AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003675

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003675.t1 MTR_4g071090 98.333 840 12 1 1 838 1 840 0.0 1696
MS.gene003675.t1 MTR_8g090000 34.242 660 375 11 119 741 16 653 1.42e-115 371
MS.gene003675.t1 MTR_7g109480 39.726 584 313 13 228 800 144 699 7.90e-114 363
MS.gene003675.t1 MTR_2g437540 33.588 655 366 13 126 741 24 648 7.47e-111 358
MS.gene003675.t1 MTR_4g096700 33.739 658 357 13 141 746 17 647 2.78e-109 353
MS.gene003675.t1 MTR_4g116870 35.240 647 362 14 170 788 68 685 7.52e-106 342
MS.gene003675.t1 MTR_4g122270 34.370 611 347 10 152 737 238 819 1.13e-102 339
MS.gene003675.t1 MTR_7g100680 33.023 645 352 18 178 755 87 718 1.34e-91 306
MS.gene003675.t1 MTR_2g009190 31.188 606 364 15 168 746 41 620 1.95e-74 256
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003675.t1 AT2G16440 72.938 861 194 8 1 837 1 846 0.0 1237
MS.gene003675.t1 AT5G44635 34.483 696 390 15 94 755 2 665 4.00e-118 378
MS.gene003675.t1 AT5G44635 34.483 696 390 15 94 755 2 665 1.06e-117 377
MS.gene003675.t1 AT4G02060 37.713 586 324 12 227 800 141 697 1.20e-108 350
MS.gene003675.t1 AT4G02060 37.713 586 324 12 227 800 141 697 1.20e-108 350
MS.gene003675.t1 AT1G44900 34.202 652 354 16 121 737 210 821 8.86e-108 353
MS.gene003675.t1 AT1G44900 34.202 652 354 16 121 737 212 823 9.13e-108 353
MS.gene003675.t1 AT5G46280 31.776 642 373 9 149 746 19 639 2.59e-105 340
MS.gene003675.t1 AT2G07690 34.488 664 370 14 170 801 64 694 3.73e-105 340
MS.gene003675.t1 AT5G46280 31.776 642 373 9 149 746 19 639 2.49e-104 340
MS.gene003675.t1 AT2G07690 34.488 664 368 15 170 801 64 692 1.53e-103 336
MS.gene003675.t1 AT5G46280 32.045 621 357 9 149 725 19 618 2.84e-102 330
MS.gene003675.t1 AT5G46280 32.689 569 319 8 149 673 19 567 1.06e-94 308
MS.gene003675.t1 AT3G09660 33.389 596 329 18 216 755 131 714 1.76e-91 305
MS.gene003675.t1 AT3G09660 33.224 608 340 19 216 770 131 725 1.95e-91 306
MS.gene003675.t1 AT3G09660 33.061 611 340 19 216 770 131 728 4.43e-91 305
MS.gene003675.t1 AT2G14050 32.252 524 305 14 240 746 131 621 5.78e-69 241
MS.gene003675.t1 AT2G14050 32.252 524 305 14 240 746 131 621 1.00e-68 240

Find 230 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATAGCTTCCCTGATTTC+TGG 0.179319 4.1:+31810587 None:intergenic
TATACAGTTTCGCCTGTTTC+AGG 0.188846 4.1:+31808671 None:intergenic
TCATCAAATAAAACTTCTTC+TGG 0.231583 4.1:+31809165 None:intergenic
GGGACGTTCCATGCGGTTAT+TGG 0.232963 4.1:-31806955 MS.gene003675:CDS
CGCCGGTCCGACTTACGTTT+GGG 0.265978 4.1:-31811147 MS.gene003675:CDS
ATCATGGAGAAGATGCAAAT+TGG 0.278435 4.1:-31806978 MS.gene003675:CDS
CCGAATAATCATTCCCTTCA+TGG 0.292850 4.1:+31810625 None:intergenic
TTCGCCTGTTTCAGGATCTT+TGG 0.293183 4.1:+31808679 None:intergenic
GGTGGAGGCATTTCGGCTTC+TGG 0.293566 4.1:-31807210 MS.gene003675:CDS
GTCAGCCTTTCATAGATATC+TGG 0.298464 4.1:+31809028 None:intergenic
TATTGTTTCCCTGCACTATA+AGG 0.304910 4.1:-31807788 MS.gene003675:CDS
TTGTGGGTGTATGTACTTTC+GGG 0.313383 4.1:+31807606 None:intergenic
ATGAGGAATTTGAATCCTTC+TGG 0.314341 4.1:-31810771 MS.gene003675:intron
GACGGCGGCGACGGCGGCCG+GGG 0.319854 4.1:+31811363 None:intergenic
AGTCACTGGCGCCAAACATC+TGG 0.319935 4.1:-31809003 MS.gene003675:CDS
TGATGATTTGGATATGGATT+TGG 0.321742 4.1:-31811036 MS.gene003675:CDS
TTGACGGCGGCGACGGCGGC+CGG 0.323649 4.1:+31811361 None:intergenic
AACAAGTGTCATCGAATTCT+TGG 0.324058 4.1:+31810378 None:intergenic
TTACCTCTCTCCACCGGAAC+CGG 0.337220 4.1:+31810533 None:intergenic
ACGCCGGTCCGACTTACGTT+TGG 0.343710 4.1:-31811148 MS.gene003675:CDS
TGACGGCGGCGACGGCGGCC+GGG 0.349028 4.1:+31811362 None:intergenic
TGGTGATGATGATTTGGATA+TGG 0.355491 4.1:-31811042 MS.gene003675:CDS
CGCGGTGGTGGCATCCCTTC+CGG 0.361418 4.1:-31811254 MS.gene003675:CDS
GCTCGATTATACCAGAAATC+AGG 0.362038 4.1:-31810598 MS.gene003675:CDS
TAAACAAATTGTGAGGCTTC+AGG 0.364258 4.1:-31809637 MS.gene003675:CDS
ATTCTCCTTGTTGGTGATCC+TGG 0.367312 4.1:-31808806 MS.gene003675:CDS
CTTCTTCTGGATTTCTGCCC+TGG 0.368125 4.1:+31809178 None:intergenic
GATCAAACAGGTTATTGAAT+TGG 0.373428 4.1:-31810988 MS.gene003675:CDS
GTTGTGGGTGTATGTACTTT+CGG 0.374330 4.1:+31807605 None:intergenic
ATTCTGCTCTGACCCGGTTC+CGG 0.375919 4.1:-31810546 MS.gene003675:CDS
GTGTGAGGCGTTCCTCCTTC+AGG 0.376780 4.1:+31809597 None:intergenic
TCATGGAGAAGATGCAAATT+GGG 0.382324 4.1:-31806977 MS.gene003675:CDS
TCAAGGTGGTGATGATGATT+TGG 0.385708 4.1:-31811048 MS.gene003675:CDS
ATGATGTGGTGGAGGCATTT+CGG 0.391101 4.1:-31807217 MS.gene003675:CDS
GTTTGGATAACTACCAGTTC+TGG 0.391486 4.1:+31807157 None:intergenic
CATGACAAACTGGTGGATAC+TGG 0.399287 4.1:-31809558 MS.gene003675:CDS
AATTTACTTAATGCTTGATA+AGG 0.399930 4.1:-31807845 MS.gene003675:CDS
TCTGTTCGGTTGAGGAGTTC+CGG 0.403298 4.1:+31811325 None:intergenic
GTCGTAACCGTCACCGCCTT+CGG 0.403939 4.1:+31811178 None:intergenic
CTTGCTATTGCATGACAAAC+TGG 0.407456 4.1:-31809568 MS.gene003675:CDS
GCTGCTGATGAATTGATTAC+AGG 0.407975 4.1:-31807571 MS.gene003675:CDS
TCTCATAACTACTGGTGTTT+CGG 0.408833 4.1:-31807051 MS.gene003675:CDS
ATCAGGTGACTGGTATATAC+AGG 0.409169 4.1:-31809434 MS.gene003675:intron
GTTGGCAATTGGACTTGAAT+TGG 0.411791 4.1:+31811397 None:intergenic
ATTCTCCGGAAGTAGCAAAA+AGG 0.412222 4.1:-31807521 MS.gene003675:intron
ACGGCGGCGACGGCGGCCGG+GGG 0.414613 4.1:+31811364 None:intergenic
GTGCAGGGAAACAATATGTT+TGG 0.417678 4.1:+31807795 None:intergenic
TATACAGGGCTATGAGTGTC+AGG 0.419389 4.1:-31809419 MS.gene003675:CDS
CCATGAAGGGAATGATTATT+CGG 0.419432 4.1:-31810625 MS.gene003675:CDS
GAGGTGGAAGTTGGTGTGGC+GGG 0.419704 4.1:+31811221 None:intergenic
GAGGAGTAGGTGTTGGCAAT+TGG 0.421375 4.1:+31811386 None:intergenic
ATATTCAGGTGTCTAGTTTG+TGG 0.426233 4.1:-31810569 MS.gene003675:CDS
AATGCTTTGAAGTTGGCATC+TGG 0.429342 4.1:-31808854 MS.gene003675:CDS
TCCCGCCACCGTCGCGGTGG+TGG 0.432205 4.1:-31811266 MS.gene003675:CDS
TCATCTAGCTCCCAGATGTT+TGG 0.433147 4.1:+31808992 None:intergenic
GCGGGGACACGGCGGCCGGA+AGG 0.434368 4.1:+31811239 None:intergenic
TGCCACCACCGCGACGGTGG+CGG 0.435280 4.1:+31811264 None:intergenic
AAGTTGGTGTGGCGGGGACA+CGG 0.438937 4.1:+31811228 None:intergenic
GAAGGATTTGTTTCCATGGC+TGG 0.441340 4.1:-31806665 MS.gene003675:CDS
TAGCATCCTCAACCAGCATC+CGG 0.442650 4.1:+31809217 None:intergenic
CACCGAAGTCCTTGCATTGA+GGG 0.444534 4.1:+31808257 None:intergenic
CCTCATAATCCTTATAGTGC+AGG 0.451180 4.1:+31807779 None:intergenic
CAGCTTCATCTGATAGTTGT+GGG 0.452578 4.1:+31807590 None:intergenic
CGACGGTGGCGGGAGGGAGT+TGG 0.457250 4.1:+31811275 None:intergenic
GCCACCACCGCGACGGTGGC+GGG 0.457308 4.1:+31811265 None:intergenic
GACATCAAAGTCCCGGATGC+TGG 0.459233 4.1:-31809229 MS.gene003675:CDS
CGGGGACACGGCGGCCGGAA+GGG 0.461290 4.1:+31811240 None:intergenic
TACCTCGGTCGCTCAAAACT+AGG 0.463388 4.1:+31808551 None:intergenic
AAATCAGGGAAGCTATATTC+AGG 0.467213 4.1:-31810583 MS.gene003675:CDS
TTGAGAAGCATGTTCAAACT+AGG 0.467291 4.1:-31810821 MS.gene003675:CDS
TGAACATGCTTCTCAAACAT+AGG 0.467836 4.1:+31810828 None:intergenic
GCATCTGGCGCTAGCTTTCG+TGG 0.468482 4.1:-31808839 MS.gene003675:CDS
GGAATCCATTGGAGTGGAAT+CGG 0.468602 4.1:+31811545 None:intergenic
GAAGTGATACGAACCATTGT+TGG 0.469083 4.1:+31811524 None:intergenic
TTAAGATGAATTTCGCTGCC+AGG 0.469150 4.1:+31806818 None:intergenic
CAGCGAAGGATTTGTTTCCA+TGG 0.470604 4.1:-31806669 MS.gene003675:CDS
TGATTGATTGACGGCGGCGA+CGG 0.471280 4.1:+31811354 None:intergenic
GATATAAATATTCTCCTTGT+TGG 0.474086 4.1:-31808815 MS.gene003675:CDS
TCGGATTCGCTTCTCAGAAT+CGG 0.474303 4.1:-31807329 MS.gene003675:intron
CCTCCTTCAGGTATCTCGTC+AGG 0.476130 4.1:+31809609 None:intergenic
GTGGCCAAAGATCCTGAAAC+AGG 0.477237 4.1:-31808683 MS.gene003675:CDS
GGATTATATCGTGAACCGCT+AGG 0.481496 4.1:+31808219 None:intergenic
CCTGCACTATAAGGATTATG+AGG 0.483526 4.1:-31807779 MS.gene003675:intron
CAATGCAAGGACTTCGGTGT+TGG 0.484227 4.1:-31808253 MS.gene003675:CDS
TGAACCTACTGTTTGCTTGA+GGG 0.484828 4.1:-31810413 MS.gene003675:CDS
AAAGAAAGGTCTTCTTTGCC+AGG 0.485292 4.1:-31808966 MS.gene003675:intron
GGCATTTACACCAGTGGAAG+GGG 0.488022 4.1:-31808734 MS.gene003675:CDS
GATTATATCGTGAACCGCTA+GGG 0.498770 4.1:+31808220 None:intergenic
GTATGAGAAGTTGATCAAAC+AGG 0.500686 4.1:-31811000 MS.gene003675:CDS
TTGTGGATTCTGCTCTGACC+CGG 0.500697 4.1:-31810552 MS.gene003675:CDS
GATATGGATTTGGATATTGA+AGG 0.501917 4.1:-31811026 MS.gene003675:CDS
GACATGGATCTCATAACTAC+TGG 0.502893 4.1:-31807059 MS.gene003675:CDS
GGACTTGAATTGGAATTGTC+CGG 0.506755 4.1:+31811407 None:intergenic
GAACCATTGTTGGAATCCAT+TGG 0.507852 4.1:+31811534 None:intergenic
CATAGGAAAGTCTTCGGAGG+TGG 0.508882 4.1:+31811205 None:intergenic
TGTGGCGGGGACACGGCGGC+CGG 0.509446 4.1:+31811235 None:intergenic
AATAGACTCTCAATCTGCCT+TGG 0.512928 4.1:+31807373 None:intergenic
GACTTAACAGTTCTCTGAGT+TGG 0.513256 4.1:+31809390 None:intergenic
GGCTTCCGATTCCACTCCAA+TGG 0.513615 4.1:-31811550 MS.gene003675:CDS
ATGTCTTCCGAAGGCGGTGA+CGG 0.514504 4.1:-31811185 MS.gene003675:CDS
CCGGTCCGACTTACGTTTGG+GGG 0.515188 4.1:-31811145 MS.gene003675:CDS
AAGCGAGATCTGTTCGGTTG+AGG 0.515557 4.1:+31811317 None:intergenic
TGAGAGGATGGTATCCATGA+AGG 0.515734 4.1:-31810639 MS.gene003675:CDS
AGACACTCGCAACATGATCA+TGG 0.516681 4.1:-31806994 MS.gene003675:CDS
GTTGTCAATGACAGACAAGC+GGG 0.516945 4.1:+31808197 None:intergenic
ACGTTCCATGCGGTTATTGG+AGG 0.517993 4.1:-31806952 MS.gene003675:intron
CTGGTGGATACTGGAAAGCC+AGG 0.518819 4.1:-31809549 MS.gene003675:CDS
TTCCCTCAATGCAAGGACTT+CGG 0.519427 4.1:-31808259 MS.gene003675:CDS
GTAGCGAAGCGAGATCTGTT+CGG 0.521858 4.1:+31811311 None:intergenic
AATTAATTAACAGGTAATAA+CGG 0.521998 4.1:-31807401 MS.gene003675:intron
CATGGAAACAAATCCTTCGC+TGG 0.526272 4.1:+31806670 None:intergenic
TATGGAGGTTGACAATGGCC+AGG 0.526806 4.1:-31809196 MS.gene003675:CDS
ATTACGACTTAGTGAAGCAT+TGG 0.527011 4.1:-31807353 MS.gene003675:CDS
GGAAGACATAGGAAAGTCTT+CGG 0.527650 4.1:+31811199 None:intergenic
TTTGTTGTATATCAGGTGAC+TGG 0.529577 4.1:-31809444 MS.gene003675:intron
AGCTGCGACTTGCTTGTACC+AGG 0.531962 4.1:+31808788 None:intergenic
CGGATGGAGTGATTGATTGA+CGG 0.532588 4.1:+31811345 None:intergenic
TTTCGGCAAGCGAAAGGATG+AGG 0.535401 4.1:-31807034 MS.gene003675:CDS
CGTCAATCAATCACTCCATC+CGG 0.536330 4.1:-31811344 MS.gene003675:CDS
GAACATGGAGCAGGATGTGT+TGG 0.537785 4.1:-31807662 MS.gene003675:CDS
GGAGGTGGAAGTTGGTGTGG+CGG 0.538345 4.1:+31811220 None:intergenic
TACCTCTCTCCACCGGAACC+GGG 0.539167 4.1:+31810534 None:intergenic
TAAGATGAATTTCGCTGCCA+GGG 0.539727 4.1:+31806819 None:intergenic
TTGGAATTGTCCGGTGAAGA+GGG 0.540807 4.1:+31811416 None:intergenic
AGCCACAGACTTACTTGCAT+CGG 0.543317 4.1:+31810350 None:intergenic
CTGCTCTGACCCGGTTCCGG+TGG 0.545661 4.1:-31810543 MS.gene003675:CDS
GCAGCTTCATCTGATAGTTG+TGG 0.546328 4.1:+31807589 None:intergenic
TCTGCAATGGATACCAGAAC+TGG 0.546883 4.1:-31807170 MS.gene003675:intron
TCACGAATTGTATAGTAAGA+TGG 0.547022 4.1:-31810919 MS.gene003675:CDS
CTGAACCTACTGTTTGCTTG+AGG 0.548909 4.1:-31810414 MS.gene003675:CDS
CTCACCTCAACTCTGTCACC+TGG 0.549979 4.1:+31809531 None:intergenic
ACCACCGCGACGGTGGCGGG+AGG 0.550039 4.1:+31811268 None:intergenic
AGGGGTAGGGGAAAATTCTC+CGG 0.554199 4.1:-31807535 MS.gene003675:CDS
TGGAGTGGAATCGGAAGCCA+TGG 0.554448 4.1:+31811554 None:intergenic
CTCGATTATACCAGAAATCA+GGG 0.554479 4.1:-31810597 MS.gene003675:CDS
CTCATAATCCTTATAGTGCA+GGG 0.554579 4.1:+31807780 None:intergenic
AGCATCCTCAACCAGCATCC+GGG 0.555444 4.1:+31809218 None:intergenic
AAACAGGTTATTGAATTGGA+AGG 0.555576 4.1:-31810984 MS.gene003675:CDS
TTCGGTTGAGGAGTTCCGGA+TGG 0.556982 4.1:+31811329 None:intergenic
AAGTCTTCGGAGGTGGAAGT+TGG 0.558625 4.1:+31811212 None:intergenic
AGGTGGAAGTTGGTGTGGCG+GGG 0.559665 4.1:+31811222 None:intergenic
GTCACTGGCGCCAAACATCT+GGG 0.560062 4.1:-31809002 MS.gene003675:CDS
GAGCTAGATGATGTAAAGAA+AGG 0.560591 4.1:-31808980 MS.gene003675:CDS
GATGCTGGTTGAGGATGCTA+TGG 0.564286 4.1:-31809214 MS.gene003675:CDS
AATCTTCAGGTTCTTGAGAG+TGG 0.565854 4.1:-31808577 MS.gene003675:intron
ACACCGAAGTCCTTGCATTG+AGG 0.566072 4.1:+31808256 None:intergenic
GGAGGGAGTTGGAGTTGCAT+CGG 0.568396 4.1:+31811286 None:intergenic
ATGTTTGGCAAGTCGTCGGT+CGG 0.570550 4.1:+31807810 None:intergenic
GCCAACACCTACTCCTCCCC+CGG 0.570982 4.1:-31811380 MS.gene003675:CDS
GACTTAGTGAAGCATTGGCT+CGG 0.572654 4.1:-31807348 MS.gene003675:CDS
CTTCACAGGAACTATTGACA+TGG 0.572711 4.1:-31807075 MS.gene003675:intron
GAGAGGATGGTATCCATGAA+GGG 0.572804 4.1:-31810638 MS.gene003675:CDS
AAAGTCCCGGATGCTGGTTG+AGG 0.573038 4.1:-31809223 MS.gene003675:CDS
GCCGGTCCGACTTACGTTTG+GGG 0.574067 4.1:-31811146 MS.gene003675:CDS
TTGATTGACGGCGGCGACGG+CGG 0.576601 4.1:+31811357 None:intergenic
ATAATTGCAGAACATGGAGC+AGG 0.578019 4.1:-31807671 MS.gene003675:intron
ACCTCGGTCGCTCAAAACTA+GGG 0.578032 4.1:+31808552 None:intergenic
ACTCCCTCCCGCCACCGTCG+CGG 0.578910 4.1:-31811272 MS.gene003675:CDS
ACTCCAATGGATTCCAACAA+TGG 0.580647 4.1:-31811537 MS.gene003675:intron
CTGGTGTTTCGGCAAGCGAA+AGG 0.580745 4.1:-31807040 MS.gene003675:CDS
GACTTTCCTATGTCTTCCGA+AGG 0.581474 4.1:-31811194 MS.gene003675:CDS
TGCAATGCAGCAATCTGCAA+TGG 0.581576 4.1:-31807183 MS.gene003675:CDS
ACAAACTGTTTCAATAGCAA+AGG 0.582486 4.1:-31808295 MS.gene003675:CDS
ACAAAATGTCTGACAATGCA+AGG 0.583185 4.1:-31808507 MS.gene003675:CDS
CAATATGTTTGGCAAGTCGT+CGG 0.583594 4.1:+31807806 None:intergenic
ATATGGATTTGGATATTGAA+GGG 0.585173 4.1:-31811025 MS.gene003675:CDS
AGGTAATAACGGCAACTCCA+AGG 0.585966 4.1:-31807390 MS.gene003675:CDS
ATTGGAATTGTCCGGTGAAG+AGG 0.586447 4.1:+31811415 None:intergenic
GTTGCTACTCTCGCCAGCGA+AGG 0.586679 4.1:-31806683 MS.gene003675:CDS
TGAAAGGCTGACAAAGTCAC+TGG 0.588015 4.1:-31809017 MS.gene003675:CDS
CCCTCCCGCCACCGTCGCGG+TGG 0.591879 4.1:-31811269 MS.gene003675:CDS
ATGTGAATGATGCGATTCAG+AGG 0.592525 4.1:-31811103 MS.gene003675:CDS
GACCCGGTTCCGGTGGAGAG+AGG 0.592602 4.1:-31810536 MS.gene003675:intron
TGGCATTTACACCAGTGGAA+GGG 0.592837 4.1:-31808735 MS.gene003675:CDS
ACTGTTTCAATAGCAAAGGC+AGG 0.593633 4.1:-31808291 MS.gene003675:CDS
ATTGTTGGAATCCATTGGAG+TGG 0.594571 4.1:+31811539 None:intergenic
AACAACCAGATATCTATGAA+AGG 0.595448 4.1:-31809033 MS.gene003675:CDS
TCACCGCCTTCGGAAGACAT+AGG 0.595656 4.1:+31811188 None:intergenic
GGTTGGATTGACTGCTTACG+TGG 0.597160 4.1:-31808702 MS.gene003675:CDS
TTCGGAGGTGGAAGTTGGTG+TGG 0.598589 4.1:+31811217 None:intergenic
CCACGTGGCATTTACACCAG+TGG 0.599464 4.1:-31808740 MS.gene003675:CDS
CATGGAGAAGATGCAAATTG+GGG 0.599489 4.1:-31806976 MS.gene003675:CDS
TTATTGCTTCCCTCAATGCA+AGG 0.600052 4.1:-31808266 MS.gene003675:CDS
GGATGCCACCACCGCGACGG+TGG 0.601265 4.1:+31811261 None:intergenic
GTCTCAGGTGGCTAAACTGA+AGG 0.601377 4.1:-31809065 MS.gene003675:intron
TGGACAAAAGAGTGGGAGGA+AGG 0.601830 4.1:+31808169 None:intergenic
GAACTAAAGAATCAGAGCCC+TGG 0.602624 4.1:-31806836 MS.gene003675:CDS
GCTGGTTGAGGATGCTATGG+AGG 0.604167 4.1:-31809211 MS.gene003675:CDS
TTTCCTATGTCTTCCGAAGG+CGG 0.605752 4.1:-31811191 MS.gene003675:CDS
GGGAGTTGGAGTTGCATCGG+AGG 0.605920 4.1:+31811289 None:intergenic
AGGCGGTGACGGTTACGACA+TGG 0.606889 4.1:-31811174 MS.gene003675:CDS
GTGGCATTTACACCAGTGGA+AGG 0.610034 4.1:-31808736 MS.gene003675:CDS
TTACTGATAAACAAATTGTG+AGG 0.611797 4.1:-31809644 MS.gene003675:CDS
CCACCGCGACGGTGGCGGGA+GGG 0.613293 4.1:+31811269 None:intergenic
ATGGAGGTTGACAATGGCCA+GGG 0.614550 4.1:-31809195 MS.gene003675:CDS
TTGGTGTGGCGGGGACACGG+CGG 0.616538 4.1:+31811231 None:intergenic
GGGGACTAACATTAGTGTGG+AGG 0.622648 4.1:-31811126 MS.gene003675:CDS
AACTAACCTGGACAAAAGAG+TGG 0.626323 4.1:+31808161 None:intergenic
AAGGGATGCCACCACCGCGA+CGG 0.628305 4.1:+31811258 None:intergenic
GTGTAATTACCTCTCTCCAC+CGG 0.632724 4.1:+31810527 None:intergenic
CATCAATGCAACAGATACCT+CGG 0.632974 4.1:+31808536 None:intergenic
AAAATGGCAAGCACCTCGAG+AGG 0.640166 4.1:+31810888 None:intergenic
AAAGCCAGGTGACAGAGTTG+AGG 0.641668 4.1:-31809535 MS.gene003675:intron
TCTTCCCTCAAGCAAACAGT+AGG 0.642149 4.1:+31810409 None:intergenic
TCAGGTGACTGGTATATACA+GGG 0.649445 4.1:-31809433 MS.gene003675:intron
AACCTGGACAAAAGAGTGGG+AGG 0.651252 4.1:+31808165 None:intergenic
TAATACCTCCAATAACCGCA+TGG 0.653841 4.1:+31806947 None:intergenic
TTGGCTTGCGCAAACCCTAG+CGG 0.658205 4.1:-31808234 MS.gene003675:CDS
ACTAACCTGGACAAAAGAGT+GGG 0.661844 4.1:+31808162 None:intergenic
ACACCTGACGAGATACCTGA+AGG 0.663788 4.1:-31809612 MS.gene003675:CDS
GATGGTGAGGTATCCTCTCG+AGG 0.666004 4.1:-31810901 MS.gene003675:CDS
TTAAGAGCTCAACTTCAATG+AGG 0.667900 4.1:-31810788 MS.gene003675:CDS
AATAGCAAGCTAACAGTGTG+AGG 0.667908 4.1:+31809582 None:intergenic
GCTATTGCATGACAAACTGG+TGG 0.668028 4.1:-31809565 MS.gene003675:CDS
TGTTGTCAATGACAGACAAG+CGG 0.675119 4.1:+31808196 None:intergenic
AATTGTATAGTAAGATGGTG+AGG 0.675670 4.1:-31810914 MS.gene003675:CDS
ATACAGGGCTATGAGTGTCA+GGG 0.676940 4.1:-31809418 MS.gene003675:CDS
TTGTACCAGGATCACCAACA+AGG 0.678899 4.1:+31808801 None:intergenic
GCATTTACACCAGTGGAAGG+GGG 0.685959 4.1:-31808733 MS.gene003675:CDS
AGGGCTATGAGTGTCAGGGT+AGG 0.695713 4.1:-31809414 MS.gene003675:CDS
ATGGAGTGATTGATTGACGG+CGG 0.697982 4.1:+31811348 None:intergenic
AGACATAGGAAAGTCTTCGG+AGG 0.703963 4.1:+31811202 None:intergenic
GATGCTATGGAGGTTGACAA+TGG 0.706325 4.1:-31809201 MS.gene003675:CDS
TTGTCAATGACAGACAAGCG+GGG 0.713062 4.1:+31808198 None:intergenic
CCTGACGAGATACCTGAAGG+AGG 0.715290 4.1:-31809609 MS.gene003675:CDS
ATGGAGAAGATGCAAATTGG+GGG 0.717552 4.1:-31806975 MS.gene003675:CDS
TGCAAGGAGCATGTTACACG+AGG 0.719897 4.1:-31808491 MS.gene003675:intron
CCACTGGTGTAAATGCCACG+TGG 0.732070 4.1:+31808740 None:intergenic
GGTTACGACATGGATGACGC+CGG 0.737367 4.1:-31811164 MS.gene003675:CDS
ATACACAAACTTTCTCCACG+TGG 0.768452 4.1:-31808755 MS.gene003675:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTCTCTTTAAAAATAAA+TGG - chr4.1:31810258-31810277 MS.gene003675:intron 10.0%
!! AATTAATTAACAGGTAATAA+CGG - chr4.1:31810794-31810813 MS.gene003675:CDS 15.0%
!! TTAGTCATATATAGTTTATT+TGG + chr4.1:31811090-31811109 None:intergenic 15.0%
!! AAAAATAATCTCAAAGGTAA+GGG + chr4.1:31811412-31811431 None:intergenic 20.0%
!! AATAATCAATTTGATCTAGA+AGG - chr4.1:31808295-31808314 MS.gene003675:CDS 20.0%
!! AATTTACTTAATGCTTGATA+AGG - chr4.1:31810350-31810369 MS.gene003675:intron 20.0%
!! ACATATCATACATAATGTAA+GGG + chr4.1:31808029-31808048 None:intergenic 20.0%
!! CTATCTATCAATTAATTAAC+AGG - chr4.1:31810785-31810804 MS.gene003675:CDS 20.0%
!! CTGTTAATTAATTGATAGAT+AGG + chr4.1:31810787-31810806 None:intergenic 20.0%
!! TAAAAATAATCTCAAAGGTA+AGG + chr4.1:31811413-31811432 None:intergenic 20.0%
!! TACATATCATACATAATGTA+AGG + chr4.1:31808030-31808049 None:intergenic 20.0%
!!! ACTAAATGTTTTAGAAAGAA+TGG + chr4.1:31811274-31811293 None:intergenic 20.0%
!!! AGTTTTATTTGATGAAGAAA+AGG - chr4.1:31809038-31809057 MS.gene003675:CDS 20.0%
! AACATATCTTCTCTAATTTC+AGG - chr4.1:31808527-31808546 MS.gene003675:CDS 25.0%
! AATAATCATTTGAACTGTAC+TGG - chr4.1:31808370-31808389 MS.gene003675:intron 25.0%
! ACTGGTAAAAATAATCTCAA+AGG + chr4.1:31811418-31811437 None:intergenic 25.0%
! ATAATCATTTGAACTGTACT+GGG - chr4.1:31808371-31808390 MS.gene003675:intron 25.0%
! ATATACAACAAAACACTCAT+GGG + chr4.1:31808743-31808762 None:intergenic 25.0%
! ATATGGATTTGGATATTGAA+GGG - chr4.1:31807170-31807189 MS.gene003675:intron 25.0%
! ATATGTTAATTGCAGTTTCA+AGG + chr4.1:31808514-31808533 None:intergenic 25.0%
! ATGAAAACCCTAAAAAATAG+AGG + chr4.1:31810159-31810178 None:intergenic 25.0%
! CAAAACACATTGTTCAAAAT+AGG + chr4.1:31808440-31808459 None:intergenic 25.0%
! CATCAAAACCATATCAAAAA+TGG + chr4.1:31807326-31807345 None:intergenic 25.0%
! GAATGATATTTGATGTTGAA+GGG - chr4.1:31807961-31807980 MS.gene003675:intron 25.0%
! GATATAAATATTCTCCTTGT+TGG - chr4.1:31809380-31809399 MS.gene003675:CDS 25.0%
! GTCATATATAGTTTATTTGG+TGG + chr4.1:31811087-31811106 None:intergenic 25.0%
! TAAGTCATTGTTCAAAGTAT+GGG - chr4.1:31808822-31808841 MS.gene003675:CDS 25.0%
! TAGAAATCTGAATAAGAAGA+TGG + chr4.1:31806711-31806730 None:intergenic 25.0%
! TCATCAAATAAAACTTCTTC+TGG + chr4.1:31809033-31809052 None:intergenic 25.0%
! TGAATGATATTTGATGTTGA+AGG - chr4.1:31807960-31807979 MS.gene003675:intron 25.0%
! TTAAGTCATTGTTCAAAGTA+TGG - chr4.1:31808821-31808840 MS.gene003675:CDS 25.0%
! TTACTGATAAACAAATTGTG+AGG - chr4.1:31808551-31808570 MS.gene003675:CDS 25.0%
!! GTAAAAAATTACCCGATTTT+AGG + chr4.1:31808275-31808294 None:intergenic 25.0%
!! TTATTTTCTTGCAGCTTTTT+GGG - chr4.1:31809315-31809334 MS.gene003675:intron 25.0%
!! TTTTTCTACAAAACTTTGCA+TGG - chr4.1:31809776-31809795 MS.gene003675:intron 25.0%
!!! AAGCTTCTTTTAGCTTTTTT+CGG - chr4.1:31807999-31808018 MS.gene003675:intron 25.0%
!!! ATTTGAGTTGATCTTTTTTC+TGG - chr4.1:31810315-31810334 MS.gene003675:intron 25.0%
!!! ATTTTGAAACCCTATTTTTC+AGG - chr4.1:31806755-31806774 MS.gene003675:intron 25.0%
!!! ATTTTTTCTGCTAAATCTTC+AGG - chr4.1:31809605-31809624 MS.gene003675:CDS 25.0%
!!! CTATTTTTTATCTGCAAATC+AGG + chr4.1:31810916-31810935 None:intergenic 25.0%
!!! TAGTTCTATATTTTGACTGT+TGG - chr4.1:31807919-31807938 MS.gene003675:intron 25.0%
!!! TGATTTTTGAGTTGATGATT+TGG - chr4.1:31807891-31807910 MS.gene003675:intron 25.0%
!!! TTTATTTTCTTGCAGCTTTT+TGG - chr4.1:31809314-31809333 MS.gene003675:intron 25.0%
!!! TTTGTTTTGAAGATATTGAG+AGG - chr4.1:31807540-31807559 MS.gene003675:CDS 25.0%
AAAAACTACTATTAACCTGC+TGG - chr4.1:31808204-31808223 MS.gene003675:CDS 30.0%
AAACAGGTTATTGAATTGGA+AGG - chr4.1:31807211-31807230 MS.gene003675:CDS 30.0%
AAATGCAAATGAGTTTGAGA+AGG + chr4.1:31808851-31808870 None:intergenic 30.0%
AACAACCAGATATCTATGAA+AGG - chr4.1:31809162-31809181 MS.gene003675:CDS 30.0%
AATAATGTCTGCCTAAAATC+GGG - chr4.1:31808261-31808280 MS.gene003675:CDS 30.0%
AATTGTATAGTAAGATGGTG+AGG - chr4.1:31807281-31807300 MS.gene003675:intron 30.0%
ACAAACTGTTTCAATAGCAA+AGG - chr4.1:31809900-31809919 MS.gene003675:intron 30.0%
ACAGGCTATGTAAAAATAAG+GGG - chr4.1:31810642-31810661 MS.gene003675:CDS 30.0%
ACATTATTGAATCACCATAC+TGG + chr4.1:31808249-31808268 None:intergenic 30.0%
ATAAACAGAGACAAGTGTAT+TGG + chr4.1:31809864-31809883 None:intergenic 30.0%
ATAGTTCCTGTGAAGATAAA+AGG + chr4.1:31811115-31811134 None:intergenic 30.0%
CAATAATGTCTGCCTAAAAT+CGG - chr4.1:31808260-31808279 MS.gene003675:CDS 30.0%
CATTAGTTCACTTATCCTTA+GGG + chr4.1:31811458-31811477 None:intergenic 30.0%
CTAATGTACAAGAAATGCAA+TGG - chr4.1:31809576-31809595 MS.gene003675:CDS 30.0%
CTATGTAAAAATAAGGGGTA+GGG - chr4.1:31810647-31810666 MS.gene003675:intron 30.0%
CTATTTATCAGAGTATGTCA+TGG + chr4.1:31808696-31808715 None:intergenic 30.0%
GATATACAACAAAACACTCA+TGG + chr4.1:31808744-31808763 None:intergenic 30.0%
GATATGGATTTGGATATTGA+AGG - chr4.1:31807169-31807188 MS.gene003675:intron 30.0%
GATCAAACAGGTTATTGAAT+TGG - chr4.1:31807207-31807226 MS.gene003675:CDS 30.0%
GTGGAATACAATAGAGTATA+GGG + chr4.1:31811068-31811087 None:intergenic 30.0%
GTTGTTTGACAAATATTCTG+AGG - chr4.1:31809282-31809301 MS.gene003675:intron 30.0%
TAAAAAAGACATCAAAGTCC+CGG - chr4.1:31808959-31808978 MS.gene003675:intron 30.0%
TAAAACATAGGCAAATAGCT+GGG - chr4.1:31808131-31808150 MS.gene003675:intron 30.0%
TAAAATGATCACGCAGATAT+TGG - chr4.1:31811334-31811353 MS.gene003675:CDS 30.0%
TAGTTGTGTTAATTCCAGTA+TGG - chr4.1:31808232-31808251 MS.gene003675:CDS 30.0%
TATGCAAAAACACTTAAGCT+TGG + chr4.1:31810483-31810502 None:intergenic 30.0%
TATGTAAAAATAAGGGGTAG+GGG - chr4.1:31810648-31810667 MS.gene003675:intron 30.0%
TCACGAATTGTATAGTAAGA+TGG - chr4.1:31807276-31807295 MS.gene003675:intron 30.0%
TCATTAGTTCACTTATCCTT+AGG + chr4.1:31811459-31811478 None:intergenic 30.0%
TGATATGTGATGATTGTTTG+TGG - chr4.1:31807516-31807535 MS.gene003675:intron 30.0%
TGGAATACAATAGAGTATAG+GGG + chr4.1:31811067-31811086 None:intergenic 30.0%
TGGAATATAACTTTCTGAAC+TGG - chr4.1:31808156-31808175 MS.gene003675:intron 30.0%
TGTAGAAAAAACAAGCAGAT+AGG + chr4.1:31809766-31809785 None:intergenic 30.0%
TTTCATGTTTAATGCAGCTA+AGG - chr4.1:31811483-31811502 MS.gene003675:intron 30.0%
! ACATTTTGTACATCTCTTCA+AGG - chr4.1:31809062-31809081 MS.gene003675:intron 30.0%
! AGCAATCCATTTTATACCTT+GGG - chr4.1:31810129-31810148 MS.gene003675:intron 30.0%
! ATCTGAATGTAATGTTTTGC+TGG - chr4.1:31807733-31807752 MS.gene003675:intron 30.0%
! CTAAATCCTTTTATCTTCAC+AGG - chr4.1:31811106-31811125 MS.gene003675:CDS 30.0%
! TATTTTCTTGCAGCTTTTTG+GGG - chr4.1:31809316-31809335 MS.gene003675:intron 30.0%
! TCAAAAGTACAAAGCTAACA+TGG + chr4.1:31809837-31809856 None:intergenic 30.0%
! TGATGATTTGGATATGGATT+TGG - chr4.1:31807159-31807178 MS.gene003675:intron 30.0%
! TTTAGTGATAAGTTGGATGA+TGG - chr4.1:31808399-31808418 MS.gene003675:intron 30.0%
! TTTTGATGAACATGGTTACT+AGG - chr4.1:31807338-31807357 MS.gene003675:CDS 30.0%
!! GGTAGATTTTAGTGATAAGT+TGG - chr4.1:31808392-31808411 MS.gene003675:intron 30.0%
!! GTTTTGATCATGTGACTATT+TGG - chr4.1:31808454-31808473 MS.gene003675:intron 30.0%
!! TATTAAGTAACTTGTTGCAC+AGG - chr4.1:31810946-31810965 MS.gene003675:CDS 30.0%
!! TGAGTGTTTTGTTGTATATC+AGG - chr4.1:31808744-31808763 MS.gene003675:CDS 30.0%
!! TTTTGAAGATATTGAGAGGA+TGG - chr4.1:31807544-31807563 MS.gene003675:CDS 30.0%
!!! TGATATGGTTTTGATGAACA+TGG - chr4.1:31807330-31807349 MS.gene003675:CDS 30.0%
!!! TGCTGGCTATTTTGATTTTT+AGG - chr4.1:31807750-31807769 MS.gene003675:intron 30.0%
AAAAAATAGAGGTAAGCCCA+AGG + chr4.1:31810148-31810167 None:intergenic 35.0%
AAAATAGGAGCTAATGACCA+TGG + chr4.1:31808425-31808444 None:intergenic 35.0%
AAATCAGGGAAGCTATATTC+AGG - chr4.1:31807612-31807631 MS.gene003675:CDS 35.0%
AACAAGTGTCATCGAATTCT+TGG + chr4.1:31807820-31807839 None:intergenic 35.0%
AATATAGCTTCCCTGATTTC+TGG + chr4.1:31807611-31807630 None:intergenic 35.0%
ACAAAATGTCTGACAATGCA+AGG - chr4.1:31809688-31809707 MS.gene003675:intron 35.0%
ACACTAAAAGATCATGGACT+TGG + chr4.1:31809552-31809571 None:intergenic 35.0%
ACTATAAGGATTATGAGGTC+TGG - chr4.1:31810421-31810440 MS.gene003675:CDS 35.0%
AGACAGACACTAAAAGATCA+TGG + chr4.1:31809558-31809577 None:intergenic 35.0%
AGAGAAAAATCTGCTTCTCA+AGG - chr4.1:31807130-31807149 MS.gene003675:intron 35.0%
ATATGCAATTCCTCATGCAT+TGG - chr4.1:31810105-31810124 MS.gene003675:intron 35.0%
ATCATGGAGAAGATGCAAAT+TGG - chr4.1:31811217-31811236 MS.gene003675:CDS 35.0%
ATGAGGAATTTGAATCCTTC+TGG - chr4.1:31807424-31807443 MS.gene003675:intron 35.0%
ATTACGACTTAGTGAAGCAT+TGG - chr4.1:31810842-31810861 MS.gene003675:CDS 35.0%
CATACTCACTTAGAATGATG+TGG - chr4.1:31810499-31810518 MS.gene003675:intron 35.0%
CCATGAAGGGAATGATTATT+CGG - chr4.1:31807570-31807589 MS.gene003675:CDS 35.0%
CTCATAATCCTTATAGTGCA+GGG + chr4.1:31810418-31810437 None:intergenic 35.0%
CTCGATTATACCAGAAATCA+GGG - chr4.1:31807598-31807617 MS.gene003675:CDS 35.0%
CTCTTTATCAAACCTAGTGT+GGG - chr4.1:31810214-31810233 MS.gene003675:intron 35.0%
CTTCCTGCAAAGTAAAACAT+AGG - chr4.1:31808119-31808138 MS.gene003675:intron 35.0%
GAAAACAAAAACTCACCAGA+AGG + chr4.1:31807442-31807461 None:intergenic 35.0%
GAGCTAGATGATGTAAAGAA+AGG - chr4.1:31809215-31809234 MS.gene003675:CDS 35.0%
GCTATGTAAAAATAAGGGGT+AGG - chr4.1:31810646-31810665 MS.gene003675:CDS 35.0%
GGAATACAATAGAGTATAGG+GGG + chr4.1:31811066-31811085 None:intergenic 35.0%
GGTGGAATACAATAGAGTAT+AGG + chr4.1:31811069-31811088 None:intergenic 35.0%
GTAAAACATAGGCAAATAGC+TGG - chr4.1:31808130-31808149 MS.gene003675:intron 35.0%
GTAATTACACGAGTCATTTC+TGG - chr4.1:31807681-31807700 MS.gene003675:intron 35.0%
TAAACAAATTGTGAGGCTTC+AGG - chr4.1:31808558-31808577 MS.gene003675:CDS 35.0%
TATTGTTTCCCTGCACTATA+AGG - chr4.1:31810407-31810426 MS.gene003675:CDS 35.0%
TCAATTTGATCTAGAAGGTG+AGG - chr4.1:31808300-31808319 MS.gene003675:CDS 35.0%
TCATGGAGAAGATGCAAATT+GGG - chr4.1:31811218-31811237 MS.gene003675:CDS 35.0%
TCTCATAACTACTGGTGTTT+CGG - chr4.1:31811144-31811163 MS.gene003675:CDS 35.0%
TCTCTTTATCAAACCTAGTG+TGG - chr4.1:31810213-31810232 MS.gene003675:intron 35.0%
TCTTAACCTCTTGACAAATG+AGG + chr4.1:31808333-31808352 None:intergenic 35.0%
TGAACATGCTTCTCAAACAT+AGG + chr4.1:31807370-31807389 None:intergenic 35.0%
TGATAACTAGGTTATGACTC+TGG - chr4.1:31810072-31810091 MS.gene003675:intron 35.0%
TTAAGAGCTCAACTTCAATG+AGG - chr4.1:31807407-31807426 MS.gene003675:intron 35.0%
! ATATTCAGGTGTCTAGTTTG+TGG - chr4.1:31807626-31807645 MS.gene003675:CDS 35.0%
! ATTTTCTTGCAGCTTTTTGG+GGG - chr4.1:31809317-31809336 MS.gene003675:intron 35.0%
! CAGCAATCCATTTTATACCT+TGG - chr4.1:31810128-31810147 MS.gene003675:intron 35.0%
! GTATGAGAAGTTGATCAAAC+AGG - chr4.1:31807195-31807214 MS.gene003675:CDS 35.0%
! TGGTGATGATGATTTGGATA+TGG - chr4.1:31807153-31807172 MS.gene003675:intron 35.0%
! TTGAGAAGCATGTTCAAACT+AGG - chr4.1:31807374-31807393 MS.gene003675:CDS 35.0%
! TTGCCTATGTTTTACTTTGC+AGG + chr4.1:31808125-31808144 None:intergenic 35.0%
! TTTGTTGTATATCAGGTGAC+TGG - chr4.1:31808751-31808770 MS.gene003675:CDS 35.0%
!! TATCACCTTTTTGCTACTTC+CGG + chr4.1:31810682-31810701 None:intergenic 35.0%
!!! GGGCTTACCTCTATTTTTTA+GGG - chr4.1:31810149-31810168 MS.gene003675:intron 35.0%
!!! TGGGCTTACCTCTATTTTTT+AGG - chr4.1:31810148-31810167 MS.gene003675:intron 35.0%
AAAGAAAGGTCTTCTTTGCC+AGG - chr4.1:31809229-31809248 MS.gene003675:CDS 40.0%
AACTAACCTGGACAAAAGAG+TGG + chr4.1:31810037-31810056 None:intergenic 40.0%
AAGCAAAAAGCAGAAGGAAC+AGG + chr4.1:31808070-31808089 None:intergenic 40.0%
AATAGACTCTCAATCTGCCT+TGG + chr4.1:31810825-31810844 None:intergenic 40.0%
AATAGCAAGCTAACAGTGTG+AGG + chr4.1:31808616-31808635 None:intergenic 40.0%
ACAGGTCGAAAAACATGATG+TGG - chr4.1:31810964-31810983 MS.gene003675:CDS 40.0%
ACTAACCTGGACAAAAGAGT+GGG + chr4.1:31810036-31810055 None:intergenic 40.0%
ACTGTTTCAATAGCAAAGGC+AGG - chr4.1:31809904-31809923 MS.gene003675:intron 40.0%
ACTTTGCCTCATTTGTCAAG+AGG - chr4.1:31808324-31808343 MS.gene003675:intron 40.0%
AGCAAAAAGCAGAAGGAACA+GGG + chr4.1:31808069-31808088 None:intergenic 40.0%
AGCTAGAAAGATGTGTTACC+TGG + chr4.1:31809250-31809269 None:intergenic 40.0%
ATAATTGCAGAACATGGAGC+AGG - chr4.1:31810524-31810543 MS.gene003675:intron 40.0%
ATACACAAACTTTCTCCACG+TGG - chr4.1:31809440-31809459 MS.gene003675:intron 40.0%
ATAGAGTATAGGGGGTTGTT+TGG + chr4.1:31811058-31811077 None:intergenic 40.0%
ATCAGGTGACTGGTATATAC+AGG - chr4.1:31808761-31808780 MS.gene003675:CDS 40.0%
ATGGAGAAGATGCAAATTGG+GGG - chr4.1:31811220-31811239 MS.gene003675:CDS 40.0%
ATGTGAATGATGCGATTCAG+AGG - chr4.1:31807092-31807111 MS.gene003675:intron 40.0%
ATTCTCCGGAAGTAGCAAAA+AGG - chr4.1:31810674-31810693 MS.gene003675:intron 40.0%
ATTGTTGGAATCCATTGGAG+TGG + chr4.1:31806659-31806678 None:intergenic 40.0%
CAATATGTTTGGCAAGTCGT+CGG + chr4.1:31810392-31810411 None:intergenic 40.0%
CACTTGTCTCTGTTTATTCC+AGG - chr4.1:31809867-31809886 MS.gene003675:intron 40.0%
CAGCTTCATCTGATAGTTGT+GGG + chr4.1:31810608-31810627 None:intergenic 40.0%
CATCAATGCAACAGATACCT+CGG + chr4.1:31809662-31809681 None:intergenic 40.0%
CATGGAGAAGATGCAAATTG+GGG - chr4.1:31811219-31811238 MS.gene003675:CDS 40.0%
CCGAATAATCATTCCCTTCA+TGG + chr4.1:31807573-31807592 None:intergenic 40.0%
CCTCATAATCCTTATAGTGC+AGG + chr4.1:31810419-31810438 None:intergenic 40.0%
CCTGCACTATAAGGATTATG+AGG - chr4.1:31810416-31810435 MS.gene003675:CDS 40.0%
CTTATGTCCAACAACTAACC+TGG + chr4.1:31810049-31810068 None:intergenic 40.0%
CTTCACAGGAACTATTGACA+TGG - chr4.1:31811120-31811139 MS.gene003675:CDS 40.0%
GAAAAATCTGCTTCTCAAGG+TGG - chr4.1:31807133-31807152 MS.gene003675:intron 40.0%
GAACCATTGTTGGAATCCAT+TGG + chr4.1:31806664-31806683 None:intergenic 40.0%
GAAGAGGGACCTGAAAAATA+GGG + chr4.1:31806767-31806786 None:intergenic 40.0%
GAAGTGATACGAACCATTGT+TGG + chr4.1:31806674-31806693 None:intergenic 40.0%
GACATGGATCTCATAACTAC+TGG - chr4.1:31811136-31811155 MS.gene003675:CDS 40.0%
GACTTAACAGTTCTCTGAGT+TGG + chr4.1:31808808-31808827 None:intergenic 40.0%
GATGTAGCAAGCATAAACAC+TGG + chr4.1:31811436-31811455 None:intergenic 40.0%
GATTATATCGTGAACCGCTA+GGG + chr4.1:31809978-31809997 None:intergenic 40.0%
GCTCGATTATACCAGAAATC+AGG - chr4.1:31807597-31807616 MS.gene003675:CDS 40.0%
GGAAGACATAGGAAAGTCTT+CGG + chr4.1:31806999-31807018 None:intergenic 40.0%
GGACATAAGTCGTGATAACT+AGG - chr4.1:31810060-31810079 MS.gene003675:intron 40.0%
GGACTTGAATTGGAATTGTC+CGG + chr4.1:31806791-31806810 None:intergenic 40.0%
GGTAAGCCCAAGGTATAAAA+TGG + chr4.1:31810138-31810157 None:intergenic 40.0%
GTCAGCCTTTCATAGATATC+TGG + chr4.1:31809170-31809189 None:intergenic 40.0%
GTGCAGGGAAACAATATGTT+TGG + chr4.1:31810403-31810422 None:intergenic 40.0%
GTTGGCAATTGGACTTGAAT+TGG + chr4.1:31806801-31806820 None:intergenic 40.0%
GTTGTGGGTGTATGTACTTT+CGG + chr4.1:31810593-31810612 None:intergenic 40.0%
GTTTGGATAACTACCAGTTC+TGG + chr4.1:31811041-31811060 None:intergenic 40.0%
TAAGATGAATTTCGCTGCCA+GGG + chr4.1:31811379-31811398 None:intergenic 40.0%
TAATACCTCCAATAACCGCA+TGG + chr4.1:31811251-31811270 None:intergenic 40.0%
TATACAGTTTCGCCTGTTTC+AGG + chr4.1:31809527-31809546 None:intergenic 40.0%
TATCAAACCTAGTGTGGGTA+GGG - chr4.1:31810219-31810238 MS.gene003675:intron 40.0%
TCAGACAAGCATCAATTAGC+AGG + chr4.1:31809110-31809129 None:intergenic 40.0%
TCAGGTGACTGGTATATACA+GGG - chr4.1:31808762-31808781 MS.gene003675:CDS 40.0%
TCATGTGACTATTTGGCGTA+AGG - chr4.1:31808461-31808480 MS.gene003675:intron 40.0%
TCTCTGTTTATTCCAGGTGA+TGG - chr4.1:31809873-31809892 MS.gene003675:intron 40.0%
TGAACCTACTGTTTGCTTGA+GGG - chr4.1:31807782-31807801 MS.gene003675:CDS 40.0%
TGAAGAGGGACCTGAAAAAT+AGG + chr4.1:31806768-31806787 None:intergenic 40.0%
TGCTCCATGTTCTGCAATTA+TGG + chr4.1:31810525-31810544 None:intergenic 40.0%
TGTTGTCAATGACAGACAAG+CGG + chr4.1:31810002-31810021 None:intergenic 40.0%
TTAAGATGAATTTCGCTGCC+AGG + chr4.1:31811380-31811399 None:intergenic 40.0%
TTATCAAACCTAGTGTGGGT+AGG - chr4.1:31810218-31810237 MS.gene003675:intron 40.0%
TTATTGCTTCCCTCAATGCA+AGG - chr4.1:31809929-31809948 MS.gene003675:intron 40.0%
TTGTGGGTGTATGTACTTTC+GGG + chr4.1:31810592-31810611 None:intergenic 40.0%
TTTGCTTGTGAGCAAATCAG+TGG - chr4.1:31808083-31808102 MS.gene003675:intron 40.0%
! AATCTTCAGGTTCTTGAGAG+TGG - chr4.1:31809618-31809637 MS.gene003675:CDS 40.0%
! ACTCCAATGGATTCCAACAA+TGG - chr4.1:31806658-31806677 MS.gene003675:CDS 40.0%
! TCAAGGTGGTGATGATGATT+TGG - chr4.1:31807147-31807166 MS.gene003675:intron 40.0%
! TTATGCTTGCTACATCCCTA+AGG - chr4.1:31811440-31811459 MS.gene003675:intron 40.0%
! TTGGCGTAAGGTTTTTCACT+TGG - chr4.1:31808473-31808492 MS.gene003675:intron 40.0%
!! AATGCTTTGAAGTTGGCATC+TGG - chr4.1:31809341-31809360 MS.gene003675:intron 40.0%
!! ATCGGTTAGTTTAGCTTGCT+TGG - chr4.1:31810884-31810903 MS.gene003675:CDS 40.0%
!! CTTGCTATTGCATGACAAAC+TGG - chr4.1:31808627-31808646 MS.gene003675:intron 40.0%
!! CTTTTGTCCAGGTTAGTTGT+TGG - chr4.1:31810039-31810058 MS.gene003675:intron 40.0%
!!! GAGTTGATCTTTTTTCTGGC+AGG - chr4.1:31810319-31810338 MS.gene003675:intron 40.0%
!!! GGTGCTTGCCATTTTTGATA+TGG - chr4.1:31807315-31807334 MS.gene003675:intron 40.0%
AACACAACTAAACTGCCAGC+AGG + chr4.1:31808222-31808241 None:intergenic 45.0%
AACCGATGCAAGTAAGTCTG+TGG - chr4.1:31807843-31807862 MS.gene003675:CDS 45.0%
AGACACTCGCAACATGATCA+TGG - chr4.1:31811201-31811220 MS.gene003675:CDS 45.0%
AGACATAGGAAAGTCTTCGG+AGG + chr4.1:31806996-31807015 None:intergenic 45.0%
AGCCACAGACTTACTTGCAT+CGG + chr4.1:31807848-31807867 None:intergenic 45.0%
AGGTAATAACGGCAACTCCA+AGG - chr4.1:31810805-31810824 MS.gene003675:CDS 45.0%
ATACAGGGCTATGAGTGTCA+GGG - chr4.1:31808777-31808796 MS.gene003675:CDS 45.0%
ATCAAACCTAGTGTGGGTAG+GGG - chr4.1:31810220-31810239 MS.gene003675:intron 45.0%
ATGGAGTGATTGATTGACGG+CGG + chr4.1:31806850-31806869 None:intergenic 45.0%
ATTGGAATTGTCCGGTGAAG+AGG + chr4.1:31806783-31806802 None:intergenic 45.0%
CATGGAAACAAATCCTTCGC+TGG + chr4.1:31811528-31811547 None:intergenic 45.0%
CGAAAAACATGATGTGGTGG+AGG - chr4.1:31810970-31810989 MS.gene003675:CDS 45.0%
CGGATGGAGTGATTGATTGA+CGG + chr4.1:31806853-31806872 None:intergenic 45.0%
CGTCAATCAATCACTCCATC+CGG - chr4.1:31806851-31806870 MS.gene003675:intron 45.0%
CTGAACCTACTGTTTGCTTG+AGG - chr4.1:31807781-31807800 MS.gene003675:CDS 45.0%
GAACTAAAGAATCAGAGCCC+TGG - chr4.1:31811359-31811378 MS.gene003675:CDS 45.0%
GACTTTCCTATGTCTTCCGA+AGG - chr4.1:31807001-31807020 MS.gene003675:CDS 45.0%
GAGAGGATGGTATCCATGAA+GGG - chr4.1:31807557-31807576 MS.gene003675:CDS 45.0%
GATGCTATGGAGGTTGACAA+TGG - chr4.1:31808994-31809013 MS.gene003675:CDS 45.0%
GCAGCTTCATCTGATAGTTG+TGG + chr4.1:31810609-31810628 None:intergenic 45.0%
GCTATTGCATGACAAACTGG+TGG - chr4.1:31808630-31808649 MS.gene003675:intron 45.0%
GCTCACAAGCAAAAAGCAGA+AGG + chr4.1:31808076-31808095 None:intergenic 45.0%
GGAATCCATTGGAGTGGAAT+CGG + chr4.1:31806653-31806672 None:intergenic 45.0%
GGATTATATCGTGAACCGCT+AGG + chr4.1:31809979-31809998 None:intergenic 45.0%
GGTCGAAAAACATGATGTGG+TGG - chr4.1:31810967-31810986 MS.gene003675:CDS 45.0%
GTGGCCATAATTGCAGAACA+TGG - chr4.1:31810518-31810537 MS.gene003675:intron 45.0%
GTGTAATTACCTCTCTCCAC+CGG + chr4.1:31807671-31807690 None:intergenic 45.0%
GTTGTCAATGACAGACAAGC+GGG + chr4.1:31810001-31810020 None:intergenic 45.0%
TATACAGGGCTATGAGTGTC+AGG - chr4.1:31808776-31808795 MS.gene003675:CDS 45.0%
TCGGATTCGCTTCTCAGAAT+CGG - chr4.1:31810866-31810885 MS.gene003675:CDS 45.0%
TCTGCAATGGATACCAGAAC+TGG - chr4.1:31811025-31811044 MS.gene003675:CDS 45.0%
TCTTCCCTCAAGCAAACAGT+AGG + chr4.1:31807789-31807808 None:intergenic 45.0%
TGAAAGGCTGACAAAGTCAC+TGG - chr4.1:31809178-31809197 MS.gene003675:CDS 45.0%
TGAGAGGATGGTATCCATGA+AGG - chr4.1:31807556-31807575 MS.gene003675:CDS 45.0%
TGCAATGCAGCAATCTGCAA+TGG - chr4.1:31811012-31811031 MS.gene003675:CDS 45.0%
TGGCATTTACACCAGTGGAA+GGG - chr4.1:31809460-31809479 MS.gene003675:intron 45.0%
TTAGTCCCCCAAACGTAAGT+CGG + chr4.1:31807058-31807077 None:intergenic 45.0%
TTCCCTCAATGCAAGGACTT+CGG - chr4.1:31809936-31809955 MS.gene003675:intron 45.0%
TTCGCCTGTTTCAGGATCTT+TGG + chr4.1:31809519-31809538 None:intergenic 45.0%
TTGATGCTTGTCTGAGTCTC+AGG - chr4.1:31809115-31809134 MS.gene003675:intron 45.0%
TTGGAATTGTCCGGTGAAGA+GGG + chr4.1:31806782-31806801 None:intergenic 45.0%
TTGGGGGACTAACATTAGTG+TGG - chr4.1:31807066-31807085 MS.gene003675:CDS 45.0%
TTGTACCAGGATCACCAACA+AGG + chr4.1:31809397-31809416 None:intergenic 45.0%
TTGTCAATGACAGACAAGCG+GGG + chr4.1:31810000-31810019 None:intergenic 45.0%
TTTCCTATGTCTTCCGAAGG+CGG - chr4.1:31807004-31807023 MS.gene003675:CDS 45.0%
! CAGCGAAGGATTTGTTTCCA+TGG - chr4.1:31811526-31811545 MS.gene003675:intron 45.0%
! CATGACAAACTGGTGGATAC+TGG - chr4.1:31808637-31808656 MS.gene003675:intron 45.0%
! GAAGGATTTGTTTCCATGGC+TGG - chr4.1:31811530-31811549 MS.gene003675:intron 45.0%
! GATAAGTTGGATGATGGCCA+TGG - chr4.1:31808405-31808424 MS.gene003675:intron 45.0%
! TCATCTAGCTCCCAGATGTT+TGG + chr4.1:31809206-31809225 None:intergenic 45.0%
! TTTTACACTGTCACCAGCCA+TGG + chr4.1:31811546-31811565 None:intergenic 45.0%
!! ATGATGTGGTGGAGGCATTT+CGG - chr4.1:31810978-31810997 MS.gene003675:CDS 45.0%
!! ATTCTCCTTGTTGGTGATCC+TGG - chr4.1:31809389-31809408 MS.gene003675:CDS 45.0%
!! CAGTTTGTTGTTCCATCACC+TGG + chr4.1:31809888-31809907 None:intergenic 45.0%
!! GACTTAGTGAAGCATTGGCT+CGG - chr4.1:31810847-31810866 MS.gene003675:CDS 45.0%
!!! TTTTTCAGGTCCCTCTTCAC+CGG - chr4.1:31806769-31806788 MS.gene003675:intron 45.0%
AAAATGGCAAGCACCTCGAG+AGG + chr4.1:31807310-31807329 None:intergenic 50.0%
AAAGCCAGGTGACAGAGTTG+AGG - chr4.1:31808660-31808679 MS.gene003675:intron 50.0%
AAATTGGGGGACGTTCCATG+CGG - chr4.1:31811233-31811252 MS.gene003675:CDS 50.0%
AACCTGGACAAAAGAGTGGG+AGG + chr4.1:31810033-31810052 None:intergenic 50.0%
AAGCGAGATCTGTTCGGTTG+AGG + chr4.1:31806881-31806900 None:intergenic 50.0%
AAGTCTTCGGAGGTGGAAGT+TGG + chr4.1:31806986-31807005 None:intergenic 50.0%
ACACCGAAGTCCTTGCATTG+AGG + chr4.1:31809942-31809961 None:intergenic 50.0%
ACACCTGACGAGATACCTGA+AGG - chr4.1:31808583-31808602 MS.gene003675:intron 50.0%
ACCTCGGTCGCTCAAAACTA+GGG + chr4.1:31809646-31809665 None:intergenic 50.0%
ACGTTCCATGCGGTTATTGG+AGG - chr4.1:31811243-31811262 MS.gene003675:CDS 50.0%
AGGGGTAGGGGAAAATTCTC+CGG - chr4.1:31810660-31810679 MS.gene003675:intron 50.0%
ATGCTTGTCTGAGTCTCAGG+TGG - chr4.1:31809118-31809137 MS.gene003675:intron 50.0%
ATGGAGGTTGACAATGGCCA+GGG - chr4.1:31809000-31809019 MS.gene003675:CDS 50.0%
ATGTTTGGCAAGTCGTCGGT+CGG + chr4.1:31810388-31810407 None:intergenic 50.0%
CACCGAAGTCCTTGCATTGA+GGG + chr4.1:31809941-31809960 None:intergenic 50.0%
CATAGGAAAGTCTTCGGAGG+TGG + chr4.1:31806993-31807012 None:intergenic 50.0%
CTTCTTCTGGATTTCTGCCC+TGG + chr4.1:31809020-31809039 None:intergenic 50.0%
GAACATGGAGCAGGATGTGT+TGG - chr4.1:31810533-31810552 MS.gene003675:intron 50.0%
GCATTTACACCAGTGGAAGG+GGG - chr4.1:31809462-31809481 MS.gene003675:intron 50.0%
GGCATTTACACCAGTGGAAG+GGG - chr4.1:31809461-31809480 MS.gene003675:intron 50.0%
GGGGACTAACATTAGTGTGG+AGG - chr4.1:31807069-31807088 MS.gene003675:CDS 50.0%
GGTTGGATTGACTGCTTACG+TGG - chr4.1:31809493-31809512 MS.gene003675:intron 50.0%
GTAGCGAAGCGAGATCTGTT+CGG + chr4.1:31806887-31806906 None:intergenic 50.0%
GTCTCAGGTGGCTAAACTGA+AGG - chr4.1:31809130-31809149 MS.gene003675:intron 50.0%
GTGGCATTTACACCAGTGGA+AGG - chr4.1:31809459-31809478 MS.gene003675:intron 50.0%
GTGGCCAAAGATCCTGAAAC+AGG - chr4.1:31809512-31809531 MS.gene003675:intron 50.0%
TACCTCGGTCGCTCAAAACT+AGG + chr4.1:31809647-31809666 None:intergenic 50.0%
TAGCATCCTCAACCAGCATC+CGG + chr4.1:31808981-31809000 None:intergenic 50.0%
TATGGAGGTTGACAATGGCC+AGG - chr4.1:31808999-31809018 MS.gene003675:CDS 50.0%
TCTGTTCGGTTGAGGAGTTC+CGG + chr4.1:31806873-31806892 None:intergenic 50.0%
TGGACAAAAGAGTGGGAGGA+AGG + chr4.1:31810029-31810048 None:intergenic 50.0%
TGGATTGCTGCCAATGCATG+AGG + chr4.1:31810118-31810137 None:intergenic 50.0%
TTGTGGATTCTGCTCTGACC+CGG - chr4.1:31807643-31807662 MS.gene003675:CDS 50.0%
TTTCGGCAAGCGAAAGGATG+AGG - chr4.1:31811161-31811180 MS.gene003675:CDS 50.0%
! AGGAGCATGTTACACGAGGT+TGG - chr4.1:31809708-31809727 MS.gene003675:intron 50.0%
! CAATGCAAGGACTTCGGTGT+TGG - chr4.1:31809942-31809961 MS.gene003675:intron 50.0%
! GATGCTGGTTGAGGATGCTA+TGG - chr4.1:31808981-31809000 MS.gene003675:CDS 50.0%
! TGCAAGGAGCATGTTACACG+AGG - chr4.1:31809704-31809723 MS.gene003675:intron 50.0%
! TTCCTCCCACTCTTTTGTCC+AGG - chr4.1:31810028-31810047 MS.gene003675:intron 50.0%
!! GAGGAGTAGGTGTTGGCAAT+TGG + chr4.1:31806812-31806831 None:intergenic 50.0%
!! TGGGGGCAATGCTTTGAAGT+TGG - chr4.1:31809334-31809353 MS.gene003675:intron 50.0%
AACCTAGTGTGGGTAGGGGT+TGG - chr4.1:31810224-31810243 MS.gene003675:intron 55.0%
AGCATCCTCAACCAGCATCC+GGG + chr4.1:31808980-31808999 None:intergenic 55.0%
AGGGCTATGAGTGTCAGGGT+AGG - chr4.1:31808781-31808800 MS.gene003675:CDS 55.0%
AGTCACTGGCGCCAAACATC+TGG - chr4.1:31809192-31809211 MS.gene003675:CDS 55.0%
ATGTCTTCCGAAGGCGGTGA+CGG - chr4.1:31807010-31807029 MS.gene003675:CDS 55.0%
ATTCTGCTCTGACCCGGTTC+CGG - chr4.1:31807649-31807668 MS.gene003675:CDS 55.0%
CATAGGCAAATAGCTGGGCG+TGG - chr4.1:31808136-31808155 MS.gene003675:intron 55.0%
CCACGTGGCATTTACACCAG+TGG - chr4.1:31809455-31809474 MS.gene003675:intron 55.0%
CCACTGGTGTAAATGCCACG+TGG + chr4.1:31809458-31809477 None:intergenic 55.0%
CCTCCTTCAGGTATCTCGTC+AGG + chr4.1:31808589-31808608 None:intergenic 55.0%
CCTGACGAGATACCTGAAGG+AGG - chr4.1:31808586-31808605 MS.gene003675:intron 55.0%
CTCACCTCAACTCTGTCACC+TGG + chr4.1:31808667-31808686 None:intergenic 55.0%
CTGGTGTTTCGGCAAGCGAA+AGG - chr4.1:31811155-31811174 MS.gene003675:CDS 55.0%
GACATCAAAGTCCCGGATGC+TGG - chr4.1:31808966-31808985 MS.gene003675:intron 55.0%
GCTGGTTGAGGATGCTATGG+AGG - chr4.1:31808984-31809003 MS.gene003675:CDS 55.0%
GGAGGGAGTTGGAGTTGCAT+CGG + chr4.1:31806912-31806931 None:intergenic 55.0%
GGCTTCCGATTCCACTCCAA+TGG - chr4.1:31806645-31806664 MS.gene003675:CDS 55.0%
GGGACGTTCCATGCGGTTAT+TGG - chr4.1:31811240-31811259 MS.gene003675:CDS 55.0%
GGTTACGACATGGATGACGC+CGG - chr4.1:31807031-31807050 MS.gene003675:CDS 55.0%
GTCACTGGCGCCAAACATCT+GGG - chr4.1:31809193-31809212 MS.gene003675:CDS 55.0%
TCACCGCCTTCGGAAGACAT+AGG + chr4.1:31807010-31807029 None:intergenic 55.0%
TGATTGATTGACGGCGGCGA+CGG + chr4.1:31806844-31806863 None:intergenic 55.0%
TTACCTCTCTCCACCGGAAC+CGG + chr4.1:31807665-31807684 None:intergenic 55.0%
TTCGGTTGAGGAGTTCCGGA+TGG + chr4.1:31806869-31806888 None:intergenic 55.0%
! AAAGTCCCGGATGCTGGTTG+AGG - chr4.1:31808972-31808991 MS.gene003675:CDS 55.0%
! AGCTGCGACTTGCTTGTACC+AGG + chr4.1:31809410-31809429 None:intergenic 55.0%
! CTGGTGGATACTGGAAAGCC+AGG - chr4.1:31808646-31808665 MS.gene003675:intron 55.0%
! GATGGTGAGGTATCCTCTCG+AGG - chr4.1:31807294-31807313 MS.gene003675:intron 55.0%
!! TTCGGAGGTGGAAGTTGGTG+TGG + chr4.1:31806981-31807000 None:intergenic 55.0%
!! TTGGCTTGCGCAAACCCTAG+CGG - chr4.1:31809961-31809980 MS.gene003675:intron 55.0%
ACGCCGGTCCGACTTACGTT+TGG - chr4.1:31807047-31807066 MS.gene003675:CDS 60.0%
CCCCCAAACGTAAGTCGGAC+CGG + chr4.1:31807053-31807072 None:intergenic 60.0%
CCGGTCCGACTTACGTTTGG+GGG - chr4.1:31807050-31807069 MS.gene003675:CDS 60.0%
CGCCGGTCCGACTTACGTTT+GGG - chr4.1:31807048-31807067 MS.gene003675:CDS 60.0%
GCCGGTCCGACTTACGTTTG+GGG - chr4.1:31807049-31807068 MS.gene003675:CDS 60.0%
GGGAGTTGGAGTTGCATCGG+AGG + chr4.1:31806909-31806928 None:intergenic 60.0%
GTCGTAACCGTCACCGCCTT+CGG + chr4.1:31807020-31807039 None:intergenic 60.0%
GTTGCTACTCTCGCCAGCGA+AGG - chr4.1:31811512-31811531 MS.gene003675:intron 60.0%
TACCTCTCTCCACCGGAACC+GGG + chr4.1:31807664-31807683 None:intergenic 60.0%
TGCCAACCCCTACCCACACT+AGG + chr4.1:31810229-31810248 None:intergenic 60.0%
! AGGCGGTGACGGTTACGACA+TGG - chr4.1:31807021-31807040 MS.gene003675:CDS 60.0%
! GTGTGAGGCGTTCCTCCTTC+AGG + chr4.1:31808601-31808620 None:intergenic 60.0%
!! AAGTTGGTGTGGCGGGGACA+CGG + chr4.1:31806970-31806989 None:intergenic 60.0%
!! AGGTGGAAGTTGGTGTGGCG+GGG + chr4.1:31806976-31806995 None:intergenic 60.0%
!! GAGGTGGAAGTTGGTGTGGC+GGG + chr4.1:31806977-31806996 None:intergenic 60.0%
!! GCATCTGGCGCTAGCTTTCG+TGG - chr4.1:31809356-31809375 MS.gene003675:intron 60.0%
!! GGAGGTGGAAGTTGGTGTGG+CGG + chr4.1:31806978-31806997 None:intergenic 60.0%
!! GGTGGAGGCATTTCGGCTTC+TGG - chr4.1:31810985-31811004 MS.gene003675:CDS 60.0%
!!! GCCCTAGTTTTGAGCGACCG+AGG - chr4.1:31809642-31809661 MS.gene003675:CDS 60.0%
AAGGGATGCCACCACCGCGA+CGG + chr4.1:31806940-31806959 None:intergenic 65.0%
CAGTGGAAGGGGGAGCTCAG+CGG - chr4.1:31809472-31809491 MS.gene003675:intron 65.0%
GCCAACACCTACTCCTCCCC+CGG - chr4.1:31806815-31806834 MS.gene003675:CDS 65.0%
TTGATTGACGGCGGCGACGG+CGG + chr4.1:31806841-31806860 None:intergenic 65.0%
CGCTGAGCTCCCCCTTCCAC+TGG + chr4.1:31809474-31809493 None:intergenic 70.0%
CTGCTCTGACCCGGTTCCGG+TGG - chr4.1:31807652-31807671 MS.gene003675:CDS 70.0%
GACCCGGTTCCGGTGGAGAG+AGG - chr4.1:31807659-31807678 MS.gene003675:CDS 70.0%
GCCGGGGGAGGAGTAGGTGT+TGG + chr4.1:31806819-31806838 None:intergenic 70.0%
GGAAGGGGGAGCTCAGCGGT+TGG - chr4.1:31809476-31809495 MS.gene003675:intron 70.0%
! CGCGGTGGTGGCATCCCTTC+CGG - chr4.1:31806941-31806960 MS.gene003675:intron 70.0%
! TTGGTGTGGCGGGGACACGG+CGG + chr4.1:31806967-31806986 None:intergenic 70.0%
ACTCCCTCCCGCCACCGTCG+CGG - chr4.1:31806923-31806942 MS.gene003675:intron 75.0%
GGATGCCACCACCGCGACGG+TGG + chr4.1:31806937-31806956 None:intergenic 75.0%
TGCCACCACCGCGACGGTGG+CGG + chr4.1:31806934-31806953 None:intergenic 75.0%
!! CGACGGTGGCGGGAGGGAGT+TGG + chr4.1:31806923-31806942 None:intergenic 75.0%
! ACGGCGGCCGGGGGAGGAGT+AGG + chr4.1:31806825-31806844 None:intergenic 80.0%
! CGGGGACACGGCGGCCGGAA+GGG + chr4.1:31806958-31806977 None:intergenic 80.0%
! GCCACCACCGCGACGGTGGC+GGG + chr4.1:31806933-31806952 None:intergenic 80.0%
! TCCCGCCACCGTCGCGGTGG+TGG - chr4.1:31806929-31806948 MS.gene003675:intron 80.0%
! TTGACGGCGGCGACGGCGGC+CGG + chr4.1:31806837-31806856 None:intergenic 80.0%
!! TGTGGCGGGGACACGGCGGC+CGG + chr4.1:31806963-31806982 None:intergenic 80.0%
!!! ACCACCGCGACGGTGGCGGG+AGG + chr4.1:31806930-31806949 None:intergenic 80.0%
!!! CCACCGCGACGGTGGCGGGA+GGG + chr4.1:31806929-31806948 None:intergenic 80.0%
! CCCTCCCGCCACCGTCGCGG+TGG - chr4.1:31806926-31806945 MS.gene003675:intron 85.0%
! GCGGGGACACGGCGGCCGGA+AGG + chr4.1:31806959-31806978 None:intergenic 85.0%
! TGACGGCGGCGACGGCGGCC+GGG + chr4.1:31806836-31806855 None:intergenic 85.0%
! ACGGCGGCGACGGCGGCCGG+GGG + chr4.1:31806834-31806853 None:intergenic 90.0%
! GACGGCGGCGACGGCGGCCG+GGG + chr4.1:31806835-31806854 None:intergenic 90.0%
! GCGGCGACGGCGGCCGGGGG+AGG + chr4.1:31806831-31806850 None:intergenic 95.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 31806643 31811574 31806643 ID=MS.gene003675
chr4.1 mRNA 31806643 31811574 31806643 ID=MS.gene003675.t1;Parent=MS.gene003675
chr4.1 exon 31811538 31811574 31811538 ID=MS.gene003675.t1.exon1;Parent=MS.gene003675.t1
chr4.1 CDS 31811538 31811574 31811538 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31810772 31811440 31810772 ID=MS.gene003675.t1.exon2;Parent=MS.gene003675.t1
chr4.1 CDS 31810772 31811440 31810772 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31810537 31810665 31810537 ID=MS.gene003675.t1.exon3;Parent=MS.gene003675.t1
chr4.1 CDS 31810537 31810665 31810537 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31810364 31810445 31810364 ID=MS.gene003675.t1.exon4;Parent=MS.gene003675.t1
chr4.1 CDS 31810364 31810445 31810364 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31809536 31809668 31809536 ID=MS.gene003675.t1.exon5;Parent=MS.gene003675.t1
chr4.1 CDS 31809536 31809668 31809536 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31809380 31809451 31809380 ID=MS.gene003675.t1.exon6;Parent=MS.gene003675.t1
chr4.1 CDS 31809380 31809451 31809380 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31809158 31809280 31809158 ID=MS.gene003675.t1.exon7;Parent=MS.gene003675.t1
chr4.1 CDS 31809158 31809280 31809158 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31808967 31809080 31808967 ID=MS.gene003675.t1.exon8;Parent=MS.gene003675.t1
chr4.1 CDS 31808967 31809080 31808967 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31808676 31808888 31808676 ID=MS.gene003675.t1.exon9;Parent=MS.gene003675.t1
chr4.1 CDS 31808676 31808888 31808676 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31808492 31808590 31808492 ID=MS.gene003675.t1.exon10;Parent=MS.gene003675.t1
chr4.1 CDS 31808492 31808590 31808492 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31808168 31808328 31808168 ID=MS.gene003675.t1.exon11;Parent=MS.gene003675.t1
chr4.1 CDS 31808168 31808328 31808168 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31807780 31807876 31807780 ID=MS.gene003675.t1.exon12;Parent=MS.gene003675.t1
chr4.1 CDS 31807780 31807876 31807780 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31807522 31807683 31807522 ID=MS.gene003675.t1.exon13;Parent=MS.gene003675.t1
chr4.1 CDS 31807522 31807683 31807522 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31807330 31807410 31807330 ID=MS.gene003675.t1.exon14;Parent=MS.gene003675.t1
chr4.1 CDS 31807330 31807410 31807330 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31807171 31807249 31807171 ID=MS.gene003675.t1.exon15;Parent=MS.gene003675.t1
chr4.1 CDS 31807171 31807249 31807171 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31806953 31807089 31806953 ID=MS.gene003675.t1.exon16;Parent=MS.gene003675.t1
chr4.1 CDS 31806953 31807089 31806953 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31806814 31806867 31806814 ID=MS.gene003675.t1.exon17;Parent=MS.gene003675.t1
chr4.1 CDS 31806814 31806867 31806814 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
chr4.1 exon 31806643 31806717 31806643 ID=MS.gene003675.t1.exon18;Parent=MS.gene003675.t1
chr4.1 CDS 31806643 31806717 31806643 ID=cds.MS.gene003675.t1;Parent=MS.gene003675.t1
Gene Sequence

>MS.gene003675

ATGGCTTCCGATTCCACTCCAATGGATTCCAACAATGGTTCGTATCACTTCACTTCACTTTTCTTCCATCTTCTTATTCAGATTTCTAATTTTTTAATTTTTTTCACTCATAATTTTGAAACCCTATTTTTCAGGTCCCTCTTCACCGGACAATTCCAATTCAAGTCCAATTGCCAACACCTACTCCTCCCCCGGCCGCCGTCGCCGCCGTCAATCAATCACTCCATCCGGAACTCCTCAACCGAACAGATCTCGCTTCGCTACCTCCGATGCAACTCCAACTCCCTCCCGCCACCGTCGCGGTGGTGGCATCCCTTCCGGCCGCCGTGTCCCCGCCACACCAACTTCCACCTCCGAAGACTTTCCTATGTCTTCCGAAGGCGGTGACGGTTACGACATGGATGACGCCGGTCCGACTTACGTTTGGGGGACTAACATTAGTGTGGAGGATGTGAATGATGCGATTCAGAGGTTTTTGAAGCATTTTAGAGAAAAATCTGCTTCTCAAGGTGGTGATGATGATTTGGATATGGATTTGGATATTGAAGGGAAGTATGAGAAGTTGATCAAACAGGTTATTGAATTGGAAGGTGAGTCTATTGATGTTGATGCACGTGATGTGTTTGATCACGATCACGAATTGTATAGTAAGATGGTGAGGTATCCTCTCGAGGTGCTTGCCATTTTTGATATGGTTTTGATGAACATGGTTACTAGGATGAATCCTATGTTTGAGAAGCATGTTCAAACTAGGATTTTTAATCTTAAGAGCTCAACTTCAATGAGGAATTTGAATCCTTCTGGTGAGTTTTTGTTTTCTGAAATTATTGTTATTCAATTCAACTTTGTGTGTTTGATTGTTAGCAATTAGATTGATATGTGATGATTGTTTGTGGTTTTGTTTTGAAGATATTGAGAGGATGGTATCCATGAAGGGAATGATTATTCGGTGTAGCTCGATTATACCAGAAATCAGGGAAGCTATATTCAGGTGTCTAGTTTGTGGATTCTGCTCTGACCCGGTTCCGGTGGAGAGAGGTAATTACACGAGTCATTTCTGGTTATTTATGTAGTTAAATGTTGTGTTCATATCTGAATGTAATGTTTTGCTGGCTATTTTGATTTTTAGGACGAATTGCTGAACCTACTGTTTGCTTGAGGGAAGAGTGTCAGTCCAAGAATTCGATGACACTTGTTCACAACCGATGCAAGTAAGTCTGTGGCTTATTTGTTTAAAATTTAAATAAGTGATTTTTGAGTTGATGATTTGGAATTGTAGTTCTATATTTTGACTGTTGGATAGTGTTGCAGTTTGCATGAATGATATTTGATGTTGAAGGGTCTATACTTTGAAGCAAGCTTCTTTTAGCTTTTTTCGGTTAACCCTTACATTATGTATGATATGTATAATAATTAGTCAGTTCCCTGTTCCTTCTGCTTTTTGCTTGTGAGCAAATCAGTGGCAGCACTGAAAATCTTCCTGCAAAGTAAAACATAGGCAAATAGCTGGGCGTGGAATATAACTTTCTGAACTGGTCTAATACTAATCTATTTCTAAGCAAAAAACTACTATTAACCTGCTGGCAGTTTAGTTGTGTTAATTCCAGTATGGTGATTCAATAATGTCTGCCTAAAATCGGGTAATTTTTTACAATAATCAATTTGATCTAGAAGGTGAGGAACTTTGCCTCATTTGTCAAGAGGTTAAGATAACTACAAGTTTGAAAAATAATCATTTGAACTGTACTGGGTAGATTTTAGTGATAAGTTGGATGATGGCCATGGTCATTAGCTCCTATTTTGAACAATGTGTTTTGATCATGTGACTATTTGGCGTAAGGTTTTTCACTTGGATTTCAGTTCATAAACCTTGAAACTGCAATTAACATATCTTCTCTAATTTCAGGTTTACTGATAAACAAATTGTGAGGCTTCAGGAGACACCTGACGAGATACCTGAAGGAGGAACGCCTCACACTGTTAGCTTGCTATTGCATGACAAACTGGTGGATACTGGAAAGCCAGGTGACAGAGTTGAGGTGAGACTATGCCATGACATACTCTGATAAATAGATATTCTTATGTTTGTTCAATCGTCCCATGAGTGTTTTGTTGTATATCAGGTGACTGGTATATACAGGGCTATGAGTGTCAGGGTAGGACCAACTCAGAGAACTGTTAAGTCATTGTTCAAAGTATGGGTTACCTTCTCAAACTCATTTGCATTTAAAGCTTCTGCGTTGCATTTTTCATCTTGTCTAATTGACATTTGTTTTGTTCTATTCATGTTGTAGACGTATATTGATTGTCTTCACATAAAAAAGACATCAAAGTCCCGGATGCTGGTTGAGGATGCTATGGAGGTTGACAATGGCCAGGGCAGAAATCCAGAAGAAGTTTTATTTGATGAAGAAAAGGTACATTTTGTACATCTCTTCAAGGAATTATCTGCTTGTTTTATTCACCTGCTAATTGATGCTTGTCTGAGTCTCAGGTGGCTAAACTGAAGGAGCTCTCAAAACAACCAGATATCTATGAAAGGCTGACAAAGTCACTGGCGCCAAACATCTGGGAGCTAGATGATGTAAAGAAAGGTCTTCTTTGCCAGGTAACACATCTTTCTAGCTACTCTTTCATTTGTTGTTTGACAAATATTCTGAGGATGCTAGTTTTTATTTTCTTGCAGCTTTTTGGGGGCAATGCTTTGAAGTTGGCATCTGGCGCTAGCTTTCGTGGTGATATAAATATTCTCCTTGTTGGTGATCCTGGTACAAGCAAGTCGCAGCTACTTCAGTACATACACAAACTTTCTCCACGTGGCATTTACACCAGTGGAAGGGGGAGCTCAGCGGTTGGATTGACTGCTTACGTGGCCAAAGATCCTGAAACAGGCGAAACTGTATAGACCAAGTCCATGATCTTTTAGTGTCTGTCTAATGTACAAGAAATGCAATGGAGTCTAATTTTTTCTGCTAAATCTTCAGGTTCTTGAGAGTGGTGCCCTAGTTTTGAGCGACCGAGGTATCTGTTGCATTGATGAATTTGACAAAATGTCTGACAATGCAAGGAGCATGTTACACGAGGTTGGTTTCATTTTTTGTCAGCATGTATTTCTGCAGTCCTATCTGCTTGTTTTTTCTACAAAACTTTGCATGGATTGAAAAATATATACACTATAATTTCATGCTTTACCATGTTAGCTTTGTACTTTTGACTAACCAATACACTTGTCTCTGTTTATTCCAGGTGATGGAACAACAAACTGTTTCAATAGCAAAGGCAGGCATTATTGCTTCCCTCAATGCAAGGACTTCGGTGTTGGCTTGCGCAAACCCTAGCGGTTCACGATATAATCCCCGCTTGTCTGTCATTGACAACATACACCTTCCTCCCACTCTTTTGTCCAGGTTAGTTGTTGGACATAAGTCGTGATAACTAGGTTATGACTCTGGCTACGTATTTATATGCAATTCCTCATGCATTGGCAGCAATCCATTTTATACCTTGGGCTTACCTCTATTTTTTAGGGTTTTCATTGTCATGCAACATAAGATTGAATCTGTTGTTGATTCTCTTTATCAAACCTAGTGTGGGTAGGGGTTGGCATAAAGCAAAAAATTCTCTTTAAAAATAAATGGAAGCTACTAGACAGTTTTGCAAGTGTTGCTATTGATTTGAGTTGATCTTTTTTCTGGCAGGTTTGATTTAATTTACTTAATGCTTGATAAGGCTGATGAACAGACCGACCGACGACTTGCCAAACATATTGTTTCCCTGCACTATAAGGATTATGAGGTCTGGTTATAATCTTGTAATCATCTTATTCAAGATTAAGATCCAAGCTTAAGTGTTTTTGCATACTCACTTAGAATGATGTGGCCATAATTGCAGAACATGGAGCAGGATGTGTTGGACATTTCTACACTAACTGATTATGTTAGCTATGCCCGAAAGTACATACACCCACAACTATCAGATGAAGCTGCTGATGAATTGATTACAGGCTATGTAAAAATAAGGGGTAGGGGAAAATTCTCCGGAAGTAGCAAAAAGGTGATACAAAGTGAATTACTTGATATTAGAATTATGCTTATTTTAATTTTTTTCTCTTCATGTTTCACTGTTGTGTATGTTAATCTTGCCTATCTATCAATTAATTAACAGGTAATAACGGCAACTCCAAGGCAGATTGAGAGTCTATTACGACTTAGTGAAGCATTGGCTCGGATTCGCTTCTCAGAATCGGTTAGTTTAGCTTGCTTGGTCTCTTCCTGATTTGCAGATAAAAAATAGCATGCAGAATTATTAAGTAACTTGTTGCACAGGTCGAAAAACATGATGTGGTGGAGGCATTTCGGCTTCTGGAAGTTGCAATGCAGCAATCTGCAATGGATACCAGAACTGGTAGTTATCCAAACAACCCCCTATACTCTATTGTATTCCACCAAATAAACTATATATGACTAAATCCTTTTATCTTCACAGGAACTATTGACATGGATCTCATAACTACTGGTGTTTCGGCAAGCGAAAGGATGAGGCGAGAAAGTTTGATTCAAGACACTCGCAACATGATCATGGAGAAGATGCAAATTGGGGGACGTTCCATGCGGTTATTGGAGGTATTACCATTCTTTCTAAAACATTTAGTATATATTATGTTCAGTTTGAGACAATGATCTAATATAATTTAAAATGATCACGCAGATATTGGAAGAACTAAAGAATCAGAGCCCTGGCAGCGAAATTCATCTTAATGATGTAAGCCCTTACCTTTGAGATTATTTTTACCAGTGTTTATGCTTGCTACATCCCTAAGGATAAGTGAACTAATGAGCTATTTCATGTTTAATGCAGCTAAGGAGTGCAGTTGCTACTCTCGCCAGCGAAGGATTTGTTTCCATGGCTGGTGACAGTGTAAAAAGAACATGA
Protein sequence

>MS.gene003675.t1

MASDSTPMDSNNGPSSPDNSNSSPIANTYSSPGRRRRRQSITPSGTPQPNRSRFATSDATPTPSRHRRGGGIPSGRRVPATPTSTSEDFPMSSEGGDGYDMDDAGPTYVWGTNISVEDVNDAIQRFLKHFREKSASQGGDDDLDMDLDIEGKYEKLIKQVIELEGESIDVDARDVFDHDHELYSKMVRYPLEVLAIFDMVLMNMVTRMNPMFEKHVQTRIFNLKSSTSMRNLNPSDIERMVSMKGMIIRCSSIIPEIREAIFRCLVCGFCSDPVPVERGRIAEPTVCLREECQSKNSMTLVHNRCKFTDKQIVRLQETPDEIPEGGTPHTVSLLLHDKLVDTGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTSKSRMLVEDAMEVDNGQGRNPEEVLFDEEKVAKLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVAKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEQTDRRLAKHIVSLHYKDYENMEQDVLDISTLTDYVSYARKYIHPQLSDEAADELITGYVKIRGRGKFSGSSKKVITATPRQIESLLRLSEALARIRFSESVEKHDVVEAFRLLEVAMQQSAMDTRTGTIDMDLITTGVSASERMRRESLIQDTRNMIMEKMQIGGRSMRLLEILEELKNQSPGSEIHLNDLRSAVATLASEGFVSMAGDSVKRT