Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033695.t1 | PNY06254.1 | 58.8 | 335 | 128 | 5 | 15 | 348 | 11 | 336 | 4.00E-96 | 361.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033695.t1 | Q9FZ52 | 27.7 | 368 | 186 | 12 | 18 | 335 | 15 | 352 | 7.9e-24 | 112.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033695.t1 | A0A2K3NT89 | 58.8 | 335 | 128 | 5 | 15 | 348 | 11 | 336 | 2.9e-96 | 361.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033695.t1 | MTR_2g007450 | 52.802 | 339 | 150 | 6 | 1 | 339 | 1 | 329 | 7.16e-106 | 317 |
MS.gene033695.t1 | MTR_7g083740 | 52.507 | 339 | 91 | 8 | 3 | 339 | 2 | 272 | 1.25e-96 | 292 |
MS.gene033695.t1 | MTR_1g053025 | 50.309 | 324 | 135 | 8 | 17 | 339 | 1 | 299 | 2.38e-87 | 269 |
MS.gene033695.t1 | MTR_3g026920 | 47.006 | 334 | 135 | 10 | 16 | 338 | 17 | 319 | 3.20e-76 | 241 |
MS.gene033695.t1 | MTR_4g098590 | 46.541 | 318 | 141 | 8 | 20 | 337 | 1 | 289 | 1.16e-74 | 236 |
MS.gene033695.t1 | MTR_2g007500 | 45.075 | 335 | 139 | 9 | 5 | 339 | 3 | 292 | 3.98e-71 | 225 |
MS.gene033695.t1 | MTR_2g007400 | 41.972 | 355 | 162 | 12 | 5 | 353 | 3 | 319 | 2.19e-70 | 226 |
MS.gene033695.t1 | MTR_3g107160 | 41.538 | 325 | 144 | 11 | 18 | 337 | 10 | 293 | 5.05e-65 | 211 |
MS.gene033695.t1 | MTR_1g107385 | 41.088 | 331 | 165 | 7 | 18 | 346 | 32 | 334 | 5.59e-63 | 207 |
MS.gene033695.t1 | MTR_5g083890 | 41.463 | 328 | 164 | 7 | 15 | 339 | 3 | 305 | 3.88e-60 | 202 |
MS.gene033695.t1 | MTR_7g075820 | 38.810 | 353 | 172 | 11 | 15 | 363 | 3 | 315 | 2.90e-59 | 196 |
MS.gene033695.t1 | MTR_2g005990 | 40.729 | 329 | 155 | 10 | 16 | 339 | 4 | 297 | 9.39e-59 | 195 |
MS.gene033695.t1 | MTR_3g107100 | 40.867 | 323 | 148 | 9 | 18 | 337 | 11 | 293 | 1.98e-56 | 189 |
MS.gene033695.t1 | MTR_2g007550 | 37.427 | 342 | 118 | 7 | 1 | 339 | 1 | 249 | 1.70e-55 | 185 |
MS.gene033695.t1 | MTR_3g107120 | 41.071 | 336 | 139 | 11 | 18 | 337 | 9 | 301 | 5.18e-55 | 186 |
MS.gene033695.t1 | MTR_2g008320 | 37.647 | 340 | 144 | 13 | 16 | 339 | 50 | 337 | 1.19e-48 | 170 |
MS.gene033695.t1 | MTR_3g099830 | 38.182 | 330 | 134 | 9 | 16 | 339 | 10 | 275 | 2.86e-48 | 167 |
MS.gene033695.t1 | MTR_2g008310 | 37.994 | 329 | 152 | 11 | 17 | 339 | 1 | 283 | 5.51e-48 | 167 |
MS.gene033695.t1 | MTR_2g007360 | 38.485 | 330 | 132 | 8 | 16 | 341 | 10 | 272 | 1.99e-46 | 162 |
MS.gene033695.t1 | MTR_2g007530 | 37.778 | 270 | 131 | 8 | 16 | 249 | 17 | 285 | 1.96e-40 | 145 |
MS.gene033695.t1 | MTR_2g007530 | 53.846 | 78 | 28 | 2 | 266 | 342 | 197 | 267 | 7.66e-14 | 72.0 |
MS.gene033695.t1 | MTR_7g007340 | 35.952 | 331 | 137 | 9 | 12 | 339 | 4 | 262 | 2.83e-37 | 138 |
MS.gene033695.t1 | MTR_6g045333 | 31.627 | 332 | 180 | 10 | 17 | 339 | 60 | 353 | 4.57e-29 | 117 |
MS.gene033695.t1 | MTR_7g115270 | 29.697 | 330 | 191 | 8 | 15 | 335 | 9 | 306 | 1.29e-28 | 115 |
MS.gene033695.t1 | MTR_1g041245 | 30.357 | 336 | 172 | 11 | 15 | 339 | 8 | 292 | 6.14e-28 | 113 |
MS.gene033695.t1 | MTR_7g075800 | 30.347 | 346 | 189 | 13 | 15 | 340 | 6 | 319 | 6.53e-28 | 115 |
MS.gene033695.t1 | MTR_3g105060 | 30.154 | 325 | 171 | 9 | 15 | 334 | 11 | 284 | 2.74e-27 | 111 |
MS.gene033695.t1 | MTR_8g085430 | 34.061 | 229 | 118 | 7 | 15 | 236 | 8 | 210 | 9.86e-27 | 108 |
MS.gene033695.t1 | MTR_7g032380 | 29.141 | 326 | 161 | 10 | 15 | 339 | 8 | 264 | 1.37e-26 | 108 |
MS.gene033695.t1 | MTR_7g007370 | 33.025 | 324 | 128 | 11 | 17 | 339 | 16 | 251 | 1.85e-26 | 108 |
MS.gene033695.t1 | MTR_5g073420 | 31.751 | 337 | 168 | 15 | 8 | 335 | 1 | 284 | 3.23e-26 | 108 |
MS.gene033695.t1 | MTR_3g082890 | 30.833 | 360 | 183 | 11 | 1 | 340 | 1 | 314 | 4.57e-24 | 103 |
MS.gene033695.t1 | MTR_7g034115 | 31.085 | 341 | 162 | 14 | 15 | 339 | 8 | 291 | 1.86e-23 | 100 |
MS.gene033695.t1 | MTR_3g082890 | 30.919 | 359 | 182 | 11 | 1 | 339 | 81 | 393 | 1.88e-23 | 101 |
MS.gene033695.t1 | MTR_3g040700 | 30.816 | 331 | 160 | 15 | 17 | 337 | 42 | 313 | 2.62e-23 | 100 |
MS.gene033695.t1 | MTR_1089s0010 | 28.125 | 352 | 201 | 10 | 17 | 363 | 7 | 311 | 4.22e-23 | 99.8 |
MS.gene033695.t1 | MTR_7g026500 | 30.588 | 340 | 194 | 14 | 6 | 339 | 2 | 305 | 5.04e-23 | 99.8 |
MS.gene033695.t1 | MTR_3g071850 | 29.940 | 334 | 183 | 10 | 17 | 339 | 23 | 316 | 8.02e-23 | 100 |
MS.gene033695.t1 | MTR_7g098480 | 31.765 | 340 | 171 | 14 | 3 | 335 | 8 | 293 | 1.12e-22 | 99.4 |
MS.gene033695.t1 | MTR_5g082930 | 53.398 | 103 | 45 | 2 | 20 | 120 | 17 | 118 | 1.78e-22 | 94.4 |
MS.gene033695.t1 | MTR_7g098510 | 32.267 | 344 | 170 | 17 | 3 | 337 | 8 | 297 | 8.61e-22 | 95.9 |
MS.gene033695.t1 | MTR_7g032370 | 28.391 | 317 | 156 | 10 | 33 | 339 | 5 | 260 | 1.20e-21 | 95.1 |
MS.gene033695.t1 | MTR_7g033990 | 27.729 | 339 | 189 | 11 | 16 | 348 | 9 | 297 | 1.23e-21 | 95.9 |
MS.gene033695.t1 | MTR_3g467400 | 29.882 | 338 | 193 | 14 | 17 | 339 | 2 | 310 | 1.73e-21 | 94.7 |
MS.gene033695.t1 | MTR_7g056420 | 30.183 | 328 | 157 | 11 | 18 | 339 | 9 | 270 | 4.57e-21 | 95.5 |
MS.gene033695.t1 | MTR_7g098570 | 29.226 | 349 | 175 | 15 | 1 | 335 | 7 | 297 | 4.73e-21 | 94.7 |
MS.gene033695.t1 | MTR_7g056430 | 30.183 | 328 | 157 | 11 | 18 | 339 | 9 | 270 | 4.76e-21 | 95.5 |
MS.gene033695.t1 | MTR_1g108820 | 29.268 | 369 | 189 | 16 | 15 | 363 | 5 | 321 | 6.98e-21 | 93.2 |
MS.gene033695.t1 | MTR_3g036250 | 30.746 | 335 | 163 | 14 | 17 | 341 | 4 | 279 | 7.73e-21 | 92.8 |
MS.gene033695.t1 | MTR_1g108820 | 30.636 | 346 | 169 | 16 | 15 | 340 | 5 | 299 | 2.42e-20 | 91.3 |
MS.gene033695.t1 | MTR_7g007080 | 27.826 | 345 | 172 | 12 | 18 | 342 | 4 | 291 | 2.69e-20 | 91.7 |
MS.gene033695.t1 | MTR_5g058000 | 29.254 | 335 | 169 | 12 | 17 | 339 | 7 | 285 | 3.20e-20 | 91.3 |
MS.gene033695.t1 | MTR_5g073340 | 30.581 | 327 | 156 | 12 | 17 | 337 | 7 | 268 | 3.68e-20 | 90.1 |
MS.gene033695.t1 | MTR_3g108150 | 28.691 | 359 | 174 | 13 | 13 | 348 | 4 | 303 | 3.77e-20 | 91.3 |
MS.gene033695.t1 | MTR_3g107140 | 32.719 | 217 | 114 | 7 | 27 | 235 | 1 | 193 | 4.81e-20 | 87.4 |
MS.gene033695.t1 | MTR_7g056433 | 29.940 | 334 | 182 | 12 | 12 | 337 | 6 | 295 | 5.73e-20 | 90.5 |
MS.gene033695.t1 | MTR_5g073370 | 29.052 | 327 | 184 | 10 | 18 | 339 | 5 | 288 | 1.44e-19 | 89.4 |
MS.gene033695.t1 | MTR_5g045170 | 28.824 | 340 | 173 | 13 | 17 | 339 | 13 | 300 | 4.41e-19 | 88.2 |
MS.gene033695.t1 | MTR_5g058100 | 28.267 | 329 | 190 | 9 | 16 | 339 | 7 | 294 | 1.00e-18 | 87.0 |
MS.gene033695.t1 | MTR_2g007460 | 41.322 | 121 | 50 | 3 | 16 | 136 | 10 | 109 | 1.15e-18 | 81.3 |
MS.gene033695.t1 | MTR_6g022360 | 29.805 | 359 | 183 | 12 | 17 | 363 | 42 | 343 | 1.38e-18 | 86.7 |
MS.gene033695.t1 | MTR_7g034090 | 38.462 | 169 | 79 | 4 | 16 | 180 | 2 | 149 | 1.55e-18 | 86.7 |
MS.gene033695.t1 | MTR_7g055943 | 30.240 | 334 | 177 | 11 | 16 | 339 | 38 | 325 | 1.76e-18 | 86.7 |
MS.gene033695.t1 | MTR_5g045510 | 29.139 | 302 | 172 | 11 | 14 | 315 | 8 | 267 | 1.94e-18 | 86.3 |
MS.gene033695.t1 | MTR_4g134150 | 28.519 | 270 | 138 | 8 | 15 | 280 | 11 | 229 | 4.04e-18 | 82.8 |
MS.gene033695.t1 | MTR_1g066830 | 27.964 | 329 | 187 | 10 | 14 | 333 | 4 | 291 | 5.60e-18 | 84.7 |
MS.gene033695.t1 | MTR_5g061680 | 27.077 | 325 | 165 | 9 | 16 | 335 | 9 | 266 | 7.36e-18 | 84.0 |
MS.gene033695.t1 | MTR_7g056447 | 32.536 | 209 | 111 | 7 | 15 | 222 | 6 | 185 | 7.70e-18 | 83.2 |
MS.gene033695.t1 | MTR_3g023630 | 27.829 | 327 | 175 | 11 | 17 | 334 | 7 | 281 | 8.07e-18 | 84.3 |
MS.gene033695.t1 | MTR_5g031970 | 26.786 | 336 | 151 | 11 | 17 | 340 | 15 | 267 | 1.34e-17 | 83.6 |
MS.gene033695.t1 | MTR_6g011460 | 28.267 | 329 | 185 | 12 | 17 | 339 | 45 | 328 | 1.38e-17 | 84.0 |
MS.gene033695.t1 | MTR_6g040270 | 28.308 | 325 | 183 | 10 | 20 | 339 | 10 | 289 | 1.76e-17 | 83.2 |
MS.gene033695.t1 | MTR_8g445780 | 26.404 | 356 | 199 | 13 | 18 | 335 | 13 | 343 | 2.34e-17 | 83.2 |
MS.gene033695.t1 | MTR_5g008920 | 27.190 | 331 | 184 | 10 | 16 | 339 | 10 | 290 | 2.65e-17 | 82.8 |
MS.gene033695.t1 | MTR_7g088260 | 28.212 | 358 | 195 | 14 | 18 | 363 | 91 | 398 | 4.20e-17 | 82.8 |
MS.gene033695.t1 | MTR_0543s0010 | 26.997 | 363 | 176 | 13 | 3 | 347 | 75 | 366 | 8.91e-17 | 81.6 |
MS.gene033695.t1 | MTR_0492s0020 | 26.997 | 363 | 176 | 13 | 3 | 347 | 75 | 366 | 9.21e-17 | 81.6 |
MS.gene033695.t1 | MTR_6g022500 | 26.888 | 331 | 190 | 12 | 17 | 339 | 100 | 386 | 1.50e-16 | 81.3 |
MS.gene033695.t1 | MTR_8g077460 | 29.143 | 350 | 184 | 14 | 18 | 357 | 10 | 305 | 1.53e-16 | 80.5 |
MS.gene033695.t1 | MTR_7g056280 | 32.308 | 195 | 107 | 6 | 20 | 203 | 8 | 188 | 2.07e-16 | 80.9 |
MS.gene033695.t1 | MTR_6g013160 | 26.984 | 378 | 202 | 12 | 11 | 340 | 2 | 353 | 6.90e-16 | 79.0 |
MS.gene033695.t1 | MTR_7g056277 | 27.160 | 324 | 181 | 10 | 18 | 335 | 259 | 533 | 7.59e-16 | 79.3 |
MS.gene033695.t1 | MTR_5g007410 | 28.916 | 332 | 182 | 14 | 20 | 339 | 28 | 317 | 1.12e-15 | 78.6 |
MS.gene033695.t1 | MTR_8g062010 | 31.718 | 227 | 114 | 10 | 1 | 222 | 1 | 191 | 1.93e-15 | 77.8 |
MS.gene033695.t1 | MTR_5g084070 | 24.474 | 380 | 204 | 11 | 1 | 340 | 1 | 337 | 2.72e-15 | 77.0 |
MS.gene033695.t1 | MTR_1g013560 | 28.326 | 233 | 141 | 9 | 1 | 229 | 1 | 211 | 3.32e-15 | 76.3 |
MS.gene033695.t1 | MTR_2g036470 | 27.647 | 340 | 194 | 11 | 16 | 345 | 12 | 309 | 3.39e-15 | 76.6 |
MS.gene033695.t1 | MTR_8g062080 | 32.645 | 242 | 124 | 13 | 1 | 233 | 6 | 217 | 3.75e-15 | 76.6 |
MS.gene033695.t1 | MTR_7g056287 | 26.687 | 326 | 184 | 10 | 18 | 337 | 3 | 279 | 3.75e-15 | 76.3 |
MS.gene033695.t1 | MTR_7g033470 | 37.607 | 117 | 68 | 2 | 8 | 120 | 4 | 119 | 3.86e-15 | 72.4 |
MS.gene033695.t1 | MTR_6g044560 | 29.254 | 335 | 177 | 11 | 16 | 335 | 176 | 465 | 4.00e-15 | 77.0 |
MS.gene033695.t1 | MTR_7g034110 | 24.332 | 337 | 166 | 10 | 15 | 348 | 8 | 258 | 5.47e-15 | 75.9 |
MS.gene033695.t1 | MTR_1g013560 | 28.326 | 233 | 141 | 9 | 1 | 229 | 1 | 211 | 6.96e-15 | 75.9 |
MS.gene033695.t1 | MTR_1g492880 | 47.727 | 88 | 42 | 2 | 18 | 105 | 6 | 89 | 7.70e-15 | 70.5 |
MS.gene033695.t1 | MTR_1g492880 | 47.727 | 88 | 42 | 2 | 18 | 105 | 6 | 89 | 8.14e-15 | 70.1 |
MS.gene033695.t1 | MTR_5g039450 | 26.426 | 333 | 177 | 13 | 17 | 339 | 5 | 279 | 8.41e-15 | 75.1 |
MS.gene033695.t1 | MTR_6g044572 | 29.042 | 334 | 177 | 11 | 17 | 335 | 1 | 289 | 1.01e-14 | 75.1 |
MS.gene033695.t1 | MTR_8g058970 | 29.876 | 241 | 134 | 9 | 5 | 227 | 6 | 229 | 1.20e-14 | 75.5 |
MS.gene033695.t1 | MTR_8g468760 | 29.032 | 217 | 130 | 8 | 16 | 226 | 7 | 205 | 1.25e-14 | 75.1 |
MS.gene033695.t1 | MTR_8g062310 | 27.511 | 229 | 131 | 7 | 4 | 230 | 11 | 206 | 1.70e-14 | 74.7 |
MS.gene033695.t1 | MTR_1g014450 | 29.108 | 213 | 131 | 7 | 18 | 229 | 16 | 209 | 6.06e-14 | 73.2 |
MS.gene033695.t1 | MTR_7g114710 | 27.108 | 332 | 161 | 13 | 15 | 337 | 10 | 269 | 9.24e-14 | 72.0 |
MS.gene033695.t1 | MTR_2g082800 | 27.755 | 245 | 146 | 9 | 1 | 232 | 9 | 235 | 2.19e-13 | 71.2 |
MS.gene033695.t1 | MTR_8g058965 | 31.839 | 223 | 119 | 9 | 16 | 224 | 11 | 214 | 2.89e-13 | 71.2 |
MS.gene033695.t1 | MTR_2g091145 | 27.074 | 229 | 146 | 7 | 1 | 227 | 3 | 212 | 3.27e-13 | 70.9 |
MS.gene033695.t1 | MTR_7g060470 | 27.193 | 342 | 178 | 13 | 18 | 335 | 3 | 297 | 4.16e-13 | 70.5 |
MS.gene033695.t1 | MTR_6g029350 | 38.583 | 127 | 58 | 3 | 213 | 339 | 1 | 107 | 5.54e-13 | 68.2 |
MS.gene033695.t1 | MTR_7g090750 | 33.649 | 211 | 120 | 6 | 17 | 227 | 10 | 200 | 6.52e-13 | 70.1 |
MS.gene033695.t1 | MTR_3g110010 | 31.100 | 209 | 110 | 6 | 18 | 224 | 13 | 189 | 8.74e-13 | 70.1 |
MS.gene033695.t1 | MTR_3g048290 | 28.571 | 238 | 147 | 5 | 17 | 253 | 22 | 237 | 1.33e-12 | 68.9 |
MS.gene033695.t1 | MTR_3g109982 | 31.280 | 211 | 111 | 6 | 18 | 226 | 13 | 191 | 1.47e-12 | 69.3 |
MS.gene033695.t1 | MTR_4g080773 | 26.087 | 391 | 184 | 14 | 18 | 337 | 19 | 375 | 1.59e-12 | 68.9 |
MS.gene033695.t1 | MTR_2g047858 | 29.075 | 227 | 137 | 8 | 5 | 229 | 101 | 305 | 1.83e-12 | 68.9 |
MS.gene033695.t1 | MTR_3g114200 | 31.183 | 186 | 89 | 6 | 1 | 176 | 1 | 157 | 2.21e-12 | 65.1 |
MS.gene033695.t1 | MTR_4g080773 | 26.087 | 391 | 184 | 14 | 18 | 337 | 19 | 375 | 2.30e-12 | 68.6 |
MS.gene033695.t1 | MTR_5g039490 | 27.526 | 287 | 161 | 12 | 2 | 279 | 6 | 254 | 2.68e-12 | 67.8 |
MS.gene033695.t1 | MTR_4g032730 | 28.700 | 223 | 130 | 8 | 17 | 231 | 14 | 215 | 4.99e-12 | 67.4 |
MS.gene033695.t1 | MTR_5g092960 | 26.512 | 215 | 136 | 6 | 16 | 226 | 17 | 213 | 6.49e-12 | 66.6 |
MS.gene033695.t1 | MTR_3g113782 | 45.349 | 86 | 38 | 3 | 1 | 78 | 1 | 85 | 1.01e-11 | 60.8 |
MS.gene033695.t1 | MTR_5g092960 | 26.512 | 215 | 136 | 6 | 16 | 226 | 17 | 213 | 1.07e-11 | 66.2 |
MS.gene033695.t1 | MTR_2g082880 | 30.894 | 123 | 71 | 2 | 18 | 138 | 10 | 120 | 1.27e-11 | 65.9 |
MS.gene033695.t1 | MTR_2g008300 | 52.857 | 70 | 29 | 1 | 166 | 235 | 4 | 69 | 1.32e-11 | 60.1 |
MS.gene033695.t1 | MTR_2g082850 | 32.432 | 148 | 72 | 6 | 1 | 138 | 9 | 138 | 1.54e-11 | 65.5 |
MS.gene033695.t1 | MTR_2g082860 | 49.206 | 63 | 31 | 1 | 1 | 62 | 9 | 71 | 1.71e-11 | 61.2 |
MS.gene033695.t1 | MTR_0009s0080 | 26.727 | 333 | 187 | 12 | 20 | 339 | 20 | 308 | 2.06e-11 | 65.5 |
MS.gene033695.t1 | MTR_1g013580 | 27.273 | 231 | 146 | 7 | 1 | 229 | 1 | 211 | 2.22e-11 | 65.1 |
MS.gene033695.t1 | MTR_8g467800 | 30.000 | 230 | 135 | 9 | 2 | 229 | 3 | 208 | 2.52e-11 | 64.7 |
MS.gene033695.t1 | MTR_2g007100 | 47.368 | 76 | 35 | 2 | 17 | 87 | 1 | 76 | 2.66e-11 | 59.7 |
MS.gene033695.t1 | MTR_4g050250 | 27.626 | 257 | 141 | 8 | 5 | 243 | 8 | 237 | 4.18e-11 | 64.3 |
MS.gene033695.t1 | MTR_5g076150 | 30.693 | 202 | 102 | 9 | 151 | 333 | 18 | 200 | 4.77e-11 | 62.8 |
MS.gene033695.t1 | MTR_8g469020 | 28.889 | 225 | 129 | 7 | 14 | 224 | 3 | 210 | 4.98e-11 | 64.3 |
MS.gene033695.t1 | MTR_8g062270 | 24.670 | 227 | 146 | 7 | 16 | 237 | 14 | 220 | 5.48e-11 | 63.9 |
MS.gene033695.t1 | MTR_8g467800 | 30.000 | 230 | 135 | 9 | 2 | 229 | 3 | 208 | 5.52e-11 | 63.9 |
MS.gene033695.t1 | MTR_8g014290 | 31.875 | 160 | 91 | 5 | 18 | 169 | 10 | 159 | 8.87e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033695.t1 | AT1G16930 | 27.642 | 369 | 185 | 11 | 18 | 335 | 15 | 352 | 9.96e-25 | 105 |
MS.gene033695.t1 | AT1G16930 | 27.642 | 369 | 185 | 11 | 18 | 335 | 15 | 352 | 9.96e-25 | 105 |
MS.gene033695.t1 | AT1G16930 | 27.642 | 369 | 185 | 11 | 18 | 335 | 15 | 352 | 9.96e-25 | 105 |
MS.gene033695.t1 | AT1G78750 | 29.771 | 393 | 188 | 18 | 2 | 335 | 3 | 366 | 1.78e-24 | 104 |
MS.gene033695.t1 | AT1G78750 | 29.771 | 393 | 188 | 18 | 2 | 335 | 3 | 366 | 1.78e-24 | 104 |
MS.gene033695.t1 | AT4G13985 | 27.792 | 385 | 205 | 14 | 4 | 337 | 5 | 367 | 2.18e-23 | 101 |
MS.gene033695.t1 | AT3G60040 | 29.553 | 291 | 148 | 10 | 18 | 277 | 13 | 277 | 3.48e-19 | 89.4 |
MS.gene033695.t1 | AT3G58860 | 26.997 | 363 | 198 | 13 | 17 | 337 | 6 | 343 | 5.11e-19 | 88.6 |
MS.gene033695.t1 | AT3G52680 | 26.479 | 355 | 201 | 13 | 18 | 341 | 21 | 346 | 6.56e-19 | 87.4 |
MS.gene033695.t1 | AT3G60040 | 26.685 | 371 | 197 | 13 | 18 | 335 | 233 | 581 | 6.97e-19 | 89.0 |
MS.gene033695.t1 | AT3G60040 | 26.685 | 371 | 197 | 13 | 18 | 335 | 232 | 580 | 7.09e-19 | 89.0 |
MS.gene033695.t1 | AT3G60040 | 29.553 | 291 | 148 | 10 | 18 | 277 | 230 | 494 | 7.28e-19 | 88.6 |
MS.gene033695.t1 | AT3G60040 | 29.553 | 291 | 148 | 10 | 18 | 277 | 232 | 496 | 7.99e-19 | 88.6 |
MS.gene033695.t1 | AT4G00160 | 28.045 | 353 | 192 | 13 | 18 | 337 | 16 | 339 | 1.10e-18 | 87.4 |
MS.gene033695.t1 | AT4G14103 | 28.238 | 386 | 182 | 14 | 18 | 342 | 8 | 359 | 1.54e-18 | 87.0 |
MS.gene033695.t1 | AT3G58940 | 26.158 | 367 | 191 | 15 | 17 | 335 | 1 | 335 | 2.34e-18 | 87.0 |
MS.gene033695.t1 | AT3G58940 | 26.158 | 367 | 191 | 15 | 17 | 335 | 1 | 335 | 2.34e-18 | 87.0 |
MS.gene033695.t1 | AT3G52680 | 26.781 | 351 | 197 | 13 | 18 | 337 | 21 | 342 | 2.62e-18 | 86.3 |
MS.gene033695.t1 | AT4G14103 | 27.778 | 378 | 180 | 13 | 18 | 335 | 8 | 352 | 3.63e-18 | 85.5 |
MS.gene033695.t1 | AT4G14103 | 27.778 | 378 | 180 | 13 | 18 | 335 | 8 | 352 | 3.63e-18 | 85.5 |
MS.gene033695.t1 | AT3G26922 | 32.857 | 210 | 111 | 6 | 18 | 226 | 14 | 194 | 4.75e-18 | 84.0 |
MS.gene033695.t1 | AT3G26922 | 32.857 | 210 | 111 | 6 | 18 | 226 | 14 | 194 | 4.75e-18 | 84.0 |
MS.gene033695.t1 | AT1G69630 | 28.316 | 392 | 191 | 17 | 1 | 335 | 1 | 359 | 6.51e-18 | 85.1 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 2.17e-17 | 82.0 |
MS.gene033695.t1 | AT4G26340 | 27.841 | 352 | 193 | 12 | 17 | 337 | 1 | 322 | 2.25e-17 | 83.2 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 3.65e-17 | 82.0 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 3.65e-17 | 82.0 |
MS.gene033695.t1 | AT3G59190 | 25.871 | 402 | 203 | 14 | 18 | 353 | 12 | 384 | 4.05e-17 | 82.4 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 4.15e-17 | 82.4 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 4.15e-17 | 82.4 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 4.15e-17 | 82.4 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 4.15e-17 | 82.4 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 21 | 211 | 4.75e-17 | 82.4 |
MS.gene033695.t1 | AT1G06630 | 34.123 | 211 | 115 | 7 | 18 | 224 | 12 | 202 | 7.24e-17 | 82.0 |
MS.gene033695.t1 | AT1G51370 | 24.745 | 392 | 204 | 14 | 2 | 348 | 4 | 349 | 8.82e-17 | 81.6 |
MS.gene033695.t1 | AT1G51370 | 24.745 | 392 | 204 | 14 | 2 | 348 | 4 | 349 | 1.00e-16 | 81.6 |
MS.gene033695.t1 | AT1G51370 | 24.742 | 388 | 201 | 14 | 2 | 344 | 4 | 345 | 1.02e-16 | 80.9 |
MS.gene033695.t1 | AT3G59200 | 24.485 | 388 | 200 | 13 | 18 | 340 | 7 | 366 | 1.22e-16 | 81.6 |
MS.gene033695.t1 | AT2G26860 | 31.132 | 212 | 120 | 7 | 17 | 226 | 1 | 188 | 2.05e-16 | 80.5 |
MS.gene033695.t1 | AT2G26860 | 31.132 | 212 | 120 | 7 | 17 | 226 | 1 | 188 | 2.05e-16 | 80.5 |
MS.gene033695.t1 | AT3G59200 | 25.974 | 385 | 192 | 15 | 18 | 337 | 7 | 363 | 2.34e-16 | 80.1 |
MS.gene033695.t1 | AT5G22660 | 25.926 | 378 | 187 | 13 | 18 | 337 | 13 | 355 | 3.68e-16 | 79.7 |
MS.gene033695.t1 | AT1G13780 | 29.528 | 254 | 135 | 12 | 10 | 250 | 2 | 224 | 4.91e-16 | 78.6 |
MS.gene033695.t1 | AT3G58880 | 26.562 | 384 | 197 | 13 | 17 | 343 | 2 | 357 | 5.15e-16 | 79.3 |
MS.gene033695.t1 | AT3G44060 | 31.754 | 211 | 122 | 4 | 20 | 230 | 1 | 189 | 7.97e-16 | 79.0 |
MS.gene033695.t1 | AT1G13780 | 29.528 | 254 | 135 | 12 | 10 | 250 | 2 | 224 | 8.50e-16 | 79.0 |
MS.gene033695.t1 | AT5G22720 | 28.319 | 226 | 132 | 6 | 18 | 242 | 23 | 219 | 9.83e-16 | 78.6 |
MS.gene033695.t1 | AT3G42770 | 30.942 | 223 | 124 | 6 | 20 | 232 | 1 | 203 | 1.19e-15 | 78.6 |
MS.gene033695.t1 | AT3G59190 | 26.562 | 384 | 188 | 14 | 18 | 335 | 12 | 367 | 1.41e-15 | 78.2 |
MS.gene033695.t1 | AT5G22660 | 30.698 | 215 | 109 | 7 | 18 | 227 | 13 | 192 | 2.38e-15 | 76.3 |
MS.gene033695.t1 | AT4G14096 | 26.776 | 366 | 192 | 13 | 18 | 335 | 8 | 345 | 3.57e-15 | 77.0 |
MS.gene033695.t1 | AT4G14096 | 26.776 | 366 | 192 | 13 | 18 | 335 | 8 | 345 | 3.57e-15 | 77.0 |
MS.gene033695.t1 | AT1G66290 | 26.065 | 399 | 195 | 16 | 2 | 337 | 5 | 366 | 3.89e-15 | 76.6 |
MS.gene033695.t1 | AT1G78760 | 30.337 | 267 | 126 | 13 | 4 | 260 | 8 | 224 | 7.77e-15 | 75.9 |
MS.gene033695.t1 | AT3G59210 | 30.415 | 217 | 125 | 6 | 18 | 231 | 7 | 200 | 8.89e-15 | 75.9 |
MS.gene033695.t1 | AT3G59210 | 30.415 | 217 | 125 | 6 | 18 | 231 | 7 | 200 | 8.89e-15 | 75.9 |
MS.gene033695.t1 | AT3G59210 | 30.415 | 217 | 125 | 6 | 18 | 231 | 7 | 200 | 8.89e-15 | 75.9 |
MS.gene033695.t1 | AT3G59210 | 30.415 | 217 | 125 | 6 | 18 | 231 | 7 | 200 | 8.89e-15 | 75.9 |
MS.gene033695.t1 | AT3G59210 | 30.415 | 217 | 125 | 6 | 18 | 231 | 7 | 200 | 8.89e-15 | 75.9 |
MS.gene033695.t1 | AT4G26350 | 27.586 | 232 | 134 | 7 | 17 | 246 | 1 | 200 | 1.18e-14 | 75.1 |
MS.gene033695.t1 | AT5G53840 | 27.213 | 305 | 178 | 10 | 18 | 313 | 18 | 287 | 1.27e-14 | 75.1 |
MS.gene033695.t1 | AT4G13965 | 31.308 | 214 | 107 | 6 | 18 | 226 | 10 | 188 | 2.06e-14 | 74.3 |
MS.gene033695.t1 | AT5G41630 | 31.004 | 229 | 136 | 8 | 18 | 241 | 12 | 223 | 3.05e-14 | 73.9 |
MS.gene033695.t1 | AT1G66300 | 23.810 | 399 | 204 | 17 | 2 | 335 | 5 | 368 | 3.50e-14 | 73.9 |
MS.gene033695.t1 | AT5G22700 | 26.331 | 338 | 195 | 11 | 18 | 337 | 43 | 344 | 6.74e-14 | 73.2 |
MS.gene033695.t1 | AT5G44950 | 30.000 | 210 | 120 | 7 | 18 | 227 | 4 | 186 | 6.78e-14 | 73.2 |
MS.gene033695.t1 | AT1G66320 | 24.259 | 371 | 187 | 14 | 23 | 335 | 35 | 369 | 7.34e-14 | 72.8 |
MS.gene033695.t1 | AT3G58900 | 25.065 | 383 | 196 | 15 | 17 | 335 | 1 | 356 | 9.30e-14 | 72.8 |
MS.gene033695.t1 | AT5G56440 | 30.047 | 213 | 113 | 4 | 17 | 224 | 1 | 182 | 9.62e-14 | 72.4 |
MS.gene033695.t1 | AT5G41840 | 29.130 | 230 | 133 | 7 | 18 | 237 | 14 | 223 | 1.27e-13 | 72.4 |
MS.gene033695.t1 | AT5G25850 | 29.004 | 231 | 123 | 9 | 1 | 226 | 2 | 196 | 1.30e-13 | 72.4 |
MS.gene033695.t1 | AT3G59160 | 29.741 | 232 | 115 | 7 | 18 | 224 | 13 | 221 | 1.32e-13 | 72.0 |
MS.gene033695.t1 | AT5G22610 | 25.287 | 348 | 208 | 10 | 18 | 337 | 18 | 341 | 1.83e-13 | 71.6 |
MS.gene033695.t1 | AT3G44810 | 32.701 | 211 | 117 | 9 | 20 | 226 | 9 | 198 | 2.15e-13 | 71.6 |
MS.gene033695.t1 | AT5G22670 | 32.701 | 211 | 108 | 7 | 18 | 226 | 11 | 189 | 2.62e-13 | 71.2 |
MS.gene033695.t1 | AT5G56370 | 25.429 | 350 | 207 | 11 | 17 | 342 | 1 | 320 | 3.03e-13 | 70.5 |
MS.gene033695.t1 | AT3G51530 | 29.870 | 231 | 126 | 9 | 9 | 237 | 21 | 217 | 4.86e-13 | 70.5 |
MS.gene033695.t1 | AT5G22700 | 29.907 | 214 | 116 | 6 | 18 | 229 | 6 | 187 | 5.32e-13 | 70.1 |
MS.gene033695.t1 | AT5G22700 | 29.907 | 214 | 116 | 6 | 18 | 229 | 6 | 187 | 5.32e-13 | 70.1 |
MS.gene033695.t1 | AT5G22700 | 29.907 | 214 | 116 | 6 | 18 | 229 | 6 | 187 | 5.32e-13 | 70.1 |
MS.gene033695.t1 | AT5G22700 | 29.907 | 214 | 116 | 6 | 18 | 229 | 6 | 187 | 5.32e-13 | 70.1 |
MS.gene033695.t1 | AT5G22700 | 29.907 | 214 | 116 | 6 | 18 | 229 | 43 | 224 | 5.40e-13 | 70.5 |
MS.gene033695.t1 | AT1G66310 | 22.912 | 419 | 216 | 11 | 5 | 365 | 6 | 375 | 6.02e-13 | 70.1 |
MS.gene033695.t1 | AT5G53640 | 27.642 | 246 | 124 | 9 | 4 | 236 | 3 | 207 | 6.20e-13 | 68.2 |
MS.gene033695.t1 | AT5G56410 | 30.275 | 218 | 129 | 5 | 17 | 226 | 1 | 203 | 7.68e-13 | 70.1 |
MS.gene033695.t1 | AT4G10400 | 31.250 | 224 | 113 | 9 | 17 | 233 | 1 | 190 | 7.77e-13 | 69.7 |
MS.gene033695.t1 | AT4G10400 | 31.250 | 224 | 113 | 9 | 17 | 233 | 1 | 190 | 7.77e-13 | 69.7 |
MS.gene033695.t1 | AT4G10400 | 31.250 | 224 | 113 | 9 | 17 | 233 | 1 | 190 | 7.77e-13 | 69.7 |
MS.gene033695.t1 | AT1G48400 | 32.381 | 210 | 115 | 7 | 18 | 224 | 10 | 195 | 7.95e-13 | 70.1 |
MS.gene033695.t1 | AT1G48400 | 32.381 | 210 | 115 | 7 | 18 | 224 | 10 | 195 | 9.11e-13 | 69.7 |
MS.gene033695.t1 | AT2G04230 | 31.925 | 213 | 116 | 8 | 18 | 226 | 13 | 200 | 1.10e-12 | 69.3 |
MS.gene033695.t1 | AT5G60610 | 29.524 | 210 | 113 | 6 | 17 | 224 | 1 | 177 | 1.14e-12 | 68.9 |
MS.gene033695.t1 | AT5G60610 | 29.524 | 210 | 113 | 6 | 17 | 224 | 1 | 177 | 1.14e-12 | 68.9 |
MS.gene033695.t1 | AT3G58930 | 23.737 | 396 | 195 | 17 | 17 | 335 | 1 | 366 | 1.25e-12 | 69.3 |
MS.gene033695.t1 | AT3G58930 | 23.737 | 396 | 195 | 17 | 17 | 335 | 1 | 366 | 1.25e-12 | 69.3 |
MS.gene033695.t1 | AT3G58930 | 23.737 | 396 | 195 | 17 | 17 | 335 | 1 | 366 | 1.25e-12 | 69.3 |
MS.gene033695.t1 | AT3G59170 | 26.290 | 407 | 184 | 15 | 18 | 335 | 7 | 386 | 1.37e-12 | 68.9 |
MS.gene033695.t1 | AT5G56370 | 25.507 | 345 | 203 | 11 | 17 | 337 | 1 | 315 | 1.54e-12 | 68.9 |
MS.gene033695.t1 | AT5G56370 | 25.507 | 345 | 203 | 11 | 17 | 337 | 1 | 315 | 1.54e-12 | 68.9 |
MS.gene033695.t1 | AT2G29910 | 28.862 | 246 | 128 | 8 | 18 | 256 | 5 | 210 | 1.90e-12 | 68.2 |
MS.gene033695.t1 | AT2G29910 | 28.862 | 246 | 128 | 8 | 18 | 256 | 5 | 210 | 1.90e-12 | 68.2 |
MS.gene033695.t1 | AT2G29910 | 28.862 | 246 | 128 | 8 | 18 | 256 | 5 | 210 | 1.90e-12 | 68.2 |
MS.gene033695.t1 | AT2G29910 | 28.862 | 246 | 128 | 8 | 18 | 256 | 5 | 210 | 1.90e-12 | 68.2 |
MS.gene033695.t1 | AT1G78840 | 25.469 | 373 | 178 | 15 | 23 | 338 | 11 | 340 | 2.03e-12 | 68.6 |
MS.gene033695.t1 | AT1G78840 | 25.469 | 373 | 178 | 15 | 23 | 338 | 11 | 340 | 2.03e-12 | 68.6 |
MS.gene033695.t1 | AT2G29910 | 28.862 | 246 | 128 | 8 | 18 | 256 | 29 | 234 | 2.18e-12 | 68.2 |
MS.gene033695.t1 | AT2G29910 | 28.862 | 246 | 128 | 8 | 18 | 256 | 5 | 210 | 2.19e-12 | 67.8 |
MS.gene033695.t1 | AT2G29910 | 28.862 | 246 | 128 | 8 | 18 | 256 | 5 | 210 | 2.19e-12 | 67.8 |
MS.gene033695.t1 | AT5G18780 | 26.695 | 236 | 139 | 6 | 18 | 251 | 11 | 214 | 4.99e-12 | 67.0 |
MS.gene033695.t1 | AT5G18780 | 26.695 | 236 | 139 | 6 | 18 | 251 | 11 | 214 | 4.99e-12 | 67.0 |
MS.gene033695.t1 | AT4G27050 | 30.734 | 218 | 122 | 9 | 17 | 224 | 3 | 201 | 5.27e-12 | 67.4 |
MS.gene033695.t1 | AT4G27050 | 30.734 | 218 | 122 | 9 | 17 | 224 | 3 | 201 | 5.27e-12 | 67.4 |
MS.gene033695.t1 | AT4G27050 | 30.734 | 218 | 122 | 9 | 17 | 224 | 3 | 201 | 5.27e-12 | 67.4 |
MS.gene033695.t1 | AT4G27050 | 30.734 | 218 | 122 | 9 | 17 | 224 | 3 | 201 | 5.27e-12 | 67.4 |
MS.gene033695.t1 | AT4G27050 | 30.734 | 218 | 122 | 9 | 17 | 224 | 3 | 201 | 5.27e-12 | 67.4 |
MS.gene033695.t1 | AT3G58900 | 29.259 | 270 | 146 | 11 | 17 | 281 | 1 | 230 | 5.49e-12 | 66.6 |
MS.gene033695.t1 | AT5G18780 | 26.695 | 236 | 139 | 6 | 18 | 251 | 11 | 214 | 6.48e-12 | 67.0 |
MS.gene033695.t1 | AT5G18780 | 26.695 | 236 | 139 | 6 | 18 | 251 | 11 | 214 | 6.48e-12 | 67.0 |
MS.gene033695.t1 | AT3G58900 | 29.259 | 270 | 146 | 11 | 17 | 281 | 1 | 230 | 6.96e-12 | 66.2 |
MS.gene033695.t1 | AT3G58900 | 29.259 | 270 | 146 | 11 | 17 | 281 | 1 | 230 | 6.96e-12 | 66.2 |
MS.gene033695.t1 | AT1G80470 | 29.204 | 226 | 115 | 9 | 18 | 234 | 15 | 204 | 7.26e-12 | 67.0 |
MS.gene033695.t1 | AT3G58960 | 24.869 | 382 | 191 | 16 | 17 | 335 | 1 | 349 | 7.90e-12 | 66.6 |
MS.gene033695.t1 | AT4G00320 | 24.378 | 402 | 208 | 16 | 18 | 354 | 13 | 383 | 1.04e-11 | 66.6 |
MS.gene033695.t1 | AT5G56820 | 25.434 | 346 | 197 | 12 | 18 | 337 | 15 | 325 | 1.15e-11 | 66.2 |
MS.gene033695.t1 | AT4G09920 | 28.750 | 240 | 131 | 8 | 17 | 249 | 1 | 207 | 1.15e-11 | 65.1 |
MS.gene033695.t1 | AT4G09920 | 28.750 | 240 | 131 | 8 | 17 | 249 | 1 | 207 | 1.15e-11 | 65.1 |
MS.gene033695.t1 | AT4G09920 | 28.750 | 240 | 131 | 8 | 17 | 249 | 1 | 207 | 1.15e-11 | 65.1 |
MS.gene033695.t1 | AT4G09920 | 30.275 | 218 | 112 | 8 | 17 | 227 | 1 | 185 | 1.17e-11 | 65.5 |
MS.gene033695.t1 | AT4G09920 | 30.275 | 218 | 112 | 8 | 17 | 227 | 1 | 185 | 1.17e-11 | 65.5 |
MS.gene033695.t1 | AT5G41830 | 28.163 | 245 | 142 | 10 | 18 | 252 | 13 | 233 | 1.81e-11 | 65.9 |
MS.gene033695.t1 | AT1G60400 | 24.029 | 412 | 219 | 15 | 16 | 364 | 12 | 392 | 2.72e-11 | 65.1 |
MS.gene033695.t1 | AT5G56560 | 28.302 | 212 | 119 | 7 | 19 | 228 | 6 | 186 | 2.99e-11 | 64.7 |
MS.gene033695.t1 | AT1G55660 | 30.476 | 210 | 120 | 7 | 17 | 224 | 52 | 237 | 3.21e-11 | 64.3 |
MS.gene033695.t1 | AT5G56560 | 26.724 | 232 | 137 | 7 | 19 | 248 | 6 | 206 | 3.32e-11 | 65.1 |
MS.gene033695.t1 | AT3G59000 | 28.807 | 243 | 122 | 10 | 17 | 232 | 1 | 219 | 3.66e-11 | 64.3 |
MS.gene033695.t1 | AT3G44080 | 33.333 | 171 | 91 | 6 | 10 | 176 | 2 | 153 | 3.77e-11 | 64.3 |
MS.gene033695.t1 | AT5G56420 | 29.060 | 234 | 139 | 6 | 18 | 251 | 6 | 212 | 4.62e-11 | 64.3 |
MS.gene033695.t1 | AT5G56420 | 29.060 | 234 | 139 | 6 | 18 | 251 | 6 | 212 | 4.62e-11 | 64.3 |
MS.gene033695.t1 | AT5G56420 | 29.060 | 234 | 139 | 6 | 18 | 251 | 6 | 212 | 4.62e-11 | 64.3 |
MS.gene033695.t1 | AT1G55660 | 30.476 | 210 | 120 | 7 | 17 | 224 | 52 | 237 | 5.08e-11 | 64.3 |
MS.gene033695.t1 | AT3G49020 | 30.476 | 210 | 115 | 7 | 18 | 226 | 22 | 201 | 7.01e-11 | 63.9 |
MS.gene033695.t1 | AT4G00315 | 27.962 | 211 | 128 | 6 | 17 | 226 | 1 | 188 | 8.91e-11 | 63.5 |
MS.gene033695.t1 | AT3G49040 | 29.907 | 214 | 115 | 8 | 18 | 226 | 17 | 200 | 9.37e-11 | 62.8 |
Find 80 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGAATACCAACAGGTAATT+TGG | 0.204502 | 7.3:+24701062 | None:intergenic |
ATATGTGCACTAATCAATTT+TGG | 0.234592 | 7.3:+24700775 | None:intergenic |
ATTAGATTTGGATTTGGATT+TGG | 0.281235 | 7.3:-24700973 | MS.gene033695:CDS |
TGAGTCTATATACTCAATTT+TGG | 0.296206 | 7.3:-24701289 | MS.gene033695:CDS |
GATTCTTCTTCTATTAGATT+TGG | 0.302275 | 7.3:-24700985 | MS.gene033695:CDS |
GCTTGTGGCAACTGCCTCTT+TGG | 0.307775 | 7.3:+24701413 | None:intergenic |
TTTAGTCTCGAAATTGAATA+TGG | 0.325057 | 7.3:-24701228 | MS.gene033695:CDS |
TCTTCTATTAGATTTGGATT+TGG | 0.328909 | 7.3:-24700979 | MS.gene033695:CDS |
ATCACTCAATGTCCTTCATT+TGG | 0.338044 | 7.3:-24700944 | MS.gene033695:CDS |
GATGATGATGATGAAGAATA+TGG | 0.354091 | 7.3:-24701090 | MS.gene033695:CDS |
TATGATCTAGCCTTACGTTT+TGG | 0.357736 | 7.3:-24701201 | MS.gene033695:CDS |
ACTCGTAGATGCTCAAGATT+TGG | 0.374943 | 7.3:+24700868 | None:intergenic |
GGATAAGATCAGCAGTTTAC+CGG | 0.376662 | 7.3:-24701472 | MS.gene033695:CDS |
GATTGGAGCTTTACGATGAT+TGG | 0.378888 | 7.3:-24700297 | MS.gene033695:CDS |
CGGGACAAATTATGAAAGAT+AGG | 0.382552 | 7.3:+24700319 | None:intergenic |
AAAAGATCACAAATTCTTCC+AGG | 0.388189 | 7.3:-24700665 | MS.gene033695:intron |
AGTTCGAGATGTTGAAGCTT+AGG | 0.389430 | 7.3:+24700244 | None:intergenic |
TTGGTCTCTCGCGACGCCGC+TGG | 0.397259 | 7.3:-24701270 | MS.gene033695:CDS |
CAAAGAGATGGACTCATCTC+TGG | 0.406201 | 7.3:-24701383 | MS.gene033695:CDS |
AGAATACCAACAGGTAATTT+GGG | 0.415078 | 7.3:+24701063 | None:intergenic |
CTTTCATAATTTGTCCCGAT+TGG | 0.417482 | 7.3:-24700314 | MS.gene033695:CDS |
GCATTCACAACGTCAACAAA+TGG | 0.428875 | 7.3:-24701179 | MS.gene033695:CDS |
GTGGCAACTGCCTCTTTGGT+AGG | 0.428995 | 7.3:+24701417 | None:intergenic |
ATTGGAGCTTTACGATGATT+GGG | 0.449702 | 7.3:-24700296 | MS.gene033695:CDS |
GTTCGAGATGTTGAAGCTTA+GGG | 0.452873 | 7.3:+24700245 | None:intergenic |
ATCAAGGTTCATCCATTGTA+CGG | 0.465478 | 7.3:-24699647 | MS.gene033695:CDS |
TCAACATCTCGAACTTTACA+AGG | 0.468919 | 7.3:-24700236 | MS.gene033695:intron |
CTTGAGCATCTACGAGTTGT+GGG | 0.478913 | 7.3:-24700862 | MS.gene033695:CDS |
ATCTTATCCACCGCTGGTGG+TGG | 0.483228 | 7.3:+24701486 | None:intergenic |
TGGCAACTGCCTCTTTGGTA+GGG | 0.485980 | 7.3:+24701418 | None:intergenic |
AGACTTGATTGCACAGCCAC+AGG | 0.489740 | 7.3:-24699605 | MS.gene033695:CDS |
GTTGAAGCTTAGGGCAGTGT+TGG | 0.492971 | 7.3:+24700254 | None:intergenic |
AATCATCGTAAAGCTCCAAT+CGG | 0.505933 | 7.3:+24700299 | None:intergenic |
TTATCCACCGCTGGTGGTGG+TGG | 0.512107 | 7.3:+24701489 | None:intergenic |
TACCGGACGCGATTCTGAGC+GGG | 0.516154 | 7.3:-24701455 | MS.gene033695:CDS |
TCTTGAGCATCTACGAGTTG+TGG | 0.523909 | 7.3:-24700863 | MS.gene033695:CDS |
CAGGGCAGAGGCGTGTATGA+AGG | 0.527197 | 7.3:-24699586 | None:intergenic |
GCGGATCTACTTCCTCATCA+TGG | 0.529242 | 7.3:+24700830 | None:intergenic |
ACCGACGGTATCAACTTCTC+CGG | 0.535091 | 7.3:-24701354 | MS.gene033695:CDS |
AGATCACATCGTCCAAATGA+AGG | 0.536500 | 7.3:+24700932 | None:intergenic |
ATCATCGTAAAGCTCCAATC+GGG | 0.537395 | 7.3:+24700300 | None:intergenic |
CAAGGAACCAACCGAGGTCG+AGG | 0.544035 | 7.3:+24701019 | None:intergenic |
ATCCCGCTCAGAATCGCGTC+CGG | 0.546632 | 7.3:+24701453 | None:intergenic |
CTGCTGATCTTATCCACCGC+TGG | 0.548082 | 7.3:+24701480 | None:intergenic |
GTTGTGAATGCCAAAACGTA+AGG | 0.555391 | 7.3:+24701191 | None:intergenic |
ATTGCACAGCCACAGGGCAG+AGG | 0.558750 | 7.3:-24699598 | MS.gene033695:CDS |
CAAGCATTCTCTCAAAGAGA+TGG | 0.559752 | 7.3:-24701395 | MS.gene033695:CDS |
TCAAGGTTCATCCATTGTAC+GGG | 0.571360 | 7.3:-24699646 | MS.gene033695:CDS |
AAGAAGAAATGGGGCGACGG+AGG | 0.571428 | 7.3:-24701530 | None:intergenic |
GGAATACCCAAATTACCTGT+TGG | 0.572473 | 7.3:-24701069 | MS.gene033695:CDS |
GGGCAGTGTTGGAGCACTTG+CGG | 0.573680 | 7.3:+24700265 | None:intergenic |
TTAAACTCTTGAATGAATAG+CGG | 0.574225 | 7.3:+24700811 | None:intergenic |
AACAAGAAGAAATGGGGCGA+CGG | 0.574256 | 7.3:-24701533 | None:intergenic |
GTACATGTGAGAATACCAAC+AGG | 0.575641 | 7.3:+24701054 | None:intergenic |
AAATTAGATAGTGCTTTCAA+CGG | 0.589096 | 7.3:+24700724 | None:intergenic |
GCTTTACGATGATTGGGAGG+TGG | 0.590171 | 7.3:-24700290 | MS.gene033695:CDS |
GTCTCGTCTCCCTACCAAAG+AGG | 0.593043 | 7.3:-24701427 | MS.gene033695:CDS |
TTGTAAGCCTCGACCTCGGT+TGG | 0.593890 | 7.3:-24701026 | MS.gene033695:CDS |
AAATGAAGGACATTGAGTGA+TGG | 0.599122 | 7.3:+24700946 | None:intergenic |
TCTCTTTGAGAGAATGCTTG+TGG | 0.599916 | 7.3:+24701398 | None:intergenic |
AGCACCACCACCACCAGCGG+TGG | 0.617768 | 7.3:-24701493 | MS.gene033695:CDS |
GACTTGATTGCACAGCCACA+GGG | 0.622709 | 7.3:-24699604 | MS.gene033695:CDS |
GTTATTCACTGTGATGATGC+CGG | 0.628120 | 7.3:+24701335 | None:intergenic |
CTAATAGAAGAAGAATCGAA+AGG | 0.629105 | 7.3:+24700991 | None:intergenic |
AGATAGGAATATCATCGTAA+CGG | 0.630870 | 7.3:+24700335 | None:intergenic |
AAGAATCGAAAGGCTTCACA+AGG | 0.633081 | 7.3:+24701001 | None:intergenic |
AGAAGCACCACCACCACCAG+CGG | 0.633130 | 7.3:-24701496 | MS.gene033695:CDS |
GCATACATGTGCCCGTACAA+TGG | 0.635239 | 7.3:+24699635 | None:intergenic |
CAAGGCTATTCACACTGACG+TGG | 0.636781 | 7.3:+24701115 | None:intergenic |
GCCGGAGAAGTTGATACCGT+CGG | 0.639653 | 7.3:+24701353 | None:intergenic |
CTGATCTTATCCACCGCTGG+TGG | 0.645294 | 7.3:+24701483 | None:intergenic |
TATCTAATTTGAAGTCTCTG+AGG | 0.648071 | 7.3:-24700711 | MS.gene033695:CDS |
GGAGCTTTACGATGATTGGG+AGG | 0.649670 | 7.3:-24700293 | MS.gene033695:CDS |
CATCTCTGGAAATTTACCGA+CGG | 0.653189 | 7.3:-24701369 | MS.gene033695:CDS |
ATCGATGAAATGAGAGCCAG+CGG | 0.657046 | 7.3:+24701254 | None:intergenic |
GGGTATATACTTCCATGATG+AGG | 0.659733 | 7.3:-24700842 | MS.gene033695:CDS |
GCTTCACAAGGAACCAACCG+AGG | 0.686050 | 7.3:+24701013 | None:intergenic |
TCATACACGCCTCTGCCCTG+TGG | 0.686102 | 7.3:+24699589 | None:intergenic |
ACACTTGTAAGCCTCGACCT+CGG | 0.696576 | 7.3:-24701030 | MS.gene033695:CDS |
TTACCGGACGCGATTCTGAG+CGG | 0.700251 | 7.3:-24701456 | MS.gene033695:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTATATAAATAAAAAGTT+AGG | + | chr7.3:24701407-24701426 | None:intergenic | 10.0% |
!! | TGTATATAAATAAAAAGTTA+GGG | + | chr7.3:24701406-24701425 | None:intergenic | 10.0% |
!! | AAAAGAAAAAAGAAAAAACA+TGG | + | chr7.3:24700692-24700711 | None:intergenic | 15.0% |
!! | GTTATCAATAAAATAAAAGT+CGG | + | chr7.3:24701218-24701237 | None:intergenic | 15.0% |
!! | AAAAAGATGATGAAGAAAAT+TGG | - | chr7.3:24700983-24701002 | MS.gene033695:CDS | 20.0% |
!! | AAAAGATGATGAAGAAAATT+GGG | - | chr7.3:24700984-24701003 | MS.gene033695:CDS | 20.0% |
!! | ATAAATAAATAAAACGAACC+TGG | + | chr7.3:24700467-24700486 | None:intergenic | 20.0% |
!! | TAGTTATGTGCAATATTAAT+AGG | - | chr7.3:24700960-24700979 | MS.gene033695:CDS | 20.0% |
!! | TATAATCAAATTGGAGAAAA+CGG | + | chr7.3:24700595-24700614 | None:intergenic | 20.0% |
!! | TGTAATCAATTGTGTTATAT+TGG | + | chr7.3:24700544-24700563 | None:intergenic | 20.0% |
!!! | AGCAAAATATATTTTGATGA+AGG | - | chr7.3:24701098-24701117 | MS.gene033695:CDS | 20.0% |
!!! | GACAATTTTCTTTTGATTTT+AGG | + | chr7.3:24701168-24701187 | None:intergenic | 20.0% |
! | AAATTAGATAGTGCTTTCAA+CGG | + | chr7.3:24700390-24700409 | None:intergenic | 25.0% |
! | AAGAAAAGATAAACCGAATA+TGG | + | chr7.3:24700925-24700944 | None:intergenic | 25.0% |
! | AGACAGTATTATATAGATTG+AGG | + | chr7.3:24700517-24700536 | None:intergenic | 25.0% |
! | ATCTAATTGAAGTCATAAAC+AGG | + | chr7.3:24701446-24701465 | None:intergenic | 25.0% |
! | ATTAGATTTGGATTTGGATT+TGG | - | chr7.3:24700138-24700157 | MS.gene033695:intron | 25.0% |
! | ATTGCACATAACTAAAGTTA+AGG | + | chr7.3:24700954-24700973 | None:intergenic | 25.0% |
! | GATTCTTCTTCTATTAGATT+TGG | - | chr7.3:24700126-24700145 | MS.gene033695:intron | 25.0% |
! | TAAGAAGTAAGAACCATATT+CGG | - | chr7.3:24700909-24700928 | MS.gene033695:CDS | 25.0% |
! | TCTTCTATTAGATTTGGATT+TGG | - | chr7.3:24700132-24700151 | MS.gene033695:intron | 25.0% |
! | TTAAACTCTTGAATGAATAG+CGG | + | chr7.3:24700303-24700322 | None:intergenic | 25.0% |
! | TTATGACTTCAATTAGATCA+AGG | - | chr7.3:24701448-24701467 | MS.gene033695:CDS | 25.0% |
! | TTTAGTCTCGAAATTGAATA+TGG | - | chr7.3:24699883-24699902 | MS.gene033695:intron | 25.0% |
!! | ATATGTGCACTAATCAATTT+TGG | + | chr7.3:24700339-24700358 | None:intergenic | 25.0% |
!! | TGAGTCTATATACTCAATTT+TGG | - | chr7.3:24699822-24699841 | MS.gene033695:intron | 25.0% |
!! | TTTTACAAATCATGGAAATC+TGG | - | chr7.3:24701127-24701146 | MS.gene033695:CDS | 25.0% |
!!! | CTGTTTTATTAGCTTCTATT+TGG | - | chr7.3:24701277-24701296 | MS.gene033695:CDS | 25.0% |
AAAAGATCACAAATTCTTCC+AGG | - | chr7.3:24700446-24700465 | MS.gene033695:intron | 30.0% | |
AAAGACACACTATCAAATTG+GGG | + | chr7.3:24700726-24700745 | None:intergenic | 30.0% | |
AGAATACCAACAGGTAATTT+GGG | + | chr7.3:24700051-24700070 | None:intergenic | 30.0% | |
AGATAGGAATATCATCGTAA+CGG | + | chr7.3:24700779-24700798 | None:intergenic | 30.0% | |
CTAATAGAAGAAGAATCGAA+AGG | + | chr7.3:24700123-24700142 | None:intergenic | 30.0% | |
GAAAGACACACTATCAAATT+GGG | + | chr7.3:24700727-24700746 | None:intergenic | 30.0% | |
GGACTGACATATAATCAAAT+TGG | + | chr7.3:24700604-24700623 | None:intergenic | 30.0% | |
! | GATGATGATGATGAAGAATA+TGG | - | chr7.3:24700021-24700040 | MS.gene033695:intron | 30.0% |
! | GGCAAGAATTTTACAAATCA+TGG | - | chr7.3:24701119-24701138 | MS.gene033695:CDS | 30.0% |
! | TATCTAATTTGAAGTCTCTG+AGG | - | chr7.3:24700400-24700419 | MS.gene033695:intron | 30.0% |
!!! | GATTTTTTGTTGCTTTTAGC+TGG | - | chr7.3:24700216-24700235 | MS.gene033695:intron | 30.0% |
AAATGAAGGACATTGAGTGA+TGG | + | chr7.3:24700168-24700187 | None:intergenic | 35.0% | |
AAGCTAATAAAACAGCAAGC+AGG | + | chr7.3:24701272-24701291 | None:intergenic | 35.0% | |
AATCATCGTAAAGCTCCAAT+CGG | + | chr7.3:24700815-24700834 | None:intergenic | 35.0% | |
AGATGATGAAGAAAATTGGG+TGG | - | chr7.3:24700987-24701006 | MS.gene033695:CDS | 35.0% | |
ATCAAGGTTCATCCATTGTA+CGG | - | chr7.3:24701464-24701483 | MS.gene033695:CDS | 35.0% | |
ATCACTCAATGTCCTTCATT+TGG | - | chr7.3:24700167-24700186 | MS.gene033695:intron | 35.0% | |
ATTGGAGCTTTACGATGATT+GGG | - | chr7.3:24700815-24700834 | MS.gene033695:CDS | 35.0% | |
CATGAATAGTGCAAGTTCTA+AGG | + | chr7.3:24701047-24701066 | None:intergenic | 35.0% | |
CGAAAGACACACTATCAAAT+TGG | + | chr7.3:24700728-24700747 | None:intergenic | 35.0% | |
CGGGACAAATTATGAAAGAT+AGG | + | chr7.3:24700795-24700814 | None:intergenic | 35.0% | |
CTTCATCATCATCATCATCA+AGG | + | chr7.3:24700017-24700036 | None:intergenic | 35.0% | |
GAGAATACCAACAGGTAATT+TGG | + | chr7.3:24700052-24700071 | None:intergenic | 35.0% | |
TCAACATCTCGAACTTTACA+AGG | - | chr7.3:24700875-24700894 | MS.gene033695:CDS | 35.0% | |
TGTGTCTTTCGACATAATTC+AGG | - | chr7.3:24700737-24700756 | MS.gene033695:CDS | 35.0% | |
! | CATGGAAATCTGGAACAAAT+GGG | - | chr7.3:24701137-24701156 | MS.gene033695:CDS | 35.0% |
! | CTTTCATAATTTGTCCCGAT+TGG | - | chr7.3:24700797-24700816 | MS.gene033695:CDS | 35.0% |
! | TCATGGAAATCTGGAACAAA+TGG | - | chr7.3:24701136-24701155 | MS.gene033695:CDS | 35.0% |
! | TGCACTATTCATGACTTTTC+AGG | - | chr7.3:24701054-24701073 | MS.gene033695:CDS | 35.0% |
!! | AAGTTCTAAGGTATGATGAC+AGG | + | chr7.3:24701035-24701054 | None:intergenic | 35.0% |
!!! | TATGATCTAGCCTTACGTTT+TGG | - | chr7.3:24699910-24699929 | MS.gene033695:intron | 35.0% |
AAAATTGTCCACTTGCCCAA+AGG | - | chr7.3:24701179-24701198 | MS.gene033695:CDS | 40.0% | |
AAGAATCGAAAGGCTTCACA+AGG | + | chr7.3:24700113-24700132 | None:intergenic | 40.0% | |
ACTCGTAGATGCTCAAGATT+TGG | + | chr7.3:24700246-24700265 | None:intergenic | 40.0% | |
AGATCACATCGTCCAAATGA+AGG | + | chr7.3:24700182-24700201 | None:intergenic | 40.0% | |
AGTTCGAGATGTTGAAGCTT+AGG | + | chr7.3:24700870-24700889 | None:intergenic | 40.0% | |
ATCATCGTAAAGCTCCAATC+GGG | + | chr7.3:24700814-24700833 | None:intergenic | 40.0% | |
CAAGCATTCTCTCAAAGAGA+TGG | - | chr7.3:24699716-24699735 | MS.gene033695:intron | 40.0% | |
GATTGGAGCTTTACGATGAT+TGG | - | chr7.3:24700814-24700833 | MS.gene033695:CDS | 40.0% | |
GCATTCACAACGTCAACAAA+TGG | - | chr7.3:24699932-24699951 | MS.gene033695:intron | 40.0% | |
GGAATACCCAAATTACCTGT+TGG | - | chr7.3:24700042-24700061 | MS.gene033695:intron | 40.0% | |
GGATAAGATCAGCAGTTTAC+CGG | - | chr7.3:24699639-24699658 | MS.gene033695:CDS | 40.0% | |
GGGTATATACTTCCATGATG+AGG | - | chr7.3:24700269-24700288 | MS.gene033695:CDS | 40.0% | |
GTACATGTGAGAATACCAAC+AGG | + | chr7.3:24700060-24700079 | None:intergenic | 40.0% | |
GTTCGAGATGTTGAAGCTTA+GGG | + | chr7.3:24700869-24700888 | None:intergenic | 40.0% | |
GTTGTGAATGCCAAAACGTA+AGG | + | chr7.3:24699923-24699942 | None:intergenic | 40.0% | |
TCAAGGTTCATCCATTGTAC+GGG | - | chr7.3:24701465-24701484 | MS.gene033695:CDS | 40.0% | |
! | CATCTCTGGAAATTTACCGA+CGG | - | chr7.3:24699742-24699761 | MS.gene033695:intron | 40.0% |
! | GTTATTCACTGTGATGATGC+CGG | + | chr7.3:24699779-24699798 | None:intergenic | 40.0% |
! | TCTCTTTGAGAGAATGCTTG+TGG | + | chr7.3:24699716-24699735 | None:intergenic | 40.0% |
ATCGATGAAATGAGAGCCAG+CGG | + | chr7.3:24699860-24699879 | None:intergenic | 45.0% | |
CTAACATAAGCTCGCTGTGT+AGG | + | chr7.3:24701080-24701099 | None:intergenic | 45.0% | |
CTTGAGCATCTACGAGTTGT+GGG | - | chr7.3:24700249-24700268 | MS.gene033695:CDS | 45.0% | |
GCGTATGGTGGTCAATACAA+TGG | + | chr7.3:24700625-24700644 | None:intergenic | 45.0% | |
TAAAAGTCGGCATGTTGCAG+AGG | + | chr7.3:24701205-24701224 | None:intergenic | 45.0% | |
TAGTCTCGCTGCACTAATGA+AGG | - | chr7.3:24701343-24701362 | MS.gene033695:CDS | 45.0% | |
TATTGACCACCATACGCTGA+AGG | - | chr7.3:24700628-24700647 | MS.gene033695:intron | 45.0% | |
TCTTGAGCATCTACGAGTTG+TGG | - | chr7.3:24700248-24700267 | MS.gene033695:CDS | 45.0% | |
! | AGGTATGATGACAGGCATTG+AGG | + | chr7.3:24701027-24701046 | None:intergenic | 45.0% |
! | CAAAGAGATGGACTCATCTC+TGG | - | chr7.3:24699728-24699747 | MS.gene033695:intron | 45.0% |
ACACTTGTAAGCCTCGACCT+CGG | - | chr7.3:24700081-24700100 | MS.gene033695:intron | 50.0% | |
ACCACCATACGCTGAAGGAA+TGG | - | chr7.3:24700633-24700652 | MS.gene033695:intron | 50.0% | |
ACCGACGGTATCAACTTCTC+CGG | - | chr7.3:24699757-24699776 | MS.gene033695:intron | 50.0% | |
AGACTTGATTGCACAGCCAC+AGG | - | chr7.3:24701506-24701525 | MS.gene033695:CDS | 50.0% | |
CAAGGCTATTCACACTGACG+TGG | + | chr7.3:24699999-24700018 | None:intergenic | 50.0% | |
CATACGCTGAAGGAATGGGA+TGG | - | chr7.3:24700638-24700657 | MS.gene033695:intron | 50.0% | |
CATCCCATTCCTTCAGCGTA+TGG | + | chr7.3:24700640-24700659 | None:intergenic | 50.0% | |
CCACCATACGCTGAAGGAAT+GGG | - | chr7.3:24700634-24700653 | MS.gene033695:intron | 50.0% | |
GACTTGATTGCACAGCCACA+GGG | - | chr7.3:24701507-24701526 | MS.gene033695:CDS | 50.0% | |
GCATACATGTGCCCGTACAA+TGG | + | chr7.3:24701479-24701498 | None:intergenic | 50.0% | |
GCGGATCTACTTCCTCATCA+TGG | + | chr7.3:24700284-24700303 | None:intergenic | 50.0% | |
GCTTTACGATGATTGGGAGG+TGG | - | chr7.3:24700821-24700840 | MS.gene033695:CDS | 50.0% | |
GGAGCTTTACGATGATTGGG+AGG | - | chr7.3:24700818-24700837 | MS.gene033695:CDS | 50.0% | |
GTTGAAGCTTAGGGCAGTGT+TGG | + | chr7.3:24700860-24700879 | None:intergenic | 50.0% | |
TGGCAACTGCCTCTTTGGTA+GGG | + | chr7.3:24699696-24699715 | None:intergenic | 50.0% | |
!! | AGGCATTGAGGAACAAGCTC+TGG | + | chr7.3:24701015-24701034 | None:intergenic | 50.0% |
ATCTTATCCACCGCTGGTGG+TGG | + | chr7.3:24699628-24699647 | None:intergenic | 55.0% | |
CCCATTCCTTCAGCGTATGG+TGG | + | chr7.3:24700637-24700656 | None:intergenic | 55.0% | |
CTGATCTTATCCACCGCTGG+TGG | + | chr7.3:24699631-24699650 | None:intergenic | 55.0% | |
CTGCTGATCTTATCCACCGC+TGG | + | chr7.3:24699634-24699653 | None:intergenic | 55.0% | |
GCTTCACAAGGAACCAACCG+AGG | + | chr7.3:24700101-24700120 | None:intergenic | 55.0% | |
GCTTGTGGCAACTGCCTCTT+TGG | + | chr7.3:24699701-24699720 | None:intergenic | 55.0% | |
GGCATGTTGCAGAGGCCTTT+GGG | + | chr7.3:24701197-24701216 | None:intergenic | 55.0% | |
GTCTCGTCTCCCTACCAAAG+AGG | - | chr7.3:24699684-24699703 | MS.gene033695:intron | 55.0% | |
GTGGCAACTGCCTCTTTGGT+AGG | + | chr7.3:24699697-24699716 | None:intergenic | 55.0% | |
TTACCGGACGCGATTCTGAG+CGG | - | chr7.3:24699655-24699674 | MS.gene033695:intron | 55.0% | |
TTGTAAGCCTCGACCTCGGT+TGG | - | chr7.3:24700085-24700104 | MS.gene033695:intron | 55.0% | |
!! | GCCGGAGAAGTTGATACCGT+CGG | + | chr7.3:24699761-24699780 | None:intergenic | 55.0% |
ATCCCGCTCAGAATCGCGTC+CGG | + | chr7.3:24699661-24699680 | None:intergenic | 60.0% | |
ATTGCACAGCCACAGGGCAG+AGG | - | chr7.3:24701513-24701532 | MS.gene033695:CDS | 60.0% | |
CAAGGAACCAACCGAGGTCG+AGG | + | chr7.3:24700095-24700114 | None:intergenic | 60.0% | |
CGGCATGTTGCAGAGGCCTT+TGG | + | chr7.3:24701198-24701217 | None:intergenic | 60.0% | |
TACCGGACGCGATTCTGAGC+GGG | - | chr7.3:24699656-24699675 | MS.gene033695:intron | 60.0% | |
TCATACACGCCTCTGCCCTG+TGG | + | chr7.3:24701525-24701544 | None:intergenic | 60.0% | |
TGCAGAGGCCTTTGGGCAAG+TGG | + | chr7.3:24701190-24701209 | None:intergenic | 60.0% | |
! | GGGCAGTGTTGGAGCACTTG+CGG | + | chr7.3:24700849-24700868 | None:intergenic | 60.0% |
!! | AGAAGCACCACCACCACCAG+CGG | - | chr7.3:24699615-24699634 | MS.gene033695:CDS | 60.0% |
!! | TTATCCACCGCTGGTGGTGG+TGG | + | chr7.3:24699625-24699644 | None:intergenic | 60.0% |
AGCACCACCACCACCAGCGG+TGG | - | chr7.3:24699618-24699637 | MS.gene033695:CDS | 70.0% | |
TTGGTCTCTCGCGACGCCGC+TGG | - | chr7.3:24699841-24699860 | MS.gene033695:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 24699589 | 24701544 | 24699589 | ID=MS.gene033695 |
chr7.3 | mRNA | 24699589 | 24701544 | 24699589 | ID=MS.gene033695.t1;Parent=MS.gene033695 |
chr7.3 | exon | 24700666 | 24701544 | 24700666 | ID=MS.gene033695.t1.exon1;Parent=MS.gene033695.t1 |
chr7.3 | CDS | 24700666 | 24701544 | 24700666 | ID=cds.MS.gene033695.t1;Parent=MS.gene033695.t1 |
chr7.3 | exon | 24700237 | 24700374 | 24700237 | ID=MS.gene033695.t1.exon2;Parent=MS.gene033695.t1 |
chr7.3 | CDS | 24700237 | 24700374 | 24700237 | ID=cds.MS.gene033695.t1;Parent=MS.gene033695.t1 |
chr7.3 | exon | 24699589 | 24699669 | 24699589 | ID=MS.gene033695.t1.exon3;Parent=MS.gene033695.t1 |
chr7.3 | CDS | 24699589 | 24699669 | 24699589 | ID=cds.MS.gene033695.t1;Parent=MS.gene033695.t1 |
Gene Sequence |
Protein sequence |