Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64008.t1 | XP_003589467.1 | 97.9 | 378 | 8 | 0 | 57 | 434 | 80 | 457 | 2.00E-203 | 718.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64008.t1 | Q54UB1 | 33.8 | 396 | 233 | 7 | 44 | 431 | 73 | 447 | 2.9e-49 | 197.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64008.t1 | G7I755 | 97.9 | 378 | 8 | 0 | 57 | 434 | 80 | 457 | 1.5e-203 | 718.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene054179 | MS.gene64008 | PPI |
MS.gene64008 | MS.gene059414 | PPI |
MS.gene64008 | MS.gene066758 | PPI |
MS.gene77102 | MS.gene64008 | PPI |
MS.gene047362 | MS.gene64008 | PPI |
MS.gene004176 | MS.gene64008 | PPI |
MS.gene64008 | MS.gene99758 | PPI |
MS.gene64008 | MS.gene054180 | PPI |
MS.gene64008 | MS.gene002506 | PPI |
MS.gene01479 | MS.gene64008 | PPI |
MS.gene64008 | MS.gene30726 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64008.t1 | MTR_1g024920 | 97.884 | 378 | 8 | 0 | 57 | 434 | 80 | 457 | 0.0 | 763 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64008.t1 | AT2G45730 | 61.198 | 384 | 128 | 4 | 61 | 434 | 74 | 446 | 1.82e-149 | 432 |
Find 94 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGAAGCATCCATTGAAAAT+TGG | 0.166239 | 1.4:+797739 | MS.gene64008:CDS |
ATGGTTGGTGGCCTTCTTAC+TGG | 0.198600 | 1.4:+799247 | MS.gene64008:CDS |
TCCAGCCTTTATAGCTTTGC+AGG | 0.222527 | 1.4:-800461 | None:intergenic |
ATTGACTCTTGGAAGGAAAA+TGG | 0.240508 | 1.4:+800505 | MS.gene64008:CDS |
CTTATCAAATGTTGCGCTAT+TGG | 0.243677 | 1.4:-796706 | None:intergenic |
ATCTCTCATTCGTCAGAAAA+TGG | 0.252753 | 1.4:+800373 | MS.gene64008:CDS |
AAGTGCAATTTACATTTAAT+TGG | 0.266218 | 1.4:-800252 | None:intergenic |
TTTGTATGCAATTCATATCT+TGG | 0.278999 | 1.4:+799553 | MS.gene64008:CDS |
CAATCTACAGCTTGAGAAAA+TGG | 0.282349 | 1.4:+801238 | MS.gene64008:CDS |
GAAAATGGAATTTCTGATCT+TGG | 0.300851 | 1.4:+800388 | MS.gene64008:CDS |
TATCTTCACCAGTGAGGCTT+TGG | 0.305154 | 1.4:-796341 | None:intergenic |
ACACTGCCGTCATCATGTTT+TGG | 0.317670 | 1.4:-800223 | None:intergenic |
CTTCAGACCGGAAGGATTCA+TGG | 0.334144 | 1.4:+794869 | MS.gene64008:CDS |
GGACGTCTTATAAGTACTTT+TGG | 0.334717 | 1.4:-797204 | None:intergenic |
TGACATTCTCGTTGTTGATA+TGG | 0.336210 | 1.4:+799228 | MS.gene64008:CDS |
AAGAGCCTGCAAAGCTATAA+AGG | 0.342065 | 1.4:+800456 | MS.gene64008:CDS |
CATTAGCCATTGAAAGTAGA+AGG | 0.344540 | 1.4:-799192 | None:intergenic |
TGCATGCAAATGAGTGCATT+TGG | 0.351990 | 1.4:+801521 | MS.gene64008:CDS |
CCAAAATTACCTGAAGATAT+TGG | 0.358571 | 1.4:-800720 | None:intergenic |
TCCATACTCCATGGCGTCTT+CGG | 0.367629 | 1.4:-794898 | None:intergenic |
GCATGCAAATGAGTGCATTT+GGG | 0.375049 | 1.4:+801522 | MS.gene64008:CDS |
AGAAGCATCCATTGAAAATT+GGG | 0.379799 | 1.4:+797740 | MS.gene64008:CDS |
AGTCTGGTGCAGCAATAATT+AGG | 0.382222 | 1.4:-800627 | None:intergenic |
CTGCACCAGACTTGGATACT+TGG | 0.382708 | 1.4:+800638 | MS.gene64008:CDS |
CTCAAGAAATCATTGACTCT+TGG | 0.389186 | 1.4:+800494 | MS.gene64008:CDS |
ATCTTCACCAGTGAGGCTTT+GGG | 0.389493 | 1.4:-796340 | None:intergenic |
AGGTTATCAGTGATTGATTA+CGG | 0.391156 | 1.4:+796104 | MS.gene64008:CDS |
GGTGCAGTGGCAGAGCGTTT+AGG | 0.395962 | 1.4:+799268 | MS.gene64008:CDS |
TATTTATCACCAATATCTTC+AGG | 0.407320 | 1.4:+800711 | MS.gene64008:CDS |
ATTGTCCCTTCTACTTTCAA+TGG | 0.417484 | 1.4:+799186 | MS.gene64008:CDS |
AAAGGTCACCTTCGAGCAAC+AGG | 0.421884 | 1.4:-797225 | None:intergenic |
TATTGGTGATAAATAGCAAA+TGG | 0.425158 | 1.4:-800703 | None:intergenic |
TTGTGACAACAAGTCAGAAA+TGG | 0.435540 | 1.4:-800179 | None:intergenic |
TTATTTATTGCAGAATTGTA+AGG | 0.438615 | 1.4:+800152 | MS.gene64008:intron |
ATTGGTGATAAATAGCAAAT+GGG | 0.443406 | 1.4:-800702 | None:intergenic |
GCCTGCAAAGCTATAAAGGC+TGG | 0.451952 | 1.4:+800460 | MS.gene64008:CDS |
TCAAAAGACAGTCAACTTAC+CGG | 0.453483 | 1.4:+796276 | MS.gene64008:CDS |
AATTATTGCTGCACCAGACT+TGG | 0.465888 | 1.4:+800630 | MS.gene64008:CDS |
ACATGCATTTGAGAAATATG+AGG | 0.473037 | 1.4:+796076 | MS.gene64008:CDS |
TATATGCAGGCAGGGTGCTA+AGG | 0.486648 | 1.4:+796656 | MS.gene64008:intron |
CTCGTTGTTGATATGGTTGG+TGG | 0.492274 | 1.4:+799235 | MS.gene64008:CDS |
CGCTAGAGTTTGCTTCAGAC+CGG | 0.496983 | 1.4:+794857 | MS.gene64008:CDS |
ATGCATGGGTGAGTTCTTGA+TGG | 0.501143 | 1.4:-801503 | None:intergenic |
TCAACTTACCGGTGAGTTGA+GGG | 0.503070 | 1.4:+796287 | MS.gene64008:CDS |
AATACTGCCCAAAGCCTCAC+TGG | 0.508455 | 1.4:+796333 | MS.gene64008:CDS |
CTGCCACTGCACCAGTAAGA+AGG | 0.508496 | 1.4:-799258 | None:intergenic |
CCGGTGAGTTGAGGGACAAC+CGG | 0.511377 | 1.4:+796295 | MS.gene64008:CDS |
AATGTCCAAGTATCCAAGTC+TGG | 0.512151 | 1.4:-800643 | None:intergenic |
TTGAGAAATATGAGGGAGGG+AGG | 0.513750 | 1.4:+796084 | MS.gene64008:CDS |
AATGCACTCATTTGCATGCA+TGG | 0.517471 | 1.4:-801518 | None:intergenic |
TAAGAAAACTTCATTCTCAC+AGG | 0.523266 | 1.4:+796725 | MS.gene64008:CDS |
GTCAACTTACCGGTGAGTTG+AGG | 0.524399 | 1.4:+796286 | MS.gene64008:CDS |
TCTTGGACAGGCACCATCCA+TGG | 0.531216 | 1.4:+799570 | MS.gene64008:CDS |
ATGCAATTCATATCTTGGAC+AGG | 0.532059 | 1.4:+799558 | MS.gene64008:CDS |
ATTCTCGTTGTTGATATGGT+TGG | 0.536995 | 1.4:+799232 | MS.gene64008:CDS |
CTCAGTTATTTGCAATCCGA+TGG | 0.541352 | 1.4:-801261 | None:intergenic |
AACACTGAAGACATAAAAGA+TGG | 0.541808 | 1.4:+796237 | MS.gene64008:CDS |
GCTTTGCAGGCTCTTAGAGC+AGG | 0.543207 | 1.4:-800448 | None:intergenic |
GGGGCAGAGTTTGATAAAAG+TGG | 0.553292 | 1.4:-800682 | None:intergenic |
AAATATCCTCACAATATCCA+TGG | 0.553785 | 1.4:-799587 | None:intergenic |
GATTGCAAATAACTGAGCCT+TGG | 0.554849 | 1.4:+801267 | MS.gene64008:CDS |
AGAAATCATTGACTCTTGGA+AGG | 0.556926 | 1.4:+800498 | MS.gene64008:CDS |
CATGCATTTGAGAAATATGA+GGG | 0.559584 | 1.4:+796077 | MS.gene64008:CDS |
ATATGCAGGCAGGGTGCTAA+GGG | 0.562125 | 1.4:+796657 | MS.gene64008:intron |
AGAGTTTGCTTCAGACCGGA+AGG | 0.573615 | 1.4:+794861 | MS.gene64008:CDS |
GGCTCTTAGAGCAGGAAATG+TGG | 0.580777 | 1.4:-800440 | None:intergenic |
CTCTAGCGAGTTTACTCGCG+AGG | 0.583793 | 1.4:-794842 | None:intergenic |
ACCTGGTATTCGCGTAGCCA+AGG | 0.585659 | 1.4:-801284 | None:intergenic |
CCGGTTGTCCCTCAACTCAC+CGG | 0.592179 | 1.4:-796295 | None:intergenic |
GCCTTGGCTACGCGAATACC+AGG | 0.594448 | 1.4:+801283 | MS.gene64008:CDS |
TGGCCTTCTTACTGGTGCAG+TGG | 0.596291 | 1.4:+799255 | MS.gene64008:CDS |
ATGCACTCATTTGCATGCAT+GGG | 0.597902 | 1.4:-801517 | None:intergenic |
TATTATTGTCGATCAACGAC+CGG | 0.599829 | 1.4:-796314 | None:intergenic |
ATCCTCACAATATCCATGGA+TGG | 0.603371 | 1.4:-799583 | None:intergenic |
CATGCAAATGAGTGCATTTG+GGG | 0.609044 | 1.4:+801523 | MS.gene64008:CDS |
ATTAGCCATTGAAAGTAGAA+GGG | 0.613664 | 1.4:-799191 | None:intergenic |
CTGATTCAGATTCTTGCGTG+TGG | 0.618711 | 1.4:+799159 | MS.gene64008:intron |
CATTTGAGAAATATGAGGGA+GGG | 0.622790 | 1.4:+796081 | MS.gene64008:CDS |
CAAAATCCAAAACATGATGA+CGG | 0.624523 | 1.4:+800217 | MS.gene64008:CDS |
CACCATCCATGGATATTGTG+AGG | 0.625248 | 1.4:+799581 | MS.gene64008:CDS |
AATGTGTGCATCAGTCAGCA+TGG | 0.631729 | 1.4:+800345 | MS.gene64008:CDS |
GCAGTGGCAGAGCGTTTAGG+AGG | 0.634206 | 1.4:+799271 | MS.gene64008:CDS |
CAGCTTGAGAAAATGGCCAT+CGG | 0.636892 | 1.4:+801245 | MS.gene64008:CDS |
AAGATATAGAAGACATGCGA+AGG | 0.637003 | 1.4:+796358 | MS.gene64008:CDS |
TAAGACGTCCTGTTGCTCGA+AGG | 0.647595 | 1.4:+797217 | MS.gene64008:CDS |
TTGGTGATAAATAGCAAATG+GGG | 0.648921 | 1.4:-800701 | None:intergenic |
TAAGCGACGAAATCTGCAAG+AGG | 0.655897 | 1.4:+799614 | MS.gene64008:CDS |
GCATTTGAGAAATATGAGGG+AGG | 0.660721 | 1.4:+796080 | MS.gene64008:CDS |
CTTCTATATCTTCACCAGTG+AGG | 0.664706 | 1.4:-796347 | None:intergenic |
AAAACATGATGACGGCAGTG+TGG | 0.681492 | 1.4:+800225 | MS.gene64008:CDS |
TTGTGCATGCAAGTTGCTAG+AGG | 0.695261 | 1.4:-801218 | None:intergenic |
AGTTTGATAAAAGTGGCAAG+AGG | 0.695485 | 1.4:-800675 | None:intergenic |
GTGTGCATCAGTCAGCATGG+AGG | 0.745962 | 1.4:+800348 | MS.gene64008:CDS |
ATGCAAATGAGTGCATTTGG+GGG | 0.767185 | 1.4:+801524 | MS.gene64008:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTAATA+TGG | + | chr1.4:799336-799355 | MS.gene64008:intron | 0.0% |
!! | CAATAATAACATAAAAATAA+AGG | - | chr1.4:797246-797265 | None:intergenic | 10.0% |
!! | TTCATAAAAGTAAATAAAAA+GGG | + | chr1.4:801366-801385 | MS.gene64008:intron | 10.0% |
!!! | ATAAATATTTTATTTGTCTT+TGG | + | chr1.4:797374-797393 | MS.gene64008:intron | 10.0% |
!!! | GAAAAAAAATTACAATTTTA+CGG | - | chr1.4:798211-798230 | None:intergenic | 10.0% |
!!! | TTTTAACTCAAAAAAATAAT+TGG | - | chr1.4:799667-799686 | None:intergenic | 10.0% |
!!! | TTTTTTTGTTTTTAAATAGA+AGG | - | chr1.4:798233-798252 | None:intergenic | 10.0% |
!! | GTTCATAAAAGTAAATAAAA+AGG | + | chr1.4:801365-801384 | MS.gene64008:intron | 15.0% |
!! | TAAAATGCTATATATATTCA+TGG | - | chr1.4:797833-797852 | None:intergenic | 15.0% |
!! | TTAAAATTCTTATACATTCA+AGG | - | chr1.4:797927-797946 | None:intergenic | 15.0% |
!!! | AAAATTTTCAATACTTCATT+TGG | + | chr1.4:801114-801133 | MS.gene64008:intron | 15.0% |
!!! | ATTCTTGAATTTTGTTTTTT+GGG | + | chr1.4:798935-798954 | MS.gene64008:intron | 15.0% |
!!! | CTTATTTGTTTTGAATTTTA+AGG | + | chr1.4:795291-795310 | MS.gene64008:intron | 15.0% |
!!! | TATTCTTGAATTTTGTTTTT+TGG | + | chr1.4:798934-798953 | MS.gene64008:intron | 15.0% |
!!! | TGTTAAACATTTTTTTTAAC+AGG | - | chr1.4:798607-798626 | None:intergenic | 15.0% |
!!! | TTATTTACTTTTATGAACAA+AGG | - | chr1.4:801363-801382 | None:intergenic | 15.0% |
!! | AAATGTTTATAGGTTTCTAT+CGG | + | chr1.4:799925-799944 | MS.gene64008:intron | 20.0% |
!! | AAATTCAAGAATAAGTTGTT+TGG | - | chr1.4:798927-798946 | None:intergenic | 20.0% |
!! | AAGTGCAATTTACATTTAAT+TGG | - | chr1.4:800255-800274 | None:intergenic | 20.0% |
!! | AATAAGTTGTTTATTCAAAC+AGG | + | chr1.4:795755-795774 | MS.gene64008:intron | 20.0% |
!! | AATCAAAGAGAAATGTTTAT+AGG | + | chr1.4:799915-799934 | MS.gene64008:intron | 20.0% |
!! | AATCAAATATGTAGATGATA+TGG | + | chr1.4:797340-797359 | MS.gene64008:intron | 20.0% |
!! | AATCTCTGATAACTATTTAA+TGG | + | chr1.4:801457-801476 | MS.gene64008:intron | 20.0% |
!! | AGGAAAGAAAGAATTAAAAT+AGG | + | chr1.4:798324-798343 | MS.gene64008:intron | 20.0% |
!! | ATAAGTTGTTTATTCAAACA+GGG | + | chr1.4:795756-795775 | MS.gene64008:intron | 20.0% |
!! | ATACCGTTAAAAACTAATAA+TGG | - | chr1.4:795950-795969 | None:intergenic | 20.0% |
!! | ATGTTTAACAAATTTGTATG+TGG | + | chr1.4:798617-798636 | MS.gene64008:intron | 20.0% |
!! | CGTCAATATTATGAAATTAT+TGG | + | chr1.4:801326-801345 | MS.gene64008:intron | 20.0% |
!! | GGGACATTATAATAAAAAAA+GGG | + | chr1.4:798353-798372 | MS.gene64008:intron | 20.0% |
!! | GGTAAAAGAATAGAAAAATA+TGG | + | chr1.4:795012-795031 | MS.gene64008:intron | 20.0% |
!! | GTAAAGTTTAAGTATACATA+TGG | - | chr1.4:801017-801036 | None:intergenic | 20.0% |
!! | TATGTAATTGAAGTTTAGTT+TGG | + | chr1.4:795147-795166 | MS.gene64008:intron | 20.0% |
!! | TGAATAGTGGTTTATTATAA+AGG | + | chr1.4:800761-800780 | MS.gene64008:intron | 20.0% |
!! | TGGCTATTATATTATTGAAT+TGG | + | chr1.4:799083-799102 | MS.gene64008:intron | 20.0% |
!! | TGGGACATTATAATAAAAAA+AGG | + | chr1.4:798352-798371 | MS.gene64008:intron | 20.0% |
!! | TGTAATAAATTGTGTCAAAT+TGG | + | chr1.4:795981-796000 | MS.gene64008:intron | 20.0% |
!! | TGTTATTAACATTACCTAAA+TGG | - | chr1.4:796221-796240 | None:intergenic | 20.0% |
!! | TGTTTAACAAATTTGTATGT+GGG | + | chr1.4:798618-798637 | MS.gene64008:intron | 20.0% |
!! | TGTTTGATCTCTTAAAAATT+TGG | - | chr1.4:800920-800939 | None:intergenic | 20.0% |
!! | TTATTTATTGCAGAATTGTA+AGG | + | chr1.4:800152-800171 | MS.gene64008:intron | 20.0% |
!! | TTCTATATGTTTGATATAGA+CGG | + | chr1.4:796486-796505 | MS.gene64008:intron | 20.0% |
!!! | AAGAATTAAAATAGGTTTTC+TGG | + | chr1.4:798332-798351 | MS.gene64008:intron | 20.0% |
!!! | AATGGTATATTTTATTTTGC+AGG | + | chr1.4:801475-801494 | MS.gene64008:intron | 20.0% |
!!! | AGAATTAAAATAGGTTTTCT+GGG | + | chr1.4:798333-798352 | MS.gene64008:intron | 20.0% |
!!! | AGAATTTTAAATTGATACAC+AGG | + | chr1.4:797937-797956 | MS.gene64008:intron | 20.0% |
!!! | ATCTACATATTTGATTTTCA+AGG | - | chr1.4:797336-797355 | None:intergenic | 20.0% |
!!! | CTTTTGTTTCTTTTATGTTA+AGG | + | chr1.4:800821-800840 | MS.gene64008:intron | 20.0% |
!!! | GAAAAATGAAAGCTTTAAAA+AGG | - | chr1.4:799764-799783 | None:intergenic | 20.0% |
!!! | TTACTTCAACTTTTTTACAA+TGG | + | chr1.4:796965-796984 | MS.gene64008:intron | 20.0% |
!!! | TTCATTTTTCAGAAATAGTT+TGG | + | chr1.4:799774-799793 | MS.gene64008:intron | 20.0% |
!!! | TTCTTGAATTTTGTTTTTTG+GGG | + | chr1.4:798936-798955 | MS.gene64008:intron | 20.0% |
!!! | TTGCCATTATTAGTTTTTAA+CGG | + | chr1.4:795944-795963 | MS.gene64008:intron | 20.0% |
! | AAAGATATTGTGACACAAAA+AGG | - | chr1.4:797617-797636 | None:intergenic | 25.0% |
! | AAGATATTGTGACACAAAAA+GGG | - | chr1.4:797616-797635 | None:intergenic | 25.0% |
! | AATGTTTATAGGTTTCTATC+GGG | + | chr1.4:799926-799945 | MS.gene64008:intron | 25.0% |
! | ACAATCTCTAAACAAATTTG+AGG | + | chr1.4:797505-797524 | MS.gene64008:intron | 25.0% |
! | AGAATAAGTTGTTTGGATAT+TGG | - | chr1.4:798920-798939 | None:intergenic | 25.0% |
! | AGTGTAAAACATTCCTTATA+AGG | + | chr1.4:796917-796936 | MS.gene64008:intron | 25.0% |
! | ATACACTATTCTACAAAAAG+AGG | + | chr1.4:797460-797479 | MS.gene64008:intron | 25.0% |
! | ATTAAGCAAAAAACAACACT+CGG | - | chr1.4:798547-798566 | None:intergenic | 25.0% |
! | ATTGAAAATATGATCATGCA+CGG | - | chr1.4:800790-800809 | None:intergenic | 25.0% |
! | CAATCTCTAAACAAATTTGA+GGG | + | chr1.4:797506-797525 | MS.gene64008:intron | 25.0% |
! | CTAACAGAAATAAATGCATA+TGG | - | chr1.4:797778-797797 | None:intergenic | 25.0% |
! | GATCAAAAGTTTATTGTTCT+GGG | + | chr1.4:800843-800862 | MS.gene64008:intron | 25.0% |
! | GTGTAAAACATTCCTTATAA+GGG | + | chr1.4:796918-796937 | MS.gene64008:intron | 25.0% |
! | GTTATAGCAATAGATAAAAG+AGG | - | chr1.4:795101-795120 | None:intergenic | 25.0% |
! | GTTTAACAAATTTGTATGTG+GGG | + | chr1.4:798619-798638 | MS.gene64008:intron | 25.0% |
! | TAAATGCCACCTTAAAAAAA+TGG | + | chr1.4:798853-798872 | MS.gene64008:intron | 25.0% |
! | TATAGTCTGAAAAATGTGAA+GGG | + | chr1.4:799047-799066 | MS.gene64008:intron | 25.0% |
! | TATTTATCACCAATATCTTC+AGG | + | chr1.4:800711-800730 | MS.gene64008:CDS | 25.0% |
! | TCTATATGTTTGATATAGAC+GGG | + | chr1.4:796487-796506 | MS.gene64008:intron | 25.0% |
! | TGAAACTGTTATAGAACATT+CGG | - | chr1.4:798163-798182 | None:intergenic | 25.0% |
! | TTAACTAAATGATTCATCAG+AGG | - | chr1.4:800038-800057 | None:intergenic | 25.0% |
! | TTATAGTCTGAAAAATGTGA+AGG | + | chr1.4:799046-799065 | MS.gene64008:intron | 25.0% |
! | TTCCATTCTTAACAATCTTT+GGG | + | chr1.4:799438-799457 | MS.gene64008:intron | 25.0% |
! | TTTCCATTCTTAACAATCTT+TGG | + | chr1.4:799437-799456 | MS.gene64008:intron | 25.0% |
! | TTTGTATGCAATTCATATCT+TGG | + | chr1.4:799553-799572 | MS.gene64008:CDS | 25.0% |
!! | AAAAAAGGGAAGTTGATTTA+TGG | + | chr1.4:798367-798386 | MS.gene64008:intron | 25.0% |
!! | ATCTAACGTTAATGTTTTAC+AGG | + | chr1.4:799523-799542 | MS.gene64008:intron | 25.0% |
!! | ATTGGTGATAAATAGCAAAT+GGG | - | chr1.4:800705-800724 | None:intergenic | 25.0% |
!! | TATTGGTGATAAATAGCAAA+TGG | - | chr1.4:800706-800725 | None:intergenic | 25.0% |
!! | TCTATTCTTTTACCTATTAC+CGG | - | chr1.4:795006-795025 | None:intergenic | 25.0% |
!! | TGTTTGGATTTTCAATGTTT+GGG | + | chr1.4:795324-795343 | MS.gene64008:intron | 25.0% |
!! | TTAGATTTGAGCTATTCTTT+TGG | + | chr1.4:797794-797813 | MS.gene64008:intron | 25.0% |
!! | TTGTTTGGATTTTCAATGTT+TGG | + | chr1.4:795323-795342 | MS.gene64008:intron | 25.0% |
!! | TTTAGAGTGAAGATGTAATT+TGG | + | chr1.4:796787-796806 | MS.gene64008:intron | 25.0% |
!! | TTTTGCTTTATGACAGAAAT+AGG | + | chr1.4:795685-795704 | MS.gene64008:intron | 25.0% |
!!! | ATACACAGGCTTTAAAAAAA+AGG | + | chr1.4:797951-797970 | MS.gene64008:intron | 25.0% |
!!! | CTCTATTTGATTTGATCTAA+AGG | - | chr1.4:798034-798053 | None:intergenic | 25.0% |
!!! | GTAGCTTTGGTTATAAATTT+AGG | + | chr1.4:800865-800884 | MS.gene64008:intron | 25.0% |
!!! | TAGCAGTTTCCATTTTTTTA+AGG | - | chr1.4:798865-798884 | None:intergenic | 25.0% |
!!! | TATTTTTTCCAGTATATGTG+AGG | + | chr1.4:797708-797727 | MS.gene64008:intron | 25.0% |
!!! | TGAAGTTTTGTTTCTTTTGT+CGG | + | chr1.4:800111-800130 | MS.gene64008:intron | 25.0% |
!!! | TTAAGGCATCTTATTTTGTT+TGG | + | chr1.4:795308-795327 | MS.gene64008:intron | 25.0% |
!!! | TTTTCAAGCTTAATGAATAG+TGG | + | chr1.4:800748-800767 | MS.gene64008:intron | 25.0% |
AAAAAGGGAAAGTGAAATCA+AGG | - | chr1.4:797601-797620 | None:intergenic | 30.0% | |
AAAAGGGAAAGTGAAATCAA+GGG | - | chr1.4:797600-797619 | None:intergenic | 30.0% | |
AAATATCCTCACAATATCCA+TGG | - | chr1.4:799590-799609 | None:intergenic | 30.0% | |
AACACTGAAGACATAAAAGA+TGG | + | chr1.4:796237-796256 | MS.gene64008:CDS | 30.0% | |
AAGATGCTACATCTTGTATT+TGG | - | chr1.4:797083-797102 | None:intergenic | 30.0% | |
AATTGAACACTGCTCAAATT+GGG | + | chr1.4:798396-798415 | MS.gene64008:intron | 30.0% | |
ACATGCATTTGAGAAATATG+AGG | + | chr1.4:796076-796095 | MS.gene64008:CDS | 30.0% | |
AGAAAAGAAATGTGAAGCTT+TGG | - | chr1.4:797303-797322 | None:intergenic | 30.0% | |
AGGTTATCAGTGATTGATTA+CGG | + | chr1.4:796104-796123 | MS.gene64008:CDS | 30.0% | |
ATACCTACTAATTCAACACA+TGG | - | chr1.4:799956-799975 | None:intergenic | 30.0% | |
ATAGATAAAAGAGGAATGCT+AGG | - | chr1.4:795092-795111 | None:intergenic | 30.0% | |
ATAGTCTGAAAAATGTGAAG+GGG | + | chr1.4:799048-799067 | MS.gene64008:intron | 30.0% | |
ATGACAGAGTTGTATAATGT+CGG | + | chr1.4:798286-798305 | MS.gene64008:intron | 30.0% | |
ATGACGTGTCTCATTATTAT+TGG | + | chr1.4:795035-795054 | MS.gene64008:intron | 30.0% | |
ATTAGCCATTGAAAGTAGAA+GGG | - | chr1.4:799194-799213 | None:intergenic | 30.0% | |
ATTATTTCCTTGGTATGCTT+GGG | + | chr1.4:796604-796623 | MS.gene64008:intron | 30.0% | |
CAAAATCCAAAACATGATGA+CGG | + | chr1.4:800217-800236 | MS.gene64008:CDS | 30.0% | |
CACGACATATGATAAATTGT+TGG | - | chr1.4:800311-800330 | None:intergenic | 30.0% | |
CATGCATTTGAGAAATATGA+GGG | + | chr1.4:796077-796096 | MS.gene64008:CDS | 30.0% | |
CCAAAATTACCTGAAGATAT+TGG | - | chr1.4:800723-800742 | None:intergenic | 30.0% | |
CTGTCTAGTTATTATTTCCT+TGG | + | chr1.4:796594-796613 | MS.gene64008:intron | 30.0% | |
CTTCTGAATTCGTTATTATC+TGG | + | chr1.4:798960-798979 | MS.gene64008:intron | 30.0% | |
GAAAATGGAATTTCTGATCT+TGG | + | chr1.4:800388-800407 | MS.gene64008:CDS | 30.0% | |
GACAAGAATAATTAAGTACC+TGG | - | chr1.4:801304-801323 | None:intergenic | 30.0% | |
GACAATACCAAATAATCGAA+GGG | + | chr1.4:796994-797013 | MS.gene64008:intron | 30.0% | |
GATATAGAGAGTAAACAACT+TGG | - | chr1.4:797113-797132 | None:intergenic | 30.0% | |
GGATCAAAAGTTTATTGTTC+TGG | + | chr1.4:800842-800861 | MS.gene64008:intron | 30.0% | |
GTTAGTTAGAAACCAATTCA+AGG | - | chr1.4:799134-799153 | None:intergenic | 30.0% | |
TAAGAAAACTTCATTCTCAC+AGG | + | chr1.4:796725-796744 | MS.gene64008:CDS | 30.0% | |
TAGAGAAAAATCTAGTGATG+AGG | + | chr1.4:798740-798759 | MS.gene64008:intron | 30.0% | |
TAGATAAAAGAGGAATGCTA+GGG | - | chr1.4:795091-795110 | None:intergenic | 30.0% | |
TATTATTTCCTTGGTATGCT+TGG | + | chr1.4:796603-796622 | MS.gene64008:intron | 30.0% | |
TCAACAACAAAAGTGGAATT+GGG | - | chr1.4:798260-798279 | None:intergenic | 30.0% | |
TCACATTAACAATGGTAGTA+TGG | - | chr1.4:796539-796558 | None:intergenic | 30.0% | |
TCTCTTGAGATTCAATGAAA+AGG | + | chr1.4:796423-796442 | MS.gene64008:intron | 30.0% | |
TGAATTCGTTATTATCTGGA+TGG | + | chr1.4:798964-798983 | MS.gene64008:intron | 30.0% | |
TGACAATACCAAATAATCGA+AGG | + | chr1.4:796993-797012 | MS.gene64008:intron | 30.0% | |
TGCAGAATTCACATTAACAA+TGG | - | chr1.4:796547-796566 | None:intergenic | 30.0% | |
TGGATATTGGATAAAGTTTG+TGG | - | chr1.4:798907-798926 | None:intergenic | 30.0% | |
TGTTCTGTATTTGTGTACTT+CGG | + | chr1.4:796463-796482 | MS.gene64008:intron | 30.0% | |
TTATGCTATTCGATATATGC+AGG | + | chr1.4:796643-796662 | MS.gene64008:intron | 30.0% | |
TTCAACAACAAAAGTGGAAT+TGG | - | chr1.4:798261-798280 | None:intergenic | 30.0% | |
! | ACAAGATGTAGCATCTTTTA+TGG | + | chr1.4:797086-797105 | MS.gene64008:intron | 30.0% |
! | ACATCTTACCCAATTTTCAA+TGG | - | chr1.4:797751-797770 | None:intergenic | 30.0% |
! | CCAATATCTTCAGGTAATTT+TGG | + | chr1.4:800720-800739 | MS.gene64008:intron | 30.0% |
! | GAACAGAAGCATAATCTATT+TGG | - | chr1.4:801149-801168 | None:intergenic | 30.0% |
! | GAGGATACTTCAATTTTGTA+TGG | - | chr1.4:800019-800038 | None:intergenic | 30.0% |
! | GATACTTCAATTTTGTATGG+TGG | - | chr1.4:800016-800035 | None:intergenic | 30.0% |
! | TTGGTGATAAATAGCAAATG+GGG | - | chr1.4:800704-800723 | None:intergenic | 30.0% |
!! | AAGAAGCATCCATTGAAAAT+TGG | + | chr1.4:797739-797758 | MS.gene64008:CDS | 30.0% |
!! | AGAAGCATCCATTGAAAATT+GGG | + | chr1.4:797740-797759 | MS.gene64008:CDS | 30.0% |
!! | CTGGTTTTTGCTTTGATAAT+GGG | + | chr1.4:797402-797421 | MS.gene64008:intron | 30.0% |
!!! | ACATAGTTTTGTGAGACTTT+GGG | + | chr1.4:795372-795391 | MS.gene64008:intron | 30.0% |
!!! | CAGTTTCCATTTTTTTAAGG+TGG | - | chr1.4:798862-798881 | None:intergenic | 30.0% |
!!! | GAAGTTTTGTTTCTTTTGTC+GGG | + | chr1.4:800112-800131 | MS.gene64008:intron | 30.0% |
!!! | TCCACTTTTGTTGTTGAAAA+AGG | + | chr1.4:798263-798282 | MS.gene64008:intron | 30.0% |
!!! | TCCTTTTTCAACAACAAAAG+TGG | - | chr1.4:798267-798286 | None:intergenic | 30.0% |
!!! | TCTGGTTTTTGCTTTGATAA+TGG | + | chr1.4:797401-797420 | MS.gene64008:intron | 30.0% |
!!! | TGAGGACATCTTATTTTGTT+TGG | + | chr1.4:796381-796400 | MS.gene64008:intron | 30.0% |
!!! | TGATGCATGCTATTTTATAC+TGG | + | chr1.4:798434-798453 | MS.gene64008:intron | 30.0% |
!!! | TTGAAAACGTTGATTTTGTG+TGG | + | chr1.4:798470-798489 | MS.gene64008:intron | 30.0% |
AAAAAAAGTCTGCCTCTTTC+CGG | - | chr1.4:794928-794947 | None:intergenic | 35.0% | |
AAAATCTACGTGATCATGGT+GGG | + | chr1.4:798803-798822 | MS.gene64008:intron | 35.0% | |
AAATTTGTATGTGGGGTGAA+AGG | + | chr1.4:798626-798645 | MS.gene64008:intron | 35.0% | |
AAGATATAGAAGACATGCGA+AGG | + | chr1.4:796358-796377 | MS.gene64008:CDS | 35.0% | |
ACACATCTAATGCCCTTATA+AGG | - | chr1.4:796933-796952 | None:intergenic | 35.0% | |
ACATCTTTAATGTCCGTATG+TGG | + | chr1.4:797853-797872 | MS.gene64008:intron | 35.0% | |
ACGGTGATATTGTAAACGAT+GGG | - | chr1.4:798192-798211 | None:intergenic | 35.0% | |
AGATGCCATACATGATATAC+AGG | - | chr1.4:799025-799044 | None:intergenic | 35.0% | |
AGTTACAGAAAAGCAAGATG+TGG | - | chr1.4:796572-796591 | None:intergenic | 35.0% | |
AGTTTGATAAAAGTGGCAAG+AGG | - | chr1.4:800678-800697 | None:intergenic | 35.0% | |
ATCAGAGATTTGCACAGAAT+TGG | - | chr1.4:801447-801466 | None:intergenic | 35.0% | |
ATCTCTCATTCGTCAGAAAA+TGG | + | chr1.4:800373-800392 | MS.gene64008:CDS | 35.0% | |
ATGCAATTCATATCTTGGAC+AGG | + | chr1.4:799558-799577 | MS.gene64008:CDS | 35.0% | |
ATTCTCGTTGTTGATATGGT+TGG | + | chr1.4:799232-799251 | MS.gene64008:CDS | 35.0% | |
ATTGAACACTGCTCAAATTG+GGG | + | chr1.4:798397-798416 | MS.gene64008:intron | 35.0% | |
ATTGTCCCTTCTACTTTCAA+TGG | + | chr1.4:799186-799205 | MS.gene64008:CDS | 35.0% | |
CAATCTACAGCTTGAGAAAA+TGG | + | chr1.4:801238-801257 | MS.gene64008:CDS | 35.0% | |
CACTTCCTTGATCTTCTAAT+CGG | + | chr1.4:800270-800289 | MS.gene64008:intron | 35.0% | |
CATTAGCCATTGAAAGTAGA+AGG | - | chr1.4:799195-799214 | None:intergenic | 35.0% | |
CATTTGAGAAATATGAGGGA+GGG | + | chr1.4:796081-796100 | MS.gene64008:CDS | 35.0% | |
CTCAATTGTATAGACAGAAG+AGG | - | chr1.4:796845-796864 | None:intergenic | 35.0% | |
CTTATCAAATGTTGCGCTAT+TGG | - | chr1.4:796709-796728 | None:intergenic | 35.0% | |
GAAATAAGCCTCACATATAC+TGG | - | chr1.4:797719-797738 | None:intergenic | 35.0% | |
GAATTGAACACTGCTCAAAT+TGG | + | chr1.4:798395-798414 | MS.gene64008:intron | 35.0% | |
GACCCAAAGATTGTTAAGAA+TGG | - | chr1.4:799443-799462 | None:intergenic | 35.0% | |
GGAAAAAAATCTAGTGGTGA+GGG | - | chr1.4:798076-798095 | None:intergenic | 35.0% | |
GTCTCATTATTATTGGAGTG+TGG | + | chr1.4:795042-795061 | MS.gene64008:intron | 35.0% | |
GTTTAACTATCATGTACTCC+TGG | + | chr1.4:801056-801075 | MS.gene64008:intron | 35.0% | |
GTTTGGATCACTCTTTGTAT+TGG | + | chr1.4:799791-799810 | MS.gene64008:intron | 35.0% | |
TAAAATCTACGTGATCATGG+TGG | + | chr1.4:798802-798821 | MS.gene64008:intron | 35.0% | |
TAACAACCATAAGTCATCGA+GGG | - | chr1.4:797678-797697 | None:intergenic | 35.0% | |
TACGGTGATATTGTAAACGA+TGG | - | chr1.4:798193-798212 | None:intergenic | 35.0% | |
TAGAACCGATTAGAAGATCA+AGG | - | chr1.4:800278-800297 | None:intergenic | 35.0% | |
TAGCCATGTGTTGAATTAGT+AGG | + | chr1.4:799950-799969 | MS.gene64008:intron | 35.0% | |
TATTACTTCCCCATGCTAAA+TGG | - | chr1.4:797979-797998 | None:intergenic | 35.0% | |
TATTATTGTCGATCAACGAC+CGG | - | chr1.4:796317-796336 | None:intergenic | 35.0% | |
TCAAAAGACAGTCAACTTAC+CGG | + | chr1.4:796276-796295 | MS.gene64008:CDS | 35.0% | |
TGACATTCTCGTTGTTGATA+TGG | + | chr1.4:799228-799247 | MS.gene64008:CDS | 35.0% | |
TGTATAGCATGTGTAGGTTT+GGG | + | chr1.4:801083-801102 | MS.gene64008:intron | 35.0% | |
TGTGTGGGAAAAAAATCTAG+TGG | - | chr1.4:798082-798101 | None:intergenic | 35.0% | |
TGTGTTCTCTATTGACCTAA+TGG | + | chr1.4:798777-798796 | MS.gene64008:intron | 35.0% | |
TTGGACCTGTATATCATGTA+TGG | + | chr1.4:799017-799036 | MS.gene64008:intron | 35.0% | |
TTGTATAGCATGTGTAGGTT+TGG | + | chr1.4:801082-801101 | MS.gene64008:intron | 35.0% | |
TTGTGACAACAAGTCAGAAA+TGG | - | chr1.4:800182-800201 | None:intergenic | 35.0% | |
TTTCTCTTTCAGTGCATCAA+CGG | - | chr1.4:799734-799753 | None:intergenic | 35.0% | |
! | ATTGACTCTTGGAAGGAAAA+TGG | + | chr1.4:800505-800524 | MS.gene64008:CDS | 35.0% |
! | CACGTAGATTTTAGACCATT+AGG | - | chr1.4:798795-798814 | None:intergenic | 35.0% |
! | CTTCAATTTTGTATGGTGGT+TGG | - | chr1.4:800012-800031 | None:intergenic | 35.0% |
! | CTTCACATTTCTTTTCTCTG+AGG | + | chr1.4:797306-797325 | MS.gene64008:intron | 35.0% |
! | GATTTGAGCTATTCTTTTGG+AGG | + | chr1.4:797797-797816 | MS.gene64008:intron | 35.0% |
! | GATTTTTCCATGAATCCTTC+CGG | - | chr1.4:794879-794898 | None:intergenic | 35.0% |
! | GCTGATTTCATAAGCTATCT+TGG | - | chr1.4:795634-795653 | None:intergenic | 35.0% |
! | GGAAGGAAAATGGTTTTTCT+AGG | + | chr1.4:800515-800534 | MS.gene64008:CDS | 35.0% |
! | GGACGTCTTATAAGTACTTT+TGG | - | chr1.4:797207-797226 | None:intergenic | 35.0% |
! | GTCTAAAATCTACGTGATCA+TGG | + | chr1.4:798799-798818 | MS.gene64008:intron | 35.0% |
! | TATTCTACAAAAAGAGGTGC+AGG | + | chr1.4:797466-797485 | MS.gene64008:intron | 35.0% |
! | TGCATCTAGAGCTATTCATT+TGG | - | chr1.4:799859-799878 | None:intergenic | 35.0% |
! | TTTAAGGTGGCATTTAGCAT+GGG | - | chr1.4:798849-798868 | None:intergenic | 35.0% |
! | TTTATTGTTCTGGGTAGCTT+TGG | + | chr1.4:800852-800871 | MS.gene64008:intron | 35.0% |
!! | AAAAAAGGTGCCATTTAGCA+TGG | + | chr1.4:797966-797985 | MS.gene64008:intron | 35.0% |
!! | AAAAAGGTGCCATTTAGCAT+GGG | + | chr1.4:797967-797986 | MS.gene64008:intron | 35.0% |
!! | AAGTTGACTGTCTTTTGACT+CGG | - | chr1.4:796274-796293 | None:intergenic | 35.0% |
!! | AGAAATCATTGACTCTTGGA+AGG | + | chr1.4:800498-800517 | MS.gene64008:CDS | 35.0% |
!! | CTCAAGAAATCATTGACTCT+TGG | + | chr1.4:800494-800513 | MS.gene64008:CDS | 35.0% |
!! | TTATTTGTCTTTGGAGCATC+TGG | + | chr1.4:797383-797402 | MS.gene64008:intron | 35.0% |
!!! | AGTGTTGGTTTTCATAGTTC+AGG | + | chr1.4:799474-799493 | MS.gene64008:intron | 35.0% |
!!! | GACATAGTTTTGTGAGACTT+TGG | + | chr1.4:795371-795390 | MS.gene64008:intron | 35.0% |
!!! | GTGTGGAAATTGCTGATTTT+AGG | + | chr1.4:798487-798506 | MS.gene64008:intron | 35.0% |
!!! | GTTCACTTTTTGTTGCGTTT+TGG | + | chr1.4:798998-799017 | MS.gene64008:intron | 35.0% |
!!! | TTTTAAGGTGGCATTTAGCA+TGG | - | chr1.4:798850-798869 | None:intergenic | 35.0% |
AAATCTACGTGATCATGGTG+GGG | + | chr1.4:798804-798823 | MS.gene64008:intron | 40.0% | |
AACAACCATAAGTCATCGAG+GGG | - | chr1.4:797677-797696 | None:intergenic | 40.0% | |
AAGAGCCTGCAAAGCTATAA+AGG | + | chr1.4:800456-800475 | MS.gene64008:CDS | 40.0% | |
AATGAACTATCGTAACCCCT+TGG | + | chr1.4:796011-796030 | MS.gene64008:intron | 40.0% | |
AATGCACTCATTTGCATGCA+TGG | - | chr1.4:801521-801540 | None:intergenic | 40.0% | |
AATGTCCAAGTATCCAAGTC+TGG | - | chr1.4:800646-800665 | None:intergenic | 40.0% | |
AATTATTGCTGCACCAGACT+TGG | + | chr1.4:800630-800649 | MS.gene64008:CDS | 40.0% | |
ACACATGCTATACAATCTCC+AGG | - | chr1.4:801077-801096 | None:intergenic | 40.0% | |
AGTAATAAACTTCCCTGCCA+TGG | + | chr1.4:797992-798011 | MS.gene64008:intron | 40.0% | |
AGTCTGGTGCAGCAATAATT+AGG | - | chr1.4:800630-800649 | None:intergenic | 40.0% | |
ATCCTCACAATATCCATGGA+TGG | - | chr1.4:799586-799605 | None:intergenic | 40.0% | |
ATCTTGTATTTGGATCCCTG+AGG | - | chr1.4:797073-797092 | None:intergenic | 40.0% | |
ATGCAAATGAGTGCATTTGG+GGG | + | chr1.4:801524-801543 | MS.gene64008:CDS | 40.0% | |
ATGCACTCATTTGCATGCAT+GGG | - | chr1.4:801520-801539 | None:intergenic | 40.0% | |
CAATCCAAACAGACTGTATG+TGG | - | chr1.4:795175-795194 | None:intergenic | 40.0% | |
CAGGAGCTAATACATGCATT+AGG | + | chr1.4:799493-799512 | MS.gene64008:intron | 40.0% | |
CATGCAAATGAGTGCATTTG+GGG | + | chr1.4:801523-801542 | MS.gene64008:CDS | 40.0% | |
CTATTCGATATATGCAGGCA+GGG | + | chr1.4:796648-796667 | MS.gene64008:intron | 40.0% | |
CTCAGTTATTTGCAATCCGA+TGG | - | chr1.4:801264-801283 | None:intergenic | 40.0% | |
CTTCTATATCTTCACCAGTG+AGG | - | chr1.4:796350-796369 | None:intergenic | 40.0% | |
GAAGCTACAGTTAGAGTCAA+TGG | + | chr1.4:798659-798678 | MS.gene64008:intron | 40.0% | |
GAGTTCACCCTTCGATTATT+TGG | - | chr1.4:797004-797023 | None:intergenic | 40.0% | |
GATTGCAAATAACTGAGCCT+TGG | + | chr1.4:801267-801286 | MS.gene64008:CDS | 40.0% | |
GCATGCAAATGAGTGCATTT+GGG | + | chr1.4:801522-801541 | MS.gene64008:CDS | 40.0% | |
GCATTTGAGAAATATGAGGG+AGG | + | chr1.4:796080-796099 | MS.gene64008:CDS | 40.0% | |
GGAGATTGTATAGCATGTGT+AGG | + | chr1.4:801077-801096 | MS.gene64008:intron | 40.0% | |
GGGAAAAAAATCTAGTGGTG+AGG | - | chr1.4:798077-798096 | None:intergenic | 40.0% | |
GTAACAACCATAAGTCATCG+AGG | - | chr1.4:797679-797698 | None:intergenic | 40.0% | |
TCTTGTATTTGGATCCCTGA+GGG | - | chr1.4:797072-797091 | None:intergenic | 40.0% | |
TGCATGCAAATGAGTGCATT+TGG | + | chr1.4:801521-801540 | MS.gene64008:CDS | 40.0% | |
TGTCTATACAATTGAGCTCC+AGG | + | chr1.4:796849-796868 | MS.gene64008:intron | 40.0% | |
! | ACTGCTCAAATTGGGGTTTT+AGG | + | chr1.4:798404-798423 | MS.gene64008:intron | 40.0% |
! | CGTTAATGTTTTACAGGCAC+TGG | + | chr1.4:799529-799548 | MS.gene64008:intron | 40.0% |
! | CTGCTCAAATTGGGGTTTTA+GGG | + | chr1.4:798405-798424 | MS.gene64008:intron | 40.0% |
! | GATCACTCTTTGTATTGGCA+TGG | + | chr1.4:799796-799815 | MS.gene64008:intron | 40.0% |
! | TACATCTCGATCTGCCATTT+AGG | + | chr1.4:796204-796223 | MS.gene64008:intron | 40.0% |
! | TCTTTTCTCTGCACCACATA+CGG | - | chr1.4:797869-797888 | None:intergenic | 40.0% |
! | TGAACTAGTTGCTTTGCCAA+GGG | - | chr1.4:796030-796049 | None:intergenic | 40.0% |
! | TTGAACTAGTTGCTTTGCCA+AGG | - | chr1.4:796031-796050 | None:intergenic | 40.0% |
!! | AAAAGGTGCCATTTAGCATG+GGG | + | chr1.4:797968-797987 | MS.gene64008:intron | 40.0% |
!! | GGTCTAGTGATTGATAGTGT+TGG | + | chr1.4:799459-799478 | MS.gene64008:intron | 40.0% |
AAAACCTACTTGACCATGGC+AGG | - | chr1.4:798008-798027 | None:intergenic | 45.0% | |
AAACCTACTTGACCATGGCA+GGG | - | chr1.4:798007-798026 | None:intergenic | 45.0% | |
AATGTGTGCATCAGTCAGCA+TGG | + | chr1.4:800345-800364 | MS.gene64008:CDS | 45.0% | |
ACTATCACCAAATGCCGGAA+GGG | - | chr1.4:796892-796911 | None:intergenic | 45.0% | |
ACTGAATCCCAAGCATACCA+AGG | - | chr1.4:796614-796633 | None:intergenic | 45.0% | |
AGTATCCCCTCGATGACTTA+TGG | + | chr1.4:797669-797688 | MS.gene64008:intron | 45.0% | |
ATAATGTCGGCAAAGCGTGT+GGG | + | chr1.4:798299-798318 | MS.gene64008:intron | 45.0% | |
ATAGAAGACATGCGAAGGTG+AGG | + | chr1.4:796363-796382 | MS.gene64008:intron | 45.0% | |
ATCTTCACCAGTGAGGCTTT+GGG | - | chr1.4:796343-796362 | None:intergenic | 45.0% | |
ATGCATGGGTGAGTTCTTGA+TGG | - | chr1.4:801506-801525 | None:intergenic | 45.0% | |
CACCATCCATGGATATTGTG+AGG | + | chr1.4:799581-799600 | MS.gene64008:CDS | 45.0% | |
CAGCTTGAGAAAATGGCCAT+CGG | + | chr1.4:801245-801264 | MS.gene64008:CDS | 45.0% | |
CTCGTTGTTGATATGGTTGG+TGG | + | chr1.4:799235-799254 | MS.gene64008:CDS | 45.0% | |
CTGATTCAGATTCTTGCGTG+TGG | + | chr1.4:799159-799178 | MS.gene64008:intron | 45.0% | |
GAAGCTCACTATATCTGTGC+AGG | + | chr1.4:797146-797165 | MS.gene64008:intron | 45.0% | |
GAAGGGTGAACTCTTTAGCA+AGG | + | chr1.4:797011-797030 | MS.gene64008:intron | 45.0% | |
GCCTAAAACCTACTTGACCA+TGG | - | chr1.4:798012-798031 | None:intergenic | 45.0% | |
GCTATTCGATATATGCAGGC+AGG | + | chr1.4:796647-796666 | MS.gene64008:intron | 45.0% | |
GGGGCAGAGTTTGATAAAAG+TGG | - | chr1.4:800685-800704 | None:intergenic | 45.0% | |
GGTACCACATACAGTCTGTT+TGG | + | chr1.4:795168-795187 | MS.gene64008:intron | 45.0% | |
TAAGCGACGAAATCTGCAAG+AGG | + | chr1.4:799614-799633 | MS.gene64008:CDS | 45.0% | |
TATAATGTCGGCAAAGCGTG+TGG | + | chr1.4:798298-798317 | MS.gene64008:intron | 45.0% | |
TATCTTCACCAGTGAGGCTT+TGG | - | chr1.4:796344-796363 | None:intergenic | 45.0% | |
TGGTTTATGAGAAAACGCCG+AGG | + | chr1.4:798679-798698 | MS.gene64008:intron | 45.0% | |
TGTGTAGACAGAAACCCTCA+GGG | + | chr1.4:797055-797074 | MS.gene64008:intron | 45.0% | |
TTATGAGAAAACGCCGAGGT+GGG | + | chr1.4:798683-798702 | MS.gene64008:intron | 45.0% | |
TTGAGAAATATGAGGGAGGG+AGG | + | chr1.4:796084-796103 | MS.gene64008:CDS | 45.0% | |
TTGGGGGTTACATTCTCAGT+GGG | + | chr1.4:801540-801559 | MS.gene64008:CDS | 45.0% | |
TTGTGCATGCAAGTTGCTAG+AGG | - | chr1.4:801221-801240 | None:intergenic | 45.0% | |
TTGTGTAGACAGAAACCCTC+AGG | + | chr1.4:797054-797073 | MS.gene64008:intron | 45.0% | |
TTTATGAGAAAACGCCGAGG+TGG | + | chr1.4:798682-798701 | MS.gene64008:intron | 45.0% | |
TTTGGGGGTTACATTCTCAG+TGG | + | chr1.4:801539-801558 | MS.gene64008:CDS | 45.0% | |
! | ACACTGCCGTCATCATGTTT+TGG | - | chr1.4:800226-800245 | None:intergenic | 45.0% |
! | AGTGTGGCAAAGAGTGTGTA+GGG | + | chr1.4:795058-795077 | MS.gene64008:intron | 45.0% |
! | GAACTAGTTGCTTTGCCAAG+GGG | - | chr1.4:796029-796048 | None:intergenic | 45.0% |
! | GCCATGGTCAAGTAGGTTTT+AGG | + | chr1.4:798008-798027 | MS.gene64008:intron | 45.0% |
! | TCAACTTACCGGTGAGTTGA+GGG | + | chr1.4:796287-796306 | MS.gene64008:CDS | 45.0% |
! | TCCAGCCTTTATAGCTTTGC+AGG | - | chr1.4:800464-800483 | None:intergenic | 45.0% |
! | TTACCTATTACCGGTTGCAC+AGG | - | chr1.4:794997-795016 | None:intergenic | 45.0% |
!! | AAAACATGATGACGGCAGTG+TGG | + | chr1.4:800225-800244 | MS.gene64008:CDS | 45.0% |
!! | AATGGTGGTGGAAGATGTGT+GGG | - | chr1.4:798097-798116 | None:intergenic | 45.0% |
AAAGGTCACCTTCGAGCAAC+AGG | - | chr1.4:797228-797247 | None:intergenic | 50.0% | |
AATACTGCCCAAAGCCTCAC+TGG | + | chr1.4:796333-796352 | MS.gene64008:CDS | 50.0% | |
AGTATGGAGAGACCGGAAAG+AGG | + | chr1.4:794913-794932 | MS.gene64008:intron | 50.0% | |
CAACCTGTGCAACCGGTAAT+AGG | + | chr1.4:794991-795010 | MS.gene64008:intron | 50.0% | |
CACTATCACCAAATGCCGGA+AGG | - | chr1.4:796893-796912 | None:intergenic | 50.0% | |
CCTTCTTTCAGAACACGGGT+GGG | - | chr1.4:798124-798143 | None:intergenic | 50.0% | |
CGCTCACTATCACCAAATGC+CGG | - | chr1.4:796897-796916 | None:intergenic | 50.0% | |
CGTCCCTTCTTTCAGAACAC+GGG | - | chr1.4:798128-798147 | None:intergenic | 50.0% | |
CTGCACCAGACTTGGATACT+TGG | + | chr1.4:800638-800657 | MS.gene64008:CDS | 50.0% | |
CTTCAGACCGGAAGGATTCA+TGG | + | chr1.4:794869-794888 | MS.gene64008:CDS | 50.0% | |
CTTCTTTCAGAACACGGGTG+GGG | - | chr1.4:798123-798142 | None:intergenic | 50.0% | |
GCCTGCAAAGCTATAAAGGC+TGG | + | chr1.4:800460-800479 | MS.gene64008:CDS | 50.0% | |
GCGTCCCTTCTTTCAGAACA+CGG | - | chr1.4:798129-798148 | None:intergenic | 50.0% | |
GGAAAAATCCGAAGACGCCA+TGG | + | chr1.4:794890-794909 | MS.gene64008:CDS | 50.0% | |
GGCTCTTAGAGCAGGAAATG+TGG | - | chr1.4:800443-800462 | None:intergenic | 50.0% | |
GGGTGAACTCTTTAGCAAGG+CGG | + | chr1.4:797014-797033 | MS.gene64008:intron | 50.0% | |
GTCAACTTACCGGTGAGTTG+AGG | + | chr1.4:796286-796305 | MS.gene64008:CDS | 50.0% | |
TAAGACGTCCTGTTGCTCGA+AGG | + | chr1.4:797217-797236 | MS.gene64008:CDS | 50.0% | |
TACTCGCACTCTAACCAGCA+CGG | + | chr1.4:796181-796200 | MS.gene64008:intron | 50.0% | |
TATGAGAAAACGCCGAGGTG+GGG | + | chr1.4:798684-798703 | MS.gene64008:intron | 50.0% | |
TCCATACTCCATGGCGTCTT+CGG | - | chr1.4:794901-794920 | None:intergenic | 50.0% | |
TCCATAGCAACCTGTGCAAC+CGG | + | chr1.4:794984-795003 | MS.gene64008:intron | 50.0% | |
TGCTAACAAGTCCACCCTTC+CGG | + | chr1.4:796875-796894 | MS.gene64008:intron | 50.0% | |
TTCTTTCAGAACACGGGTGG+GGG | - | chr1.4:798122-798141 | None:intergenic | 50.0% | |
! | AGAGTTTGCTTCAGACCGGA+AGG | + | chr1.4:794861-794880 | MS.gene64008:CDS | 50.0% |
! | ATATGCAGGCAGGGTGCTAA+GGG | + | chr1.4:796657-796676 | MS.gene64008:intron | 50.0% |
! | CGAGTAAAAGCGAAGAGTGC+AGG | - | chr1.4:796167-796186 | None:intergenic | 50.0% |
! | CGCTAGAGTTTGCTTCAGAC+CGG | + | chr1.4:794857-794876 | MS.gene64008:CDS | 50.0% |
! | GAGTGTGGCAAAGAGTGTGT+AGG | + | chr1.4:795057-795076 | MS.gene64008:intron | 50.0% |
! | TACGTGATCATGGTGGGGAA+GGG | + | chr1.4:798809-798828 | MS.gene64008:intron | 50.0% |
! | TATATGCAGGCAGGGTGCTA+AGG | + | chr1.4:796656-796675 | MS.gene64008:intron | 50.0% |
!! | ATGGTTGGTGGCCTTCTTAC+TGG | + | chr1.4:799247-799266 | MS.gene64008:CDS | 50.0% |
!! | CCACCCGTGTTCTGAAAGAA+GGG | + | chr1.4:798122-798141 | MS.gene64008:intron | 50.0% |
!! | GAATGGTGGTGGAAGATGTG+TGG | - | chr1.4:798098-798117 | None:intergenic | 50.0% |
!! | GTGGACTTGTTAGCAAGTCC+TGG | - | chr1.4:796870-796889 | None:intergenic | 50.0% |
!!! | GACTGTCTTTTGACTCGGCT+TGG | - | chr1.4:796269-796288 | None:intergenic | 50.0% |
AAGTCCACCCTTCCGGCATT+TGG | + | chr1.4:796882-796901 | MS.gene64008:intron | 55.0% | |
ACCGGTTGCACAGGTTGCTA+TGG | - | chr1.4:794988-795007 | None:intergenic | 55.0% | |
ACCTGGTATTCGCGTAGCCA+AGG | - | chr1.4:801287-801306 | None:intergenic | 55.0% | |
ATCACCAAATGCCGGAAGGG+TGG | - | chr1.4:796889-796908 | None:intergenic | 55.0% | |
ATGAGAAAACGCCGAGGTGG+GGG | + | chr1.4:798685-798704 | MS.gene64008:intron | 55.0% | |
CAGATCGAGATGTACCGTGC+TGG | - | chr1.4:796198-796217 | None:intergenic | 55.0% | |
CCCTTCTTTCAGAACACGGG+TGG | - | chr1.4:798125-798144 | None:intergenic | 55.0% | |
CTCTAGCGAGTTTACTCGCG+AGG | - | chr1.4:794845-794864 | None:intergenic | 55.0% | |
CTGCCACTGCACCAGTAAGA+AGG | - | chr1.4:799261-799280 | None:intergenic | 55.0% | |
CTTCCCTGCCATGGTCAAGT+AGG | + | chr1.4:798001-798020 | MS.gene64008:intron | 55.0% | |
CTTTAGCAAGGCGGCAACTC+TGG | + | chr1.4:797023-797042 | MS.gene64008:intron | 55.0% | |
GCCATGGAGTATGGAGAGAC+CGG | + | chr1.4:794906-794925 | MS.gene64008:intron | 55.0% | |
GCTTTGCAGGCTCTTAGAGC+AGG | - | chr1.4:800451-800470 | None:intergenic | 55.0% | |
GGAGAATGTAGGGTGGATGG+TGG | + | chr1.4:798706-798725 | MS.gene64008:intron | 55.0% | |
GTGTGCATCAGTCAGCATGG+AGG | + | chr1.4:800348-800367 | MS.gene64008:CDS | 55.0% | |
TCCGAAGACGCCATGGAGTA+TGG | + | chr1.4:794897-794916 | MS.gene64008:intron | 55.0% | |
TCCGGTCTCTCCATACTCCA+TGG | - | chr1.4:794910-794929 | None:intergenic | 55.0% | |
TCTTGGACAGGCACCATCCA+TGG | + | chr1.4:799570-799589 | MS.gene64008:CDS | 55.0% | |
TGGCCTTCTTACTGGTGCAG+TGG | + | chr1.4:799255-799274 | MS.gene64008:CDS | 55.0% | |
! | CTACGTGATCATGGTGGGGA+AGG | + | chr1.4:798808-798827 | MS.gene64008:intron | 55.0% |
!! | CCCACCCGTGTTCTGAAAGA+AGG | + | chr1.4:798121-798140 | MS.gene64008:intron | 55.0% |
AGAACACGGGTGGGGGAGAA+TGG | - | chr1.4:798115-798134 | None:intergenic | 60.0% | |
AGGTGGGGGAGAATGTAGGG+TGG | + | chr1.4:798699-798718 | MS.gene64008:intron | 60.0% | |
CCCTACATTCTCCCCCACCT+CGG | - | chr1.4:798699-798718 | None:intergenic | 60.0% | |
CCGAGGTGGGGGAGAATGTA+GGG | + | chr1.4:798696-798715 | MS.gene64008:intron | 60.0% | |
CCGGTTGTCCCTCAACTCAC+CGG | - | chr1.4:796298-796317 | None:intergenic | 60.0% | |
GCCTTGGCTACGCGAATACC+AGG | + | chr1.4:801283-801302 | MS.gene64008:CDS | 60.0% | |
GGGGGAGAATGTAGGGTGGA+TGG | + | chr1.4:798703-798722 | MS.gene64008:intron | 60.0% | |
GTCGGCAAAGCGTGTGGGTA+AGG | + | chr1.4:798304-798323 | MS.gene64008:intron | 60.0% | |
! | CCGGTGAGTTGAGGGACAAC+CGG | + | chr1.4:796295-796314 | MS.gene64008:CDS | 60.0% |
! | GCAGTGGCAGAGCGTTTAGG+AGG | + | chr1.4:799271-799290 | MS.gene64008:CDS | 60.0% |
! | GGTGCAGTGGCAGAGCGTTT+AGG | + | chr1.4:799268-799287 | MS.gene64008:CDS | 60.0% |
! | TGAAGGGGTGTGTGCGTGTG+TGG | + | chr1.4:799063-799082 | MS.gene64008:intron | 60.0% |
ACACGGGTGGGGGAGAATGG+TGG | - | chr1.4:798112-798131 | None:intergenic | 65.0% | |
GCCGAGGTGGGGGAGAATGT+AGG | + | chr1.4:798695-798714 | MS.gene64008:intron | 65.0% | |
CGGGTGGGGGAGAATGGTGG+TGG | - | chr1.4:798109-798128 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 794828 | 801583 | 794828 | ID=MS.gene64008 |
chr1.4 | mRNA | 794828 | 801583 | 794828 | ID=MS.gene64008.t1;Parent=MS.gene64008 |
chr1.4 | exon | 794828 | 794913 | 794828 | ID=MS.gene64008.t1.exon1;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 794828 | 794913 | 794828 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 796067 | 796146 | 796067 | ID=MS.gene64008.t1.exon2;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 796067 | 796146 | 796067 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 796226 | 796379 | 796226 | ID=MS.gene64008.t1.exon3;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 796226 | 796379 | 796226 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 796665 | 796746 | 796665 | ID=MS.gene64008.t1.exon4;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 796665 | 796746 | 796665 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 797168 | 797238 | 797168 | ID=MS.gene64008.t1.exon5;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 797168 | 797238 | 797168 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 797720 | 797761 | 797720 | ID=MS.gene64008.t1.exon6;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 797720 | 797761 | 797720 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 799168 | 799292 | 799168 | ID=MS.gene64008.t1.exon7;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 799168 | 799292 | 799168 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 799545 | 799635 | 799545 | ID=MS.gene64008.t1.exon8;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 799545 | 799635 | 799545 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 800165 | 800261 | 800165 | ID=MS.gene64008.t1.exon9;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 800165 | 800261 | 800165 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 800340 | 800536 | 800340 | ID=MS.gene64008.t1.exon10;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 800340 | 800536 | 800340 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 800627 | 800732 | 800627 | ID=MS.gene64008.t1.exon11;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 800627 | 800732 | 800627 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 801218 | 801304 | 801218 | ID=MS.gene64008.t1.exon12;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 801218 | 801304 | 801218 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
chr1.4 | exon | 801497 | 801583 | 801497 | ID=MS.gene64008.t1.exon13;Parent=MS.gene64008.t1 |
chr1.4 | CDS | 801497 | 801583 | 801497 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
Gene Sequence |
Protein sequence |