.0
MS.gene072003.t1 AT5G22670 35.122 205 107 9 36 236 8 190 1.65e-18 86.3
MS.gene072003.t1 AT4G00315 31.658 199 120 6 38 233 1 186 2.67e-18 85.5
MS.gene072003.t1 AT3G59190 32.773 238 133 8 36 266 9 226 2.84e-18 85.1
MS.gene072003.t1 AT3G59190 32.773 238 133 8 36 266 9 226 3.52e-18 85.5
MS.gene072003.t1 AT5G22660 32.663 199 108 5 39 233 13 189 4.88e-18 83.6
MS.gene072003.t1 AT1G51370 30.769 195 113 4 39 233 19 191 5.12e-18 84.0
MS.gene072003.t1 AT5G56410 34.314 204 123 6 38 233 1 201 6.02e-18 84.7
MS.gene072003.t1 AT5G22700 32.487 197 111 5 39 233 43 219 6.33e-18 84.3
MS.gene072003.t1 AT5G56380 36.453 203 107 8 38 233 1 188 6.49e-18 84.3
MS.gene072003.t1 AT5G56380 36.453 203 107 8 38 233 1 188 6.49e-18 84.3
MS.gene072003.t1 AT5G22700 32.487 197 111 5 39 233 6 182 8.38e-18 84.0
MS.gene072003.t1 AT5G22700 32.487 197 111 5 39 233 6 182 8.38e-18 84.0
MS.gene072003.t1 AT5G22700 32.487 197 111 5 39 233 6 182 8.38e-18 84.0
MS.gene072003.t1 AT5G22700 32.487 197 111 5 39 233 6 182 8.38e-18 84.0
MS.gene072003.t1 AT5G22700 32.487 197 111 5 39 233 43 219 8.92e-18 84.0
MS.gene072003.t1 AT1G51370 30.769 195 113 4 39 233 19 191 9.49e-18 83.6
MS.gene072003.t1 AT5G22610 32.727 220 123 7 17 233 5 202 9.83e-18 84.0
MS.gene072003.t1 AT1G51370 30.769 195 113 4 39 233 19 191 1.10e-17 83.6
MS.gene072003.t1 AT5G22610 32.727 220 123 7 17 233 5 202 1.13e-17 84.0
MS.gene072003.t1 AT5G22660 33.846 195 111 5 39 233 13 189 1.59e-17 83.2
MS.gene072003.t1 AT5G38590 29.778 225 134 7 38 258 1 205 4.95e-17 80.5
MS.gene072003.t1 AT5G56440 32.178 202 111 6 38 233 1 182 5.09e-17 81.6
MS.gene072003.t1 AT3G58980 32.367 207 121 8 38 240 1 192 5.77e-17 82.0
MS.gene072003.t1 AT5G41840 29.066 289 150 11 32 293 7 267 6.74e-17 81.6
MS.gene072003.t1 AT5G44950 31.683 202 121 5 39 239 4 189 7.50e-17 81.3
MS.gene072003.t1 AT4G26340 32.143 196 118 3 38 233 1 181 7.85e-17 81.3
MS.gene072003.t1 AT5G38590 29.778 225 134 7 38 258 1 205 1.11e-16 80.5
MS.gene072003.t1 AT3G49150 30.660 212 130 7 26 233 3 201 1.35e-16 80.5
MS.gene072003.t1 AT3G59160 31.193 218 124 7 36 233 10 221 1.70e-16 80.1
MS.gene072003.t1 AT4G10400 33.333 231 120 9 38 258 1 207 1.75e-16 80.1
MS.gene072003.t1 AT4G10400 33.333 231 120 9 38 258 1 207 1.75e-16 80.1
MS.gene072003.t1 AT4G10400 33.333 231 120 9 38 258 1 207 1.75e-16 80.1
MS.gene072003.t1 AT5G53640 30.256 195 116 5 39 233 22 196 2.11e-16 77.4
MS.gene072003.t1 AT2G42720 32.669 251 139 9 38 282 1 227 2.72e-16 79.7
MS.gene072003.t1 AT3G03040 31.839 223 123 8 38 248 1 206 3.45e-16 79.3
MS.gene072003.t1 AT4G09920 32.365 241 129 9 38 268 1 217 3.48e-16 77.8
MS.gene072003.t1 AT4G09920 32.365 241 129 9 38 268 1 217 3.48e-16 77.8
MS.gene072003.t1 AT4G09920 32.365 241 129 9 38 268 1 217 3.48e-16 77.8
MS.gene072003.t1 AT5G18770 29.310 232 133 5 39 260 24 234 3.70e-16 79.0
MS.gene072003.t1 AT3G59170 30.870 230 121 7 36 238 4 222 4.62e-16 79.0
MS.gene072003.t1 AT5G38392 32.381 210 112 7 38 233 1 194 5.09e-16 76.3
MS.gene072003.t1 AT4G09920 32.365 241 129 9 38 268 1 217 5.86e-16 77.8
MS.gene072003.t1 AT4G09920 32.365 241 129 9 38 268 1 217 5.86e-16 77.8
MS.gene072003.t1 AT5G18770 29.310 232 133 5 39 260 24 234 8.66e-16 78.2
MS.gene072003.t1 AT1G78760 30.000 210 110 8 35 233 12 195 8.94e-16 78.2
MS.gene072003.t1 AT4G13985 28.922 204 135 4 38 239 18 213 1.11e-15 77.8
MS.gene072003.t1 AT5G38390 32.906 234 112 9 38 258 1 202 1.16e-15 77.8
MS.gene072003.t1 AT4G15060 30.180 222 129 9 35 249 22 224 1.22e-15 77.4
MS.gene072003.t1 AT3G62440 30.698 215 127 7 38 240 1 205 2.13e-15 77.0
MS.gene072003.t1 AT3G58880 30.855 269 138 9 41 281 5 253 2.32e-15 77.0
MS.gene072003.t1 AT1G06630 29.771 262 152 10 39 280 12 261 2.42e-15 75.9
MS.gene072003.t1 AT4G15060 30.594 219 126 9 38 249 171 370 2.68e-15 77.0
MS.gene072003.t1 AT3G58920 35.407 209 107 11 38 233 1 194 3.03e-15 76.6
MS.gene072003.t1 AT3G58930 30.677 251 141 8 38 275 1 231 3.05e-15 76.6
MS.gene072003.t1 AT3G58930 30.677 251 141 8 38 275 1 231 3.05e-15 76.6
MS.gene072003.t1 AT3G58930 30.677 251 141 8 38 275 1 231 3.05e-15 76.6
MS.gene072003.t1 AT2G26030 31.731 208 99 8 39 232 4 182 3.32e-15 76.3
MS.gene072003.t1 AT1G06630 29.771 262 152 10 39 280 12 261 3.64e-15 75.9
MS.gene072003.t1 AT1G06630 29.771 262 152 10 39 280 12 261 3.64e-15 75.9
MS.gene072003.t1 AT5G56370 35.323 201 100 10 38 231 1 178 3.75e-15 75.5
MS.gene072003.t1 AT5G56370 35.323 201 100 10 38 231 1 178 4.13e-15 75.9
MS.gene072003.t1 AT5G56370 35.323 201 100 10 38 231 1 178 4.13e-15 75.9
MS.gene072003.t1 AT1G06630 29.771 262 152 10 39 280 12 261 4.27e-15 75.9
MS.gene072003.t1 AT1G06630 29.771 262 152 10 39 280 12 261 4.27e-15 75.9
MS.gene072003.t1 AT1G06630 29.771 262 152 10 39 280 12 261 4.27e-15 75.9
MS.gene072003.t1 AT1G06630 29.771 262 152 10 39 280 12 261 4.27e-15 75.9
MS.gene072003.t1 AT2G26030 31.731 208 99 8 39 232 4 182 4.29e-15 75.9
MS.gene072003.t1 AT2G26030 31.731 208 99 8 39 232 4 182 4.29e-15 75.9
MS.gene072003.t1 AT1G06630 30.769 260 152 11 39 280 21 270 4.35e-15 75.9
MS.gene072003.t1 AT5G56690 30.126 239 139 9 38 269 1 218 5.13e-15 75.5
MS.gene072003.t1 AT1G58310 30.196 255 131 8 37 268 6 236 5.28e-15 75.9
MS.gene072003.t1 AT5G18780 31.308 214 119 6 39 249 11 199 5.80e-15 75.5
MS.gene072003.t1 AT5G18780 31.308 214 119 6 39 249 11 199 5.80e-15 75.5
MS.gene072003.t1 AT1G06630 29.434 265 155 10 36 280 9 261 7.40e-15 75.5
MS.gene072003.t1 AT5G25860 28.241 216 149 3 36 246 9 223 7.52e-15 75.5
MS.gene072003.t1 AT5G38396 33.333 201 122 5 38 233 1 194 7.64e-15 75.5
MS.gene072003.t1 AT5G18780 33.168 202 109 5 39 236 11 190 9.48e-15 75.1
MS.gene072003.t1 AT5G18780 33.168 202 109 5 39 236 11 190 9.48e-15 75.1
MS.gene072003.t1 AT1G60400 31.068 206 123 6 31 233 6 195 9.89e-15 74.7
MS.gene072003.t1 AT4G00320 32.258 217 110 10 36 233 10 208 1.26e-14 74.7
MS.gene072003.t1 AT1G60410 30.769 208 112 6 36 233 7 192 1.61e-14 74.3
MS.gene072003.t1 AT3G58900 32.057 209 122 6 38 240 1 195 2.04e-14 73.2
MS.gene072003.t1 AT3G58900 32.536 209 121 7 38 240 1 195 2.04e-14 73.2
MS.gene072003.t1 AT3G58900 32.536 209 121 7 38 240 1 195 2.04e-14 73.2
MS.gene072003.t1 AT3G59230 31.401 207 113 7 41 233 14 205 2.09e-14 73.9
MS.gene072003.t1 AT3G58960 31.156 199 121 6 38 234 1 185 2.44e-14 73.9
MS.gene072003.t1 AT3G58900 32.536 209 121 7 38 240 1 195 2.93e-14 73.6
MS.gene072003.t1 AT5G56820 31.472 197 111 6 39 233 15 189 2.96e-14 73.6
MS.gene072003.t1 AT3G44810 33.953 215 114 8 36 240 7 203 3.82e-14 73.2
MS.gene072003.t1 AT3G58940 29.730 259 141 9 38 282 1 232 5.30e-14 73.2
MS.gene072003.t1 AT3G58940 29.730 259 141 9 38 282 1 232 5.30e-14 73.2
MS.gene072003.t1 AT1G66310 31.633 196 111 6 41 233 21 196 5.70e-14 72.8
MS.gene072003.t1 AT5G44490 29.353 201 124 4 36 233 14 199 6.69e-14 72.4
MS.gene072003.t1 AT5G44490 29.353 201 124 4 36 233 14 199 7.16e-14 72.4
MS.gene072003.t1 AT3G52680 30.864 243 140 9 27 266 9 226 1.02e-13 71.6
MS.gene072003.t1 AT3G26922 28.807 243 145 7 39 277 14 232 1.14e-13 70.9
MS.gene072003.t1 AT3G26922 28.807 243 145 7 39 277 14 232 1.14e-13 70.9
MS.gene072003.t1 AT4G13965 32.353 204 120 7 39 242 10 195 1.22e-13 71.6
MS.gene072003.t1 AT5G41830 31.604 212 108 9 41 233 15 208 1.47e-13 71.6
MS.gene072003.t1 AT3G52680 31.556 225 125 8 27 246 9 209 1.68e-13 71.2
MS.gene072003.t1 AT1G66290 30.208 192 112 6 41 231 31 201 2.12e-13 70.9
MS.gene072003.t1 AT1G13780 28.689 244 128 10 36 259 7 224 2.31e-13 70.1
MS.gene072003.t1 AT3G59210 31.707 205 118 6 36 233 4 193 2.53e-13 70.9
MS.gene072003.t1 AT3G59210 31.707 205 118 6 36 233 4 193 2.53e-13 70.9
MS.gene072003.t1 AT3G59210 31.707 205 118 6 36 233 4 193 2.53e-13 70.9
MS.gene072003.t1 AT3G59210 31.707 205 118 6 36 233 4 193 2.53e-13 70.9
MS.gene072003.t1 AT3G59210 31.707 205 118 6 36 233 4 193 2.53e-13 70.9
MS.gene072003.t1 AT1G66300 28.934 197 115 7 41 233 31 206 2.56e-13 70.9
MS.gene072003.t1 AT1G19070 46.377 69 37 0 38 106 1 69 3.51e-13 64.7
MS.gene072003.t1 AT1G13780 28.689 244 128 10 36 259 7 224 4.09e-13 70.1
MS.gene072003.t1 AT1G78730 25.373 201 111 5 35 233 18 181 5.58e-13 69.7
MS.gene072003.t1 AT5G56420 27.240 279 167 6 39 296 6 269 9.73e-13 68.9
MS.gene072003.t1 AT5G56420 27.240 279 167 6 39 296 6 269 9.73e-13 68.9
MS.gene072003.t1 AT5G56420 27.240 279 167 6 39 296 6 269 9.73e-13 68.9
MS.gene072003.t1 AT3G49040 31.061 264 137 12 23 272 1 233 2.22e-12 67.0
MS.gene072003.t1 AT3G59000 63.265 49 18 0 38 86 1 49 3.85e-12 66.6
MS.gene072003.t1 AT1G78840 29.000 200 101 7 44 233 11 179 3.96e-12 67.0
MS.gene072003.t1 AT1G78840 29.000 200 101 7 44 233 11 179 3.96e-12 67.0
MS.gene072003.t1 AT5G03100 34.400 125 64 3 33 157 3 109 4.19e-12 66.2
MS.gene072003.t1 AT5G03100 34.400 125 64 3 33 157 3 109 4.19e-12 66.2
MS.gene072003.t1 AT3G59150 31.081 222 135 9 41 256 15 224 5.99e-12 66.6
MS.gene072003.t1 AT3G59000 63.265 49 18 0 38 86 1 49 7.17e-12 66.2
MS.gene072003.t1 AT2G04230 31.579 228 108 9 37 245 9 207 9.96e-12 65.9
MS.gene072003.t1 AT3G59240 30.288 208 117 8 41 238 10 199 1.01e-11 65.9
MS.gene072003.t1 AT3G44060 32.474 194 119 5 41 233 1 183 1.10e-11 65.9
MS.gene072003.t1 AT5G44940 29.237 236 138 11 41 270 7 219 1.24e-11 65.5
MS.gene072003.t1 AT5G56810 26.908 249 156 9 27 273 3 227 1.90e-11 64.3
MS.gene072003.t1 AT5G56810 26.908 249 156 9 27 273 3 227 1.94e-11 65.1
MS.gene072003.t1 AT3G56780 28.019 207 129 7 41 245 9 197 2.60e-11 64.7
MS.gene072003.t1 AT1G16940 29.126 206 116 7 39 239 11 191 2.97e-11 64.3
MS.gene072003.t1 AT3G56780 28.019 207 129 7 41 245 9 197 3.09e-11 64.3
MS.gene072003.t1 AT3G03030 33.108 148 92 3 38 184 1 142 3.15e-11 63.9
MS.gene072003.t1 AT3G56780 28.019 207 129 7 41 245 9 197 3.17e-11 64.3
MS.gene072003.t1 AT5G44960 32.512 203 107 8 41 234 7 188 3.37e-11 64.3
MS.gene072003.t1 AT1G66320 27.604 192 120 6 44 234 35 208 3.49e-11 64.3
MS.gene072003.t1 AT3G58820 60.417 48 19 0 38 85 1 48 3.73e-11 63.9
MS.gene072003.t1 AT3G03030 33.108 148 92 3 38 184 1 142 3.93e-11 64.3
MS.gene072003.t1 AT1G55030 30.500 200 116 6 36 233 16 194 4.18e-11 63.9
MS.gene072003.t1 AT1G80470 29.064 203 110 6 41 233 17 195 4.48e-11 63.9
MS.gene072003.t1 AT1G55030 30.500 200 116 6 36 233 6 184 4.65e-11 63.9
MS.gene072003.t1 AT1G52650 31.068 206 113 7 38 233 1 187 5.83e-11 63.5

Find 58 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATTTGCTCTAGTCAATT+TGG 0.158482 2.4:-75394049 None:intergenic
CTTCTTGGTGGGTTACTTAA+AGG 0.196525 2.4:+75395861 MS.gene072003:CDS
TTGAAAAGCCAATGAGTTCT+AGG 0.207411 2.4:-75393897 None:intergenic
AAGGAAACTGTTGATGAAAT+TGG 0.245067 2.4:-75393611 None:intergenic
CGAATCTGTGTACTCTGTTT+TGG 0.261004 2.4:+75393567 MS.gene072003:CDS
GCTTGTGGTAACTGCTTCTT+TGG 0.316002 2.4:-75393446 None:intergenic
TGAAACAGTTGAGTACTTCT+TGG 0.333595 2.4:+75395846 MS.gene072003:CDS
TGTTGTATCAATATTGATAT+TGG 0.335998 2.4:-75393524 None:intergenic
CGAAACAGTGGACTCATCTA+TGG 0.336064 2.4:+75393476 MS.gene072003:CDS
TCAACTGTTTCAATTTCAAT+TGG 0.343013 2.4:-75395835 None:intergenic
CCTTTCCTAACGTCGTCAAA+TGG 0.355195 2.4:+75393677 MS.gene072003:CDS
ATATTTGCTCTAGTCAATTT+GGG 0.369976 2.4:-75394048 None:intergenic
GTTTGCATGCATCGATGAAT+AGG 0.381802 2.4:+75393371 MS.gene072003:CDS
TGAGTTTGCGTTGAACAATA+AGG 0.385406 2.4:-75393705 None:intergenic
CGACCTCTTTCGATTCAATC+TGG 0.385928 2.4:+75393819 MS.gene072003:CDS
TTTGCACGTGAGAATACTTA+AGG 0.390382 2.4:-75393782 None:intergenic
TACTGTACTTAATGTCTAGA+AGG 0.404680 2.4:-75393630 None:intergenic
GCTTGTAGATCCTCAAGAAT+TGG 0.411699 2.4:-75393955 None:intergenic
TTGGCCTCTCGAGACGCTGC+TGG 0.418024 2.4:+75393586 MS.gene072003:CDS
ATCCTTTACCTAGAACTCAT+TGG 0.420817 2.4:+75393889 MS.gene072003:CDS
CAGGGGTTATTCATGGAAAT+CGG 0.421957 2.4:+75394448 MS.gene072003:intron
CTCTTTCGATTCAATCTGGA+GGG 0.425683 2.4:+75393823 MS.gene072003:CDS
GGCAATTTGCTAAAGAACTT+AGG 0.426488 2.4:-75393760 None:intergenic
CTCTCATACTATAACTAACT+TGG 0.432770 2.4:+75394248 MS.gene072003:CDS
CAACTGTTTCAATTTCAATT+GGG 0.446341 2.4:-75395834 None:intergenic
TTAACCCATTTGACGACGTT+AGG 0.449937 2.4:-75393682 None:intergenic
ACAATAACAGGGGTTATTCA+TGG 0.453808 2.4:+75394441 MS.gene072003:intron
CAACGCAAACTCAAGTATCT+TGG 0.461953 2.4:+75393715 MS.gene072003:CDS
GATATTGGTGAAGTGGAGGT+TGG 0.464006 2.4:-75393509 None:intergenic
CTTTCCTAACGTCGTCAAAT+GGG 0.469825 2.4:+75393678 MS.gene072003:CDS
TTGCACGTGAGAATACTTAA+GGG 0.502292 2.4:-75393781 None:intergenic
TAGGTTCGTCCACATCTAAA+CGG 0.507270 2.4:-75393741 None:intergenic
GAGATAAGTATGTCATCATA+AGG 0.507663 2.4:-75394228 None:intergenic
AGCCAATGAGTTCTAGGTAA+AGG 0.509197 2.4:-75393891 None:intergenic
TGTGGTAACTGCTTCTTTGG+TGG 0.511234 2.4:-75393443 None:intergenic
AGTACACAGATTCGTTAAAA+CGG 0.511604 2.4:-75393558 None:intergenic
GTTAGGAAAGGAAAGATCAT+TGG 0.512936 2.4:-75393665 None:intergenic
ATATTGGTGAAGTGGAGGTT+GGG 0.524933 2.4:-75393508 None:intergenic
ATGTGGCAAAGAATCTCGTC+TGG 0.527245 2.4:-75393406 None:intergenic
AACAGTTGAGTACTTCTTGG+TGG 0.532417 2.4:+75395849 MS.gene072003:CDS
TTGACTAGAGCAAATATCAC+TGG 0.535985 2.4:+75394054 MS.gene072003:CDS
CAATATTGATATTGGTGAAG+TGG 0.537871 2.4:-75393516 None:intergenic
ACAGTTGAGTACTTCTTGGT+GGG 0.543961 2.4:+75395850 MS.gene072003:CDS
TGCGAAATGTCCAATTCTTG+AGG 0.559990 2.4:+75393945 MS.gene072003:CDS
ATGGAAATCGGAAATGAAGA+AGG 0.561957 2.4:+75394460 MS.gene072003:CDS
CCTCCAGATTGAATCGAAAG+AGG 0.563379 2.4:-75393822 None:intergenic
TCTTTCGATTCAATCTGGAG+GGG 0.564475 2.4:+75393824 MS.gene072003:CDS
CCTCTTTCGATTCAATCTGG+AGG 0.565084 2.4:+75393822 MS.gene072003:CDS
GAAAGAGGTCGAGACTTACA+AGG 0.568222 2.4:-75393807 None:intergenic
TCTTGGTCTCCGTTTAGATG+TGG 0.569846 2.4:+75393732 MS.gene072003:CDS
CTGTTTCGACAAAACGCTTG+TGG 0.580787 2.4:-75393461 None:intergenic
CCATTTGACGACGTTAGGAA+AGG 0.583437 2.4:-75393677 None:intergenic
CAAGAATTGGACATTTCGCA+AGG 0.594255 2.4:-75393942 None:intergenic
TGGTCACAAACGACAGAATG+TGG 0.618048 2.4:-75393423 None:intergenic
GGAACCAGCAGCGTCTCGAG+AGG 0.643095 2.4:-75393590 None:intergenic
TATTGATATTGGTGAAGTGG+AGG 0.656096 2.4:-75393513 None:intergenic
AAAGAGGTCGAGACTTACAA+GGG 0.680201 2.4:-75393806 None:intergenic
TAAAGAGACACTATGCTGTG+CGG 0.748402 2.4:-75393299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTTGAAAATCACTAT+TGG + chr2.4:75395553-75395572 MS.gene072003:intron 15.0%
!!! ATATTTCATTTTTCTTTTCT+TGG + chr2.4:75394371-75394390 MS.gene072003:intron 15.0%
!!! ATTAAATAATGTTTTCTCAA+AGG + chr2.4:75395042-75395061 MS.gene072003:intron 15.0%
!!! TCAAAATCTTGAATTTTATA+AGG + chr2.4:75394329-75394348 MS.gene072003:intron 15.0%
!!! TTTATTTATTAAACCACTTT+TGG + chr2.4:75394925-75394944 MS.gene072003:intron 15.0%
!!! TTTTCTATCAATAATTTTCA+TGG - chr2.4:75395607-75395626 None:intergenic 15.0%
!! AAATTTGATACATAACCATA+AGG + chr2.4:75395002-75395021 MS.gene072003:intron 20.0%
!! AATATTCTACCTAACAATAT+TGG - chr2.4:75395240-75395259 None:intergenic 20.0%
!! AGTTTATATTGTATTTGTGT+TGG + chr2.4:75395715-75395734 MS.gene072003:intron 20.0%
!! ATCACTAGAAATATGAAAAA+AGG - chr2.4:75395177-75395196 None:intergenic 20.0%
!! TAACAATATTCTTGAAAGTA+AGG - chr2.4:75395426-75395445 None:intergenic 20.0%
!! TGTTGTATCAATATTGATAT+TGG - chr2.4:75393527-75393546 None:intergenic 20.0%
!! TTACTTTCAAGAATATTGTT+AGG + chr2.4:75395425-75395444 MS.gene072003:intron 20.0%
!! TTATGAAGTTTACTAAAGTA+AGG + chr2.4:75395318-75395337 MS.gene072003:intron 20.0%
!!! AGATCAAATTATCCATTTTT+TGG + chr2.4:75394957-75394976 MS.gene072003:intron 20.0%
!!! AGTTTAAAACAAGTATTTGT+AGG + chr2.4:75395687-75395706 MS.gene072003:intron 20.0%
!!! ATAGCATATAATGTTTTGAT+TGG + chr2.4:75395084-75395103 MS.gene072003:intron 20.0%
!!! ATGTTTTTGTTACTATTATC+CGG + chr2.4:75394077-75394096 MS.gene072003:CDS 20.0%
!!! GATCAAATTATCCATTTTTT+GGG + chr2.4:75394958-75394977 MS.gene072003:intron 20.0%
! AAGAAGGTAATCAACAAAAT+TGG + chr2.4:75394476-75394495 MS.gene072003:intron 25.0%
! AATTGGTTACCAATATTGTT+AGG + chr2.4:75395228-75395247 MS.gene072003:intron 25.0%
! ACTTTCAAAGTCTTCTTTAA+TGG - chr2.4:75395111-75395130 None:intergenic 25.0%
! AGAAGGTAATCAACAAAATT+GGG + chr2.4:75394477-75394496 MS.gene072003:intron 25.0%
! AGTATTAGTGAAAAAGTTAG+CGG + chr2.4:75393333-75393352 MS.gene072003:CDS 25.0%
! ATATTTGCTCTAGTCAATTT+GGG - chr2.4:75394051-75394070 None:intergenic 25.0%
! ATTGAGATAGAGAATTAGTT+GGG + chr2.4:75395272-75395291 MS.gene072003:intron 25.0%
! CAACTGTTTCAATTTCAATT+GGG - chr2.4:75395837-75395856 None:intergenic 25.0%
! CACAAATATTCATGCTAAAA+CGG - chr2.4:75394154-75394173 None:intergenic 25.0%
! CCAAGTTTATATTGGAAAAT+TGG + chr2.4:75395741-75395760 MS.gene072003:intron 25.0%
! CTTTCAAAGTCTTCTTTAAT+GGG - chr2.4:75395110-75395129 None:intergenic 25.0%
! TCAACTGTTTCAATTTCAAT+TGG - chr2.4:75395838-75395857 None:intergenic 25.0%
!! ATTTTCTGTGTACAATAACA+GGG + chr2.4:75394430-75394449 MS.gene072003:intron 25.0%
!! CAGTGTTTTCTTCATAATTT+AGG + chr2.4:75394188-75394207 MS.gene072003:intron 25.0%
!! CCAATTTTCCAATATAAACT+TGG - chr2.4:75395744-75395763 None:intergenic 25.0%
!! GTTGAAAAGCATGTATTAAT+TGG + chr2.4:75395211-75395230 MS.gene072003:intron 25.0%
!! TAGACTGTTGAAAAGTATAA+TGG + chr2.4:75395397-75395416 MS.gene072003:intron 25.0%
!! TATTTTCTGTGTACAATAAC+AGG + chr2.4:75394429-75394448 MS.gene072003:intron 25.0%
!! TCATAATTTAACTTCTGGAT+TGG + chr2.4:75394790-75394809 MS.gene072003:intron 25.0%
!! TCTCTTCATAATTTAACTTC+TGG + chr2.4:75394785-75394804 MS.gene072003:intron 25.0%
!! TCTTTTACTTCGAATGAATT+TGG + chr2.4:75393850-75393869 MS.gene072003:CDS 25.0%
!!! AATTCAAGATTTTGAAGCTT+AGG - chr2.4:75394324-75394343 None:intergenic 25.0%
!!! ATTCAAGATTTTGAAGCTTA+GGG - chr2.4:75394323-75394342 None:intergenic 25.0%
!!! GAATTAGAAAGTACTTTTAC+CGG - chr2.4:75394099-75394118 None:intergenic 25.0%
!!! TTTTTTATTGTGTGCAGATT+TGG + chr2.4:75395811-75395830 MS.gene072003:intron 25.0%
ACCTCAAAACTTGTACTATT+CGG + chr2.4:75394536-75394555 MS.gene072003:intron 30.0%
AGTACACAGATTCGTTAAAA+CGG - chr2.4:75393561-75393580 None:intergenic 30.0%
ATCTAATTGAACTCCAAAAG+TGG - chr2.4:75394941-75394960 None:intergenic 30.0%
ATGCTATCAAAAGACAAACA+AGG - chr2.4:75395071-75395090 None:intergenic 30.0%
ATGTGTGTGTGTTTAATAGA+TGG + chr2.4:75395370-75395389 MS.gene072003:intron 30.0%
CAATATTGATATTGGTGAAG+TGG - chr2.4:75393519-75393538 None:intergenic 30.0%
CTATTAAACACACACACATA+TGG - chr2.4:75395369-75395388 None:intergenic 30.0%
CTCTCATACTATAACTAACT+TGG + chr2.4:75394248-75394267 MS.gene072003:CDS 30.0%
GAGATAAGTATGTCATCATA+AGG - chr2.4:75394231-75394250 None:intergenic 30.0%
GATATTTGCTCTAGTCAATT+TGG - chr2.4:75394052-75394071 None:intergenic 30.0%
GATTGAGATAGAGAATTAGT+TGG + chr2.4:75395271-75395290 MS.gene072003:intron 30.0%
GTACCAATATGAGAAGAAAA+TGG + chr2.4:75395342-75395361 MS.gene072003:intron 30.0%
TACTGTACTTAATGTCTAGA+AGG - chr2.4:75393633-75393652 None:intergenic 30.0%
! AAGGAAACTGTTGATGAAAT+TGG - chr2.4:75393614-75393633 None:intergenic 30.0%
! ATAATTTTCATGGCTCCATT+AGG - chr2.4:75395597-75395616 None:intergenic 30.0%
! GCTTTTAAACTCTTGATGAA+TGG - chr2.4:75394019-75394038 None:intergenic 30.0%
! TAATTTAACTTCTGGATTGG+TGG + chr2.4:75394793-75394812 MS.gene072003:intron 30.0%
! TCTGAAGAACTAGATTAGTT+TGG + chr2.4:75395462-75395481 MS.gene072003:intron 30.0%
! TTCTATGCACTTTTATTCTC+AGG + chr2.4:75393981-75394000 MS.gene072003:CDS 30.0%
! TTTTCTGTGTACAATAACAG+GGG + chr2.4:75394431-75394450 MS.gene072003:intron 30.0%
!! AGGTAAAGGATTTTAAGTGA+TGG - chr2.4:75393880-75393899 None:intergenic 30.0%
!! TTTTAGAGACCATGACAATT+TGG + chr2.4:75394620-75394639 MS.gene072003:intron 30.0%
AAAATTGTTCAAGTGTCCGA+AGG + chr2.4:75394672-75394691 MS.gene072003:intron 35.0%
AAATTGTTCAAGTGTCCGAA+GGG + chr2.4:75394673-75394692 MS.gene072003:intron 35.0%
AAGTCCTTAAGAACCTATGT+CGG - chr2.4:75395141-75395160 None:intergenic 35.0%
AATTTACCTCTAACTGCAGT+TGG + chr2.4:75395524-75395543 MS.gene072003:intron 35.0%
ACAATAACAGGGGTTATTCA+TGG + chr2.4:75394441-75394460 MS.gene072003:intron 35.0%
AGGTAATCAACAAAATTGGG+TGG + chr2.4:75394480-75394499 MS.gene072003:intron 35.0%
ATCCTTTACCTAGAACTCAT+TGG + chr2.4:75393889-75393908 MS.gene072003:CDS 35.0%
ATGGAAATCGGAAATGAAGA+AGG + chr2.4:75394460-75394479 MS.gene072003:CDS 35.0%
CAGAGAATATGACTTCCTAA+TGG + chr2.4:75395579-75395598 MS.gene072003:intron 35.0%
CCTCAAAACTTGTACTATTC+GGG + chr2.4:75394537-75394556 MS.gene072003:intron 35.0%
CTCAAGAGAAAATGTTTCAG+TGG + chr2.4:75395645-75395664 MS.gene072003:intron 35.0%
GTTAGGAAAGGAAAGATCAT+TGG - chr2.4:75393668-75393687 None:intergenic 35.0%
GTTGGATGCCAAGTTTATAT+TGG + chr2.4:75395733-75395752 MS.gene072003:intron 35.0%
TATTGATATTGGTGAAGTGG+AGG - chr2.4:75393516-75393535 None:intergenic 35.0%
TGAAACAGTTGAGTACTTCT+TGG + chr2.4:75395846-75395865 MS.gene072003:CDS 35.0%
TGAGTTTGCGTTGAACAATA+AGG - chr2.4:75393708-75393727 None:intergenic 35.0%
TGCAAAAACTGCCCAAAAAA+TGG - chr2.4:75394972-75394991 None:intergenic 35.0%
TTCAGTGGAGAAAGTTTAAG+TGG + chr2.4:75395660-75395679 MS.gene072003:intron 35.0%
TTGAAAAGCCAATGAGTTCT+AGG - chr2.4:75393900-75393919 None:intergenic 35.0%
TTGACTAGAGCAAATATCAC+TGG + chr2.4:75394054-75394073 MS.gene072003:CDS 35.0%
TTGATACATAACCATAAGGC+AGG + chr2.4:75395006-75395025 MS.gene072003:intron 35.0%
TTGCACGTGAGAATACTTAA+GGG - chr2.4:75393784-75393803 None:intergenic 35.0%
TTTGCACGTGAGAATACTTA+AGG - chr2.4:75393785-75393804 None:intergenic 35.0%
! CATGACAATTTGGAGTGAAA+AGG + chr2.4:75394630-75394649 MS.gene072003:intron 35.0%
! CTTTTCACTCCAAATTGTCA+TGG - chr2.4:75394632-75394651 None:intergenic 35.0%
! GGACCATTTTCTTCTCATAT+TGG - chr2.4:75395348-75395367 None:intergenic 35.0%
!! GGCAATTTGCTAAAGAACTT+AGG - chr2.4:75393763-75393782 None:intergenic 35.0%
AAAGAGGTCGAGACTTACAA+GGG - chr2.4:75393809-75393828 None:intergenic 40.0%
AACAGTTGAGTACTTCTTGG+TGG + chr2.4:75395849-75395868 MS.gene072003:CDS 40.0%
ACAGTTGAGTACTTCTTGGT+GGG + chr2.4:75395850-75395869 MS.gene072003:CDS 40.0%
AGACATCGTGGAACAAATTC+TGG - chr2.4:75394508-75394527 None:intergenic 40.0%
AGGTCTGATAAAAGACATCG+TGG - chr2.4:75394520-75394539 None:intergenic 40.0%
ATATTGGTGAAGTGGAGGTT+GGG - chr2.4:75393511-75393530 None:intergenic 40.0%
CAACGCAAACTCAAGTATCT+TGG + chr2.4:75393715-75393734 MS.gene072003:CDS 40.0%
CAAGAATTGGACATTTCGCA+AGG - chr2.4:75393945-75393964 None:intergenic 40.0%
CAGGGGTTATTCATGGAAAT+CGG + chr2.4:75394448-75394467 MS.gene072003:intron 40.0%
CTAACATAAGCTCACTTTGC+CGG - chr2.4:75394573-75394592 None:intergenic 40.0%
CTCTTTCGATTCAATCTGGA+GGG + chr2.4:75393823-75393842 MS.gene072003:CDS 40.0%
CTTTCCTAACGTCGTCAAAT+GGG + chr2.4:75393678-75393697 MS.gene072003:CDS 40.0%
GAAAGTTATGATGCCGACAT+AGG + chr2.4:75395125-75395144 MS.gene072003:intron 40.0%
GCTTGTAGATCCTCAAGAAT+TGG - chr2.4:75393958-75393977 None:intergenic 40.0%
TAAAGAGACACTATGCTGTG+CGG - chr2.4:75393302-75393321 None:intergenic 40.0%
TAGGTTCGTCCACATCTAAA+CGG - chr2.4:75393744-75393763 None:intergenic 40.0%
TCTTTCGATTCAATCTGGAG+GGG + chr2.4:75393824-75393843 MS.gene072003:CDS 40.0%
TGCGAAATGTCCAATTCTTG+AGG + chr2.4:75393945-75393964 MS.gene072003:CDS 40.0%
TTAACCCATTTGACGACGTT+AGG - chr2.4:75393685-75393704 None:intergenic 40.0%
! CCCGAATAGTACAAGTTTTG+AGG - chr2.4:75394540-75394559 None:intergenic 40.0%
! CGAATCTGTGTACTCTGTTT+TGG + chr2.4:75393567-75393586 MS.gene072003:CDS 40.0%
! GTTTGCATGCATCGATGAAT+AGG + chr2.4:75393371-75393390 MS.gene072003:CDS 40.0%
!! AGCCAATGAGTTCTAGGTAA+AGG - chr2.4:75393894-75393913 None:intergenic 40.0%
!! CTATTCGGGACTTTTTAAGC+CGG + chr2.4:75394551-75394570 MS.gene072003:intron 40.0%
ATGTGGCAAAGAATCTCGTC+TGG - chr2.4:75393409-75393428 None:intergenic 45.0%
CCAATACCAACTGCAGTTAG+AGG - chr2.4:75395533-75395552 None:intergenic 45.0%
CCATTTGACGACGTTAGGAA+AGG - chr2.4:75393680-75393699 None:intergenic 45.0%
CCTCCAGATTGAATCGAAAG+AGG - chr2.4:75393825-75393844 None:intergenic 45.0%
CCTCTTTCGATTCAATCTGG+AGG + chr2.4:75393822-75393841 MS.gene072003:CDS 45.0%
CCTTTCCTAACGTCGTCAAA+TGG + chr2.4:75393677-75393696 MS.gene072003:CDS 45.0%
CGACCTCTTTCGATTCAATC+TGG + chr2.4:75393819-75393838 MS.gene072003:CDS 45.0%
CTGTTTCGACAAAACGCTTG+TGG - chr2.4:75393464-75393483 None:intergenic 45.0%
GAAAGAGGTCGAGACTTACA+AGG - chr2.4:75393810-75393829 None:intergenic 45.0%
GATATTGGTGAAGTGGAGGT+TGG - chr2.4:75393512-75393531 None:intergenic 45.0%
GATGCCGACATAGGTTCTTA+AGG + chr2.4:75395134-75395153 MS.gene072003:intron 45.0%
GCTTGTGGTAACTGCTTCTT+TGG - chr2.4:75393449-75393468 None:intergenic 45.0%
TCTTGGTCTCCGTTTAGATG+TGG + chr2.4:75393732-75393751 MS.gene072003:CDS 45.0%
TGGTCACAAACGACAGAATG+TGG - chr2.4:75393426-75393445 None:intergenic 45.0%
TGTACACATCTCCTGCCTTA+TGG - chr2.4:75395020-75395039 None:intergenic 45.0%
TGTGGTAACTGCTTCTTTGG+TGG - chr2.4:75393446-75393465 None:intergenic 45.0%
! CAAGCGTTTTGTCGAAACAG+TGG + chr2.4:75393464-75393483 MS.gene072003:CDS 45.0%
! CCTCTAACTGCAGTTGGTAT+TGG + chr2.4:75395530-75395549 MS.gene072003:intron 45.0%
! CGAAACAGTGGACTCATCTA+TGG + chr2.4:75393476-75393495 MS.gene072003:CDS 45.0%
!!! GATTTTGAAGCTTAGGGCAG+TGG - chr2.4:75394317-75394336 None:intergenic 45.0%
!! TAAAATAAAATAAAACATAA+AGG - chr2.4:75394401-75394420 None:intergenic 5.0%
TGACATGTTGCAGAGCCCTT+CGG - chr2.4:75394691-75394710 None:intergenic 50.0%
! TTTGAAGCTTAGGGCAGTGG+TGG - chr2.4:75394314-75394333 None:intergenic 50.0%
GGAACCAGCAGCGTCTCGAG+AGG - chr2.4:75393593-75393612 None:intergenic 65.0%
TTGGCCTCTCGAGACGCTGC+TGG + chr2.4:75393586-75393605 MS.gene072003:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 75393274 75395880 75393274 ID=MS.gene072003
chr2.4 mRNA 75393274 75395880 75393274 ID=MS.gene072003.t1;Parent=MS.gene072003
chr2.4 exon 75393274 75394098 75393274 ID=MS.gene072003.t1.exon1;Parent=MS.gene072003.t1
chr2.4 CDS 75393274 75394098 75393274 ID=cds.MS.gene072003.t1;Parent=MS.gene072003.t1
chr2.4 exon 75394210 75394269 75394210 ID=MS.gene072003.t1.exon2;Parent=MS.gene072003.t1
chr2.4 CDS 75394210 75394269 75394210 ID=cds.MS.gene072003.t1;Parent=MS.gene072003.t1
chr2.4 exon 75394451 75394481 75394451 ID=MS.gene072003.t1.exon3;Parent=MS.gene072003.t1
chr2.4 CDS 75394451 75394481 75394451 ID=cds.MS.gene072003.t1;Parent=MS.gene072003.t1
chr2.4 exon 75395828 75395880 75395828 ID=MS.gene072003.t1.exon4;Parent=MS.gene072003.t1
chr2.4 CDS 75395828 75395880 75395828 ID=cds.MS.gene072003.t1;Parent=MS.gene072003.t1
Gene Sequence

>MS.gene072003

ATGAAACGAGCAGAGACTTTCTTTACCGCACAGCATAGTGTCTCTTTACTCACAACAAGAGTATTAGTGAAAAAGTTAGCGGCACAACTTATTGTTCGTTTGCATGCATCGATGAATAGGATAAGCAGTTTGCCAGACGAGATTCTTTGCCACATTCTGTCGTTTGTGACCACCAAAGAAGCAGTTACCACAAGCGTTTTGTCGAAACAGTGGACTCATCTATGGCTCTCTGTTCCCAACCTCCACTTCACCAATATCAATATTGATACAACAGAATCTAACTTCCGTTTTAACGAATCTGTGTACTCTGTTTTGGCCTCTCGAGACGCTGCTGGTTCCAATTTCATCAACAGTTTCCTTCTAGACATTAAGTACAGTAGTTCTAATCTTGCCAATGATCTTTCCTTTCCTAACGTCGTCAAATGGGTTAACCTTATTGTTCAACGCAAACTCAAGTATCTTGGTCTCCGTTTAGATGTGGACGAACCTAAGTTCTTTAGCAAATTGCCCTTAAGTATTCTCACGTGCAAAACCCTTGTAAGTCTCGACCTCTTTCGATTCAATCTGGAGGGGTTTTCTTTTACTTCGAATGAATTTGGACTTCCATCACTTAAAATCCTTTACCTAGAACTCATTGGCTTTTCAAAAGTTCGAGATTTTATGTTGCTCCTTGCGAAATGTCCAATTCTTGAGGATCTACAAGCGTCTTCTATGCACTTTTATTCTCAGGAAGATTCTCTTGCCATTCATCAAGAGTTTAAAAGCTTAAGCTTACCCAAATTGACTAGAGCAAATATCACTGGATGTTTTTGTTACTATTATCCGGTAAAAGTACTTTCTAATTCAAATTATTTGTACATAGATAAATTAAAGTCTTCCGTTTTAGCATGAATATTTGTGATGCACTGATTTAACAGTGTTTTCTTCATAATTTAGGTTAATCAGCTGCAACATCCTTATGATGACATACTTATCTCTCATACTATAACTAACTTGGTACTGATCAATAGTTGTAATAGTACTGTAATAGAAGTGCTCCACCACTGCCCTAAGCTTCAAAATCTTGAATTTTATAAGGTTTGTTAAGTTTAAGAATCATATTTCATTTTTCTTTTCTTGGCATACCTTTATGTTTTATTTTATTTTATTTTATTTTATTTTCTGTGTACAATAACAGGGGTTATTCATGGAAATCGGAAATGAAGAAGGTAATCAACAAAATTGGGTGGAACCAGAATTTGTTCCACGATGTCTTTTATCAGACCTCAAAACTTGTACTATTCGGGACTTTTTAAGCCGGCAAAGTGAGCTTATGTTAGAAAAATATATTTTGAAGAATGCTAAAATTTTAGAGACCATGACAATTTGGAGTGAAAAGGAACAATCTGAAATAGAAAGAAAATTGTTCAAGTGTCCGAAGGGCTCTGCAACATGTCAACTTTCAGTTTATGTAAGTAGTAGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATAATTTAACTTCTGGATTGGTGGTTTGAGTTGAACTATGAGCTATTAATTATGAAGATCATGACTTTGTCTTGCTGCACAAGTGAAGTAAACATGATTTAGTTAGTATTTTTCTTATATGATTGTTTGTATATTTATTTATTAAACCACTTTTGGAGTTCAATTAGATCAAATTATCCATTTTTTGGGCAGTTTTTGCATGCTAAATTCAAATTTGATACATAACCATAAGGCAGGAGATGTGTACAAGATTAAATAATGTTTTCTCAAAGGAATCCTTGTTTGTCTTTTGATAGCATATAATGTTTTGATTGGCCCATTAAAGAAGACTTTGAAAGTTATGATGCCGACATAGGTTCTTAAGGACTTGAAAGTTTATCAACCTTTTTTCATATTTCTAGTGATAATGATTTGAAATTGTTGAAAAGCATGTATTAATTGGTTACCAATATTGTTAGGTAGAATATTCTGAAGAACTAGATTGAGATAGAGAATTAGTTGGGTCTACATGCTTCTGTTATATTGATTATGAAGTTTACTAAAGTAAGGTGTACCAATATGAGAAGAAAATGGTCCATATGTGTGTGTGTTTAATAGATGGACAGTAGACTGTTGAAAAGTATAATGGCGACCTTACTTTCAAGAATATTGTTAGGTAGAAGATGAAGATTCTGAAGAACTAGATTAGTTTGGTGTATATATGCTTGTGTAATATAGATTTTGAAGATTGCTAATTTACCTCTAACTGCAGTTGGTATTGGAATTATTTGAAAATCACTATTGGCATCAGAGAATATGACTTCCTAATGGAGCCATGAAAATTATTGATAGAAAAAAAAAATCTTCAAATTGTCTCAAGAGAAAATGTTTCAGTGGAGAAAGTTTAAGTGGAGAAAGTTTAAAACAAGTATTTGTAGGTCTCAAGTTTATATTGTATTTGTGTTGGATGCCAAGTTTATATTGGAAAATTGGATTCATAATTATTAAATTTATGCAATTCAATTAATCTTATTATAACATTTTTTATTGTGTGCAGATTTGGCCCAATTGAAATTGAAACAGTTGAGTACTTCTTGGTGGGTTACTTAA

Protein sequence

>MS.gene072003.t1

MKRAETFFTAQHSVSLLTTRVLVKKLAAQLIVRLHASMNRISSLPDEILCHILSFVTTKEAVTTSVLSKQWTHLWLSVPNLHFTNINIDTTESNFRFNESVYSVLASRDAAGSNFINSFLLDIKYSSSNLANDLSFPNVVKWVNLIVQRKLKYLGLRLDVDEPKFFSKLPLSILTCKTLVSLDLFRFNLEGFSFTSNEFGLPSLKILYLELIGFSKVRDFMLLLAKCPILEDLQASSMHFYSQEDSLAIHQEFKSLSLPKLTRANITGCFCYYYPVNQLQHPYDDILISHTITNLGLFMEIGNEEDLAQLKLKQLSTSWWVT