Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004176.t1 | XP_024631490.1 | 93.8 | 306 | 19 | 0 | 1 | 306 | 2 | 307 | 3.10E-166 | 594.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004176.t1 | Q6AY46 | 45.6 | 294 | 145 | 6 | 10 | 300 | 4 | 285 | 6.1e-62 | 239.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004176.t1 | A2Q516 | 93.8 | 306 | 19 | 0 | 1 | 306 | 2 | 307 | 2.2e-166 | 594.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004176 | MS.gene27063 | PPI |
| MS.gene004176 | MS.gene30096 | PPI |
| MS.gene004176 | MS.gene64008 | PPI |
| MS.gene027187 | MS.gene004176 | PPI |
| MS.gene24165 | MS.gene004176 | PPI |
| MS.gene004176 | MS.gene82633 | PPI |
| MS.gene004176 | MS.gene64211 | PPI |
| MS.gene21989 | MS.gene004176 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004176.t1 | MTR_6g047800 | 77.670 | 309 | 63 | 4 | 1 | 303 | 1 | 309 | 4.59e-172 | 479 |
| MS.gene004176.t1 | MTR_6g047800 | 78.667 | 300 | 58 | 4 | 10 | 303 | 1 | 300 | 5.35e-169 | 471 |
| MS.gene004176.t1 | MTR_2g014590 | 92.641 | 231 | 17 | 0 | 1 | 231 | 2 | 232 | 2.17e-160 | 446 |
| MS.gene004176.t1 | MTR_2g014570 | 98.361 | 61 | 1 | 0 | 246 | 306 | 6 | 66 | 2.03e-38 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004176.t1 | AT5G14600 | 68.868 | 318 | 87 | 2 | 1 | 306 | 1 | 318 | 2.78e-164 | 459 |
Find 59 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGCTTGGTTCTTGAATC+TGG | 0.235361 | 2.4:+70278131 | MS.gene004176:CDS |
| CTCTAAAGTATTCAACAATA+AGG | 0.250501 | 2.4:+70277986 | MS.gene004176:CDS |
| GATTAATCAGTTGTGGAGTT+AGG | 0.260288 | 2.4:+70279784 | MS.gene004176:CDS |
| TTGTGGAGTTAGGGACATTC+AGG | 0.262187 | 2.4:+70279794 | MS.gene004176:CDS |
| GATTGGATTGGAAAGCCTTT+TGG | 0.269508 | 2.4:+70277963 | MS.gene004176:CDS |
| TAGCTCCCACACCAGAATTA+TGG | 0.286409 | 2.4:+70278027 | MS.gene004176:CDS |
| GGATTTCCTGATGAGTTTAA+TGG | 0.286421 | 2.4:+70279822 | MS.gene004176:CDS |
| AACACTAGAGTCCATAATTC+TGG | 0.292506 | 2.4:-70278038 | None:intergenic |
| CAGATGCTGCCCTTTGTTCA+TGG | 0.315015 | 2.4:-70278229 | None:intergenic |
| TCCTGATGAGTTTAATGGCT+TGG | 0.351169 | 2.4:+70279827 | MS.gene004176:CDS |
| ATGTATTTGGAGATTGTTCC+TGG | 0.387434 | 2.4:+70278110 | MS.gene004176:CDS |
| GTGAAGACGAAAAGCTTTCA+TGG | 0.388067 | 2.4:+70281957 | MS.gene004176:CDS |
| CTTGAATCTGGAACTGGTAG+TGG | 0.396327 | 2.4:+70278143 | MS.gene004176:CDS |
| CGTTGTACTTGTTCGATACA+TGG | 0.406361 | 2.4:-70279945 | None:intergenic |
| TTTAAACATTCTGATTGGAT+TGG | 0.406520 | 2.4:+70277951 | MS.gene004176:CDS |
| AATGTTTAAAAGCACCTAAA+GGG | 0.409810 | 2.4:-70277938 | None:intergenic |
| CTTTGACTACTTCACTTGCT+AGG | 0.430680 | 2.4:+70278168 | MS.gene004176:CDS |
| TCTAAAGTATTCAACAATAA+GGG | 0.439227 | 2.4:+70277987 | MS.gene004176:CDS |
| ATTAATCAGTTGTGGAGTTA+GGG | 0.447067 | 2.4:+70279785 | MS.gene004176:CDS |
| GCCAAGCCATTAAACTCATC+AGG | 0.456967 | 2.4:-70279828 | None:intergenic |
| GAATGTTTAAAAGCACCTAA+AGG | 0.458705 | 2.4:-70277939 | None:intergenic |
| GATTGCTGTCACGAATTGTT+CGG | 0.459234 | 2.4:-70277845 | None:intergenic |
| GGAGATTGTTCCTGGTTGCT+TGG | 0.459797 | 2.4:+70278118 | MS.gene004176:CDS |
| TTGGTTCTTGAATCTGGAAC+TGG | 0.463211 | 2.4:+70278137 | MS.gene004176:CDS |
| GCACTTCAGTCCTGCTTCAC+AGG | 0.472308 | 2.4:+70279978 | MS.gene004176:CDS |
| TTGAATACTTTAGAGCCAAA+AGG | 0.478439 | 2.4:-70277978 | None:intergenic |
| AATGTATAAACATGTCCGTT+TGG | 0.481340 | 2.4:-70278200 | None:intergenic |
| GAAAGATATAAAGACATTTG+AGG | 0.513281 | 2.4:+70281905 | MS.gene004176:intron |
| ATTTGATTTCCATGAACAAA+GGG | 0.526401 | 2.4:+70278220 | MS.gene004176:CDS |
| GCTAGGGCAGTTGCGCCAAA+CGG | 0.528305 | 2.4:+70278185 | MS.gene004176:CDS |
| CATTTGATTTCCATGAACAA+AGG | 0.531378 | 2.4:+70278219 | MS.gene004176:CDS |
| GCGAAATTGCTTAAACAAGA+TGG | 0.531846 | 2.4:+70279903 | MS.gene004176:CDS |
| CAATTTCGCAGCTGAAGGAA+TGG | 0.532537 | 2.4:-70279889 | None:intergenic |
| CAATCCTACTTCTTCTGTCA+TGG | 0.536704 | 2.4:+70282043 | MS.gene004176:CDS |
| CCTAAAAGTACCTGTGAAGC+AGG | 0.543977 | 2.4:-70279988 | None:intergenic |
| GTTAGGGACATTCAGGGTGA+GGG | 0.545604 | 2.4:+70279801 | MS.gene004176:CDS |
| TTTGACTACTTCACTTGCTA+GGG | 0.548143 | 2.4:+70278169 | MS.gene004176:CDS |
| TTAAGCAATTTCGCAGCTGA+AGG | 0.548743 | 2.4:-70279894 | None:intergenic |
| GAAAGCTGTAACAGTGTCTG+AGG | 0.556493 | 2.4:+70277899 | MS.gene004176:CDS |
| TGTGGAGTTAGGGACATTCA+GGG | 0.558563 | 2.4:+70279795 | MS.gene004176:CDS |
| TTAAGCAGATTAATCAGTTG+TGG | 0.568079 | 2.4:+70279777 | MS.gene004176:CDS |
| GGACTCTAGTGTTAAATCAC+AGG | 0.580184 | 2.4:+70278048 | MS.gene004176:CDS |
| AGAGTCCATAATTCTGGTGT+GGG | 0.584035 | 2.4:-70278032 | None:intergenic |
| TAGAGTCCATAATTCTGGTG+TGG | 0.585946 | 2.4:-70278033 | None:intergenic |
| AGTTAGGGACATTCAGGGTG+AGG | 0.591437 | 2.4:+70279800 | MS.gene004176:CDS |
| GGAATGGCTAACCAAGGTTG+AGG | 0.592393 | 2.4:-70279873 | None:intergenic |
| GTTATTGTTTACGTAAAACA+TGG | 0.594494 | 2.4:+70277870 | MS.gene004176:CDS |
| CTAGCCATGACAGAAGAAGT+AGG | 0.599460 | 2.4:-70282047 | None:intergenic |
| AACAAAGGGCAGCATCTGCT+AGG | 0.601675 | 2.4:+70278234 | MS.gene004176:CDS |
| AAGAGAAGACAGTGTTCAGA+TGG | 0.602416 | 2.4:+70282005 | MS.gene004176:CDS |
| GAACACTGTCTTCTCTTGCA+AGG | 0.615282 | 2.4:-70281999 | None:intergenic |
| GATTCAAGAACCAAGCAACC+AGG | 0.619604 | 2.4:-70278128 | None:intergenic |
| TGACCTCTAGCCTCATCACA+AGG | 0.640370 | 2.4:-70282071 | None:intergenic |
| CATGGCTAGACCTTGTGATG+AGG | 0.646852 | 2.4:+70282061 | MS.gene004176:CDS |
| AAAGCTGTAACAGTGTCTGA+GGG | 0.675726 | 2.4:+70277900 | MS.gene004176:CDS |
| AGACCTTGTGATGAGGCTAG+AGG | 0.676272 | 2.4:+70282068 | MS.gene004176:CDS |
| AGCTTTCATGGAGATGACAG+TGG | 0.682269 | 2.4:+70281969 | MS.gene004176:CDS |
| GCTGAAGGAATGGCTAACCA+AGG | 0.691556 | 2.4:-70279879 | None:intergenic |
| GATGAGGCTAGAGGTCACAC+AGG | 0.703330 | 2.4:+70282077 | MS.gene004176:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATTTAATATT+TGG | - | chr2.4:70278754-70278773 | None:intergenic | 0.0% |
| !! | ACATAAAATACAATTAATTT+AGG | + | chr2.4:70281844-70281863 | MS.gene004176:intron | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | chr2.4:70279165-70279184 | MS.gene004176:intron | 10.0% |
| !! | TGATTTAAATTTCTTATATA+TGG | + | chr2.4:70279592-70279611 | MS.gene004176:intron | 10.0% |
| !!! | TTTTTTAGAAACTTAATATA+TGG | + | chr2.4:70278430-70278449 | MS.gene004176:intron | 10.0% |
| !! | AAAATCAGAAAATATATATG+AGG | - | chr2.4:70280230-70280249 | None:intergenic | 15.0% |
| !! | AGAATAAATAGAATAGAATA+TGG | - | chr2.4:70281811-70281830 | None:intergenic | 15.0% |
| !! | GAATAAATAGAATAGAATAT+GGG | - | chr2.4:70281810-70281829 | None:intergenic | 15.0% |
| !! | TCGAAAAAATATATATTCAT+TGG | + | chr2.4:70280365-70280384 | MS.gene004176:intron | 15.0% |
| !!! | TAATTTGTTAATTATTTGCA+GGG | + | chr2.4:70279734-70279753 | MS.gene004176:intron | 15.0% |
| !!! | TAGTTTTGTTATTATGTATT+TGG | + | chr2.4:70278097-70278116 | MS.gene004176:CDS | 15.0% |
| !!! | TTAATTTGTTAATTATTTGC+AGG | + | chr2.4:70279733-70279752 | MS.gene004176:intron | 15.0% |
| !! | AAGTGCATTTAAAAATAGAT+TGG | - | chr2.4:70280175-70280194 | None:intergenic | 20.0% |
| !! | AATTCTTCTAATCAATTCTT+TGG | + | chr2.4:70280790-70280809 | MS.gene004176:intron | 20.0% |
| !! | ACTGTATTAAGAGATATAAA+AGG | + | chr2.4:70281713-70281732 | MS.gene004176:intron | 20.0% |
| !! | ATTCTTCTAATCAATTCTTT+GGG | + | chr2.4:70280791-70280810 | MS.gene004176:intron | 20.0% |
| !! | CATAAGCAAAATATAAACAT+TGG | - | chr2.4:70281884-70281903 | None:intergenic | 20.0% |
| !! | CTGTATTAAGAGATATAAAA+GGG | + | chr2.4:70281714-70281733 | MS.gene004176:intron | 20.0% |
| !! | TAACAAAATTGTGTAACAAA+GGG | + | chr2.4:70281679-70281698 | MS.gene004176:intron | 20.0% |
| !! | TACTTCATTATTCAAAATCT+TGG | + | chr2.4:70279499-70279518 | MS.gene004176:intron | 20.0% |
| !! | TATGTTATTAGAAAGTAAAC+AGG | - | chr2.4:70280015-70280034 | None:intergenic | 20.0% |
| !! | TGTATTAAGAGATATAAAAG+GGG | + | chr2.4:70281715-70281734 | MS.gene004176:intron | 20.0% |
| !! | TTAACTATCCTAATATTTGA+TGG | - | chr2.4:70281227-70281246 | None:intergenic | 20.0% |
| !!! | TCTAAAGTATTCAACAATAA+GGG | + | chr2.4:70277987-70278006 | MS.gene004176:CDS | 20.0% |
| !!! | TTCATTTTTACTTTGTATGA+AGG | + | chr2.4:70280035-70280054 | MS.gene004176:intron | 20.0% |
| ! | AAACATTGGAATATGTTAGT+AGG | - | chr2.4:70281870-70281889 | None:intergenic | 25.0% |
| ! | AAACCCTAATTTCTTAGAAA+GGG | - | chr2.4:70278971-70278990 | None:intergenic | 25.0% |
| ! | AAACTACAGAGAATACATTT+CGG | + | chr2.4:70280119-70280138 | MS.gene004176:intron | 25.0% |
| ! | AACAAAATTGTGTAACAAAG+GGG | + | chr2.4:70281680-70281699 | MS.gene004176:intron | 25.0% |
| ! | ACATTTCCTTTATCTTTCTT+TGG | + | chr2.4:70278901-70278920 | MS.gene004176:intron | 25.0% |
| ! | AGCAATAAGAGATAGAAAAA+GGG | + | chr2.4:70280481-70280500 | MS.gene004176:intron | 25.0% |
| ! | CTAACAAAATTGTGTAACAA+AGG | + | chr2.4:70281678-70281697 | MS.gene004176:intron | 25.0% |
| ! | GAAAGATATAAAGACATTTG+AGG | + | chr2.4:70281905-70281924 | MS.gene004176:intron | 25.0% |
| ! | GAACAATTTGAATTATAAGC+TGG | - | chr2.4:70280939-70280958 | None:intergenic | 25.0% |
| ! | GTTATTGTTTACGTAAAACA+TGG | + | chr2.4:70277870-70277889 | MS.gene004176:CDS | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr2.4:70279244-70279263 | None:intergenic | 25.0% |
| ! | TCTCTTGATCATAACTAAAA+AGG | - | chr2.4:70280089-70280108 | None:intergenic | 25.0% |
| ! | TGAATTTATTGATGAAACTC+TGG | + | chr2.4:70280399-70280418 | MS.gene004176:intron | 25.0% |
| ! | TTCCAAAATAATTTCCTCTA+TGG | + | chr2.4:70281309-70281328 | MS.gene004176:intron | 25.0% |
| ! | TTTAAACATTCTGATTGGAT+TGG | + | chr2.4:70277951-70277970 | MS.gene004176:CDS | 25.0% |
| ! | TTTAATATTTGGATACTCTC+CGG | - | chr2.4:70278743-70278762 | None:intergenic | 25.0% |
| !! | ATTTGATTTCCATGAACAAA+GGG | + | chr2.4:70278220-70278239 | MS.gene004176:CDS | 25.0% |
| !! | CTTAAAGCAATTTTTCTCAA+GGG | - | chr2.4:70280888-70280907 | None:intergenic | 25.0% |
| !! | TCTTAAAGCAATTTTTCTCA+AGG | - | chr2.4:70280889-70280908 | None:intergenic | 25.0% |
| !! | TTCCATAGAGGAAATTATTT+TGG | - | chr2.4:70281314-70281333 | None:intergenic | 25.0% |
| !! | TTCTTTTCTTCCTATGATAA+GGG | + | chr2.4:70279669-70279688 | MS.gene004176:intron | 25.0% |
| !! | TTTCCCTTTCTAAGAAATTA+GGG | + | chr2.4:70278965-70278984 | MS.gene004176:intron | 25.0% |
| !! | TTTCTTTTCTTCCTATGATA+AGG | + | chr2.4:70279668-70279687 | MS.gene004176:intron | 25.0% |
| !! | TTTTACTAAATAGCGTATCA+CGG | - | chr2.4:70278367-70278386 | None:intergenic | 25.0% |
| !!! | AATGTTTAAAAGCACCTAAA+GGG | - | chr2.4:70277941-70277960 | None:intergenic | 25.0% |
| !!! | AATTATTTTGGAAATGGAGA+TGG | - | chr2.4:70281302-70281321 | None:intergenic | 25.0% |
| !!! | AGAGGAAATTATTTTGGAAA+TGG | - | chr2.4:70281308-70281327 | None:intergenic | 25.0% |
| !!! | CTCTAAAGTATTCAACAATA+AGG | + | chr2.4:70277986-70278005 | MS.gene004176:CDS | 25.0% |
| !!! | TAAAGTACTAACTTGTTGAT+TGG | + | chr2.4:70280679-70280698 | MS.gene004176:intron | 25.0% |
| !!! | TTTTTCGAACAAGCTAAAAT+GGG | - | chr2.4:70280353-70280372 | None:intergenic | 25.0% |
| !!! | TTTTTTCGAACAAGCTAAAA+TGG | - | chr2.4:70280354-70280373 | None:intergenic | 25.0% |
| AATATTGACGATTAAGAGAG+TGG | - | chr2.4:70279094-70279113 | None:intergenic | 30.0% | |
| AATCAGAGTTGTGTTACAAA+AGG | + | chr2.4:70280433-70280452 | MS.gene004176:intron | 30.0% | |
| AATGTATAAACATGTCCGTT+TGG | - | chr2.4:70278203-70278222 | None:intergenic | 30.0% | |
| AGTACTGTTATGATGAATGA+AGG | - | chr2.4:70280754-70280773 | None:intergenic | 30.0% | |
| ATCAGAGTTGTGTTACAAAA+GGG | + | chr2.4:70280434-70280453 | MS.gene004176:intron | 30.0% | |
| ATTAATCAGTTGTGGAGTTA+GGG | + | chr2.4:70279785-70279804 | MS.gene004176:CDS | 30.0% | |
| ATTACCAAGTCTCAAACAAA+AGG | - | chr2.4:70280982-70281001 | None:intergenic | 30.0% | |
| ATTCATAGCAATTCTGATCT+TGG | - | chr2.4:70281536-70281555 | None:intergenic | 30.0% | |
| ATTTACTGGATAATTGCTTG+TGG | + | chr2.4:70281625-70281644 | MS.gene004176:intron | 30.0% | |
| GAAACCCTAATTTCTTAGAA+AGG | - | chr2.4:70278972-70278991 | None:intergenic | 30.0% | |
| GAAACTTAATATATGGTCCA+AGG | + | chr2.4:70278437-70278456 | MS.gene004176:intron | 30.0% | |
| GAATTCTATCAGAATCAGTT+TGG | + | chr2.4:70280317-70280336 | MS.gene004176:intron | 30.0% | |
| GAGCAATAAGAGATAGAAAA+AGG | + | chr2.4:70280480-70280499 | MS.gene004176:intron | 30.0% | |
| GGTAGTAATTAATGGTTACA+AGG | - | chr2.4:70281515-70281534 | None:intergenic | 30.0% | |
| GTACTGTTATGATGAATGAA+GGG | - | chr2.4:70280753-70280772 | None:intergenic | 30.0% | |
| TACTGTTATGATGAATGAAG+GGG | - | chr2.4:70280752-70280771 | None:intergenic | 30.0% | |
| TATCCTAATATTTGATGGAG+AGG | - | chr2.4:70281222-70281241 | None:intergenic | 30.0% | |
| TGGATTTATTGACGAAACTT+TGG | + | chr2.4:70281645-70281664 | MS.gene004176:intron | 30.0% | |
| TTAAGCAGATTAATCAGTTG+TGG | + | chr2.4:70279777-70279796 | MS.gene004176:CDS | 30.0% | |
| TTACCAAGTCTCAAACAAAA+GGG | - | chr2.4:70280981-70281000 | None:intergenic | 30.0% | |
| TTACTTTGTATGAAGGTAGA+TGG | + | chr2.4:70280042-70280061 | MS.gene004176:intron | 30.0% | |
| TTCTACATAACCCTTATCAT+AGG | - | chr2.4:70279682-70279701 | None:intergenic | 30.0% | |
| TTGTCAAATAGCAGTTACAT+AGG | + | chr2.4:70278390-70278409 | MS.gene004176:intron | 30.0% | |
| TTGTGCATGAAATTCTACTT+TGG | - | chr2.4:70281069-70281088 | None:intergenic | 30.0% | |
| ! | AATTTCTGCCATTTCTGTTT+GGG | + | chr2.4:70281245-70281264 | MS.gene004176:intron | 30.0% |
| ! | CAGTTTTACTCTTGATTTAC+TGG | + | chr2.4:70281611-70281630 | MS.gene004176:intron | 30.0% |
| ! | CATTTGATTTCCATGAACAA+AGG | + | chr2.4:70278219-70278238 | MS.gene004176:CDS | 30.0% |
| ! | CTGATCTTGGTAGTAATTAA+TGG | - | chr2.4:70281523-70281542 | None:intergenic | 30.0% |
| ! | CTTTCCCTTTCTAAGAAATT+AGG | + | chr2.4:70278964-70278983 | MS.gene004176:intron | 30.0% |
| ! | GTGCTTTTAAACATTCTGAT+TGG | + | chr2.4:70277946-70277965 | MS.gene004176:CDS | 30.0% |
| ! | TAATTTCTGCCATTTCTGTT+TGG | + | chr2.4:70281244-70281263 | MS.gene004176:intron | 30.0% |
| !! | AACTTTATTCTGGCTTCAAT+TGG | - | chr2.4:70278509-70278528 | None:intergenic | 30.0% |
| !! | AAGAGCGTTTAGAAGATTAA+TGG | - | chr2.4:70280591-70280610 | None:intergenic | 30.0% |
| !! | ACTTTATTCTGGCTTCAATT+GGG | - | chr2.4:70278508-70278527 | None:intergenic | 30.0% |
| !! | AGTGGAACGATATTTTGAAT+TGG | - | chr2.4:70281177-70281196 | None:intergenic | 30.0% |
| !! | GAACGATATTTTGAATTGGA+GGG | - | chr2.4:70281173-70281192 | None:intergenic | 30.0% |
| !! | GAATGTTTAAAAGCACCTAA+AGG | - | chr2.4:70277942-70277961 | None:intergenic | 30.0% |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | + | chr2.4:70278989-70279008 | MS.gene004176:intron | 30.0% |
| !! | TTGAATACTTTAGAGCCAAA+AGG | - | chr2.4:70277981-70278000 | None:intergenic | 30.0% |
| AACACTAGAGTCCATAATTC+TGG | - | chr2.4:70278041-70278060 | None:intergenic | 35.0% | |
| AATTGCTATGAATAACGACC+TGG | + | chr2.4:70281543-70281562 | MS.gene004176:intron | 35.0% | |
| ACAGTGGATAGCAAAAAATG+TGG | - | chr2.4:70279363-70279382 | None:intergenic | 35.0% | |
| ACTGTTATGATGAATGAAGG+GGG | - | chr2.4:70280751-70280770 | None:intergenic | 35.0% | |
| AGAGAAGTTTGAATCACAGA+AGG | - | chr2.4:70281394-70281413 | None:intergenic | 35.0% | |
| AGGACGACATGATCATTTAT+GGG | - | chr2.4:70280614-70280633 | None:intergenic | 35.0% | |
| AGTACTTTAGACAAAGTCCT+TGG | - | chr2.4:70280668-70280687 | None:intergenic | 35.0% | |
| ATGTATTTGGAGATTGTTCC+TGG | + | chr2.4:70278110-70278129 | MS.gene004176:CDS | 35.0% | |
| CATCCTCTCCATCAAATATT+AGG | + | chr2.4:70281216-70281235 | MS.gene004176:intron | 35.0% | |
| CCACTATTGATACCTTGTAA+GGG | + | chr2.4:70281094-70281113 | MS.gene004176:intron | 35.0% | |
| GAAAGATGCAATTGTTTGTG+TGG | - | chr2.4:70278949-70278968 | None:intergenic | 35.0% | |
| GAACATGATCAATTCCATAG+AGG | - | chr2.4:70281326-70281345 | None:intergenic | 35.0% | |
| GATTAATCAGTTGTGGAGTT+AGG | + | chr2.4:70279784-70279803 | MS.gene004176:CDS | 35.0% | |
| GCGAAATTGCTTAAACAAGA+TGG | + | chr2.4:70279903-70279922 | MS.gene004176:CDS | 35.0% | |
| GGATTTCCTGATGAGTTTAA+TGG | + | chr2.4:70279822-70279841 | MS.gene004176:CDS | 35.0% | |
| GTACTTTAGACAAAGTCCTT+GGG | - | chr2.4:70280667-70280686 | None:intergenic | 35.0% | |
| TACCAAGTCTCAAACAAAAG+GGG | - | chr2.4:70280980-70280999 | None:intergenic | 35.0% | |
| TACCAGTGTTAGAATCAGTT+TGG | + | chr2.4:70281582-70281601 | MS.gene004176:intron | 35.0% | |
| TATTTCCTTAGTCACACGTA+AGG | + | chr2.4:70279561-70279580 | MS.gene004176:intron | 35.0% | |
| TGCATGAAATTCTACTTTGG+AGG | - | chr2.4:70281066-70281085 | None:intergenic | 35.0% | |
| TGTCAGCATAAAGTTCTACA+CGG | - | chr2.4:70279394-70279413 | None:intergenic | 35.0% | |
| TTCCATTGAAGAATCTAGTG+CGG | - | chr2.4:70280638-70280657 | None:intergenic | 35.0% | |
| TTTGAATCACAGAAGGATTG+AGG | - | chr2.4:70281387-70281406 | None:intergenic | 35.0% | |
| ! | AATTTTTCTCAAGGGACTGA+AGG | - | chr2.4:70280880-70280899 | None:intergenic | 35.0% |
| ! | AGAAAAAGCACACAAAGATG+AGG | - | chr2.4:70280253-70280272 | None:intergenic | 35.0% |
| ! | ATTTCTGCCATTTCTGTTTG+GGG | + | chr2.4:70281246-70281265 | MS.gene004176:intron | 35.0% |
| ! | CCTTACAAGGTATCAATAGT+GGG | - | chr2.4:70281096-70281115 | None:intergenic | 35.0% |
| ! | TTCTACTTTGGAGGATTTGA+AGG | - | chr2.4:70281057-70281076 | None:intergenic | 35.0% |
| ! | TTTGACTACTTCACTTGCTA+GGG | + | chr2.4:70278169-70278188 | MS.gene004176:CDS | 35.0% |
| !! | AGACTTGGTAATGATTCACA+AGG | + | chr2.4:70280990-70281009 | MS.gene004176:intron | 35.0% |
| !! | CTTGGCTGATTCTGTATTTT+TGG | + | chr2.4:70279845-70279864 | MS.gene004176:CDS | 35.0% |
| !! | GACTTGGTAATGATTCACAA+GGG | + | chr2.4:70280991-70281010 | MS.gene004176:intron | 35.0% |
| !! | GGAACGATATTTTGAATTGG+AGG | - | chr2.4:70281174-70281193 | None:intergenic | 35.0% |
| !! | TATTTTGAATTGGAGGGTGT+AGG | - | chr2.4:70281167-70281186 | None:intergenic | 35.0% |
| !! | TCAGTTTTTCAGAACCCTTT+AGG | + | chr2.4:70277924-70277943 | MS.gene004176:CDS | 35.0% |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | - | chr2.4:70278663-70278682 | None:intergenic | 35.0% |
| !!! | GTCATCCATTTTGAAGTATC+GGG | - | chr2.4:70278662-70278681 | None:intergenic | 35.0% |
| !!! | TCATCCATTTTGAAGTATCG+GGG | - | chr2.4:70278661-70278680 | None:intergenic | 35.0% |
| !!! | TTTTTAGAACGTGCCTATGA+AGG | - | chr2.4:70281468-70281487 | None:intergenic | 35.0% |
| AAACTCCTTACCAGAGATGA+TGG | - | chr2.4:70280823-70280842 | None:intergenic | 40.0% | |
| AAAGCTGTAACAGTGTCTGA+GGG | + | chr2.4:70277900-70277919 | MS.gene004176:CDS | 40.0% | |
| AAATCAAGATACGATACGGC+TGG | - | chr2.4:70279240-70279259 | None:intergenic | 40.0% | |
| AACGCGAGAAAAATCAAGGT+TGG | - | chr2.4:70280561-70280580 | None:intergenic | 40.0% | |
| AAGAGAAGACAGTGTTCAGA+TGG | + | chr2.4:70282005-70282024 | MS.gene004176:CDS | 40.0% | |
| AATCAAGATACGATACGGCT+GGG | - | chr2.4:70279239-70279258 | None:intergenic | 40.0% | |
| AATGGTTACAAGGTGCAGAA+TGG | - | chr2.4:70281505-70281524 | None:intergenic | 40.0% | |
| ACACAAGTATCCGTGTGTAT+CGG | - | chr2.4:70278801-70278820 | None:intergenic | 40.0% | |
| AGAGTCCATAATTCTGGTGT+GGG | - | chr2.4:70278035-70278054 | None:intergenic | 40.0% | |
| AGCCAGAATAAAGTTCTGTG+TGG | + | chr2.4:70278514-70278533 | MS.gene004176:intron | 40.0% | |
| ATAGTCCATCATCTCTGGTA+AGG | + | chr2.4:70280815-70280834 | MS.gene004176:intron | 40.0% | |
| ATCTCTGGTAAGGAGTTTAC+TGG | + | chr2.4:70280825-70280844 | MS.gene004176:intron | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | - | chr2.4:70278944-70278963 | None:intergenic | 40.0% | |
| ATGTTAATGTGCTACGAGTC+TGG | + | chr2.4:70279124-70279143 | MS.gene004176:intron | 40.0% | |
| CAATCCTACTTCTTCTGTCA+TGG | + | chr2.4:70282043-70282062 | MS.gene004176:CDS | 40.0% | |
| CAATCTCTATTTCCTCTTCC+TGG | - | chr2.4:70278267-70278286 | None:intergenic | 40.0% | |
| CCCACTATTGATACCTTGTA+AGG | + | chr2.4:70281093-70281112 | MS.gene004176:intron | 40.0% | |
| CGTTGTACTTGTTCGATACA+TGG | - | chr2.4:70279948-70279967 | None:intergenic | 40.0% | |
| CTGAAACGCGAGAAAAATCA+AGG | - | chr2.4:70280565-70280584 | None:intergenic | 40.0% | |
| CTGGCACCAAAGAAAGATAA+AGG | - | chr2.4:70278910-70278929 | None:intergenic | 40.0% | |
| CTTTGACTACTTCACTTGCT+AGG | + | chr2.4:70278168-70278187 | MS.gene004176:CDS | 40.0% | |
| GAGGACGACATGATCATTTA+TGG | - | chr2.4:70280615-70280634 | None:intergenic | 40.0% | |
| GATTGCTGTCACGAATTGTT+CGG | - | chr2.4:70277848-70277867 | None:intergenic | 40.0% | |
| GGACTCTAGTGTTAAATCAC+AGG | + | chr2.4:70278048-70278067 | MS.gene004176:CDS | 40.0% | |
| GTACGAGAGGATTTCAAATC+TGG | - | chr2.4:70281272-70281291 | None:intergenic | 40.0% | |
| GTCCACACAGAACTTTATTC+TGG | - | chr2.4:70278519-70278538 | None:intergenic | 40.0% | |
| GTGAAGACGAAAAGCTTTCA+TGG | + | chr2.4:70281957-70281976 | MS.gene004176:CDS | 40.0% | |
| GTGCCAACAATTTCTGTGTT+GGG | - | chr2.4:70278545-70278564 | None:intergenic | 40.0% | |
| TAGAGTCCATAATTCTGGTG+TGG | - | chr2.4:70278036-70278055 | None:intergenic | 40.0% | |
| TAGCCCAACACAGAAATTGT+TGG | + | chr2.4:70278539-70278558 | MS.gene004176:intron | 40.0% | |
| TATCAGAAAGCAGTTGATCC+AGG | - | chr2.4:70281564-70281583 | None:intergenic | 40.0% | |
| TATGGCCATGTATCCTTCAT+AGG | + | chr2.4:70281452-70281471 | MS.gene004176:intron | 40.0% | |
| TCCAAGGATCGATTAATCCA+GGG | + | chr2.4:70278453-70278472 | MS.gene004176:intron | 40.0% | |
| TCCATTGAAGAATCTAGTGC+GGG | - | chr2.4:70280637-70280656 | None:intergenic | 40.0% | |
| TCCTGATGAGTTTAATGGCT+TGG | + | chr2.4:70279827-70279846 | MS.gene004176:CDS | 40.0% | |
| TCTCTGGTAAGGAGTTTACT+GGG | + | chr2.4:70280826-70280845 | MS.gene004176:intron | 40.0% | |
| TTAAGCAATTTCGCAGCTGA+AGG | - | chr2.4:70279897-70279916 | None:intergenic | 40.0% | |
| TTCAATGGAACTGTTTCCCA+AGG | + | chr2.4:70280648-70280667 | MS.gene004176:intron | 40.0% | |
| ! | AAGGTTGGTTGAGAGAGAAT+AGG | - | chr2.4:70280546-70280565 | None:intergenic | 40.0% |
| ! | ACTGAAAATAACTGCCGACT+AGG | + | chr2.4:70280509-70280528 | MS.gene004176:intron | 40.0% |
| ! | ATTTTCCCGTATCAGCGTAT+CGG | + | chr2.4:70279265-70279284 | MS.gene004176:intron | 40.0% |
| ! | CCCTTACAAGGTATCAATAG+TGG | - | chr2.4:70281097-70281116 | None:intergenic | 40.0% |
| ! | CTCCTGATTTTCCTTCTGTA+TGG | + | chr2.4:70281434-70281453 | MS.gene004176:intron | 40.0% |
| ! | GTCCAAACTGATTCTAACAC+TGG | - | chr2.4:70281587-70281606 | None:intergenic | 40.0% |
| ! | TTGGTTCTTGAATCTGGAAC+TGG | + | chr2.4:70278137-70278156 | MS.gene004176:CDS | 40.0% |
| !! | AGGGACGATTTTGAGAGAAT+AGG | + | chr2.4:70279753-70279772 | MS.gene004176:intron | 40.0% |
| !! | GATTGGATTGGAAAGCCTTT+TGG | + | chr2.4:70277963-70277982 | MS.gene004176:CDS | 40.0% |
| !! | TTCACAAGGGTTCTGAAGTA+TGG | + | chr2.4:70281004-70281023 | MS.gene004176:intron | 40.0% |
| !!! | GCGGGCAGTTTTTTTTTCTT+CGG | - | chr2.4:70281746-70281765 | None:intergenic | 40.0% |
| !!! | GGGGGATATCTGGTTTTTTT+GGG | - | chr2.4:70281783-70281802 | None:intergenic | 40.0% |
| AACTAACAGAACTGCGACGT+GGG | - | chr2.4:70280707-70280726 | None:intergenic | 45.0% | |
| AATCTGGCCCCAAACAGAAA+TGG | - | chr2.4:70281256-70281275 | None:intergenic | 45.0% | |
| ACACAGAAATTGTTGGCACC+TGG | + | chr2.4:70278546-70278565 | MS.gene004176:intron | 45.0% | |
| ACAGAAATTGTTGGCACCTG+GGG | + | chr2.4:70278548-70278567 | MS.gene004176:intron | 45.0% | |
| ACGTGCCTATGAAGGATACA+TGG | - | chr2.4:70281460-70281479 | None:intergenic | 45.0% | |
| AGCTTTCATGGAGATGACAG+TGG | + | chr2.4:70281969-70281988 | MS.gene004176:CDS | 45.0% | |
| AGGATACATGGCCATACAGA+AGG | - | chr2.4:70281448-70281467 | None:intergenic | 45.0% | |
| AGGCTCTCTTAACTCCTAGT+CGG | - | chr2.4:70280526-70280545 | None:intergenic | 45.0% | |
| ATAAGCTGGACCACTCGTAA+GGG | - | chr2.4:70280925-70280944 | None:intergenic | 45.0% | |
| ATACTCTCCGGATACGTATC+GGG | - | chr2.4:70278731-70278750 | None:intergenic | 45.0% | |
| ATTGAAGAATCTAGTGCGGG+AGG | - | chr2.4:70280634-70280653 | None:intergenic | 45.0% | |
| CAAGGGACTGAAGGATGTAA+TGG | - | chr2.4:70280871-70280890 | None:intergenic | 45.0% | |
| CAATTTCGCAGCTGAAGGAA+TGG | - | chr2.4:70279892-70279911 | None:intergenic | 45.0% | |
| CACAAGTATCCGTGTGTATC+GGG | - | chr2.4:70278800-70278819 | None:intergenic | 45.0% | |
| CACAGAAATTGTTGGCACCT+GGG | + | chr2.4:70278547-70278566 | MS.gene004176:intron | 45.0% | |
| CAGAAGGATTGAGGAATTGC+TGG | - | chr2.4:70281378-70281397 | None:intergenic | 45.0% | |
| CAGTATCGTATCTCGTATCC+GGG | + | chr2.4:70279290-70279309 | MS.gene004176:intron | 45.0% | |
| CATCTGCTAGGTAACAAACC+AGG | + | chr2.4:70278246-70278265 | MS.gene004176:intron | 45.0% | |
| CTACGAGTATGCTCTTCTCT+AGG | - | chr2.4:70278588-70278607 | None:intergenic | 45.0% | |
| CTAGCCATGACAGAAGAAGT+AGG | - | chr2.4:70282050-70282069 | None:intergenic | 45.0% | |
| CTAGGTAACAAACCAGGAAG+AGG | + | chr2.4:70278252-70278271 | MS.gene004176:intron | 45.0% | |
| GAAAGCTGTAACAGTGTCTG+AGG | + | chr2.4:70277899-70277918 | MS.gene004176:CDS | 45.0% | |
| GAACACTGTCTTCTCTTGCA+AGG | - | chr2.4:70282002-70282021 | None:intergenic | 45.0% | |
| GAACTCCTTACGTGTGACTA+AGG | - | chr2.4:70279569-70279588 | None:intergenic | 45.0% | |
| GAAGCCCCGATACTTCAAAA+TGG | + | chr2.4:70278654-70278673 | MS.gene004176:intron | 45.0% | |
| GAATTGCTGGAAACAGTCAG+AGG | - | chr2.4:70281365-70281384 | None:intergenic | 45.0% | |
| GATACTCTCCGGATACGTAT+CGG | - | chr2.4:70278732-70278751 | None:intergenic | 45.0% | |
| GATACTTCCCGATACGTATC+CGG | + | chr2.4:70278721-70278740 | MS.gene004176:intron | 45.0% | |
| GATTCAAGAACCAAGCAACC+AGG | - | chr2.4:70278131-70278150 | None:intergenic | 45.0% | |
| GCAGCAATCGTACGAAGATT+TGG | - | chr2.4:70281035-70281054 | None:intergenic | 45.0% | |
| GCAGTATCGTATCTCGTATC+CGG | + | chr2.4:70279289-70279308 | MS.gene004176:intron | 45.0% | |
| GCCAAGCCATTAAACTCATC+AGG | - | chr2.4:70279831-70279850 | None:intergenic | 45.0% | |
| GGCCATACAGAAGGAAAATC+AGG | - | chr2.4:70281439-70281458 | None:intergenic | 45.0% | |
| GGTGCCAACAATTTCTGTGT+TGG | - | chr2.4:70278546-70278565 | None:intergenic | 45.0% | |
| GTCCAAGGATCGATTAATCC+AGG | + | chr2.4:70278452-70278471 | MS.gene004176:intron | 45.0% | |
| GTCTGATACCAAGACTTCGA+CGG | - | chr2.4:70279034-70279053 | None:intergenic | 45.0% | |
| GTCTTGGTATCAGACGACTT+TGG | + | chr2.4:70279039-70279058 | MS.gene004176:intron | 45.0% | |
| GTTTGGTTGGACAAGTAGAG+TGG | - | chr2.4:70281195-70281214 | None:intergenic | 45.0% | |
| TAAGATTGCCATGGAAGGCA+AGG | - | chr2.4:70281120-70281139 | None:intergenic | 45.0% | |
| TAGCTCCCACACCAGAATTA+TGG | + | chr2.4:70278027-70278046 | MS.gene004176:CDS | 45.0% | |
| TATAAGCTGGACCACTCGTA+AGG | - | chr2.4:70280926-70280945 | None:intergenic | 45.0% | |
| TCCCGCACTAGATTCTTCAA+TGG | + | chr2.4:70280633-70280652 | MS.gene004176:intron | 45.0% | |
| TCCCTGGATTAATCGATCCT+TGG | - | chr2.4:70278457-70278476 | None:intergenic | 45.0% | |
| TCGCAGTTCTGTTAGTTGGA+TGG | + | chr2.4:70280710-70280729 | MS.gene004176:intron | 45.0% | |
| TCTCAAACAAAAGGGGACTG+TGG | - | chr2.4:70280973-70280992 | None:intergenic | 45.0% | |
| TGTGGAGTTAGGGACATTCA+GGG | + | chr2.4:70279795-70279814 | MS.gene004176:CDS | 45.0% | |
| TTGGGCTCTCTAACTCTTAG+CGG | - | chr2.4:70281765-70281784 | None:intergenic | 45.0% | |
| TTGTGGAGTTAGGGACATTC+AGG | + | chr2.4:70279794-70279813 | MS.gene004176:CDS | 45.0% | |
| TTGTTTGTGTGGTGTGGTGT+CGG | - | chr2.4:70278938-70278957 | None:intergenic | 45.0% | |
| TTTGATGGAGAGGATGCGTT+TGG | - | chr2.4:70281212-70281231 | None:intergenic | 45.0% | |
| ! | CCTGCTTCACAGGTACTTTT+AGG | + | chr2.4:70279988-70280007 | MS.gene004176:intron | 45.0% |
| ! | CTAGAGAAGAGCATACTCGT+AGG | + | chr2.4:70278586-70278605 | MS.gene004176:intron | 45.0% |
| ! | CTTGAATCTGGAACTGGTAG+TGG | + | chr2.4:70278143-70278162 | MS.gene004176:CDS | 45.0% |
| ! | GGATACGTATCGGGAAGTAT+CGG | - | chr2.4:70278722-70278741 | None:intergenic | 45.0% |
| ! | GGTTGCTTGGTTCTTGAATC+TGG | + | chr2.4:70278131-70278150 | MS.gene004176:CDS | 45.0% |
| ! | TAGCGGCTTGAATTTTCTCG+TGG | + | chr2.4:70281138-70281157 | MS.gene004176:intron | 45.0% |
| ! | TTTTGGATCTGCCTCAACCT+TGG | + | chr2.4:70279862-70279881 | MS.gene004176:CDS | 45.0% |
| !! | CAAGGGTTCTGAAGTATGGA+CGG | + | chr2.4:70281008-70281027 | MS.gene004176:intron | 45.0% |
| !! | CCTAAAAGTACCTGTGAAGC+AGG | - | chr2.4:70279991-70280010 | None:intergenic | 45.0% |
| !! | GATACGTATCGGGAAGTATC+GGG | - | chr2.4:70278721-70278740 | None:intergenic | 45.0% |
| !! | GTCCCCTTTTGTTTGAGACT+TGG | + | chr2.4:70280975-70280994 | MS.gene004176:intron | 45.0% |
| !!! | CGGGGGATATCTGGTTTTTT+TGG | - | chr2.4:70281784-70281803 | None:intergenic | 45.0% |
| AACAAAGGGCAGCATCTGCT+AGG | + | chr2.4:70278234-70278253 | MS.gene004176:CDS | 50.0% | |
| AGACCTTGTGATGAGGCTAG+AGG | + | chr2.4:70282068-70282087 | MS.gene004176:CDS | 50.0% | |
| AGTTAGGGACATTCAGGGTG+AGG | + | chr2.4:70279800-70279819 | MS.gene004176:CDS | 50.0% | |
| ATGGAGAGGATGCGTTTGGT+TGG | - | chr2.4:70281208-70281227 | None:intergenic | 50.0% | |
| CAAACAAAAGGGGACTGTGG+AGG | - | chr2.4:70280970-70280989 | None:intergenic | 50.0% | |
| CAACTAACAGAACTGCGACG+TGG | - | chr2.4:70280708-70280727 | None:intergenic | 50.0% | |
| CAATTGGGTCCGACTACTAG+CGG | - | chr2.4:70278493-70278512 | None:intergenic | 50.0% | |
| CACGTCGCAGTTCTGTTAGT+TGG | + | chr2.4:70280706-70280725 | MS.gene004176:intron | 50.0% | |
| CAGATGCTGCCCTTTGTTCA+TGG | - | chr2.4:70278232-70278251 | None:intergenic | 50.0% | |
| CATGGCTAGACCTTGTGATG+AGG | + | chr2.4:70282061-70282080 | MS.gene004176:CDS | 50.0% | |
| CTACACGGTGTAGTCAACAG+TGG | - | chr2.4:70279379-70279398 | None:intergenic | 50.0% | |
| GCCTTCCATGGCAATCTTAG+CGG | + | chr2.4:70281121-70281140 | MS.gene004176:intron | 50.0% | |
| GCTGAAGGAATGGCTAACCA+AGG | - | chr2.4:70279882-70279901 | None:intergenic | 50.0% | |
| GGAATGGCTAACCAAGGTTG+AGG | - | chr2.4:70279876-70279895 | None:intergenic | 50.0% | |
| GGAGATTGTTCCTGGTTGCT+TGG | + | chr2.4:70278118-70278137 | MS.gene004176:CDS | 50.0% | |
| GGAGTTGCGACAACTTCTAG+AGG | - | chr2.4:70281418-70281437 | None:intergenic | 50.0% | |
| GGGACTGAAGGATGTAATGG+AGG | - | chr2.4:70280868-70280887 | None:intergenic | 50.0% | |
| GTTAGGGACATTCAGGGTGA+GGG | + | chr2.4:70279801-70279820 | MS.gene004176:CDS | 50.0% | |
| TCAAGCCGCTAAGATTGCCA+TGG | - | chr2.4:70281129-70281148 | None:intergenic | 50.0% | |
| TGACCTCTAGCCTCATCACA+AGG | - | chr2.4:70282074-70282093 | None:intergenic | 50.0% | |
| TGATACCAAGACTTCGACGG+TGG | - | chr2.4:70279031-70279050 | None:intergenic | 50.0% | |
| TGGGCATAGTCCATCATCTC+TGG | + | chr2.4:70280810-70280829 | MS.gene004176:intron | 50.0% | |
| TGGGCTCTCTAACTCTTAGC+GGG | - | chr2.4:70281764-70281783 | None:intergenic | 50.0% | |
| ! | ACTGCACCGATACGCTGATA+CGG | - | chr2.4:70279274-70279293 | None:intergenic | 50.0% |
| AAAGTGGACGGCGACCACTT+TGG | - | chr2.4:70279006-70279025 | None:intergenic | 55.0% | |
| AAAGTGGTCGCCGTCCACTT+TGG | + | chr2.4:70279005-70279024 | MS.gene004176:intron | 55.0% | |
| AAGCCAACTCCTAGGGCCAT+GGG | + | chr2.4:70278627-70278646 | MS.gene004176:intron | 55.0% | |
| ACACCACCAAGCCAACTCCT+AGG | + | chr2.4:70278619-70278638 | MS.gene004176:intron | 55.0% | |
| ATCTCGTATCCGGGCTTCAC+AGG | + | chr2.4:70279299-70279318 | MS.gene004176:intron | 55.0% | |
| CACCACCAAGCCAACTCCTA+GGG | + | chr2.4:70278620-70278639 | MS.gene004176:intron | 55.0% | |
| CCGATACGTCCCGATACACA+CGG | + | chr2.4:70278788-70278807 | MS.gene004176:intron | 55.0% | |
| CCGTGTGTATCGGGACGTAT+CGG | - | chr2.4:70278791-70278810 | None:intergenic | 55.0% | |
| CTACGCTGTAGCGTAACCCA+TGG | - | chr2.4:70279325-70279344 | None:intergenic | 55.0% | |
| GATGAGGCTAGAGGTCACAC+AGG | + | chr2.4:70282077-70282096 | MS.gene004176:CDS | 55.0% | |
| GCACTTCAGTCCTGCTTCAC+AGG | + | chr2.4:70279978-70279997 | MS.gene004176:CDS | 55.0% | |
| GCCGCTAAGATTGCCATGGA+AGG | - | chr2.4:70281125-70281144 | None:intergenic | 55.0% | |
| GCTGGAAACAGTCAGAGGCA+TGG | - | chr2.4:70281360-70281379 | None:intergenic | 55.0% | |
| GGTCTCAGTTTCGAATCCCC+AGG | - | chr2.4:70278567-70278586 | None:intergenic | 55.0% | |
| TATCGGTGCAGGATACGCAG+GGG | - | chr2.4:70278694-70278713 | None:intergenic | 55.0% | |
| TCTCGTTCAGCCCTTACGAG+TGG | + | chr2.4:70280912-70280931 | MS.gene004176:intron | 55.0% | |
| TGCAGGATACGCAGGGGATA+CGG | - | chr2.4:70278688-70278707 | None:intergenic | 55.0% | |
| TGGAAGGCAAGGCCCTTACA+AGG | - | chr2.4:70281109-70281128 | None:intergenic | 55.0% | |
| TGTAAGGGCCTTGCCTTCCA+TGG | + | chr2.4:70281109-70281128 | MS.gene004176:intron | 55.0% | |
| TTTGGCCACCGTCGAAGTCT+TGG | + | chr2.4:70279023-70279042 | MS.gene004176:intron | 55.0% | |
| ! | AGATGGCAAGAGCGTACGAG+AGG | - | chr2.4:70281285-70281304 | None:intergenic | 55.0% |
| ! | CTGCACCGATACGCTGATAC+GGG | - | chr2.4:70279273-70279292 | None:intergenic | 55.0% |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | chr2.4:70278695-70278714 | None:intergenic | 55.0% |
| !! | AGGAGTTGGCTTGGTGGTGT+AGG | - | chr2.4:70278619-70278638 | None:intergenic | 55.0% |
| !! | GGGAAGTATCGGGCAGGTAT+CGG | - | chr2.4:70278711-70278730 | None:intergenic | 55.0% |
| AACCCATGGCCTGTGAAGCC+CGG | - | chr2.4:70279311-70279330 | None:intergenic | 60.0% | |
| ATCCGGGCTTCACAGGCCAT+GGG | + | chr2.4:70279306-70279325 | MS.gene004176:intron | 60.0% | |
| CAAGCCAACTCCTAGGGCCA+TGG | + | chr2.4:70278626-70278645 | MS.gene004176:intron | 60.0% | |
| CATGGCCCTAGGAGTTGGCT+TGG | - | chr2.4:70278628-70278647 | None:intergenic | 60.0% | |
| GACTTCGACGGTGGCCAAAG+TGG | - | chr2.4:70279022-70279041 | None:intergenic | 60.0% | |
| GCTAGGGCAGTTGCGCCAAA+CGG | + | chr2.4:70278185-70278204 | MS.gene004176:CDS | 60.0% | |
| TATCCGGGCTTCACAGGCCA+TGG | + | chr2.4:70279305-70279324 | MS.gene004176:intron | 60.0% | |
| TATCGGGGCTTCACAGCCCA+TGG | - | chr2.4:70278646-70278665 | None:intergenic | 60.0% | |
| TCCCACCGTCCGCTAGTAGT+CGG | + | chr2.4:70278481-70278500 | MS.gene004176:intron | 60.0% | |
| TCGACGGTGGCCAAAGTGGA+CGG | - | chr2.4:70279018-70279037 | None:intergenic | 60.0% | |
| TGGGTCCGACTACTAGCGGA+CGG | - | chr2.4:70278489-70278508 | None:intergenic | 60.0% | |
| ! | CTACTAGCGGACGGTGGGAT+TGG | - | chr2.4:70278480-70278499 | None:intergenic | 60.0% |
| ! | TCCGACTACTAGCGGACGGT+GGG | - | chr2.4:70278485-70278504 | None:intergenic | 60.0% |
| !! | CGTATCGGGAAGTATCGGGC+AGG | - | chr2.4:70278717-70278736 | None:intergenic | 60.0% |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | chr2.4:70278696-70278715 | None:intergenic | 60.0% |
| !! | TATCGGGCAGGTATCGGTGC+AGG | - | chr2.4:70278705-70278724 | None:intergenic | 60.0% |
| !! | TGGTGTGGTGTCGGTCGTAC+TGG | - | chr2.4:70278929-70278948 | None:intergenic | 60.0% |
| CAGCCCATGGCCCTAGGAGT+TGG | - | chr2.4:70278633-70278652 | None:intergenic | 65.0% | |
| GCTTCACAGCCCATGGCCCT+AGG | - | chr2.4:70278639-70278658 | None:intergenic | 65.0% | |
| ! | GTCCGACTACTAGCGGACGG+TGG | - | chr2.4:70278486-70278505 | None:intergenic | 65.0% |
| !! | GGCCCTAGGAGTTGGCTTGG+TGG | - | chr2.4:70278625-70278644 | None:intergenic | 65.0% |
| !! | CGGACGGTGGGATTGGTCCC+TGG | - | chr2.4:70278473-70278492 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 70277807 | 70282136 | 70277807 | ID=MS.gene004176 |
| chr2.4 | mRNA | 70277807 | 70282136 | 70277807 | ID=MS.gene004176.t1;Parent=MS.gene004176 |
| chr2.4 | exon | 70277807 | 70278255 | 70277807 | ID=MS.gene004176.t1.exon1;Parent=MS.gene004176.t1 |
| chr2.4 | CDS | 70277807 | 70278255 | 70277807 | ID=cds.MS.gene004176.t1;Parent=MS.gene004176.t1 |
| chr2.4 | exon | 70279755 | 70279999 | 70279755 | ID=MS.gene004176.t1.exon2;Parent=MS.gene004176.t1 |
| chr2.4 | CDS | 70279755 | 70279999 | 70279755 | ID=cds.MS.gene004176.t1;Parent=MS.gene004176.t1 |
| chr2.4 | exon | 70281910 | 70282136 | 70281910 | ID=MS.gene004176.t1.exon3;Parent=MS.gene004176.t1 |
| chr2.4 | CDS | 70281910 | 70282136 | 70281910 | ID=cds.MS.gene004176.t1;Parent=MS.gene004176.t1 |
| Gene Sequence |
| Protein sequence |
