AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033695


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033695.t1 MTR_2g007450 52.802 339 150 6 1 339 1 329 7.16e-106 317
MS.gene033695.t1 MTR_7g083740 52.507 339 91 8 3 339 2 272 1.25e-96 292
MS.gene033695.t1 MTR_1g053025 50.309 324 135 8 17 339 1 299 2.38e-87 269
MS.gene033695.t1 MTR_3g026920 47.006 334 135 10 16 338 17 319 3.20e-76 241
MS.gene033695.t1 MTR_4g098590 46.541 318 141 8 20 337 1 289 1.16e-74 236
MS.gene033695.t1 MTR_2g007500 45.075 335 139 9 5 339 3 292 3.98e-71 225
MS.gene033695.t1 MTR_2g007400 41.972 355 162 12 5 353 3 319 2.19e-70 226
MS.gene033695.t1 MTR_3g107160 41.538 325 144 11 18 337 10 293 5.05e-65 211
MS.gene033695.t1 MTR_1g107385 41.088 331 165 7 18 346 32 334 5.59e-63 207
MS.gene033695.t1 MTR_5g083890 41.463 328 164 7 15 339 3 305 3.88e-60 202
MS.gene033695.t1 MTR_7g075820 38.810 353 172 11 15 363 3 315 2.90e-59 196
MS.gene033695.t1 MTR_2g005990 40.729 329 155 10 16 339 4 297 9.39e-59 195
MS.gene033695.t1 MTR_3g107100 40.867 323 148 9 18 337 11 293 1.98e-56 189
MS.gene033695.t1 MTR_2g007550 37.427 342 118 7 1 339 1 249 1.70e-55 185
MS.gene033695.t1 MTR_3g107120 41.071 336 139 11 18 337 9 301 5.18e-55 186
MS.gene033695.t1 MTR_2g008320 37.647 340 144 13 16 339 50 337 1.19e-48 170
MS.gene033695.t1 MTR_3g099830 38.182 330 134 9 16 339 10 275 2.86e-48 167
MS.gene033695.t1 MTR_2g008310 37.994 329 152 11 17 339 1 283 5.51e-48 167
MS.gene033695.t1 MTR_2g007360 38.485 330 132 8 16 341 10 272 1.99e-46 162
MS.gene033695.t1 MTR_2g007530 37.778 270 131 8 16 249 17 285 1.96e-40 145
MS.gene033695.t1 MTR_2g007530 53.846 78 28 2 266 342 197 267 7.66e-14 72.0
MS.gene033695.t1 MTR_7g007340 35.952 331 137 9 12 339 4 262 2.83e-37 138
MS.gene033695.t1 MTR_6g045333 31.627 332 180 10 17 339 60 353 4.57e-29 117
MS.gene033695.t1 MTR_7g115270 29.697 330 191 8 15 335 9 306 1.29e-28 115
MS.gene033695.t1 MTR_1g041245 30.357 336 172 11 15 339 8 292 6.14e-28 113
MS.gene033695.t1 MTR_7g075800 30.347 346 189 13 15 340 6 319 6.53e-28 115
MS.gene033695.t1 MTR_3g105060 30.154 325 171 9 15 334 11 284 2.74e-27 111
MS.gene033695.t1 MTR_8g085430 34.061 229 118 7 15 236 8 210 9.86e-27 108
MS.gene033695.t1 MTR_7g032380 29.141 326 161 10 15 339 8 264 1.37e-26 108
MS.gene033695.t1 MTR_7g007370 33.025 324 128 11 17 339 16 251 1.85e-26 108
MS.gene033695.t1 MTR_5g073420 31.751 337 168 15 8 335 1 284 3.23e-26 108
MS.gene033695.t1 MTR_3g082890 30.833 360 183 11 1 340 1 314 4.57e-24 103
MS.gene033695.t1 MTR_7g034115 31.085 341 162 14 15 339 8 291 1.86e-23 100
MS.gene033695.t1 MTR_3g082890 30.919 359 182 11 1 339 81 393 1.88e-23 101
MS.gene033695.t1 MTR_3g040700 30.816 331 160 15 17 337 42 313 2.62e-23 100
MS.gene033695.t1 MTR_1089s0010 28.125 352 201 10 17 363 7 311 4.22e-23 99.8
MS.gene033695.t1 MTR_7g026500 30.588 340 194 14 6 339 2 305 5.04e-23 99.8
MS.gene033695.t1 MTR_3g071850 29.940 334 183 10 17 339 23 316 8.02e-23 100
MS.gene033695.t1 MTR_7g098480 31.765 340 171 14 3 335 8 293 1.12e-22 99.4
MS.gene033695.t1 MTR_5g082930 53.398 103 45 2 20 120 17 118 1.78e-22 94.4
MS.gene033695.t1 MTR_7g098510 32.267 344 170 17 3 337 8 297 8.61e-22 95.9
MS.gene033695.t1 MTR_7g032370 28.391 317 156 10 33 339 5 260 1.20e-21 95.1
MS.gene033695.t1 MTR_7g033990 27.729 339 189 11 16 348 9 297 1.23e-21 95.9
MS.gene033695.t1 MTR_3g467400 29.882 338 193 14 17 339 2 310 1.73e-21 94.7
MS.gene033695.t1 MTR_7g056420 30.183 328 157 11 18 339 9 270 4.57e-21 95.5
MS.gene033695.t1 MTR_7g098570 29.226 349 175 15 1 335 7 297 4.73e-21 94.7
MS.gene033695.t1 MTR_7g056430 30.183 328 157 11 18 339 9 270 4.76e-21 95.5
MS.gene033695.t1 MTR_1g108820 29.268 369 189 16 15 363 5 321 6.98e-21 93.2
MS.gene033695.t1 MTR_3g036250 30.746 335 163 14 17 341 4 279 7.73e-21 92.8
MS.gene033695.t1 MTR_1g108820 30.636 346 169 16 15 340 5 299 2.42e-20 91.3
MS.gene033695.t1 MTR_7g007080 27.826 345 172 12 18 342 4 291 2.69e-20 91.7
MS.gene033695.t1 MTR_5g058000 29.254 335 169 12 17 339 7 285 3.20e-20 91.3
MS.gene033695.t1 MTR_5g073340 30.581 327 156 12 17 337 7 268 3.68e-20 90.1
MS.gene033695.t1 MTR_3g108150 28.691 359 174 13 13 348 4 303 3.77e-20 91.3
MS.gene033695.t1 MTR_3g107140 32.719 217 114 7 27 235 1 193 4.81e-20 87.4
MS.gene033695.t1 MTR_7g056433 29.940 334 182 12 12 337 6 295 5.73e-20 90.5
MS.gene033695.t1 MTR_5g073370 29.052 327 184 10 18 339 5 288 1.44e-19 89.4
MS.gene033695.t1 MTR_5g045170 28.824 340 173 13 17 339 13 300 4.41e-19 88.2
MS.gene033695.t1 MTR_5g058100 28.267 329 190 9 16 339 7 294 1.00e-18 87.0
MS.gene033695.t1 MTR_2g007460 41.322 121 50 3 16 136 10 109 1.15e-18 81.3
MS.gene033695.t1 MTR_6g022360 29.805 359 183 12 17 363 42 343 1.38e-18 86.7
MS.gene033695.t1 MTR_7g034090 38.462 169 79 4 16 180 2 149 1.55e-18 86.7
MS.gene033695.t1 MTR_7g055943 30.240 334 177 11 16 339 38 325 1.76e-18 86.7
MS.gene033695.t1 MTR_5g045510 29.139 302 172 11 14 315 8 267 1.94e-18 86.3
MS.gene033695.t1 MTR_4g134150 28.519 270 138 8 15 280 11 229 4.04e-18 82.8
MS.gene033695.t1 MTR_1g066830 27.964 329 187 10 14 333 4 291 5.60e-18 84.7
MS.gene033695.t1 MTR_5g061680 27.077 325 165 9 16 335 9 266 7.36e-18 84.0
MS.gene033695.t1 MTR_7g056447 32.536 209 111 7 15 222 6 185 7.70e-18 83.2
MS.gene033695.t1 MTR_3g023630 27.829 327 175 11 17 334 7 281 8.07e-18 84.3
MS.gene033695.t1 MTR_5g031970 26.786 336 151 11 17 340 15 267 1.34e-17 83.6
MS.gene033695.t1 MTR_6g011460 28.267 329 185 12 17 339 45 328 1.38e-17 84.0
MS.gene033695.t1 MTR_6g040270 28.308 325 183 10 20 339 10 289 1.76e-17 83.2
MS.gene033695.t1 MTR_8g445780 26.404 356 199 13 18 335 13 343 2.34e-17 83.2
MS.gene033695.t1 MTR_5g008920 27.190 331 184 10 16 339 10 290 2.65e-17 82.8
MS.gene033695.t1 MTR_7g088260 28.212 358 195 14 18 363 91 398 4.20e-17 82.8
MS.gene033695.t1 MTR_0543s0010 26.997 363 176 13 3 347 75 366 8.91e-17 81.6
MS.gene033695.t1 MTR_0492s0020 26.997 363 176 13 3 347 75 366 9.21e-17 81.6
MS.gene033695.t1 MTR_6g022500 26.888 331 190 12 17 339 100 386 1.50e-16 81.3
MS.gene033695.t1 MTR_8g077460 29.143 350 184 14 18 357 10 305 1.53e-16 80.5
MS.gene033695.t1 MTR_7g056280 32.308 195 107 6 20 203 8 188 2.07e-16 80.9
MS.gene033695.t1 MTR_6g013160 26.984 378 202 12 11 340 2 353 6.90e-16 79.0
MS.gene033695.t1 MTR_7g056277 27.160 324 181 10 18 335 259 533 7.59e-16 79.3
MS.gene033695.t1 MTR_5g007410 28.916 332 182 14 20 339 28 317 1.12e-15 78.6
MS.gene033695.t1 MTR_8g062010 31.718 227 114 10 1 222 1 191 1.93e-15 77.8
MS.gene033695.t1 MTR_5g084070 24.474 380 204 11 1 340 1 337 2.72e-15 77.0
MS.gene033695.t1 MTR_1g013560 28.326 233 141 9 1 229 1 211 3.32e-15 76.3
MS.gene033695.t1 MTR_2g036470 27.647 340 194 11 16 345 12 309 3.39e-15 76.6
MS.gene033695.t1 MTR_8g062080 32.645 242 124 13 1 233 6 217 3.75e-15 76.6
MS.gene033695.t1 MTR_7g056287 26.687 326 184 10 18 337 3 279 3.75e-15 76.3
MS.gene033695.t1 MTR_7g033470 37.607 117 68 2 8 120 4 119 3.86e-15 72.4
MS.gene033695.t1 MTR_6g044560 29.254 335 177 11 16 335 176 465 4.00e-15 77.0
MS.gene033695.t1 MTR_7g034110 24.332 337 166 10 15 348 8 258 5.47e-15 75.9
MS.gene033695.t1 MTR_1g013560 28.326 233 141 9 1 229 1 211 6.96e-15 75.9
MS.gene033695.t1 MTR_1g492880 47.727 88 42 2 18 105 6 89 7.70e-15 70.5
MS.gene033695.t1 MTR_1g492880 47.727 88 42 2 18 105 6 89 8.14e-15 70.1
MS.gene033695.t1 MTR_5g039450 26.426 333 177 13 17 339 5 279 8.41e-15 75.1
MS.gene033695.t1 MTR_6g044572 29.042 334 177 11 17 335 1 289 1.01e-14 75.1
MS.gene033695.t1 MTR_8g058970 29.876 241 134 9 5 227 6 229 1.20e-14 75.5
MS.gene033695.t1 MTR_8g468760 29.032 217 130 8 16 226 7 205 1.25e-14 75.1
MS.gene033695.t1 MTR_8g062310 27.511 229 131 7 4 230 11 206 1.70e-14 74.7
MS.gene033695.t1 MTR_1g014450 29.108 213 131 7 18 229 16 209 6.06e-14 73.2
MS.gene033695.t1 MTR_7g114710 27.108 332 161 13 15 337 10 269 9.24e-14 72.0
MS.gene033695.t1 MTR_2g082800 27.755 245 146 9 1 232 9 235 2.19e-13 71.2
MS.gene033695.t1 MTR_8g058965 31.839 223 119 9 16 224 11 214 2.89e-13 71.2
MS.gene033695.t1 MTR_2g091145 27.074 229 146 7 1 227 3 212 3.27e-13 70.9
MS.gene033695.t1 MTR_7g060470 27.193 342 178 13 18 335 3 297 4.16e-13 70.5
MS.gene033695.t1 MTR_6g029350 38.583 127 58 3 213 339 1 107 5.54e-13 68.2
MS.gene033695.t1 MTR_7g090750 33.649 211 120 6 17 227 10 200 6.52e-13 70.1
MS.gene033695.t1 MTR_3g110010 31.100 209 110 6 18 224 13 189 8.74e-13 70.1
MS.gene033695.t1 MTR_3g048290 28.571 238 147 5 17 253 22 237 1.33e-12 68.9
MS.gene033695.t1 MTR_3g109982 31.280 211 111 6 18 226 13 191 1.47e-12 69.3
MS.gene033695.t1 MTR_4g080773 26.087 391 184 14 18 337 19 375 1.59e-12 68.9
MS.gene033695.t1 MTR_2g047858 29.075 227 137 8 5 229 101 305 1.83e-12 68.9
MS.gene033695.t1 MTR_3g114200 31.183 186 89 6 1 176 1 157 2.21e-12 65.1
MS.gene033695.t1 MTR_4g080773 26.087 391 184 14 18 337 19 375 2.30e-12 68.6
MS.gene033695.t1 MTR_5g039490 27.526 287 161 12 2 279 6 254 2.68e-12 67.8
MS.gene033695.t1 MTR_4g032730 28.700 223 130 8 17 231 14 215 4.99e-12 67.4
MS.gene033695.t1 MTR_5g092960 26.512 215 136 6 16 226 17 213 6.49e-12 66.6
MS.gene033695.t1 MTR_3g113782 45.349 86 38 3 1 78 1 85 1.01e-11 60.8
MS.gene033695.t1 MTR_5g092960 26.512 215 136 6 16 226 17 213 1.07e-11 66.2
MS.gene033695.t1 MTR_2g082880 30.894 123 71 2 18 138 10 120 1.27e-11 65.9
MS.gene033695.t1 MTR_2g008300 52.857 70 29 1 166 235 4 69 1.32e-11 60.1
MS.gene033695.t1 MTR_2g082850 32.432 148 72 6 1 138 9 138 1.54e-11 65.5
MS.gene033695.t1 MTR_2g082860 49.206 63 31 1 1 62 9 71 1.71e-11 61.2
MS.gene033695.t1 MTR_0009s0080 26.727 333 187 12 20 339 20 308 2.06e-11 65.5
MS.gene033695.t1 MTR_1g013580 27.273 231 146 7 1 229 1 211 2.22e-11 65.1
MS.gene033695.t1 MTR_8g467800 30.000 230 135 9 2 229 3 208 2.52e-11 64.7
MS.gene033695.t1 MTR_2g007100 47.368 76 35 2 17 87 1 76 2.66e-11 59.7
MS.gene033695.t1 MTR_4g050250 27.626 257 141 8 5 243 8 237 4.18e-11 64.3
MS.gene033695.t1 MTR_5g076150 30.693 202 102 9 151 333 18 200 4.77e-11 62.8
MS.gene033695.t1 MTR_8g469020 28.889 225 129 7 14 224 3 210 4.98e-11 64.3
MS.gene033695.t1 MTR_8g062270 24.670 227 146 7 16 237 14 220 5.48e-11 63.9
MS.gene033695.t1 MTR_8g467800 30.000 230 135 9 2 229 3 208 5.52e-11 63.9
MS.gene033695.t1 MTR_8g014290 31.875 160 91 5 18 169 10 159 8.87e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033695.t1 AT1G16930 27.642 369 185 11 18 335 15 352 9.96e-25 105
MS.gene033695.t1 AT1G16930 27.642 369 185 11 18 335 15 352 9.96e-25 105
MS.gene033695.t1 AT1G16930 27.642 369 185 11 18 335 15 352 9.96e-25 105
MS.gene033695.t1 AT1G78750 29.771 393 188 18 2 335 3 366 1.78e-24 104
MS.gene033695.t1 AT1G78750 29.771 393 188 18 2 335 3 366 1.78e-24 104
MS.gene033695.t1 AT4G13985 27.792 385 205 14 4 337 5 367 2.18e-23 101
MS.gene033695.t1 AT3G60040 29.553 291 148 10 18 277 13 277 3.48e-19 89.4
MS.gene033695.t1 AT3G58860 26.997 363 198 13 17 337 6 343 5.11e-19 88.6
MS.gene033695.t1 AT3G52680 26.479 355 201 13 18 341 21 346 6.56e-19 87.4
MS.gene033695.t1 AT3G60040 26.685 371 197 13 18 335 233 581 6.97e-19 89.0
MS.gene033695.t1 AT3G60040 26.685 371 197 13 18 335 232 580 7.09e-19 89.0
MS.gene033695.t1 AT3G60040 29.553 291 148 10 18 277 230 494 7.28e-19 88.6
MS.gene033695.t1 AT3G60040 29.553 291 148 10 18 277 232 496 7.99e-19 88.6
MS.gene033695.t1 AT4G00160 28.045 353 192 13 18 337 16 339 1.10e-18 87.4
MS.gene033695.t1 AT4G14103 28.238 386 182 14 18 342 8 359 1.54e-18 87.0
MS.gene033695.t1 AT3G58940 26.158 367 191 15 17 335 1 335 2.34e-18 87.0
MS.gene033695.t1 AT3G58940 26.158 367 191 15 17 335 1 335 2.34e-18 87.0
MS.gene033695.t1 AT3G52680 26.781 351 197 13 18 337 21 342 2.62e-18 86.3
MS.gene033695.t1 AT4G14103 27.778 378 180 13 18 335 8 352 3.63e-18 85.5
MS.gene033695.t1 AT4G14103 27.778 378 180 13 18 335 8 352 3.63e-18 85.5
MS.gene033695.t1 AT3G26922 32.857 210 111 6 18 226 14 194 4.75e-18 84.0
MS.gene033695.t1 AT3G26922 32.857 210 111 6 18 226 14 194 4.75e-18 84.0
MS.gene033695.t1 AT1G69630 28.316 392 191 17 1 335 1 359 6.51e-18 85.1
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 2.17e-17 82.0
MS.gene033695.t1 AT4G26340 27.841 352 193 12 17 337 1 322 2.25e-17 83.2
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 3.65e-17 82.0
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 3.65e-17 82.0
MS.gene033695.t1 AT3G59190 25.871 402 203 14 18 353 12 384 4.05e-17 82.4
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 4.15e-17 82.4
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 4.15e-17 82.4
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 4.15e-17 82.4
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 4.15e-17 82.4
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 21 211 4.75e-17 82.4
MS.gene033695.t1 AT1G06630 34.123 211 115 7 18 224 12 202 7.24e-17 82.0
MS.gene033695.t1 AT1G51370 24.745 392 204 14 2 348 4 349 8.82e-17 81.6
MS.gene033695.t1 AT1G51370 24.745 392 204 14 2 348 4 349 1.00e-16 81.6
MS.gene033695.t1 AT1G51370 24.742 388 201 14 2 344 4 345 1.02e-16 80.9
MS.gene033695.t1 AT3G59200 24.485 388 200 13 18 340 7 366 1.22e-16 81.6
MS.gene033695.t1 AT2G26860 31.132 212 120 7 17 226 1 188 2.05e-16 80.5
MS.gene033695.t1 AT2G26860 31.132 212 120 7 17 226 1 188 2.05e-16 80.5
MS.gene033695.t1 AT3G59200 25.974 385 192 15 18 337 7 363 2.34e-16 80.1
MS.gene033695.t1 AT5G22660 25.926 378 187 13 18 337 13 355 3.68e-16 79.7
MS.gene033695.t1 AT1G13780 29.528 254 135 12 10 250 2 224 4.91e-16 78.6
MS.gene033695.t1 AT3G58880 26.562 384 197 13 17 343 2 357 5.15e-16 79.3
MS.gene033695.t1 AT3G44060 31.754 211 122 4 20 230 1 189 7.97e-16 79.0
MS.gene033695.t1 AT1G13780 29.528 254 135 12 10 250 2 224 8.50e-16 79.0
MS.gene033695.t1 AT5G22720 28.319 226 132 6 18 242 23 219 9.83e-16 78.6
MS.gene033695.t1 AT3G42770 30.942 223 124 6 20 232 1 203 1.19e-15 78.6
MS.gene033695.t1 AT3G59190 26.562 384 188 14 18 335 12 367 1.41e-15 78.2
MS.gene033695.t1 AT5G22660 30.698 215 109 7 18 227 13 192 2.38e-15 76.3
MS.gene033695.t1 AT4G14096 26.776 366 192 13 18 335 8 345 3.57e-15 77.0
MS.gene033695.t1 AT4G14096 26.776 366 192 13 18 335 8 345 3.57e-15 77.0
MS.gene033695.t1 AT1G66290 26.065 399 195 16 2 337 5 366 3.89e-15 76.6
MS.gene033695.t1 AT1G78760 30.337 267 126 13 4 260 8 224 7.77e-15 75.9
MS.gene033695.t1 AT3G59210 30.415 217 125 6 18 231 7 200 8.89e-15 75.9
MS.gene033695.t1 AT3G59210 30.415 217 125 6 18 231 7 200 8.89e-15 75.9
MS.gene033695.t1 AT3G59210 30.415 217 125 6 18 231 7 200 8.89e-15 75.9
MS.gene033695.t1 AT3G59210 30.415 217 125 6 18 231 7 200 8.89e-15 75.9
MS.gene033695.t1 AT3G59210 30.415 217 125 6 18 231 7 200 8.89e-15 75.9
MS.gene033695.t1 AT4G26350 27.586 232 134 7 17 246 1 200 1.18e-14 75.1
MS.gene033695.t1 AT5G53840 27.213 305 178 10 18 313 18 287 1.27e-14 75.1
MS.gene033695.t1 AT4G13965 31.308 214 107 6 18 226 10 188 2.06e-14 74.3
MS.gene033695.t1 AT5G41630 31.004 229 136 8 18 241 12 223 3.05e-14 73.9
MS.gene033695.t1 AT1G66300 23.810 399 204 17 2 335 5 368 3.50e-14 73.9
MS.gene033695.t1 AT5G22700 26.331 338 195 11 18 337 43 344 6.74e-14 73.2
MS.gene033695.t1 AT5G44950 30.000 210 120 7 18 227 4 186 6.78e-14 73.2
MS.gene033695.t1 AT1G66320 24.259 371 187 14 23 335 35 369 7.34e-14 72.8
MS.gene033695.t1 AT3G58900 25.065 383 196 15 17 335 1 356 9.30e-14 72.8
MS.gene033695.t1 AT5G56440 30.047 213 113 4 17 224 1 182 9.62e-14 72.4
MS.gene033695.t1 AT5G41840 29.130 230 133 7 18 237 14 223 1.27e-13 72.4
MS.gene033695.t1 AT5G25850 29.004 231 123 9 1 226 2 196 1.30e-13 72.4
MS.gene033695.t1 AT3G59160 29.741 232 115 7 18 224 13 221 1.32e-13 72.0
MS.gene033695.t1 AT5G22610 25.287 348 208 10 18 337 18 341 1.83e-13 71.6
MS.gene033695.t1 AT3G44810 32.701 211 117 9 20 226 9 198 2.15e-13 71.6
MS.gene033695.t1 AT5G22670 32.701 211 108 7 18 226 11 189 2.62e-13 71.2
MS.gene033695.t1 AT5G56370 25.429 350 207 11 17 342 1 320 3.03e-13 70.5
MS.gene033695.t1 AT3G51530 29.870 231 126 9 9 237 21 217 4.86e-13 70.5
MS.gene033695.t1 AT5G22700 29.907 214 116 6 18 229 6 187 5.32e-13 70.1
MS.gene033695.t1 AT5G22700 29.907 214 116 6 18 229 6 187 5.32e-13 70.1
MS.gene033695.t1 AT5G22700 29.907 214 116 6 18 229 6 187 5.32e-13 70.1
MS.gene033695.t1 AT5G22700 29.907 214 116 6 18 229 6 187 5.32e-13 70.1
MS.gene033695.t1 AT5G22700 29.907 214 116 6 18 229 43 224 5.40e-13 70.5
MS.gene033695.t1 AT1G66310 22.912 419 216 11 5 365 6 375 6.02e-13 70.1
MS.gene033695.t1 AT5G53640 27.642 246 124 9 4 236 3 207 6.20e-13 68.2
MS.gene033695.t1 AT5G56410 30.275 218 129 5 17 226 1 203 7.68e-13 70.1
MS.gene033695.t1 AT4G10400 31.250 224 113 9 17 233 1 190 7.77e-13 69.7
MS.gene033695.t1 AT4G10400 31.250 224 113 9 17 233 1 190 7.77e-13 69.7
MS.gene033695.t1 AT4G10400 31.250 224 113 9 17 233 1 190 7.77e-13 69.7
MS.gene033695.t1 AT1G48400 32.381 210 115 7 18 224 10 195 7.95e-13 70.1
MS.gene033695.t1 AT1G48400 32.381 210 115 7 18 224 10 195 9.11e-13 69.7
MS.gene033695.t1 AT2G04230 31.925 213 116 8 18 226 13 200 1.10e-12 69.3
MS.gene033695.t1 AT5G60610 29.524 210 113 6 17 224 1 177 1.14e-12 68.9
MS.gene033695.t1 AT5G60610 29.524 210 113 6 17 224 1 177 1.14e-12 68.9
MS.gene033695.t1 AT3G58930 23.737 396 195 17 17 335 1 366 1.25e-12 69.3
MS.gene033695.t1 AT3G58930 23.737 396 195 17 17 335 1 366 1.25e-12 69.3
MS.gene033695.t1 AT3G58930 23.737 396 195 17 17 335 1 366 1.25e-12 69.3
MS.gene033695.t1 AT3G59170 26.290 407 184 15 18 335 7 386 1.37e-12 68.9
MS.gene033695.t1 AT5G56370 25.507 345 203 11 17 337 1 315 1.54e-12 68.9
MS.gene033695.t1 AT5G56370 25.507 345 203 11 17 337 1 315 1.54e-12 68.9
MS.gene033695.t1 AT2G29910 28.862 246 128 8 18 256 5 210 1.90e-12 68.2
MS.gene033695.t1 AT2G29910 28.862 246 128 8 18 256 5 210 1.90e-12 68.2
MS.gene033695.t1 AT2G29910 28.862 246 128 8 18 256 5 210 1.90e-12 68.2
MS.gene033695.t1 AT2G29910 28.862 246 128 8 18 256 5 210 1.90e-12 68.2
MS.gene033695.t1 AT1G78840 25.469 373 178 15 23 338 11 340 2.03e-12 68.6
MS.gene033695.t1 AT1G78840 25.469 373 178 15 23 338 11 340 2.03e-12 68.6
MS.gene033695.t1 AT2G29910 28.862 246 128 8 18 256 29 234 2.18e-12 68.2
MS.gene033695.t1 AT2G29910 28.862 246 128 8 18 256 5 210 2.19e-12 67.8
MS.gene033695.t1 AT2G29910 28.862 246 128 8 18 256 5 210 2.19e-12 67.8
MS.gene033695.t1 AT5G18780 26.695 236 139 6 18 251 11 214 4.99e-12 67.0
MS.gene033695.t1 AT5G18780 26.695 236 139 6 18 251 11 214 4.99e-12 67.0
MS.gene033695.t1 AT4G27050 30.734 218 122 9 17 224 3 201 5.27e-12 67.4
MS.gene033695.t1 AT4G27050 30.734 218 122 9 17 224 3 201 5.27e-12 67.4
MS.gene033695.t1 AT4G27050 30.734 218 122 9 17 224 3 201 5.27e-12 67.4
MS.gene033695.t1 AT4G27050 30.734 218 122 9 17 224 3 201 5.27e-12 67.4
MS.gene033695.t1 AT4G27050 30.734 218 122 9 17 224 3 201 5.27e-12 67.4
MS.gene033695.t1 AT3G58900 29.259 270 146 11 17 281 1 230 5.49e-12 66.6
MS.gene033695.t1 AT5G18780 26.695 236 139 6 18 251 11 214 6.48e-12 67.0
MS.gene033695.t1 AT5G18780 26.695 236 139 6 18 251 11 214 6.48e-12 67.0
MS.gene033695.t1 AT3G58900 29.259 270 146 11 17 281 1 230 6.96e-12 66.2
MS.gene033695.t1 AT3G58900 29.259 270 146 11 17 281 1 230 6.96e-12 66.2
MS.gene033695.t1 AT1G80470 29.204 226 115 9 18 234 15 204 7.26e-12 67.0
MS.gene033695.t1 AT3G58960 24.869 382 191 16 17 335 1 349 7.90e-12 66.6
MS.gene033695.t1 AT4G00320 24.378 402 208 16 18 354 13 383 1.04e-11 66.6
MS.gene033695.t1 AT5G56820 25.434 346 197 12 18 337 15 325 1.15e-11 66.2
MS.gene033695.t1 AT4G09920 28.750 240 131 8 17 249 1 207 1.15e-11 65.1
MS.gene033695.t1 AT4G09920 28.750 240 131 8 17 249 1 207 1.15e-11 65.1
MS.gene033695.t1 AT4G09920 28.750 240 131 8 17 249 1 207 1.15e-11 65.1
MS.gene033695.t1 AT4G09920 30.275 218 112 8 17 227 1 185 1.17e-11 65.5
MS.gene033695.t1 AT4G09920 30.275 218 112 8 17 227 1 185 1.17e-11 65.5
MS.gene033695.t1 AT5G41830 28.163 245 142 10 18 252 13 233 1.81e-11 65.9
MS.gene033695.t1 AT1G60400 24.029 412 219 15 16 364 12 392 2.72e-11 65.1
MS.gene033695.t1 AT5G56560 28.302 212 119 7 19 228 6 186 2.99e-11 64.7
MS.gene033695.t1 AT1G55660 30.476 210 120 7 17 224 52 237 3.21e-11 64.3
MS.gene033695.t1 AT5G56560 26.724 232 137 7 19 248 6 206 3.32e-11 65.1
MS.gene033695.t1 AT3G59000 28.807 243 122 10 17 232 1 219 3.66e-11 64.3
MS.gene033695.t1 AT3G44080 33.333 171 91 6 10 176 2 153 3.77e-11 64.3
MS.gene033695.t1 AT5G56420 29.060 234 139 6 18 251 6 212 4.62e-11 64.3
MS.gene033695.t1 AT5G56420 29.060 234 139 6 18 251 6 212 4.62e-11 64.3
MS.gene033695.t1 AT5G56420 29.060 234 139 6 18 251 6 212 4.62e-11 64.3
MS.gene033695.t1 AT1G55660 30.476 210 120 7 17 224 52 237 5.08e-11 64.3
MS.gene033695.t1 AT3G49020 30.476 210 115 7 18 226 22 201 7.01e-11 63.9
MS.gene033695.t1 AT4G00315 27.962 211 128 6 17 226 1 188 8.91e-11 63.5
MS.gene033695.t1 AT3G49040 29.907 214 115 8 18 226 17 200 9.37e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAATACCAACAGGTAATT+TGG 0.204502 7.3:+24701062 None:intergenic
ATATGTGCACTAATCAATTT+TGG 0.234592 7.3:+24700775 None:intergenic
ATTAGATTTGGATTTGGATT+TGG 0.281235 7.3:-24700973 MS.gene033695:CDS
TGAGTCTATATACTCAATTT+TGG 0.296206 7.3:-24701289 MS.gene033695:CDS
GATTCTTCTTCTATTAGATT+TGG 0.302275 7.3:-24700985 MS.gene033695:CDS
GCTTGTGGCAACTGCCTCTT+TGG 0.307775 7.3:+24701413 None:intergenic
TTTAGTCTCGAAATTGAATA+TGG 0.325057 7.3:-24701228 MS.gene033695:CDS
TCTTCTATTAGATTTGGATT+TGG 0.328909 7.3:-24700979 MS.gene033695:CDS
ATCACTCAATGTCCTTCATT+TGG 0.338044 7.3:-24700944 MS.gene033695:CDS
GATGATGATGATGAAGAATA+TGG 0.354091 7.3:-24701090 MS.gene033695:CDS
TATGATCTAGCCTTACGTTT+TGG 0.357736 7.3:-24701201 MS.gene033695:CDS
ACTCGTAGATGCTCAAGATT+TGG 0.374943 7.3:+24700868 None:intergenic
GGATAAGATCAGCAGTTTAC+CGG 0.376662 7.3:-24701472 MS.gene033695:CDS
GATTGGAGCTTTACGATGAT+TGG 0.378888 7.3:-24700297 MS.gene033695:CDS
CGGGACAAATTATGAAAGAT+AGG 0.382552 7.3:+24700319 None:intergenic
AAAAGATCACAAATTCTTCC+AGG 0.388189 7.3:-24700665 MS.gene033695:intron
AGTTCGAGATGTTGAAGCTT+AGG 0.389430 7.3:+24700244 None:intergenic
TTGGTCTCTCGCGACGCCGC+TGG 0.397259 7.3:-24701270 MS.gene033695:CDS
CAAAGAGATGGACTCATCTC+TGG 0.406201 7.3:-24701383 MS.gene033695:CDS
AGAATACCAACAGGTAATTT+GGG 0.415078 7.3:+24701063 None:intergenic
CTTTCATAATTTGTCCCGAT+TGG 0.417482 7.3:-24700314 MS.gene033695:CDS
GCATTCACAACGTCAACAAA+TGG 0.428875 7.3:-24701179 MS.gene033695:CDS
GTGGCAACTGCCTCTTTGGT+AGG 0.428995 7.3:+24701417 None:intergenic
ATTGGAGCTTTACGATGATT+GGG 0.449702 7.3:-24700296 MS.gene033695:CDS
GTTCGAGATGTTGAAGCTTA+GGG 0.452873 7.3:+24700245 None:intergenic
ATCAAGGTTCATCCATTGTA+CGG 0.465478 7.3:-24699647 MS.gene033695:CDS
TCAACATCTCGAACTTTACA+AGG 0.468919 7.3:-24700236 MS.gene033695:intron
CTTGAGCATCTACGAGTTGT+GGG 0.478913 7.3:-24700862 MS.gene033695:CDS
ATCTTATCCACCGCTGGTGG+TGG 0.483228 7.3:+24701486 None:intergenic
TGGCAACTGCCTCTTTGGTA+GGG 0.485980 7.3:+24701418 None:intergenic
AGACTTGATTGCACAGCCAC+AGG 0.489740 7.3:-24699605 MS.gene033695:CDS
GTTGAAGCTTAGGGCAGTGT+TGG 0.492971 7.3:+24700254 None:intergenic
AATCATCGTAAAGCTCCAAT+CGG 0.505933 7.3:+24700299 None:intergenic
TTATCCACCGCTGGTGGTGG+TGG 0.512107 7.3:+24701489 None:intergenic
TACCGGACGCGATTCTGAGC+GGG 0.516154 7.3:-24701455 MS.gene033695:CDS
TCTTGAGCATCTACGAGTTG+TGG 0.523909 7.3:-24700863 MS.gene033695:CDS
CAGGGCAGAGGCGTGTATGA+AGG 0.527197 7.3:-24699586 None:intergenic
GCGGATCTACTTCCTCATCA+TGG 0.529242 7.3:+24700830 None:intergenic
ACCGACGGTATCAACTTCTC+CGG 0.535091 7.3:-24701354 MS.gene033695:CDS
AGATCACATCGTCCAAATGA+AGG 0.536500 7.3:+24700932 None:intergenic
ATCATCGTAAAGCTCCAATC+GGG 0.537395 7.3:+24700300 None:intergenic
CAAGGAACCAACCGAGGTCG+AGG 0.544035 7.3:+24701019 None:intergenic
ATCCCGCTCAGAATCGCGTC+CGG 0.546632 7.3:+24701453 None:intergenic
CTGCTGATCTTATCCACCGC+TGG 0.548082 7.3:+24701480 None:intergenic
GTTGTGAATGCCAAAACGTA+AGG 0.555391 7.3:+24701191 None:intergenic
ATTGCACAGCCACAGGGCAG+AGG 0.558750 7.3:-24699598 MS.gene033695:CDS
CAAGCATTCTCTCAAAGAGA+TGG 0.559752 7.3:-24701395 MS.gene033695:CDS
TCAAGGTTCATCCATTGTAC+GGG 0.571360 7.3:-24699646 MS.gene033695:CDS
AAGAAGAAATGGGGCGACGG+AGG 0.571428 7.3:-24701530 None:intergenic
GGAATACCCAAATTACCTGT+TGG 0.572473 7.3:-24701069 MS.gene033695:CDS
GGGCAGTGTTGGAGCACTTG+CGG 0.573680 7.3:+24700265 None:intergenic
TTAAACTCTTGAATGAATAG+CGG 0.574225 7.3:+24700811 None:intergenic
AACAAGAAGAAATGGGGCGA+CGG 0.574256 7.3:-24701533 None:intergenic
GTACATGTGAGAATACCAAC+AGG 0.575641 7.3:+24701054 None:intergenic
AAATTAGATAGTGCTTTCAA+CGG 0.589096 7.3:+24700724 None:intergenic
GCTTTACGATGATTGGGAGG+TGG 0.590171 7.3:-24700290 MS.gene033695:CDS
GTCTCGTCTCCCTACCAAAG+AGG 0.593043 7.3:-24701427 MS.gene033695:CDS
TTGTAAGCCTCGACCTCGGT+TGG 0.593890 7.3:-24701026 MS.gene033695:CDS
AAATGAAGGACATTGAGTGA+TGG 0.599122 7.3:+24700946 None:intergenic
TCTCTTTGAGAGAATGCTTG+TGG 0.599916 7.3:+24701398 None:intergenic
AGCACCACCACCACCAGCGG+TGG 0.617768 7.3:-24701493 MS.gene033695:CDS
GACTTGATTGCACAGCCACA+GGG 0.622709 7.3:-24699604 MS.gene033695:CDS
GTTATTCACTGTGATGATGC+CGG 0.628120 7.3:+24701335 None:intergenic
CTAATAGAAGAAGAATCGAA+AGG 0.629105 7.3:+24700991 None:intergenic
AGATAGGAATATCATCGTAA+CGG 0.630870 7.3:+24700335 None:intergenic
AAGAATCGAAAGGCTTCACA+AGG 0.633081 7.3:+24701001 None:intergenic
AGAAGCACCACCACCACCAG+CGG 0.633130 7.3:-24701496 MS.gene033695:CDS
GCATACATGTGCCCGTACAA+TGG 0.635239 7.3:+24699635 None:intergenic
CAAGGCTATTCACACTGACG+TGG 0.636781 7.3:+24701115 None:intergenic
GCCGGAGAAGTTGATACCGT+CGG 0.639653 7.3:+24701353 None:intergenic
CTGATCTTATCCACCGCTGG+TGG 0.645294 7.3:+24701483 None:intergenic
TATCTAATTTGAAGTCTCTG+AGG 0.648071 7.3:-24700711 MS.gene033695:CDS
GGAGCTTTACGATGATTGGG+AGG 0.649670 7.3:-24700293 MS.gene033695:CDS
CATCTCTGGAAATTTACCGA+CGG 0.653189 7.3:-24701369 MS.gene033695:CDS
ATCGATGAAATGAGAGCCAG+CGG 0.657046 7.3:+24701254 None:intergenic
GGGTATATACTTCCATGATG+AGG 0.659733 7.3:-24700842 MS.gene033695:CDS
GCTTCACAAGGAACCAACCG+AGG 0.686050 7.3:+24701013 None:intergenic
TCATACACGCCTCTGCCCTG+TGG 0.686102 7.3:+24699589 None:intergenic
ACACTTGTAAGCCTCGACCT+CGG 0.696576 7.3:-24701030 MS.gene033695:CDS
TTACCGGACGCGATTCTGAG+CGG 0.700251 7.3:-24701456 MS.gene033695:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATATAAATAAAAAGTT+AGG + chr7.3:24701407-24701426 None:intergenic 10.0%
!! TGTATATAAATAAAAAGTTA+GGG + chr7.3:24701406-24701425 None:intergenic 10.0%
!! AAAAGAAAAAAGAAAAAACA+TGG + chr7.3:24700692-24700711 None:intergenic 15.0%
!! GTTATCAATAAAATAAAAGT+CGG + chr7.3:24701218-24701237 None:intergenic 15.0%
!! AAAAAGATGATGAAGAAAAT+TGG - chr7.3:24700983-24701002 MS.gene033695:CDS 20.0%
!! AAAAGATGATGAAGAAAATT+GGG - chr7.3:24700984-24701003 MS.gene033695:CDS 20.0%
!! ATAAATAAATAAAACGAACC+TGG + chr7.3:24700467-24700486 None:intergenic 20.0%
!! TAGTTATGTGCAATATTAAT+AGG - chr7.3:24700960-24700979 MS.gene033695:CDS 20.0%
!! TATAATCAAATTGGAGAAAA+CGG + chr7.3:24700595-24700614 None:intergenic 20.0%
!! TGTAATCAATTGTGTTATAT+TGG + chr7.3:24700544-24700563 None:intergenic 20.0%
!!! AGCAAAATATATTTTGATGA+AGG - chr7.3:24701098-24701117 MS.gene033695:CDS 20.0%
!!! GACAATTTTCTTTTGATTTT+AGG + chr7.3:24701168-24701187 None:intergenic 20.0%
! AAATTAGATAGTGCTTTCAA+CGG + chr7.3:24700390-24700409 None:intergenic 25.0%
! AAGAAAAGATAAACCGAATA+TGG + chr7.3:24700925-24700944 None:intergenic 25.0%
! AGACAGTATTATATAGATTG+AGG + chr7.3:24700517-24700536 None:intergenic 25.0%
! ATCTAATTGAAGTCATAAAC+AGG + chr7.3:24701446-24701465 None:intergenic 25.0%
! ATTAGATTTGGATTTGGATT+TGG - chr7.3:24700138-24700157 MS.gene033695:intron 25.0%
! ATTGCACATAACTAAAGTTA+AGG + chr7.3:24700954-24700973 None:intergenic 25.0%
! GATTCTTCTTCTATTAGATT+TGG - chr7.3:24700126-24700145 MS.gene033695:intron 25.0%
! TAAGAAGTAAGAACCATATT+CGG - chr7.3:24700909-24700928 MS.gene033695:CDS 25.0%
! TCTTCTATTAGATTTGGATT+TGG - chr7.3:24700132-24700151 MS.gene033695:intron 25.0%
! TTAAACTCTTGAATGAATAG+CGG + chr7.3:24700303-24700322 None:intergenic 25.0%
! TTATGACTTCAATTAGATCA+AGG - chr7.3:24701448-24701467 MS.gene033695:CDS 25.0%
! TTTAGTCTCGAAATTGAATA+TGG - chr7.3:24699883-24699902 MS.gene033695:intron 25.0%
!! ATATGTGCACTAATCAATTT+TGG + chr7.3:24700339-24700358 None:intergenic 25.0%
!! TGAGTCTATATACTCAATTT+TGG - chr7.3:24699822-24699841 MS.gene033695:intron 25.0%
!! TTTTACAAATCATGGAAATC+TGG - chr7.3:24701127-24701146 MS.gene033695:CDS 25.0%
!!! CTGTTTTATTAGCTTCTATT+TGG - chr7.3:24701277-24701296 MS.gene033695:CDS 25.0%
AAAAGATCACAAATTCTTCC+AGG - chr7.3:24700446-24700465 MS.gene033695:intron 30.0%
AAAGACACACTATCAAATTG+GGG + chr7.3:24700726-24700745 None:intergenic 30.0%
AGAATACCAACAGGTAATTT+GGG + chr7.3:24700051-24700070 None:intergenic 30.0%
AGATAGGAATATCATCGTAA+CGG + chr7.3:24700779-24700798 None:intergenic 30.0%
CTAATAGAAGAAGAATCGAA+AGG + chr7.3:24700123-24700142 None:intergenic 30.0%
GAAAGACACACTATCAAATT+GGG + chr7.3:24700727-24700746 None:intergenic 30.0%
GGACTGACATATAATCAAAT+TGG + chr7.3:24700604-24700623 None:intergenic 30.0%
! GATGATGATGATGAAGAATA+TGG - chr7.3:24700021-24700040 MS.gene033695:intron 30.0%
! GGCAAGAATTTTACAAATCA+TGG - chr7.3:24701119-24701138 MS.gene033695:CDS 30.0%
! TATCTAATTTGAAGTCTCTG+AGG - chr7.3:24700400-24700419 MS.gene033695:intron 30.0%
!!! GATTTTTTGTTGCTTTTAGC+TGG - chr7.3:24700216-24700235 MS.gene033695:intron 30.0%
AAATGAAGGACATTGAGTGA+TGG + chr7.3:24700168-24700187 None:intergenic 35.0%
AAGCTAATAAAACAGCAAGC+AGG + chr7.3:24701272-24701291 None:intergenic 35.0%
AATCATCGTAAAGCTCCAAT+CGG + chr7.3:24700815-24700834 None:intergenic 35.0%
AGATGATGAAGAAAATTGGG+TGG - chr7.3:24700987-24701006 MS.gene033695:CDS 35.0%
ATCAAGGTTCATCCATTGTA+CGG - chr7.3:24701464-24701483 MS.gene033695:CDS 35.0%
ATCACTCAATGTCCTTCATT+TGG - chr7.3:24700167-24700186 MS.gene033695:intron 35.0%
ATTGGAGCTTTACGATGATT+GGG - chr7.3:24700815-24700834 MS.gene033695:CDS 35.0%
CATGAATAGTGCAAGTTCTA+AGG + chr7.3:24701047-24701066 None:intergenic 35.0%
CGAAAGACACACTATCAAAT+TGG + chr7.3:24700728-24700747 None:intergenic 35.0%
CGGGACAAATTATGAAAGAT+AGG + chr7.3:24700795-24700814 None:intergenic 35.0%
CTTCATCATCATCATCATCA+AGG + chr7.3:24700017-24700036 None:intergenic 35.0%
GAGAATACCAACAGGTAATT+TGG + chr7.3:24700052-24700071 None:intergenic 35.0%
TCAACATCTCGAACTTTACA+AGG - chr7.3:24700875-24700894 MS.gene033695:CDS 35.0%
TGTGTCTTTCGACATAATTC+AGG - chr7.3:24700737-24700756 MS.gene033695:CDS 35.0%
! CATGGAAATCTGGAACAAAT+GGG - chr7.3:24701137-24701156 MS.gene033695:CDS 35.0%
! CTTTCATAATTTGTCCCGAT+TGG - chr7.3:24700797-24700816 MS.gene033695:CDS 35.0%
! TCATGGAAATCTGGAACAAA+TGG - chr7.3:24701136-24701155 MS.gene033695:CDS 35.0%
! TGCACTATTCATGACTTTTC+AGG - chr7.3:24701054-24701073 MS.gene033695:CDS 35.0%
!! AAGTTCTAAGGTATGATGAC+AGG + chr7.3:24701035-24701054 None:intergenic 35.0%
!!! TATGATCTAGCCTTACGTTT+TGG - chr7.3:24699910-24699929 MS.gene033695:intron 35.0%
AAAATTGTCCACTTGCCCAA+AGG - chr7.3:24701179-24701198 MS.gene033695:CDS 40.0%
AAGAATCGAAAGGCTTCACA+AGG + chr7.3:24700113-24700132 None:intergenic 40.0%
ACTCGTAGATGCTCAAGATT+TGG + chr7.3:24700246-24700265 None:intergenic 40.0%
AGATCACATCGTCCAAATGA+AGG + chr7.3:24700182-24700201 None:intergenic 40.0%
AGTTCGAGATGTTGAAGCTT+AGG + chr7.3:24700870-24700889 None:intergenic 40.0%
ATCATCGTAAAGCTCCAATC+GGG + chr7.3:24700814-24700833 None:intergenic 40.0%
CAAGCATTCTCTCAAAGAGA+TGG - chr7.3:24699716-24699735 MS.gene033695:intron 40.0%
GATTGGAGCTTTACGATGAT+TGG - chr7.3:24700814-24700833 MS.gene033695:CDS 40.0%
GCATTCACAACGTCAACAAA+TGG - chr7.3:24699932-24699951 MS.gene033695:intron 40.0%
GGAATACCCAAATTACCTGT+TGG - chr7.3:24700042-24700061 MS.gene033695:intron 40.0%
GGATAAGATCAGCAGTTTAC+CGG - chr7.3:24699639-24699658 MS.gene033695:CDS 40.0%
GGGTATATACTTCCATGATG+AGG - chr7.3:24700269-24700288 MS.gene033695:CDS 40.0%
GTACATGTGAGAATACCAAC+AGG + chr7.3:24700060-24700079 None:intergenic 40.0%
GTTCGAGATGTTGAAGCTTA+GGG + chr7.3:24700869-24700888 None:intergenic 40.0%
GTTGTGAATGCCAAAACGTA+AGG + chr7.3:24699923-24699942 None:intergenic 40.0%
TCAAGGTTCATCCATTGTAC+GGG - chr7.3:24701465-24701484 MS.gene033695:CDS 40.0%
! CATCTCTGGAAATTTACCGA+CGG - chr7.3:24699742-24699761 MS.gene033695:intron 40.0%
! GTTATTCACTGTGATGATGC+CGG + chr7.3:24699779-24699798 None:intergenic 40.0%
! TCTCTTTGAGAGAATGCTTG+TGG + chr7.3:24699716-24699735 None:intergenic 40.0%
ATCGATGAAATGAGAGCCAG+CGG + chr7.3:24699860-24699879 None:intergenic 45.0%
CTAACATAAGCTCGCTGTGT+AGG + chr7.3:24701080-24701099 None:intergenic 45.0%
CTTGAGCATCTACGAGTTGT+GGG - chr7.3:24700249-24700268 MS.gene033695:CDS 45.0%
GCGTATGGTGGTCAATACAA+TGG + chr7.3:24700625-24700644 None:intergenic 45.0%
TAAAAGTCGGCATGTTGCAG+AGG + chr7.3:24701205-24701224 None:intergenic 45.0%
TAGTCTCGCTGCACTAATGA+AGG - chr7.3:24701343-24701362 MS.gene033695:CDS 45.0%
TATTGACCACCATACGCTGA+AGG - chr7.3:24700628-24700647 MS.gene033695:intron 45.0%
TCTTGAGCATCTACGAGTTG+TGG - chr7.3:24700248-24700267 MS.gene033695:CDS 45.0%
! AGGTATGATGACAGGCATTG+AGG + chr7.3:24701027-24701046 None:intergenic 45.0%
! CAAAGAGATGGACTCATCTC+TGG - chr7.3:24699728-24699747 MS.gene033695:intron 45.0%
ACACTTGTAAGCCTCGACCT+CGG - chr7.3:24700081-24700100 MS.gene033695:intron 50.0%
ACCACCATACGCTGAAGGAA+TGG - chr7.3:24700633-24700652 MS.gene033695:intron 50.0%
ACCGACGGTATCAACTTCTC+CGG - chr7.3:24699757-24699776 MS.gene033695:intron 50.0%
AGACTTGATTGCACAGCCAC+AGG - chr7.3:24701506-24701525 MS.gene033695:CDS 50.0%
CAAGGCTATTCACACTGACG+TGG + chr7.3:24699999-24700018 None:intergenic 50.0%
CATACGCTGAAGGAATGGGA+TGG - chr7.3:24700638-24700657 MS.gene033695:intron 50.0%
CATCCCATTCCTTCAGCGTA+TGG + chr7.3:24700640-24700659 None:intergenic 50.0%
CCACCATACGCTGAAGGAAT+GGG - chr7.3:24700634-24700653 MS.gene033695:intron 50.0%
GACTTGATTGCACAGCCACA+GGG - chr7.3:24701507-24701526 MS.gene033695:CDS 50.0%
GCATACATGTGCCCGTACAA+TGG + chr7.3:24701479-24701498 None:intergenic 50.0%
GCGGATCTACTTCCTCATCA+TGG + chr7.3:24700284-24700303 None:intergenic 50.0%
GCTTTACGATGATTGGGAGG+TGG - chr7.3:24700821-24700840 MS.gene033695:CDS 50.0%
GGAGCTTTACGATGATTGGG+AGG - chr7.3:24700818-24700837 MS.gene033695:CDS 50.0%
GTTGAAGCTTAGGGCAGTGT+TGG + chr7.3:24700860-24700879 None:intergenic 50.0%
TGGCAACTGCCTCTTTGGTA+GGG + chr7.3:24699696-24699715 None:intergenic 50.0%
!! AGGCATTGAGGAACAAGCTC+TGG + chr7.3:24701015-24701034 None:intergenic 50.0%
ATCTTATCCACCGCTGGTGG+TGG + chr7.3:24699628-24699647 None:intergenic 55.0%
CCCATTCCTTCAGCGTATGG+TGG + chr7.3:24700637-24700656 None:intergenic 55.0%
CTGATCTTATCCACCGCTGG+TGG + chr7.3:24699631-24699650 None:intergenic 55.0%
CTGCTGATCTTATCCACCGC+TGG + chr7.3:24699634-24699653 None:intergenic 55.0%
GCTTCACAAGGAACCAACCG+AGG + chr7.3:24700101-24700120 None:intergenic 55.0%
GCTTGTGGCAACTGCCTCTT+TGG + chr7.3:24699701-24699720 None:intergenic 55.0%
GGCATGTTGCAGAGGCCTTT+GGG + chr7.3:24701197-24701216 None:intergenic 55.0%
GTCTCGTCTCCCTACCAAAG+AGG - chr7.3:24699684-24699703 MS.gene033695:intron 55.0%
GTGGCAACTGCCTCTTTGGT+AGG + chr7.3:24699697-24699716 None:intergenic 55.0%
TTACCGGACGCGATTCTGAG+CGG - chr7.3:24699655-24699674 MS.gene033695:intron 55.0%
TTGTAAGCCTCGACCTCGGT+TGG - chr7.3:24700085-24700104 MS.gene033695:intron 55.0%
!! GCCGGAGAAGTTGATACCGT+CGG + chr7.3:24699761-24699780 None:intergenic 55.0%
ATCCCGCTCAGAATCGCGTC+CGG + chr7.3:24699661-24699680 None:intergenic 60.0%
ATTGCACAGCCACAGGGCAG+AGG - chr7.3:24701513-24701532 MS.gene033695:CDS 60.0%
CAAGGAACCAACCGAGGTCG+AGG + chr7.3:24700095-24700114 None:intergenic 60.0%
CGGCATGTTGCAGAGGCCTT+TGG + chr7.3:24701198-24701217 None:intergenic 60.0%
TACCGGACGCGATTCTGAGC+GGG - chr7.3:24699656-24699675 MS.gene033695:intron 60.0%
TCATACACGCCTCTGCCCTG+TGG + chr7.3:24701525-24701544 None:intergenic 60.0%
TGCAGAGGCCTTTGGGCAAG+TGG + chr7.3:24701190-24701209 None:intergenic 60.0%
! GGGCAGTGTTGGAGCACTTG+CGG + chr7.3:24700849-24700868 None:intergenic 60.0%
!! AGAAGCACCACCACCACCAG+CGG - chr7.3:24699615-24699634 MS.gene033695:CDS 60.0%
!! TTATCCACCGCTGGTGGTGG+TGG + chr7.3:24699625-24699644 None:intergenic 60.0%
AGCACCACCACCACCAGCGG+TGG - chr7.3:24699618-24699637 MS.gene033695:CDS 70.0%
TTGGTCTCTCGCGACGCCGC+TGG - chr7.3:24699841-24699860 MS.gene033695:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 24699589 24701544 24699589 ID=MS.gene033695
chr7.3 mRNA 24699589 24701544 24699589 ID=MS.gene033695.t1;Parent=MS.gene033695
chr7.3 exon 24700666 24701544 24700666 ID=MS.gene033695.t1.exon1;Parent=MS.gene033695.t1
chr7.3 CDS 24700666 24701544 24700666 ID=cds.MS.gene033695.t1;Parent=MS.gene033695.t1
chr7.3 exon 24700237 24700374 24700237 ID=MS.gene033695.t1.exon2;Parent=MS.gene033695.t1
chr7.3 CDS 24700237 24700374 24700237 ID=cds.MS.gene033695.t1;Parent=MS.gene033695.t1
chr7.3 exon 24699589 24699669 24699589 ID=MS.gene033695.t1.exon3;Parent=MS.gene033695.t1
chr7.3 CDS 24699589 24699669 24699589 ID=cds.MS.gene033695.t1;Parent=MS.gene033695.t1
Gene Sequence

>MS.gene033695

ATGGGGCGACGGAGGAAGAGAATTTCAGAAGCACCACCACCACCAGCGGTGGATAAGATCAGCAGTTTACCGGACGCGATTCTGAGCGGGATTCTGTCTCGTCTCCCTACCAAAGAGGCAGTTGCCACAAGCATTCTCTCAAAGAGATGGACTCATCTCTGGAAATTTACCGACGGTATCAACTTCTCCGGCATCATCACAGTGAATAACATTGAATCTAATTACAGTTTAAATGAGTCTATATACTCAATTTTGGTCTCTCGCGACGCCGCTGGCTCTCATTTCATCGATAGTTTTAGTCTCGAAATTGAATATGGTAGTTATGATCTAGCCTTACGTTTTGGCATTCACAACGTCAACAAATGGATTAACTTCATTGTTCAACGCAAACTCAAGCATCTTCGTCTCCACGTCAGTGTGAATAGCCTTGATGATGATGATGATGAAGAATATGGAATACCCAAATTACCTGTTGGTATTCTCACATGTACAACACTTGTAAGCCTCGACCTCGGTTGGTTCCTTGTGAAGCCTTTCGATTCTTCTTCTATTAGATTTGGATTTGGATTTGGATTTCCATCACTCAATGTCCTTCATTTGGACGATGTGATCTTTGATGAACTTCAAGATTTTTTGTTGCTTTTAGCTGGATGTCCAAATCTTGAGCATCTACGAGTTGTGGGTATATACTTCCATGATGAGGAAGTAGATCCGCTATTCATTCAAGAGTTTAAAAGCTTTAGCTTACCAAAATTGATTAGTGCACATATCACTCATTGTTGTTTGTCTTCATATTTTCCGTTGAAAGCACTATCTAATTTGAAGTCTCTGAGGATAGATACATTCATGTTTCGCACAAAAGATCACAAATTCTTCCAGGTTCGTTTTATTTATTTATTTATTTATTGAGTATCATGCATTGCTACCTCAATCTATATAATACTGTCTGTGTCCAATATAACACAATTGATTACATTCAAAAATTTGATTACATTCAATAATTCCGTTTTCTCCAATTTGATTATATGTCAGTCCATTGTATTGACCACCATACGCTGAAGGAATGGGATGGAAAACAAAGCAAAAATGTGATTCATCTGCCATGTTTTTTCTTTTTTCTTTTTGTGAATTTTGCCCCAATTTGATAGTGTGTCTTTCGACATAATTCAGGCGAATCAGCTGCAACGCCGTTACGATGATATTCCTATCTTTCATAATTTGTCCCGATTGGAGCTTTACGATGATTGGGAGGTGGTACCGCAAGTGCTCCAACACTGCCCTAAGCTTCAACATCTCGAACTTTACAAGGTTTGTTAAGTCTAAGAAGTAAGAACCATATTCGGTTTATCTTTTCTTAACACACCTTAACTTTAGTTATGTGCAATATTAATAGGAAAAAGATGATGAAGAAAATTGGGTGGAACCAGAGCTTGTTCCTCAATGCCTGTCATCATACCTTAGAACTTGCACTATTCATGACTTTTCAGGCCTACACAGCGAGCTTATGTTAGCAAAATATATTTTGATGAAGGCAAGAATTTTACAAATCATGGAAATCTGGAACAAATGGGATGAACCTAAAATCAAAAGAAAATTGTCCACTTGCCCAAAGGCCTCTGCAACATGCCGACTTTTATTTTATTGATAACATATAGACTCTGTAAATAGTAGTTTCTCTATCCTGCTTGCTGTTTTATTAGCTTCTATTTGGTTGTTTGAACTTTGAACTATGAGTTATTATGAATGTCATGACTTAGTCTCGCTGCACTAATGAAGGAAAAATGATCTTTAAATGATTTATTAGTACTCATCTACCCTAACTTTTTATTTATATACATTTATGTATTTATTGAACCTGTTTATGACTTCAATTAGATCAAGGTTCATCCATTGTACGGGCACATGTATGCAAAATTCAGACTTGATTGCACAGCCACAGGGCAGAGGCGTGTATGA

Protein sequence

>MS.gene033695.t1

MGRRRKRISEAPPPPAVDKISSLPDAILSGILSRLPTKEAVATSILSKRWTHLWKFTDGINFSGIITVNNIESNYSLNESIYSILVSRDAAGSHFIDSFSLEIEYGSYDLALRFGIHNVNKWINFIVQRKLKHLRLHVSVNSLDDDDDEEYGIPKLPVGILTCTTLVSLDLGWFLVKPFDSSSIRFGFGFGFPSLNVLHLDDVIFDELQDFLLLLAGCPNLEHLRVVGIYFHDEEVDPLFIQEFKSFSLPKLISAHITHCCLSSYFPLKALSNLKSLRIDTFMFRTKDHKFFQANQLQRRYDDIPIFHNLSRLELYDDWEVVPQVLQHCPKLQHLELYKIKVHPLYGHMYAKFRLDCTATGQRRV