Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30096.t1 | XP_003589467.1 | 89.3 | 457 | 49 | 0 | 1 | 457 | 1 | 457 | 7.30E-228 | 799.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30096.t1 | Q54UB1 | 32.0 | 444 | 266 | 5 | 14 | 454 | 37 | 447 | 4.8e-55 | 216.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30096.t1 | G7I755 | 89.3 | 457 | 49 | 0 | 1 | 457 | 1 | 457 | 5.2e-228 | 799.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30096 | MS.gene066758 | PPI |
| MS.gene047362 | MS.gene30096 | PPI |
| MS.gene004176 | MS.gene30096 | PPI |
| MS.gene002506 | MS.gene30096 | PPI |
| MS.gene30096 | MS.gene054180 | PPI |
| MS.gene30096 | MS.gene99758 | PPI |
| MS.gene054179 | MS.gene30096 | PPI |
| MS.gene01479 | MS.gene30096 | PPI |
| MS.gene30096 | MS.gene30726 | PPI |
| MS.gene30096 | MS.gene059414 | PPI |
| MS.gene77102 | MS.gene30096 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30096.t1 | MTR_1g024920 | 96.061 | 457 | 18 | 0 | 1 | 457 | 1 | 457 | 0.0 | 914 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30096.t1 | AT2G45730 | 61.641 | 451 | 144 | 5 | 10 | 457 | 22 | 446 | 0.0 | 514 |
Find 101 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTATCCATTGAAAAT+TGG | 0.166239 | 3.2:+42397323 | MS.gene30096:CDS |
| ATGGTTGGTGGCCTTCTTAC+TGG | 0.198600 | 3.2:+42397920 | MS.gene30096:CDS |
| CAATGGATACTTCTTGAAAT+AGG | 0.217844 | 3.2:-42397315 | None:intergenic |
| TCCAGCCTTTATAGCTTTGC+AGG | 0.222527 | 3.2:-42399167 | None:intergenic |
| ATTGACTCGTGGAAGGAAAA+TGG | 0.227278 | 3.2:+42399211 | MS.gene30096:CDS |
| CGTATCAAATGTTGCGCTAT+TGG | 0.240963 | 3.2:-42396320 | None:intergenic |
| ACCAGTGAGTTGACCGTCTT+TGG | 0.244796 | 3.2:-42395900 | None:intergenic |
| ATCTCTCATTCGTCAGAAAA+TGG | 0.252753 | 3.2:+42399079 | MS.gene30096:CDS |
| AAGTGCAATTTACATTTAAT+TGG | 0.266218 | 3.2:-42398952 | None:intergenic |
| TTTGTATGCAATTCATATCT+TGG | 0.278999 | 3.2:+42398197 | MS.gene30096:CDS |
| CAATCTACAGCTTGAGAAAA+TGG | 0.282349 | 3.2:+42399897 | MS.gene30096:CDS |
| GAAAATGGAATTTCTGATCT+TGG | 0.300851 | 3.2:+42399094 | MS.gene30096:CDS |
| TATCTTCACCAGTGAGGCTT+TGG | 0.305154 | 3.2:-42395964 | None:intergenic |
| ACACTGCCGTCATCATGTTT+TGG | 0.317670 | 3.2:-42398923 | None:intergenic |
| CGTTAGCCATTGAAAGTAGA+AGG | 0.321154 | 3.2:-42397865 | None:intergenic |
| TGACATTCTCGTTGTTGATA+TGG | 0.336210 | 3.2:+42397901 | MS.gene30096:CDS |
| AAGAGCCTGCAAAGCTATAA+AGG | 0.342065 | 3.2:+42399162 | MS.gene30096:CDS |
| CTAATACCTTTGGGTTGAAA+TGG | 0.345383 | 3.2:-42394777 | None:intergenic |
| GCATGCAAATGAGTGCATTT+GGG | 0.359567 | 3.2:+42400175 | MS.gene30096:CDS |
| AGAAGTATCCATTGAAAATT+GGG | 0.361508 | 3.2:+42397324 | MS.gene30096:CDS |
| TGCATGCAAATGAGTGCATT+TGG | 0.363049 | 3.2:+42400174 | MS.gene30096:CDS |
| AGTCTGGTGCAGCAATAATT+AGG | 0.382222 | 3.2:-42399327 | None:intergenic |
| CTGCACCAGACTTGGATACT+TGG | 0.382708 | 3.2:+42399338 | MS.gene30096:CDS |
| GGACGTCTCATAAGTACTTT+TGG | 0.387747 | 3.2:-42396785 | None:intergenic |
| ATCTTCACCAGTGAGGCTTT+GGG | 0.389493 | 3.2:-42395963 | None:intergenic |
| ATTGGTGATAAATAGCAAAT+GGG | 0.397185 | 3.2:-42399402 | None:intergenic |
| GGTGCTGTGGCAGAGCGTTT+AGG | 0.400582 | 3.2:+42397941 | MS.gene30096:CDS |
| TATTTATCACCAATATCTTC+AGG | 0.407320 | 3.2:+42399411 | MS.gene30096:CDS |
| AATTGCAGAAAATTGAAGAT+TGG | 0.413722 | 3.2:+42394660 | MS.gene30096:intron |
| TATTGGTGATAAATAGCAAA+TGG | 0.415287 | 3.2:-42399403 | None:intergenic |
| ATTGTCCCTTCTACTTTCAA+TGG | 0.417484 | 3.2:+42397859 | MS.gene30096:CDS |
| AAAGGTCACCTTCGAGCAAC+AGG | 0.421884 | 3.2:-42396806 | None:intergenic |
| CCACTGATTGGTTGTCCATT+CGG | 0.432694 | 3.2:+42394705 | MS.gene30096:CDS |
| GACCGTCTTTGGACTCGGCT+TGG | 0.436624 | 3.2:-42395889 | None:intergenic |
| TTATTTATTGCAGAATTGTA+AGG | 0.438615 | 3.2:+42398852 | MS.gene30096:intron |
| AGACTTGGATACTTGGACAT+TGG | 0.439819 | 3.2:+42399345 | MS.gene30096:CDS |
| TGCTCACTACAGCCACTGAT+TGG | 0.443123 | 3.2:+42394693 | MS.gene30096:CDS |
| AGCTATAAAGGCTGGAGAAA+AGG | 0.443779 | 3.2:+42399174 | MS.gene30096:CDS |
| GAGTTGACCGTCTTTGGACT+CGG | 0.444453 | 3.2:-42395894 | None:intergenic |
| TTGACTCGTGGAAGGAAAAT+GGG | 0.449843 | 3.2:+42399212 | MS.gene30096:CDS |
| GCCTGCAAAGCTATAAAGGC+TGG | 0.451952 | 3.2:+42399166 | MS.gene30096:CDS |
| TTGTGACAACAATTCAGAAA+TGG | 0.460444 | 3.2:-42398879 | None:intergenic |
| AATTATTGCTGCACCAGACT+TGG | 0.465888 | 3.2:+42399330 | MS.gene30096:CDS |
| CAACTCGACACTTCTTCTGA+TGG | 0.477651 | 3.2:+42394738 | MS.gene30096:CDS |
| TATATGCAGGCAGGGTGCTA+AGG | 0.479379 | 3.2:+42396270 | MS.gene30096:intron |
| GGGGAAGAGTTTGCTAAAAG+TGG | 0.485901 | 3.2:-42399382 | None:intergenic |
| CTGGTGAGTTGAGGGACAAC+CGG | 0.488388 | 3.2:+42395918 | MS.gene30096:CDS |
| CTCGTTGTTGATATGGTTGG+TGG | 0.492274 | 3.2:+42397908 | MS.gene30096:CDS |
| AATACTGCCCAAAGCCTCAC+TGG | 0.508455 | 3.2:+42395956 | MS.gene30096:CDS |
| CTGCCACAGCACCAGTAAGA+AGG | 0.510669 | 3.2:-42397931 | None:intergenic |
| AATGTCCAAGTATCCAAGTC+TGG | 0.512151 | 3.2:-42399343 | None:intergenic |
| GGTTGAAATGGAGATAGAAA+AGG | 0.517330 | 3.2:-42394765 | None:intergenic |
| CTCTGTTATTTGCAATCCAA+TGG | 0.519916 | 3.2:-42399920 | None:intergenic |
| TCAACTCACTGGTGAGTTGA+GGG | 0.521142 | 3.2:+42395910 | MS.gene30096:CDS |
| CTATCTCCATTTCAACCCAA+AGG | 0.529076 | 3.2:+42394771 | MS.gene30096:CDS |
| TCTTGGACAGGCACCATCCA+TGG | 0.531216 | 3.2:+42398214 | MS.gene30096:CDS |
| ATGCAATTCATATCTTGGAC+AGG | 0.532059 | 3.2:+42398202 | MS.gene30096:CDS |
| GCCTTGGCTACGTGAATACC+AGG | 0.532354 | 3.2:+42399942 | MS.gene30096:CDS |
| CAGCTTGAGAAAATGGCCAT+TGG | 0.533840 | 3.2:+42399904 | MS.gene30096:CDS |
| AATGCACTCATTTGCATGCA+CGG | 0.534233 | 3.2:-42400171 | None:intergenic |
| ATTCTCGTTGTTGATATGGT+TGG | 0.536995 | 3.2:+42397905 | MS.gene30096:CDS |
| AACACTGAAGAAATAAAAGA+TGG | 0.541792 | 3.2:+42395860 | MS.gene30096:CDS |
| ATATGCAGGCAGGGTGCTAA+GGG | 0.541866 | 3.2:+42396271 | MS.gene30096:intron |
| GATTGCAAATAACAGAGCCT+TGG | 0.542512 | 3.2:+42399926 | MS.gene30096:CDS |
| GCTTTGCAGGCTCTTAGAGC+AGG | 0.543207 | 3.2:-42399154 | None:intergenic |
| GTCAACTCACTGGTGAGTTG+AGG | 0.545293 | 3.2:+42395909 | MS.gene30096:CDS |
| TAAGCGACGAAATCTGCAAA+AGG | 0.546332 | 3.2:+42398258 | MS.gene30096:CDS |
| ACAATAAGAAAAGAGTTACA+TGG | 0.552508 | 3.2:+42394488 | MS.gene30096:CDS |
| AAATATCCTCACAATATCCA+TGG | 0.553785 | 3.2:-42398231 | None:intergenic |
| TCCAAAGACGGTCAACTCAC+TGG | 0.557860 | 3.2:+42395899 | MS.gene30096:CDS |
| ATGCACTCATTTGCATGCAC+GGG | 0.558786 | 3.2:-42400170 | None:intergenic |
| TACGAAAACGTCATTCTCAC+AGG | 0.570104 | 3.2:+42396339 | MS.gene30096:CDS |
| ATGCACGGGTGAGTTCTTGA+CGG | 0.572376 | 3.2:-42400156 | None:intergenic |
| CTCAAGAAATCATTGACTCG+TGG | 0.573979 | 3.2:+42399200 | MS.gene30096:CDS |
| AAGAAAAGAGTTACATGGGA+AGG | 0.576519 | 3.2:+42394493 | MS.gene30096:CDS |
| GGCTCTTAGAGCAGGAAATG+TGG | 0.580777 | 3.2:-42399146 | None:intergenic |
| AGAAATCATTGACTCGTGGA+AGG | 0.586169 | 3.2:+42399204 | MS.gene30096:CDS |
| TGGCCTTCTTACTGGTGCTG+TGG | 0.592640 | 3.2:+42397928 | MS.gene30096:CDS |
| CATGCAAATGAGTGCATTTG+GGG | 0.597684 | 3.2:+42400176 | MS.gene30096:CDS |
| TATTATTGTCGATCAACGAC+CGG | 0.599829 | 3.2:-42395937 | None:intergenic |
| AGTTTGCTAAAAGTGGTAAG+AGG | 0.599948 | 3.2:-42399375 | None:intergenic |
| TTGGTGATAAATAGCAAATG+GGG | 0.602700 | 3.2:-42399401 | None:intergenic |
| ATCCTCACAATATCCATGGA+TGG | 0.603371 | 3.2:-42398227 | None:intergenic |
| ACCTGGTATTCACGTAGCCA+AGG | 0.606267 | 3.2:-42399943 | None:intergenic |
| TTGTGCATGCACGTTGCTAG+AGG | 0.610249 | 3.2:-42399877 | None:intergenic |
| CTAATTCAGATTCTTGCGTG+TGG | 0.610376 | 3.2:+42397832 | MS.gene30096:intron |
| CAATAAGAAAAGAGTTACAT+GGG | 0.610785 | 3.2:+42394489 | MS.gene30096:CDS |
| TTCCAAGCCGAGTCCAAAGA+CGG | 0.617977 | 3.2:+42395887 | MS.gene30096:CDS |
| AATATGTGCATCAGTCAGCA+TGG | 0.624090 | 3.2:+42399051 | MS.gene30096:CDS |
| CAAAATCCAAAACATGATGA+CGG | 0.624523 | 3.2:+42398917 | MS.gene30096:CDS |
| CACCATCCATGGATATTGTG+AGG | 0.625248 | 3.2:+42398225 | MS.gene30096:CDS |
| AAGATATAGAAGACATGCGA+AGG | 0.637003 | 3.2:+42395981 | MS.gene30096:CDS |
| GTTAGCCATTGAAAGTAGAA+GGG | 0.644218 | 3.2:-42397864 | None:intergenic |
| TGAGACGTCCTGTTGCTCGA+AGG | 0.645575 | 3.2:+42396798 | MS.gene30096:CDS |
| CTTCTATATCTTCACCAGTG+AGG | 0.664706 | 3.2:-42395970 | None:intergenic |
| GTCTTGCTTGATATCAACGA+TGG | 0.678428 | 3.2:+42394523 | MS.gene30096:CDS |
| AAAACATGATGACGGCAGTG+TGG | 0.681492 | 3.2:+42398925 | MS.gene30096:CDS |
| GCTGTGGCAGAGCGTTTAGG+AGG | 0.683534 | 3.2:+42397944 | MS.gene30096:CDS |
| CCGAATGGACAACCAATCAG+TGG | 0.686765 | 3.2:-42394705 | None:intergenic |
| ATGTGCATCAGTCAGCATGG+AGG | 0.746880 | 3.2:+42399054 | MS.gene30096:CDS |
| ATGCAAATGAGTGCATTTGG+GGG | 0.754346 | 3.2:+42400177 | MS.gene30096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATATTTTATATGTCTT+TGG | + | chr3.2:42396967-42396986 | MS.gene30096:intron | 10.0% |
| !! | AAAAAAAAATTCAAACCAAA+AGG | - | chr3.2:42397133-42397152 | None:intergenic | 15.0% |
| !! | ATAAATAAAGAAGAAAATTG+AGG | - | chr3.2:42394602-42394621 | None:intergenic | 15.0% |
| !! | CAATAATAACAGAAAAATAA+AGG | - | chr3.2:42396827-42396846 | None:intergenic | 15.0% |
| !! | GATATAAATTTAAACTTAGT+TGG | + | chr3.2:42397970-42397989 | MS.gene30096:intron | 15.0% |
| !! | TAAAGATGTATTTATATATC+TGG | - | chr3.2:42396133-42396152 | None:intergenic | 15.0% |
| !! | TAATCATATATTTCTTATTC+AGG | + | chr3.2:42400128-42400147 | MS.gene30096:intron | 15.0% |
| !! | TATAATTTCTTTCTATGTTT+GGG | + | chr3.2:42396218-42396237 | MS.gene30096:intron | 15.0% |
| !! | TGAATAGTGATTTATTATAA+AGG | + | chr3.2:42399462-42399481 | MS.gene30096:intron | 15.0% |
| !! | TGTTATTATAATTACCTAAA+TGG | - | chr3.2:42395844-42395863 | None:intergenic | 15.0% |
| !! | TTAAAAGTTAGATTGAAATA+TGG | + | chr3.2:42395109-42395128 | MS.gene30096:intron | 15.0% |
| !! | TTATAATTTCTTTCTATGTT+TGG | + | chr3.2:42396217-42396236 | MS.gene30096:intron | 15.0% |
| !!! | AAAATTATTGATTACATCAT+AGG | - | chr3.2:42398715-42398734 | None:intergenic | 15.0% |
| !!! | AGTTTACCATTTATTTTTTT+GGG | + | chr3.2:42398302-42398321 | MS.gene30096:intron | 15.0% |
| !!! | ATTCTTGATTTTTGTTTTTT+GGG | + | chr3.2:42397609-42397628 | MS.gene30096:intron | 15.0% |
| !!! | ATTTTGCTACTTTTTTAATA+TGG | + | chr3.2:42398001-42398020 | MS.gene30096:intron | 15.0% |
| !!! | GAAAAATAAAAGCTTTAAAA+AGG | - | chr3.2:42398407-42398426 | None:intergenic | 15.0% |
| !!! | TATTCTTGATTTTTGTTTTT+TGG | + | chr3.2:42397608-42397627 | MS.gene30096:intron | 15.0% |
| !!! | TATTTACAAAAGTACATAAA+GGG | + | chr3.2:42400017-42400036 | MS.gene30096:intron | 15.0% |
| !!! | TGAGTATTTCTTTTATAATT+TGG | + | chr3.2:42399300-42399319 | MS.gene30096:intron | 15.0% |
| !!! | TTATGTACTTTTGTAAATAA+AGG | - | chr3.2:42400016-42400035 | None:intergenic | 15.0% |
| !!! | TTATTTACAAAAGTACATAA+AGG | + | chr3.2:42400016-42400035 | MS.gene30096:intron | 15.0% |
| !!! | TTTTAACCCAAAAAAATAAA+TGG | - | chr3.2:42398311-42398330 | None:intergenic | 15.0% |
| !! | AAGTGCAATTTACATTTAAT+TGG | - | chr3.2:42398955-42398974 | None:intergenic | 20.0% |
| !! | AATCAAATATGTACATGATA+TGG | + | chr3.2:42396933-42396952 | MS.gene30096:intron | 20.0% |
| !! | ATTGAAAATATTATCATGCA+CGG | - | chr3.2:42399491-42399510 | None:intergenic | 20.0% |
| !! | CAAAATTCTTATACATTTCA+AGG | - | chr3.2:42397509-42397528 | None:intergenic | 20.0% |
| !! | GAATCAAAAGAAATGTTTAT+AGG | + | chr3.2:42398557-42398576 | MS.gene30096:intron | 20.0% |
| !! | GATTGAAATATGGTATATTA+TGG | + | chr3.2:42395119-42395138 | MS.gene30096:intron | 20.0% |
| !! | GCTGATTATATTATCAATTT+GGG | + | chr3.2:42399741-42399760 | MS.gene30096:intron | 20.0% |
| !! | TAAATAACTATGACTCTATT+TGG | - | chr3.2:42395406-42395425 | None:intergenic | 20.0% |
| !! | TAGATATATCTTAGAACTTT+GGG | - | chr3.2:42395331-42395350 | None:intergenic | 20.0% |
| !! | TATTATAATTACCTAAATGG+TGG | - | chr3.2:42395841-42395860 | None:intergenic | 20.0% |
| !! | TCTATAACTTTGATATAGAT+GGG | + | chr3.2:42396107-42396126 | MS.gene30096:intron | 20.0% |
| !! | TGGCTATTATATTATTGAAT+TGG | + | chr3.2:42397756-42397775 | MS.gene30096:intron | 20.0% |
| !! | TTAGATATATCTTAGAACTT+TGG | - | chr3.2:42395332-42395351 | None:intergenic | 20.0% |
| !! | TTATTTATTGCAGAATTGTA+AGG | + | chr3.2:42398852-42398871 | MS.gene30096:intron | 20.0% |
| !! | TTCTATAACTTTGATATAGA+TGG | + | chr3.2:42396106-42396125 | MS.gene30096:intron | 20.0% |
| !! | TTGTTTGTTTGCTTTATAAA+CGG | + | chr3.2:42399851-42399870 | MS.gene30096:intron | 20.0% |
| !! | TTTATAGGTTTCTTTCTTAT+GGG | + | chr3.2:42398572-42398591 | MS.gene30096:intron | 20.0% |
| !!! | ATGTACATATTTGATTTTCA+AGG | - | chr3.2:42396929-42396948 | None:intergenic | 20.0% |
| !!! | CAACTTTTTTTTTTTGAAGA+TGG | - | chr3.2:42398686-42398705 | None:intergenic | 20.0% |
| !!! | CAGTTTACCATTTATTTTTT+TGG | + | chr3.2:42398301-42398320 | MS.gene30096:intron | 20.0% |
| !!! | GTTTTCTTTTGTTTCTTTTA+AGG | + | chr3.2:42399517-42399536 | MS.gene30096:intron | 20.0% |
| !!! | TGCTGATTATATTATCAATT+TGG | + | chr3.2:42399740-42399759 | MS.gene30096:intron | 20.0% |
| !!! | TTAGTTTTACAATCTAAAGT+TGG | + | chr3.2:42398156-42398175 | MS.gene30096:intron | 20.0% |
| !!! | TTCTTGATTTTTGTTTTTTG+GGG | + | chr3.2:42397610-42397629 | MS.gene30096:intron | 20.0% |
| !!! | TTTTATAATATACATAGCTC+AGG | + | chr3.2:42398535-42398554 | MS.gene30096:intron | 20.0% |
| ! | AACACTGAAGAAATAAAAGA+TGG | + | chr3.2:42395860-42395879 | MS.gene30096:CDS | 25.0% |
| ! | AATTGCAGAAAATTGAAGAT+TGG | + | chr3.2:42394660-42394679 | MS.gene30096:intron | 25.0% |
| ! | ACAATAAGAAAAGAGTTACA+TGG | + | chr3.2:42394488-42394507 | MS.gene30096:CDS | 25.0% |
| ! | ACAATCTCTAAACAAATTTG+AGG | + | chr3.2:42397106-42397125 | MS.gene30096:intron | 25.0% |
| ! | AGATATTGTAACACAAAAAG+AGG | - | chr3.2:42397204-42397223 | None:intergenic | 25.0% |
| ! | ATAACAGAAGTAAATGCATA+TGG | - | chr3.2:42397362-42397381 | None:intergenic | 25.0% |
| ! | ATACCTACTAATTCAACATA+TGG | - | chr3.2:42398602-42398621 | None:intergenic | 25.0% |
| ! | ATGCTGTTAAAAACTAACAA+TGG | - | chr3.2:42395576-42395595 | None:intergenic | 25.0% |
| ! | ATGTTGAATTAGTAGGTATT+AGG | + | chr3.2:42398603-42398622 | MS.gene30096:intron | 25.0% |
| ! | CAAAAATTACCTGAAGATAT+TGG | - | chr3.2:42399423-42399442 | None:intergenic | 25.0% |
| ! | CAATAAGAAAAGAGTTACAT+GGG | + | chr3.2:42394489-42394508 | MS.gene30096:CDS | 25.0% |
| ! | CAATCTCTAAACAAATTTGA+GGG | + | chr3.2:42397107-42397126 | MS.gene30096:intron | 25.0% |
| ! | CTATACTATTCTATATATGC+AGG | + | chr3.2:42396257-42396276 | MS.gene30096:intron | 25.0% |
| ! | CTGAATTCGTTATTAATATC+TGG | + | chr3.2:42397637-42397656 | MS.gene30096:intron | 25.0% |
| ! | GATAAAGAGAGTAAACAATT+TGG | - | chr3.2:42396694-42396713 | None:intergenic | 25.0% |
| ! | GTTTATAGGTTTCTTTCTTA+TGG | + | chr3.2:42398571-42398590 | MS.gene30096:intron | 25.0% |
| ! | TAAAAACTAACAATGGCAAA+TGG | - | chr3.2:42395569-42395588 | None:intergenic | 25.0% |
| ! | TATATTGAACTAGTTGCTAA+GGG | - | chr3.2:42395653-42395672 | None:intergenic | 25.0% |
| ! | TATTTATCACCAATATCTTC+AGG | + | chr3.2:42399411-42399430 | MS.gene30096:CDS | 25.0% |
| ! | TGTTTGATCCCTTAAAAATT+TGG | - | chr3.2:42399615-42399634 | None:intergenic | 25.0% |
| ! | TGTTTGATCTCTTACAAATT+TGG | - | chr3.2:42399663-42399682 | None:intergenic | 25.0% |
| ! | TTACTTCAACTTCTTTACAA+GGG | + | chr3.2:42396587-42396606 | MS.gene30096:intron | 25.0% |
| ! | TTATATTGAACTAGTTGCTA+AGG | - | chr3.2:42395654-42395673 | None:intergenic | 25.0% |
| ! | TTTACTTCAACTTCTTTACA+AGG | + | chr3.2:42396586-42396605 | MS.gene30096:intron | 25.0% |
| ! | TTTGTATGCAATTCATATCT+TGG | + | chr3.2:42398197-42398216 | MS.gene30096:CDS | 25.0% |
| !! | AAAATTTTCAAAGCTTCCTT+TGG | + | chr3.2:42399772-42399791 | MS.gene30096:intron | 25.0% |
| !! | ATTGGTGATAAATAGCAAAT+GGG | - | chr3.2:42399405-42399424 | None:intergenic | 25.0% |
| !! | CAATATCTTCAGGTAATTTT+TGG | + | chr3.2:42399421-42399440 | MS.gene30096:intron | 25.0% |
| !! | GAATAGTGCCAAATTTTTAA+GGG | + | chr3.2:42399604-42399623 | MS.gene30096:intron | 25.0% |
| !! | TATTGGTGATAAATAGCAAA+TGG | - | chr3.2:42399406-42399425 | None:intergenic | 25.0% |
| !! | TGAATAGTGCCAAATTTTTA+AGG | + | chr3.2:42399603-42399622 | MS.gene30096:intron | 25.0% |
| !! | TTATATTTGAGCCATTCTTT+TGG | + | chr3.2:42397378-42397397 | MS.gene30096:intron | 25.0% |
| !! | TTTAGAGTGAAGATGTAATT+TGG | + | chr3.2:42396411-42396430 | MS.gene30096:intron | 25.0% |
| !!! | AAGAAGTATCCATTGAAAAT+TGG | + | chr3.2:42397323-42397342 | MS.gene30096:CDS | 25.0% |
| !!! | AGAAGTATCCATTGAAAATT+GGG | + | chr3.2:42397324-42397343 | MS.gene30096:CDS | 25.0% |
| !!! | ATGTTCAACTTGTTTTCATA+AGG | + | chr3.2:42395035-42395054 | MS.gene30096:intron | 25.0% |
| !!! | CATATAAGCTGTTTTCATAA+GGG | - | chr3.2:42395071-42395090 | None:intergenic | 25.0% |
| !!! | GATACACATGCTTTAAAAAT+TGG | + | chr3.2:42397533-42397552 | MS.gene30096:intron | 25.0% |
| !!! | GTTGTTTTTGATAAAGTTTG+TGG | - | chr3.2:42397587-42397606 | None:intergenic | 25.0% |
| !!! | GTTTTTAACAGCATTTTTTG+TGG | + | chr3.2:42395582-42395601 | MS.gene30096:intron | 25.0% |
| !!! | TAGTTTTGAACACTTTGTAT+TGG | + | chr3.2:42398432-42398451 | MS.gene30096:intron | 25.0% |
| !!! | TCATATAAGCTGTTTTCATA+AGG | - | chr3.2:42395072-42395091 | None:intergenic | 25.0% |
| !!! | TTTTTTGGGTTAAAATCATG+CGG | + | chr3.2:42398316-42398335 | MS.gene30096:intron | 25.0% |
| AAATATCCTCACAATATCCA+TGG | - | chr3.2:42398234-42398253 | None:intergenic | 30.0% | |
| AATAAACCAATCCAAACAGA+CGG | - | chr3.2:42394927-42394946 | None:intergenic | 30.0% | |
| ACTTATCATTATAAGCGCTT+GGG | + | chr3.2:42395354-42395373 | MS.gene30096:intron | 30.0% | |
| AGACAAGTTGTATAAAGAAC+TGG | - | chr3.2:42398777-42398796 | None:intergenic | 30.0% | |
| ATAGTCTGAAAAATGTGAAG+AGG | + | chr3.2:42397721-42397740 | MS.gene30096:intron | 30.0% | |
| ATATTGAACTAGTTGCTAAG+GGG | - | chr3.2:42395652-42395671 | None:intergenic | 30.0% | |
| ATCCATATGTATACTTAGAG+AGG | + | chr3.2:42399707-42399726 | MS.gene30096:intron | 30.0% | |
| CAAAATCCAAAACATGATGA+CGG | + | chr3.2:42398917-42398936 | MS.gene30096:CDS | 30.0% | |
| CAATGGATACTTCTTGAAAT+AGG | - | chr3.2:42397318-42397337 | None:intergenic | 30.0% | |
| CCTGAACAAAAGTTTATAAG+CGG | + | chr3.2:42395256-42395275 | MS.gene30096:intron | 30.0% | |
| CTAACTTTGGTTAGAACTTT+AGG | + | chr3.2:42399560-42399579 | MS.gene30096:intron | 30.0% | |
| CTGAACAAAAGTTTATAAGC+GGG | + | chr3.2:42395257-42395276 | MS.gene30096:intron | 30.0% | |
| GAAAATGGAATTTCTGATCT+TGG | + | chr3.2:42399094-42399113 | MS.gene30096:CDS | 30.0% | |
| GACAAAAATAGCTAAATACC+TGG | - | chr3.2:42399963-42399982 | None:intergenic | 30.0% | |
| GACGATACCAAATAATTGAA+GGG | + | chr3.2:42396616-42396635 | MS.gene30096:intron | 30.0% | |
| GGGATCAAACATATAAAAGA+TGG | + | chr3.2:42399624-42399643 | MS.gene30096:intron | 30.0% | |
| GTAAGTATGCAACATATTGA+AGG | - | chr3.2:42394898-42394917 | None:intergenic | 30.0% | |
| GTTAGTTAGAAACCAATTCA+AGG | - | chr3.2:42397807-42397826 | None:intergenic | 30.0% | |
| GTTTATTGTTCTGCTAACTT+TGG | + | chr3.2:42399547-42399566 | MS.gene30096:intron | 30.0% | |
| TAGCCATATGTTGAATTAGT+AGG | + | chr3.2:42398596-42398615 | MS.gene30096:intron | 30.0% | |
| TATATCTTAGAACTTTGGGT+TGG | - | chr3.2:42395327-42395346 | None:intergenic | 30.0% | |
| TGAAACTGATTAGAAGATGA+AGG | - | chr3.2:42398978-42398997 | None:intergenic | 30.0% | |
| TGAACAAAAGTTTATAAGCG+GGG | + | chr3.2:42395258-42395277 | MS.gene30096:intron | 30.0% | |
| TGACGATACCAAATAATTGA+AGG | + | chr3.2:42396615-42396634 | MS.gene30096:intron | 30.0% | |
| TTCCATTCTTAACAAGCTTT+GGG | + | chr3.2:42398082-42398101 | MS.gene30096:intron | 30.0% | |
| TTGTGACAACAATTCAGAAA+TGG | - | chr3.2:42398882-42398901 | None:intergenic | 30.0% | |
| TTTCCATTCTTAACAAGCTT+TGG | + | chr3.2:42398081-42398100 | MS.gene30096:intron | 30.0% | |
| ! | AAAAGCAGTAGCATCTTTTA+TGG | + | chr3.2:42396667-42396686 | MS.gene30096:intron | 30.0% |
| ! | ACATCTTACCCAATTTTCAA+TGG | - | chr3.2:42397335-42397354 | None:intergenic | 30.0% |
| ! | ATATCTTAGAACTTTGGGTT+GGG | - | chr3.2:42395326-42395345 | None:intergenic | 30.0% |
| ! | ATGGATGCTTCAATTTTGTA+TGG | - | chr3.2:42398667-42398686 | None:intergenic | 30.0% |
| ! | CTGTTTTCATAAGGGATTTT+GGG | - | chr3.2:42395063-42395082 | None:intergenic | 30.0% |
| ! | CTTCAATTTTGTATGGTGAT+TGG | - | chr3.2:42398660-42398679 | None:intergenic | 30.0% |
| ! | CTTTGTTATACATCCATTTG+AGG | + | chr3.2:42395699-42395718 | MS.gene30096:intron | 30.0% |
| ! | GAACAGAAGCATAATCTATT+TGG | - | chr3.2:42399807-42399826 | None:intergenic | 30.0% |
| ! | TTGGTGATAAATAGCAAATG+GGG | - | chr3.2:42399404-42399423 | None:intergenic | 30.0% |
| !! | ATTAGCATTGACACATATAC+CGG | + | chr3.2:42394795-42394814 | MS.gene30096:intron | 30.0% |
| !! | ATTCTTTTTCATCAAGTCTC+AGG | - | chr3.2:42396052-42396071 | None:intergenic | 30.0% |
| !! | GGTCAAAACTTGTTAGAAAT+TGG | + | chr3.2:42395603-42395622 | MS.gene30096:intron | 30.0% |
| !!! | ATCTAAAGTTGGTGTTTTAC+AGG | + | chr3.2:42398167-42398186 | MS.gene30096:intron | 30.0% |
| !!! | GAAGTTTTGTTTCTTTTGTC+TGG | + | chr3.2:42398812-42398831 | MS.gene30096:intron | 30.0% |
| !!! | TGTTTTTTGCAGTATATGTG+AGG | + | chr3.2:42397292-42397311 | MS.gene30096:intron | 30.0% |
| AACGCAAGAAAAAGTGAACT+CGG | - | chr3.2:42397674-42397693 | None:intergenic | 35.0% | |
| AAGAAAAGAGTTACATGGGA+AGG | + | chr3.2:42394493-42394512 | MS.gene30096:CDS | 35.0% | |
| AAGATATAGAAGACATGCGA+AGG | + | chr3.2:42395981-42396000 | MS.gene30096:CDS | 35.0% | |
| ACACACGTATTTGTGTACTT+TGG | + | chr3.2:42396083-42396102 | MS.gene30096:intron | 35.0% | |
| ACATCCATTTGAGGAATATG+AGG | + | chr3.2:42395708-42395727 | MS.gene30096:intron | 35.0% | |
| ACATCTTTAATGTCCGTATG+TGG | + | chr3.2:42397435-42397454 | MS.gene30096:intron | 35.0% | |
| ACTATTCTATATATGCAGGC+AGG | + | chr3.2:42396261-42396280 | MS.gene30096:intron | 35.0% | |
| AGAGGAACAAAGTGAAATCA+AGG | - | chr3.2:42397186-42397205 | None:intergenic | 35.0% | |
| ATATTTCTCCTGCACAGATA+TGG | - | chr3.2:42396738-42396757 | None:intergenic | 35.0% | |
| ATCAGAGATTTGCACAGAAT+TGG | - | chr3.2:42400101-42400120 | None:intergenic | 35.0% | |
| ATCCAATGTAAGGCTCTTAA+CGG | - | chr3.2:42395227-42395246 | None:intergenic | 35.0% | |
| ATCTCTCATTCGTCAGAAAA+TGG | + | chr3.2:42399079-42399098 | MS.gene30096:CDS | 35.0% | |
| ATGCAATTCATATCTTGGAC+AGG | + | chr3.2:42398202-42398221 | MS.gene30096:CDS | 35.0% | |
| ATTCTCGTTGTTGATATGGT+TGG | + | chr3.2:42397905-42397924 | MS.gene30096:CDS | 35.0% | |
| ATTGTCCCTTCTACTTTCAA+TGG | + | chr3.2:42397859-42397878 | MS.gene30096:CDS | 35.0% | |
| CAATCTACAGCTTGAGAAAA+TGG | + | chr3.2:42399897-42399916 | MS.gene30096:CDS | 35.0% | |
| CACTTATCATTATAAGCGCT+TGG | + | chr3.2:42395353-42395372 | MS.gene30096:intron | 35.0% | |
| CATCCATTTGAGGAATATGA+GGG | + | chr3.2:42395709-42395728 | MS.gene30096:intron | 35.0% | |
| CCTTACAAAACCAGTTTGTA+AGG | - | chr3.2:42395294-42395313 | None:intergenic | 35.0% | |
| CTATTCTATATATGCAGGCA+GGG | + | chr3.2:42396262-42396281 | MS.gene30096:intron | 35.0% | |
| CTGTGGATATATCCTTGAAT+TGG | + | chr3.2:42397792-42397811 | MS.gene30096:intron | 35.0% | |
| GAGGAACAAAGTGAAATCAA+GGG | - | chr3.2:42397185-42397204 | None:intergenic | 35.0% | |
| GATAACCATAAGTCATTGAG+TGG | - | chr3.2:42397266-42397285 | None:intergenic | 35.0% | |
| GGTTGAAATGGAGATAGAAA+AGG | - | chr3.2:42394768-42394787 | None:intergenic | 35.0% | |
| GTAGTCACCCTTCAATTATT+TGG | - | chr3.2:42396626-42396645 | None:intergenic | 35.0% | |
| GTATAAGCTATTCCTATAGC+AGG | - | chr3.2:42395205-42395224 | None:intergenic | 35.0% | |
| GTGTCAATGCTAATACCTTT+GGG | - | chr3.2:42394789-42394808 | None:intergenic | 35.0% | |
| GTTAGCCATTGAAAGTAGAA+GGG | - | chr3.2:42397867-42397886 | None:intergenic | 35.0% | |
| TACATCATGCTCCAAAAGAA+TGG | - | chr3.2:42397392-42397411 | None:intergenic | 35.0% | |
| TATTATTGTCGATCAACGAC+CGG | - | chr3.2:42395940-42395959 | None:intergenic | 35.0% | |
| TCTTGTAGAATAGTGCCAAA+AGG | - | chr3.2:42397059-42397078 | None:intergenic | 35.0% | |
| TGACATTCTCGTTGTTGATA+TGG | + | chr3.2:42397901-42397920 | MS.gene30096:CDS | 35.0% | |
| TGCCTCTCTAAGTATACATA+TGG | - | chr3.2:42399712-42399731 | None:intergenic | 35.0% | |
| TGTATCCACTCAATGACTTA+TGG | + | chr3.2:42397258-42397277 | MS.gene30096:intron | 35.0% | |
| TGTGTCAATGCTAATACCTT+TGG | - | chr3.2:42394790-42394809 | None:intergenic | 35.0% | |
| TGTTACAGAAAAGCAAGATG+TGG | - | chr3.2:42396187-42396206 | None:intergenic | 35.0% | |
| TTAATGTCCGTATGTGGTTT+AGG | + | chr3.2:42397441-42397460 | MS.gene30096:intron | 35.0% | |
| ! | AAACAAATTTGAGGGCCTTT+TGG | + | chr3.2:42397115-42397134 | MS.gene30096:intron | 35.0% |
| ! | AGGTTATCTGCGATTGATTT+CGG | + | chr3.2:42395736-42395755 | MS.gene30096:intron | 35.0% |
| ! | AGTTGAAAAACAGTACCGAA+TGG | - | chr3.2:42394723-42394742 | None:intergenic | 35.0% |
| ! | CCGCTTATAAACTTTTGTTC+AGG | - | chr3.2:42395259-42395278 | None:intergenic | 35.0% |
| ! | CTCTGTTATTTGCAATCCAA+TGG | - | chr3.2:42399923-42399942 | None:intergenic | 35.0% |
| ! | CTGATTTGTATAGACAGAAG+AGG | - | chr3.2:42396467-42396486 | None:intergenic | 35.0% |
| ! | TGCATCTAGAGCTATTCATT+TGG | - | chr3.2:42398500-42398519 | None:intergenic | 35.0% |
| ! | TTGAACACTTTGTATTGGCA+TGG | + | chr3.2:42398437-42398456 | MS.gene30096:intron | 35.0% |
| ! | TTGTTGTTGTATCCTGCTAT+AGG | + | chr3.2:42395190-42395209 | MS.gene30096:intron | 35.0% |
| !! | AGTTTGCTAAAAGTGGTAAG+AGG | - | chr3.2:42399378-42399397 | None:intergenic | 35.0% |
| !! | CTAATACCTTTGGGTTGAAA+TGG | - | chr3.2:42394780-42394799 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGGGATTT+TGG | - | chr3.2:42395064-42395083 | None:intergenic | 35.0% |
| !! | GGTATAGTGATTGATAGTGT+TGG | + | chr3.2:42398103-42398122 | MS.gene30096:intron | 35.0% |
| !! | TACCCAAAGCTTGTTAAGAA+TGG | - | chr3.2:42398087-42398106 | None:intergenic | 35.0% |
| !! | TATATGTCTTTGGAGCATCT+GGG | + | chr3.2:42396977-42396996 | MS.gene30096:intron | 35.0% |
| !! | TTATATGTCTTTGGAGCATC+TGG | + | chr3.2:42396976-42396995 | MS.gene30096:intron | 35.0% |
| !!! | CCTTACAAACTGGTTTTGTA+AGG | + | chr3.2:42395291-42395310 | MS.gene30096:intron | 35.0% |
| !!! | CTGGTTTTGTAAGGTTAGTT+AGG | + | chr3.2:42395300-42395319 | MS.gene30096:intron | 35.0% |
| !!! | GTTCACTTTTTCTTGCGTTT+TGG | + | chr3.2:42397675-42397694 | MS.gene30096:intron | 35.0% |
| !!! | TGAGGACATCTTGTTTTGTT+TGG | + | chr3.2:42396004-42396023 | MS.gene30096:intron | 35.0% |
| AAGAGCCTGCAAAGCTATAA+AGG | + | chr3.2:42399162-42399181 | MS.gene30096:CDS | 40.0% | |
| AATATGTGCATCAGTCAGCA+TGG | + | chr3.2:42399051-42399070 | MS.gene30096:CDS | 40.0% | |
| AATGCACTCATTTGCATGCA+CGG | - | chr3.2:42400174-42400193 | None:intergenic | 40.0% | |
| AATGTCCAAGTATCCAAGTC+TGG | - | chr3.2:42399346-42399365 | None:intergenic | 40.0% | |
| AATTATTGCTGCACCAGACT+TGG | + | chr3.2:42399330-42399349 | MS.gene30096:CDS | 40.0% | |
| ACAGTCTTCACCTTACAAAC+TGG | + | chr3.2:42395281-42395300 | MS.gene30096:intron | 40.0% | |
| AGACTTGGATACTTGGACAT+TGG | + | chr3.2:42399345-42399364 | MS.gene30096:CDS | 40.0% | |
| AGCTATAAAGGCTGGAGAAA+AGG | + | chr3.2:42399174-42399193 | MS.gene30096:CDS | 40.0% | |
| AGTCTGGTGCAGCAATAATT+AGG | - | chr3.2:42399330-42399349 | None:intergenic | 40.0% | |
| ATCCTCACAATATCCATGGA+TGG | - | chr3.2:42398230-42398249 | None:intergenic | 40.0% | |
| ATGCAAATGAGTGCATTTGG+GGG | + | chr3.2:42400177-42400196 | MS.gene30096:CDS | 40.0% | |
| CAATCCAAACAGACGGTATA+TGG | - | chr3.2:42394920-42394939 | None:intergenic | 40.0% | |
| CATATACCGTCTGTTTGGAT+TGG | + | chr3.2:42394918-42394937 | MS.gene30096:intron | 40.0% | |
| CATGCAAATGAGTGCATTTG+GGG | + | chr3.2:42400176-42400195 | MS.gene30096:CDS | 40.0% | |
| CATTTGAGGAATATGAGGGA+GGG | + | chr3.2:42395713-42395732 | MS.gene30096:intron | 40.0% | |
| CGTATCAAATGTTGCGCTAT+TGG | - | chr3.2:42396323-42396342 | None:intergenic | 40.0% | |
| CGTTAGCCATTGAAAGTAGA+AGG | - | chr3.2:42397868-42397887 | None:intergenic | 40.0% | |
| CTAATTCAGATTCTTGCGTG+TGG | + | chr3.2:42397832-42397851 | MS.gene30096:intron | 40.0% | |
| CTATCTCCATTTCAACCCAA+AGG | + | chr3.2:42394771-42394790 | MS.gene30096:CDS | 40.0% | |
| CTTACCATATACCGTCTGTT+TGG | + | chr3.2:42394913-42394932 | MS.gene30096:intron | 40.0% | |
| CTTCTATATCTTCACCAGTG+AGG | - | chr3.2:42395973-42395992 | None:intergenic | 40.0% | |
| GAGAGTAAAAACGAAGAGTG+CGG | - | chr3.2:42395791-42395810 | None:intergenic | 40.0% | |
| GATTGCAAATAACAGAGCCT+TGG | + | chr3.2:42399926-42399945 | MS.gene30096:CDS | 40.0% | |
| GCATGCAAATGAGTGCATTT+GGG | + | chr3.2:42400175-42400194 | MS.gene30096:CDS | 40.0% | |
| GCCTTACATTGGATGAGATA+AGG | + | chr3.2:42395233-42395252 | MS.gene30096:intron | 40.0% | |
| GCCTTATCTCATCCAATGTA+AGG | - | chr3.2:42395237-42395256 | None:intergenic | 40.0% | |
| GTCTTGCTTGATATCAACGA+TGG | + | chr3.2:42394523-42394542 | MS.gene30096:CDS | 40.0% | |
| TAAAGATGCCACACATCTAC+AGG | - | chr3.2:42397702-42397721 | None:intergenic | 40.0% | |
| TAAGCGACGAAATCTGCAAA+AGG | + | chr3.2:42398258-42398277 | MS.gene30096:CDS | 40.0% | |
| TACATCTCGATCCACCATTT+AGG | + | chr3.2:42395827-42395846 | MS.gene30096:intron | 40.0% | |
| TACCGTTAAGAGCCTTACAT+TGG | + | chr3.2:42395222-42395241 | MS.gene30096:intron | 40.0% | |
| TACGAAAACGTCATTCTCAC+AGG | + | chr3.2:42396339-42396358 | MS.gene30096:CDS | 40.0% | |
| TATTTGGCATTCAGTGCCAA+AGG | - | chr3.2:42399791-42399810 | None:intergenic | 40.0% | |
| TCTCTGACCTAAACCACATA+CGG | - | chr3.2:42397451-42397470 | None:intergenic | 40.0% | |
| TGCATGCAAATGAGTGCATT+TGG | + | chr3.2:42400174-42400193 | MS.gene30096:CDS | 40.0% | |
| TTTCTCTTTCAGTGCATCAG+TGG | - | chr3.2:42398377-42398396 | None:intergenic | 40.0% | |
| ! | AAGGGGTTATCGTCTTATTG+TGG | - | chr3.2:42395635-42395654 | None:intergenic | 40.0% |
| ! | AGAGTAAAAACGAAGAGTGC+GGG | - | chr3.2:42395790-42395809 | None:intergenic | 40.0% |
| ! | GATTGATTTCGGCTTCTTTG+TGG | + | chr3.2:42395747-42395766 | MS.gene30096:intron | 40.0% |
| ! | GGACGTCTCATAAGTACTTT+TGG | - | chr3.2:42396788-42396807 | None:intergenic | 40.0% |
| ! | TCTGGGTTTTGCTCTGATAA+TGG | + | chr3.2:42396994-42397013 | MS.gene30096:intron | 40.0% |
| ! | TTGACTCGTGGAAGGAAAAT+GGG | + | chr3.2:42399212-42399231 | MS.gene30096:CDS | 40.0% |
| ! | TTGGAGTATCATTCTCTCTG+TGG | + | chr3.2:42397775-42397794 | MS.gene30096:intron | 40.0% |
| !! | AGAAATCATTGACTCGTGGA+AGG | + | chr3.2:42399204-42399223 | MS.gene30096:CDS | 40.0% |
| !! | ATTGACTCGTGGAAGGAAAA+TGG | + | chr3.2:42399211-42399230 | MS.gene30096:CDS | 40.0% |
| !! | CTCAAGAAATCATTGACTCG+TGG | + | chr3.2:42399200-42399219 | MS.gene30096:CDS | 40.0% |
| !! | GGAAGGAAAATGGGTTTTCT+AGG | + | chr3.2:42399221-42399240 | MS.gene30096:CDS | 40.0% |
| !!! | GCTTTTATTTTGATCCCCGA+GGG | - | chr3.2:42396653-42396672 | None:intergenic | 40.0% |
| !!! | TGCTTTTATTTTGATCCCCG+AGG | - | chr3.2:42396654-42396673 | None:intergenic | 40.0% |
| ACTATCAGCAAATGCCGGAA+GGG | - | chr3.2:42396514-42396533 | None:intergenic | 45.0% | |
| ATAGAAGACATGCGAAGGTG+AGG | + | chr3.2:42395986-42396005 | MS.gene30096:intron | 45.0% | |
| ATCTTCACCAGTGAGGCTTT+GGG | - | chr3.2:42395966-42395985 | None:intergenic | 45.0% | |
| ATGCACTCATTTGCATGCAC+GGG | - | chr3.2:42400173-42400192 | None:intergenic | 45.0% | |
| CAACTCGACACTTCTTCTGA+TGG | + | chr3.2:42394738-42394757 | MS.gene30096:CDS | 45.0% | |
| CACCATCCATGGATATTGTG+AGG | + | chr3.2:42398225-42398244 | MS.gene30096:CDS | 45.0% | |
| CAGCTTGAGAAAATGGCCAT+TGG | + | chr3.2:42399904-42399923 | MS.gene30096:CDS | 45.0% | |
| CCATTTGAGGAATATGAGGG+AGG | + | chr3.2:42395712-42395731 | MS.gene30096:intron | 45.0% | |
| CCTCCCTCATATTCCTCAAA+TGG | - | chr3.2:42395715-42395734 | None:intergenic | 45.0% | |
| CTCGTTGTTGATATGGTTGG+TGG | + | chr3.2:42397908-42397927 | MS.gene30096:CDS | 45.0% | |
| CTGTTCACTCAGCATGTTGA+CGG | + | chr3.2:42399821-42399840 | MS.gene30096:intron | 45.0% | |
| GAAAAAGAAACTGACGCTGC+AGG | - | chr3.2:42394577-42394596 | None:intergenic | 45.0% | |
| GTTTGTGTCAGTGTCGTATC+CGG | - | chr3.2:42394817-42394836 | None:intergenic | 45.0% | |
| TACTCTCACTCTAACCTGCA+TGG | + | chr3.2:42395804-42395823 | MS.gene30096:intron | 45.0% | |
| TATCTTCACCAGTGAGGCTT+TGG | - | chr3.2:42395967-42395986 | None:intergenic | 45.0% | |
| TTGGGGGTTACATTCTCAGT+GGG | + | chr3.2:42400193-42400212 | MS.gene30096:CDS | 45.0% | |
| TTTGGGGGTTACATTCTCAG+TGG | + | chr3.2:42400192-42400211 | MS.gene30096:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3.2:42395168-42395187 | None:intergenic | 45.0% |
| ! | ACACTGCCGTCATCATGTTT+TGG | - | chr3.2:42398926-42398945 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3.2:42395169-42395188 | None:intergenic | 45.0% |
| ! | CCACTGATTGGTTGTCCATT+CGG | + | chr3.2:42394705-42394724 | MS.gene30096:CDS | 45.0% |
| ! | TCAACTCACTGGTGAGTTGA+GGG | + | chr3.2:42395910-42395929 | MS.gene30096:CDS | 45.0% |
| ! | TCCAGCCTTTATAGCTTTGC+AGG | - | chr3.2:42399170-42399189 | None:intergenic | 45.0% |
| !! | AAAACATGATGACGGCAGTG+TGG | + | chr3.2:42398925-42398944 | MS.gene30096:CDS | 45.0% |
| !! | AGTTGGTGTTTTACAGGCAC+TGG | + | chr3.2:42398173-42398192 | MS.gene30096:intron | 45.0% |
| !! | GGGGAAGAGTTTGCTAAAAG+TGG | - | chr3.2:42399385-42399404 | None:intergenic | 45.0% |
| !! | GTGGACTTGTTAGGAAGTCT+TGG | - | chr3.2:42396492-42396511 | None:intergenic | 45.0% |
| !! | GTTTTGGACCTGTAGATGTG+TGG | + | chr3.2:42397691-42397710 | MS.gene30096:intron | 45.0% |
| AAAGGTCACCTTCGAGCAAC+AGG | - | chr3.2:42396809-42396828 | None:intergenic | 50.0% | |
| AAGGGTGACTACTTCACCCT+CGG | + | chr3.2:42396634-42396653 | MS.gene30096:intron | 50.0% | |
| AATACTGCCCAAAGCCTCAC+TGG | + | chr3.2:42395956-42395975 | MS.gene30096:CDS | 50.0% | |
| ACCTGGTATTCACGTAGCCA+AGG | - | chr3.2:42399946-42399965 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr3.2:42395156-42395175 | None:intergenic | 50.0% | |
| ATGCACGGGTGAGTTCTTGA+CGG | - | chr3.2:42400159-42400178 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr3.2:42395155-42395174 | MS.gene30096:intron | 50.0% | |
| ATGTGCATCAGTCAGCATGG+AGG | + | chr3.2:42399054-42399073 | MS.gene30096:CDS | 50.0% | |
| CACTATCAGCAAATGCCGGA+AGG | - | chr3.2:42396515-42396534 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3.2:42395167-42395186 | MS.gene30096:intron | 50.0% | |
| CCGAATGGACAACCAATCAG+TGG | - | chr3.2:42394708-42394727 | None:intergenic | 50.0% | |
| CGCTCACTATCAGCAAATGC+CGG | - | chr3.2:42396519-42396538 | None:intergenic | 50.0% | |
| CTGCACCAGACTTGGATACT+TGG | + | chr3.2:42399338-42399357 | MS.gene30096:CDS | 50.0% | |
| GAAGCTCACCATATCTGTGC+AGG | + | chr3.2:42396727-42396746 | MS.gene30096:intron | 50.0% | |
| GAGTTGACCGTCTTTGGACT+CGG | - | chr3.2:42395897-42395916 | None:intergenic | 50.0% | |
| GCCTGCAAAGCTATAAAGGC+TGG | + | chr3.2:42399166-42399185 | MS.gene30096:CDS | 50.0% | |
| GGCTCTTAGAGCAGGAAATG+TGG | - | chr3.2:42399149-42399168 | None:intergenic | 50.0% | |
| GTCAACTCACTGGTGAGTTG+AGG | + | chr3.2:42395909-42395928 | MS.gene30096:CDS | 50.0% | |
| TCCAAAGACGGTCAACTCAC+TGG | + | chr3.2:42395899-42395918 | MS.gene30096:CDS | 50.0% | |
| TCCTAACAAGTCCACCCTTC+CGG | + | chr3.2:42396497-42396516 | MS.gene30096:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr3.2:42395162-42395181 | MS.gene30096:intron | 50.0% | |
| TGCTCACTACAGCCACTGAT+TGG | + | chr3.2:42394693-42394712 | MS.gene30096:CDS | 50.0% | |
| TGGATCGAGATGTACCATGC+AGG | - | chr3.2:42395821-42395840 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | + | chr3.2:42395156-42395175 | MS.gene30096:intron | 50.0% | |
| TTCCAAGCCGAGTCCAAAGA+CGG | + | chr3.2:42395887-42395906 | MS.gene30096:CDS | 50.0% | |
| TTGAGGAATATGAGGGAGGG+AGG | + | chr3.2:42395716-42395735 | MS.gene30096:intron | 50.0% | |
| TTGTGCATGCACGTTGCTAG+AGG | - | chr3.2:42399880-42399899 | None:intergenic | 50.0% | |
| ! | ACCAGTGAGTTGACCGTCTT+TGG | - | chr3.2:42395903-42395922 | None:intergenic | 50.0% |
| ! | ATATGCAGGCAGGGTGCTAA+GGG | + | chr3.2:42396271-42396290 | MS.gene30096:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3.2:42395170-42395189 | None:intergenic | 50.0% |
| ! | CTACGTGCTGTCATGCCTTT+TGG | + | chr3.2:42397041-42397060 | MS.gene30096:intron | 50.0% |
| ! | TATATGCAGGCAGGGTGCTA+AGG | + | chr3.2:42396270-42396289 | MS.gene30096:intron | 50.0% |
| ! | TGAAGAGGTGTGTGCATGTG+TGG | + | chr3.2:42397736-42397755 | MS.gene30096:intron | 50.0% |
| !! | ATGGTTGGTGGCCTTCTTAC+TGG | + | chr3.2:42397920-42397939 | MS.gene30096:CDS | 50.0% |
| AGGGTGACTACTTCACCCTC+GGG | + | chr3.2:42396635-42396654 | MS.gene30096:intron | 55.0% | |
| ATCAGCAAATGCCGGAAGGG+TGG | - | chr3.2:42396511-42396530 | None:intergenic | 55.0% | |
| CTGCCACAGCACCAGTAAGA+AGG | - | chr3.2:42397934-42397953 | None:intergenic | 55.0% | |
| GCCTTGGCTACGTGAATACC+AGG | + | chr3.2:42399942-42399961 | MS.gene30096:CDS | 55.0% | |
| GCTTTGCAGGCTCTTAGAGC+AGG | - | chr3.2:42399157-42399176 | None:intergenic | 55.0% | |
| TCTTGGACAGGCACCATCCA+TGG | + | chr3.2:42398214-42398233 | MS.gene30096:CDS | 55.0% | |
| TGAGACGTCCTGTTGCTCGA+AGG | + | chr3.2:42396798-42396817 | MS.gene30096:CDS | 55.0% | |
| ! | CTGGTGAGTTGAGGGACAAC+CGG | + | chr3.2:42395918-42395937 | MS.gene30096:CDS | 55.0% |
| ! | TGGCCTTCTTACTGGTGCTG+TGG | + | chr3.2:42397928-42397947 | MS.gene30096:CDS | 55.0% |
| GACCGTCTTTGGACTCGGCT+TGG | - | chr3.2:42395892-42395911 | None:intergenic | 60.0% | |
| GGGTGACTACTTCACCCTCG+GGG | + | chr3.2:42396636-42396655 | MS.gene30096:intron | 60.0% | |
| ! | GCCGGAAGGGTGGACTTGTT+AGG | - | chr3.2:42396501-42396520 | None:intergenic | 60.0% |
| ! | GCTGTGGCAGAGCGTTTAGG+AGG | + | chr3.2:42397944-42397963 | MS.gene30096:CDS | 60.0% |
| ! | GGTGCTGTGGCAGAGCGTTT+AGG | + | chr3.2:42397941-42397960 | MS.gene30096:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 42394472 | 42400236 | 42394472 | ID=MS.gene30096 |
| chr3.2 | mRNA | 42394472 | 42400236 | 42394472 | ID=MS.gene30096.t1;Parent=MS.gene30096 |
| chr3.2 | exon | 42394472 | 42394581 | 42394472 | ID=MS.gene30096.t1.exon1;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42394472 | 42394581 | 42394472 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42394668 | 42394792 | 42394668 | ID=MS.gene30096.t1.exon2;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42394668 | 42394792 | 42394668 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42395849 | 42396002 | 42395849 | ID=MS.gene30096.t1.exon3;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42395849 | 42396002 | 42395849 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42396279 | 42396360 | 42396279 | ID=MS.gene30096.t1.exon4;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42396279 | 42396360 | 42396279 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42396749 | 42396819 | 42396749 | ID=MS.gene30096.t1.exon5;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42396749 | 42396819 | 42396749 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42397304 | 42397345 | 42397304 | ID=MS.gene30096.t1.exon6;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42397304 | 42397345 | 42397304 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42397841 | 42397965 | 42397841 | ID=MS.gene30096.t1.exon7;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42397841 | 42397965 | 42397841 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42398189 | 42398279 | 42398189 | ID=MS.gene30096.t1.exon8;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42398189 | 42398279 | 42398189 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42398865 | 42398961 | 42398865 | ID=MS.gene30096.t1.exon9;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42398865 | 42398961 | 42398865 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42399046 | 42399242 | 42399046 | ID=MS.gene30096.t1.exon10;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42399046 | 42399242 | 42399046 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42399327 | 42399432 | 42399327 | ID=MS.gene30096.t1.exon11;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42399327 | 42399432 | 42399327 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42399877 | 42399963 | 42399877 | ID=MS.gene30096.t1.exon12;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42399877 | 42399963 | 42399877 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| chr3.2 | exon | 42400150 | 42400236 | 42400150 | ID=MS.gene30096.t1.exon13;Parent=MS.gene30096.t1 |
| chr3.2 | CDS | 42400150 | 42400236 | 42400150 | ID=cds.MS.gene30096.t1;Parent=MS.gene30096.t1 |
| Gene Sequence |
| Protein sequence |
