Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64008.t1 | XP_003589467.1 | 97.9 | 378 | 8 | 0 | 57 | 434 | 80 | 457 | 2.00E-203 | 718.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64008.t1 | Q54UB1 | 33.8 | 396 | 233 | 7 | 44 | 431 | 73 | 447 | 2.9e-49 | 197.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64008.t1 | G7I755 | 97.9 | 378 | 8 | 0 | 57 | 434 | 80 | 457 | 1.5e-203 | 718.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene054179 | MS.gene64008 | PPI |
| MS.gene64008 | MS.gene059414 | PPI |
| MS.gene64008 | MS.gene066758 | PPI |
| MS.gene77102 | MS.gene64008 | PPI |
| MS.gene047362 | MS.gene64008 | PPI |
| MS.gene004176 | MS.gene64008 | PPI |
| MS.gene64008 | MS.gene99758 | PPI |
| MS.gene64008 | MS.gene054180 | PPI |
| MS.gene64008 | MS.gene002506 | PPI |
| MS.gene01479 | MS.gene64008 | PPI |
| MS.gene64008 | MS.gene30726 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64008.t1 | MTR_1g024920 | 97.884 | 378 | 8 | 0 | 57 | 434 | 80 | 457 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64008.t1 | AT2G45730 | 61.198 | 384 | 128 | 4 | 61 | 434 | 74 | 446 | 1.82e-149 | 432 |
Find 94 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGCATCCATTGAAAAT+TGG | 0.166239 | 1.4:+797739 | MS.gene64008:CDS |
| ATGGTTGGTGGCCTTCTTAC+TGG | 0.198600 | 1.4:+799247 | MS.gene64008:CDS |
| TCCAGCCTTTATAGCTTTGC+AGG | 0.222527 | 1.4:-800461 | None:intergenic |
| ATTGACTCTTGGAAGGAAAA+TGG | 0.240508 | 1.4:+800505 | MS.gene64008:CDS |
| CTTATCAAATGTTGCGCTAT+TGG | 0.243677 | 1.4:-796706 | None:intergenic |
| ATCTCTCATTCGTCAGAAAA+TGG | 0.252753 | 1.4:+800373 | MS.gene64008:CDS |
| AAGTGCAATTTACATTTAAT+TGG | 0.266218 | 1.4:-800252 | None:intergenic |
| TTTGTATGCAATTCATATCT+TGG | 0.278999 | 1.4:+799553 | MS.gene64008:CDS |
| CAATCTACAGCTTGAGAAAA+TGG | 0.282349 | 1.4:+801238 | MS.gene64008:CDS |
| GAAAATGGAATTTCTGATCT+TGG | 0.300851 | 1.4:+800388 | MS.gene64008:CDS |
| TATCTTCACCAGTGAGGCTT+TGG | 0.305154 | 1.4:-796341 | None:intergenic |
| ACACTGCCGTCATCATGTTT+TGG | 0.317670 | 1.4:-800223 | None:intergenic |
| CTTCAGACCGGAAGGATTCA+TGG | 0.334144 | 1.4:+794869 | MS.gene64008:CDS |
| GGACGTCTTATAAGTACTTT+TGG | 0.334717 | 1.4:-797204 | None:intergenic |
| TGACATTCTCGTTGTTGATA+TGG | 0.336210 | 1.4:+799228 | MS.gene64008:CDS |
| AAGAGCCTGCAAAGCTATAA+AGG | 0.342065 | 1.4:+800456 | MS.gene64008:CDS |
| CATTAGCCATTGAAAGTAGA+AGG | 0.344540 | 1.4:-799192 | None:intergenic |
| TGCATGCAAATGAGTGCATT+TGG | 0.351990 | 1.4:+801521 | MS.gene64008:CDS |
| CCAAAATTACCTGAAGATAT+TGG | 0.358571 | 1.4:-800720 | None:intergenic |
| TCCATACTCCATGGCGTCTT+CGG | 0.367629 | 1.4:-794898 | None:intergenic |
| GCATGCAAATGAGTGCATTT+GGG | 0.375049 | 1.4:+801522 | MS.gene64008:CDS |
| AGAAGCATCCATTGAAAATT+GGG | 0.379799 | 1.4:+797740 | MS.gene64008:CDS |
| AGTCTGGTGCAGCAATAATT+AGG | 0.382222 | 1.4:-800627 | None:intergenic |
| CTGCACCAGACTTGGATACT+TGG | 0.382708 | 1.4:+800638 | MS.gene64008:CDS |
| CTCAAGAAATCATTGACTCT+TGG | 0.389186 | 1.4:+800494 | MS.gene64008:CDS |
| ATCTTCACCAGTGAGGCTTT+GGG | 0.389493 | 1.4:-796340 | None:intergenic |
| AGGTTATCAGTGATTGATTA+CGG | 0.391156 | 1.4:+796104 | MS.gene64008:CDS |
| GGTGCAGTGGCAGAGCGTTT+AGG | 0.395962 | 1.4:+799268 | MS.gene64008:CDS |
| TATTTATCACCAATATCTTC+AGG | 0.407320 | 1.4:+800711 | MS.gene64008:CDS |
| ATTGTCCCTTCTACTTTCAA+TGG | 0.417484 | 1.4:+799186 | MS.gene64008:CDS |
| AAAGGTCACCTTCGAGCAAC+AGG | 0.421884 | 1.4:-797225 | None:intergenic |
| TATTGGTGATAAATAGCAAA+TGG | 0.425158 | 1.4:-800703 | None:intergenic |
| TTGTGACAACAAGTCAGAAA+TGG | 0.435540 | 1.4:-800179 | None:intergenic |
| TTATTTATTGCAGAATTGTA+AGG | 0.438615 | 1.4:+800152 | MS.gene64008:intron |
| ATTGGTGATAAATAGCAAAT+GGG | 0.443406 | 1.4:-800702 | None:intergenic |
| GCCTGCAAAGCTATAAAGGC+TGG | 0.451952 | 1.4:+800460 | MS.gene64008:CDS |
| TCAAAAGACAGTCAACTTAC+CGG | 0.453483 | 1.4:+796276 | MS.gene64008:CDS |
| AATTATTGCTGCACCAGACT+TGG | 0.465888 | 1.4:+800630 | MS.gene64008:CDS |
| ACATGCATTTGAGAAATATG+AGG | 0.473037 | 1.4:+796076 | MS.gene64008:CDS |
| TATATGCAGGCAGGGTGCTA+AGG | 0.486648 | 1.4:+796656 | MS.gene64008:intron |
| CTCGTTGTTGATATGGTTGG+TGG | 0.492274 | 1.4:+799235 | MS.gene64008:CDS |
| CGCTAGAGTTTGCTTCAGAC+CGG | 0.496983 | 1.4:+794857 | MS.gene64008:CDS |
| ATGCATGGGTGAGTTCTTGA+TGG | 0.501143 | 1.4:-801503 | None:intergenic |
| TCAACTTACCGGTGAGTTGA+GGG | 0.503070 | 1.4:+796287 | MS.gene64008:CDS |
| AATACTGCCCAAAGCCTCAC+TGG | 0.508455 | 1.4:+796333 | MS.gene64008:CDS |
| CTGCCACTGCACCAGTAAGA+AGG | 0.508496 | 1.4:-799258 | None:intergenic |
| CCGGTGAGTTGAGGGACAAC+CGG | 0.511377 | 1.4:+796295 | MS.gene64008:CDS |
| AATGTCCAAGTATCCAAGTC+TGG | 0.512151 | 1.4:-800643 | None:intergenic |
| TTGAGAAATATGAGGGAGGG+AGG | 0.513750 | 1.4:+796084 | MS.gene64008:CDS |
| AATGCACTCATTTGCATGCA+TGG | 0.517471 | 1.4:-801518 | None:intergenic |
| TAAGAAAACTTCATTCTCAC+AGG | 0.523266 | 1.4:+796725 | MS.gene64008:CDS |
| GTCAACTTACCGGTGAGTTG+AGG | 0.524399 | 1.4:+796286 | MS.gene64008:CDS |
| TCTTGGACAGGCACCATCCA+TGG | 0.531216 | 1.4:+799570 | MS.gene64008:CDS |
| ATGCAATTCATATCTTGGAC+AGG | 0.532059 | 1.4:+799558 | MS.gene64008:CDS |
| ATTCTCGTTGTTGATATGGT+TGG | 0.536995 | 1.4:+799232 | MS.gene64008:CDS |
| CTCAGTTATTTGCAATCCGA+TGG | 0.541352 | 1.4:-801261 | None:intergenic |
| AACACTGAAGACATAAAAGA+TGG | 0.541808 | 1.4:+796237 | MS.gene64008:CDS |
| GCTTTGCAGGCTCTTAGAGC+AGG | 0.543207 | 1.4:-800448 | None:intergenic |
| GGGGCAGAGTTTGATAAAAG+TGG | 0.553292 | 1.4:-800682 | None:intergenic |
| AAATATCCTCACAATATCCA+TGG | 0.553785 | 1.4:-799587 | None:intergenic |
| GATTGCAAATAACTGAGCCT+TGG | 0.554849 | 1.4:+801267 | MS.gene64008:CDS |
| AGAAATCATTGACTCTTGGA+AGG | 0.556926 | 1.4:+800498 | MS.gene64008:CDS |
| CATGCATTTGAGAAATATGA+GGG | 0.559584 | 1.4:+796077 | MS.gene64008:CDS |
| ATATGCAGGCAGGGTGCTAA+GGG | 0.562125 | 1.4:+796657 | MS.gene64008:intron |
| AGAGTTTGCTTCAGACCGGA+AGG | 0.573615 | 1.4:+794861 | MS.gene64008:CDS |
| GGCTCTTAGAGCAGGAAATG+TGG | 0.580777 | 1.4:-800440 | None:intergenic |
| CTCTAGCGAGTTTACTCGCG+AGG | 0.583793 | 1.4:-794842 | None:intergenic |
| ACCTGGTATTCGCGTAGCCA+AGG | 0.585659 | 1.4:-801284 | None:intergenic |
| CCGGTTGTCCCTCAACTCAC+CGG | 0.592179 | 1.4:-796295 | None:intergenic |
| GCCTTGGCTACGCGAATACC+AGG | 0.594448 | 1.4:+801283 | MS.gene64008:CDS |
| TGGCCTTCTTACTGGTGCAG+TGG | 0.596291 | 1.4:+799255 | MS.gene64008:CDS |
| ATGCACTCATTTGCATGCAT+GGG | 0.597902 | 1.4:-801517 | None:intergenic |
| TATTATTGTCGATCAACGAC+CGG | 0.599829 | 1.4:-796314 | None:intergenic |
| ATCCTCACAATATCCATGGA+TGG | 0.603371 | 1.4:-799583 | None:intergenic |
| CATGCAAATGAGTGCATTTG+GGG | 0.609044 | 1.4:+801523 | MS.gene64008:CDS |
| ATTAGCCATTGAAAGTAGAA+GGG | 0.613664 | 1.4:-799191 | None:intergenic |
| CTGATTCAGATTCTTGCGTG+TGG | 0.618711 | 1.4:+799159 | MS.gene64008:intron |
| CATTTGAGAAATATGAGGGA+GGG | 0.622790 | 1.4:+796081 | MS.gene64008:CDS |
| CAAAATCCAAAACATGATGA+CGG | 0.624523 | 1.4:+800217 | MS.gene64008:CDS |
| CACCATCCATGGATATTGTG+AGG | 0.625248 | 1.4:+799581 | MS.gene64008:CDS |
| AATGTGTGCATCAGTCAGCA+TGG | 0.631729 | 1.4:+800345 | MS.gene64008:CDS |
| GCAGTGGCAGAGCGTTTAGG+AGG | 0.634206 | 1.4:+799271 | MS.gene64008:CDS |
| CAGCTTGAGAAAATGGCCAT+CGG | 0.636892 | 1.4:+801245 | MS.gene64008:CDS |
| AAGATATAGAAGACATGCGA+AGG | 0.637003 | 1.4:+796358 | MS.gene64008:CDS |
| TAAGACGTCCTGTTGCTCGA+AGG | 0.647595 | 1.4:+797217 | MS.gene64008:CDS |
| TTGGTGATAAATAGCAAATG+GGG | 0.648921 | 1.4:-800701 | None:intergenic |
| TAAGCGACGAAATCTGCAAG+AGG | 0.655897 | 1.4:+799614 | MS.gene64008:CDS |
| GCATTTGAGAAATATGAGGG+AGG | 0.660721 | 1.4:+796080 | MS.gene64008:CDS |
| CTTCTATATCTTCACCAGTG+AGG | 0.664706 | 1.4:-796347 | None:intergenic |
| AAAACATGATGACGGCAGTG+TGG | 0.681492 | 1.4:+800225 | MS.gene64008:CDS |
| TTGTGCATGCAAGTTGCTAG+AGG | 0.695261 | 1.4:-801218 | None:intergenic |
| AGTTTGATAAAAGTGGCAAG+AGG | 0.695485 | 1.4:-800675 | None:intergenic |
| GTGTGCATCAGTCAGCATGG+AGG | 0.745962 | 1.4:+800348 | MS.gene64008:CDS |
| ATGCAAATGAGTGCATTTGG+GGG | 0.767185 | 1.4:+801524 | MS.gene64008:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTAATA+TGG | + | chr1.4:799336-799355 | MS.gene64008:intron | 0.0% |
| !! | CAATAATAACATAAAAATAA+AGG | - | chr1.4:797246-797265 | None:intergenic | 10.0% |
| !! | TTCATAAAAGTAAATAAAAA+GGG | + | chr1.4:801366-801385 | MS.gene64008:intron | 10.0% |
| !!! | ATAAATATTTTATTTGTCTT+TGG | + | chr1.4:797374-797393 | MS.gene64008:intron | 10.0% |
| !!! | GAAAAAAAATTACAATTTTA+CGG | - | chr1.4:798211-798230 | None:intergenic | 10.0% |
| !!! | TTTTAACTCAAAAAAATAAT+TGG | - | chr1.4:799667-799686 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTTTTTAAATAGA+AGG | - | chr1.4:798233-798252 | None:intergenic | 10.0% |
| !! | GTTCATAAAAGTAAATAAAA+AGG | + | chr1.4:801365-801384 | MS.gene64008:intron | 15.0% |
| !! | TAAAATGCTATATATATTCA+TGG | - | chr1.4:797833-797852 | None:intergenic | 15.0% |
| !! | TTAAAATTCTTATACATTCA+AGG | - | chr1.4:797927-797946 | None:intergenic | 15.0% |
| !!! | AAAATTTTCAATACTTCATT+TGG | + | chr1.4:801114-801133 | MS.gene64008:intron | 15.0% |
| !!! | ATTCTTGAATTTTGTTTTTT+GGG | + | chr1.4:798935-798954 | MS.gene64008:intron | 15.0% |
| !!! | CTTATTTGTTTTGAATTTTA+AGG | + | chr1.4:795291-795310 | MS.gene64008:intron | 15.0% |
| !!! | TATTCTTGAATTTTGTTTTT+TGG | + | chr1.4:798934-798953 | MS.gene64008:intron | 15.0% |
| !!! | TGTTAAACATTTTTTTTAAC+AGG | - | chr1.4:798607-798626 | None:intergenic | 15.0% |
| !!! | TTATTTACTTTTATGAACAA+AGG | - | chr1.4:801363-801382 | None:intergenic | 15.0% |
| !! | AAATGTTTATAGGTTTCTAT+CGG | + | chr1.4:799925-799944 | MS.gene64008:intron | 20.0% |
| !! | AAATTCAAGAATAAGTTGTT+TGG | - | chr1.4:798927-798946 | None:intergenic | 20.0% |
| !! | AAGTGCAATTTACATTTAAT+TGG | - | chr1.4:800255-800274 | None:intergenic | 20.0% |
| !! | AATAAGTTGTTTATTCAAAC+AGG | + | chr1.4:795755-795774 | MS.gene64008:intron | 20.0% |
| !! | AATCAAAGAGAAATGTTTAT+AGG | + | chr1.4:799915-799934 | MS.gene64008:intron | 20.0% |
| !! | AATCAAATATGTAGATGATA+TGG | + | chr1.4:797340-797359 | MS.gene64008:intron | 20.0% |
| !! | AATCTCTGATAACTATTTAA+TGG | + | chr1.4:801457-801476 | MS.gene64008:intron | 20.0% |
| !! | AGGAAAGAAAGAATTAAAAT+AGG | + | chr1.4:798324-798343 | MS.gene64008:intron | 20.0% |
| !! | ATAAGTTGTTTATTCAAACA+GGG | + | chr1.4:795756-795775 | MS.gene64008:intron | 20.0% |
| !! | ATACCGTTAAAAACTAATAA+TGG | - | chr1.4:795950-795969 | None:intergenic | 20.0% |
| !! | ATGTTTAACAAATTTGTATG+TGG | + | chr1.4:798617-798636 | MS.gene64008:intron | 20.0% |
| !! | CGTCAATATTATGAAATTAT+TGG | + | chr1.4:801326-801345 | MS.gene64008:intron | 20.0% |
| !! | GGGACATTATAATAAAAAAA+GGG | + | chr1.4:798353-798372 | MS.gene64008:intron | 20.0% |
| !! | GGTAAAAGAATAGAAAAATA+TGG | + | chr1.4:795012-795031 | MS.gene64008:intron | 20.0% |
| !! | GTAAAGTTTAAGTATACATA+TGG | - | chr1.4:801017-801036 | None:intergenic | 20.0% |
| !! | TATGTAATTGAAGTTTAGTT+TGG | + | chr1.4:795147-795166 | MS.gene64008:intron | 20.0% |
| !! | TGAATAGTGGTTTATTATAA+AGG | + | chr1.4:800761-800780 | MS.gene64008:intron | 20.0% |
| !! | TGGCTATTATATTATTGAAT+TGG | + | chr1.4:799083-799102 | MS.gene64008:intron | 20.0% |
| !! | TGGGACATTATAATAAAAAA+AGG | + | chr1.4:798352-798371 | MS.gene64008:intron | 20.0% |
| !! | TGTAATAAATTGTGTCAAAT+TGG | + | chr1.4:795981-796000 | MS.gene64008:intron | 20.0% |
| !! | TGTTATTAACATTACCTAAA+TGG | - | chr1.4:796221-796240 | None:intergenic | 20.0% |
| !! | TGTTTAACAAATTTGTATGT+GGG | + | chr1.4:798618-798637 | MS.gene64008:intron | 20.0% |
| !! | TGTTTGATCTCTTAAAAATT+TGG | - | chr1.4:800920-800939 | None:intergenic | 20.0% |
| !! | TTATTTATTGCAGAATTGTA+AGG | + | chr1.4:800152-800171 | MS.gene64008:intron | 20.0% |
| !! | TTCTATATGTTTGATATAGA+CGG | + | chr1.4:796486-796505 | MS.gene64008:intron | 20.0% |
| !!! | AAGAATTAAAATAGGTTTTC+TGG | + | chr1.4:798332-798351 | MS.gene64008:intron | 20.0% |
| !!! | AATGGTATATTTTATTTTGC+AGG | + | chr1.4:801475-801494 | MS.gene64008:intron | 20.0% |
| !!! | AGAATTAAAATAGGTTTTCT+GGG | + | chr1.4:798333-798352 | MS.gene64008:intron | 20.0% |
| !!! | AGAATTTTAAATTGATACAC+AGG | + | chr1.4:797937-797956 | MS.gene64008:intron | 20.0% |
| !!! | ATCTACATATTTGATTTTCA+AGG | - | chr1.4:797336-797355 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTCTTTTATGTTA+AGG | + | chr1.4:800821-800840 | MS.gene64008:intron | 20.0% |
| !!! | GAAAAATGAAAGCTTTAAAA+AGG | - | chr1.4:799764-799783 | None:intergenic | 20.0% |
| !!! | TTACTTCAACTTTTTTACAA+TGG | + | chr1.4:796965-796984 | MS.gene64008:intron | 20.0% |
| !!! | TTCATTTTTCAGAAATAGTT+TGG | + | chr1.4:799774-799793 | MS.gene64008:intron | 20.0% |
| !!! | TTCTTGAATTTTGTTTTTTG+GGG | + | chr1.4:798936-798955 | MS.gene64008:intron | 20.0% |
| !!! | TTGCCATTATTAGTTTTTAA+CGG | + | chr1.4:795944-795963 | MS.gene64008:intron | 20.0% |
| ! | AAAGATATTGTGACACAAAA+AGG | - | chr1.4:797617-797636 | None:intergenic | 25.0% |
| ! | AAGATATTGTGACACAAAAA+GGG | - | chr1.4:797616-797635 | None:intergenic | 25.0% |
| ! | AATGTTTATAGGTTTCTATC+GGG | + | chr1.4:799926-799945 | MS.gene64008:intron | 25.0% |
| ! | ACAATCTCTAAACAAATTTG+AGG | + | chr1.4:797505-797524 | MS.gene64008:intron | 25.0% |
| ! | AGAATAAGTTGTTTGGATAT+TGG | - | chr1.4:798920-798939 | None:intergenic | 25.0% |
| ! | AGTGTAAAACATTCCTTATA+AGG | + | chr1.4:796917-796936 | MS.gene64008:intron | 25.0% |
| ! | ATACACTATTCTACAAAAAG+AGG | + | chr1.4:797460-797479 | MS.gene64008:intron | 25.0% |
| ! | ATTAAGCAAAAAACAACACT+CGG | - | chr1.4:798547-798566 | None:intergenic | 25.0% |
| ! | ATTGAAAATATGATCATGCA+CGG | - | chr1.4:800790-800809 | None:intergenic | 25.0% |
| ! | CAATCTCTAAACAAATTTGA+GGG | + | chr1.4:797506-797525 | MS.gene64008:intron | 25.0% |
| ! | CTAACAGAAATAAATGCATA+TGG | - | chr1.4:797778-797797 | None:intergenic | 25.0% |
| ! | GATCAAAAGTTTATTGTTCT+GGG | + | chr1.4:800843-800862 | MS.gene64008:intron | 25.0% |
| ! | GTGTAAAACATTCCTTATAA+GGG | + | chr1.4:796918-796937 | MS.gene64008:intron | 25.0% |
| ! | GTTATAGCAATAGATAAAAG+AGG | - | chr1.4:795101-795120 | None:intergenic | 25.0% |
| ! | GTTTAACAAATTTGTATGTG+GGG | + | chr1.4:798619-798638 | MS.gene64008:intron | 25.0% |
| ! | TAAATGCCACCTTAAAAAAA+TGG | + | chr1.4:798853-798872 | MS.gene64008:intron | 25.0% |
| ! | TATAGTCTGAAAAATGTGAA+GGG | + | chr1.4:799047-799066 | MS.gene64008:intron | 25.0% |
| ! | TATTTATCACCAATATCTTC+AGG | + | chr1.4:800711-800730 | MS.gene64008:CDS | 25.0% |
| ! | TCTATATGTTTGATATAGAC+GGG | + | chr1.4:796487-796506 | MS.gene64008:intron | 25.0% |
| ! | TGAAACTGTTATAGAACATT+CGG | - | chr1.4:798163-798182 | None:intergenic | 25.0% |
| ! | TTAACTAAATGATTCATCAG+AGG | - | chr1.4:800038-800057 | None:intergenic | 25.0% |
| ! | TTATAGTCTGAAAAATGTGA+AGG | + | chr1.4:799046-799065 | MS.gene64008:intron | 25.0% |
| ! | TTCCATTCTTAACAATCTTT+GGG | + | chr1.4:799438-799457 | MS.gene64008:intron | 25.0% |
| ! | TTTCCATTCTTAACAATCTT+TGG | + | chr1.4:799437-799456 | MS.gene64008:intron | 25.0% |
| ! | TTTGTATGCAATTCATATCT+TGG | + | chr1.4:799553-799572 | MS.gene64008:CDS | 25.0% |
| !! | AAAAAAGGGAAGTTGATTTA+TGG | + | chr1.4:798367-798386 | MS.gene64008:intron | 25.0% |
| !! | ATCTAACGTTAATGTTTTAC+AGG | + | chr1.4:799523-799542 | MS.gene64008:intron | 25.0% |
| !! | ATTGGTGATAAATAGCAAAT+GGG | - | chr1.4:800705-800724 | None:intergenic | 25.0% |
| !! | TATTGGTGATAAATAGCAAA+TGG | - | chr1.4:800706-800725 | None:intergenic | 25.0% |
| !! | TCTATTCTTTTACCTATTAC+CGG | - | chr1.4:795006-795025 | None:intergenic | 25.0% |
| !! | TGTTTGGATTTTCAATGTTT+GGG | + | chr1.4:795324-795343 | MS.gene64008:intron | 25.0% |
| !! | TTAGATTTGAGCTATTCTTT+TGG | + | chr1.4:797794-797813 | MS.gene64008:intron | 25.0% |
| !! | TTGTTTGGATTTTCAATGTT+TGG | + | chr1.4:795323-795342 | MS.gene64008:intron | 25.0% |
| !! | TTTAGAGTGAAGATGTAATT+TGG | + | chr1.4:796787-796806 | MS.gene64008:intron | 25.0% |
| !! | TTTTGCTTTATGACAGAAAT+AGG | + | chr1.4:795685-795704 | MS.gene64008:intron | 25.0% |
| !!! | ATACACAGGCTTTAAAAAAA+AGG | + | chr1.4:797951-797970 | MS.gene64008:intron | 25.0% |
| !!! | CTCTATTTGATTTGATCTAA+AGG | - | chr1.4:798034-798053 | None:intergenic | 25.0% |
| !!! | GTAGCTTTGGTTATAAATTT+AGG | + | chr1.4:800865-800884 | MS.gene64008:intron | 25.0% |
| !!! | TAGCAGTTTCCATTTTTTTA+AGG | - | chr1.4:798865-798884 | None:intergenic | 25.0% |
| !!! | TATTTTTTCCAGTATATGTG+AGG | + | chr1.4:797708-797727 | MS.gene64008:intron | 25.0% |
| !!! | TGAAGTTTTGTTTCTTTTGT+CGG | + | chr1.4:800111-800130 | MS.gene64008:intron | 25.0% |
| !!! | TTAAGGCATCTTATTTTGTT+TGG | + | chr1.4:795308-795327 | MS.gene64008:intron | 25.0% |
| !!! | TTTTCAAGCTTAATGAATAG+TGG | + | chr1.4:800748-800767 | MS.gene64008:intron | 25.0% |
| AAAAAGGGAAAGTGAAATCA+AGG | - | chr1.4:797601-797620 | None:intergenic | 30.0% | |
| AAAAGGGAAAGTGAAATCAA+GGG | - | chr1.4:797600-797619 | None:intergenic | 30.0% | |
| AAATATCCTCACAATATCCA+TGG | - | chr1.4:799590-799609 | None:intergenic | 30.0% | |
| AACACTGAAGACATAAAAGA+TGG | + | chr1.4:796237-796256 | MS.gene64008:CDS | 30.0% | |
| AAGATGCTACATCTTGTATT+TGG | - | chr1.4:797083-797102 | None:intergenic | 30.0% | |
| AATTGAACACTGCTCAAATT+GGG | + | chr1.4:798396-798415 | MS.gene64008:intron | 30.0% | |
| ACATGCATTTGAGAAATATG+AGG | + | chr1.4:796076-796095 | MS.gene64008:CDS | 30.0% | |
| AGAAAAGAAATGTGAAGCTT+TGG | - | chr1.4:797303-797322 | None:intergenic | 30.0% | |
| AGGTTATCAGTGATTGATTA+CGG | + | chr1.4:796104-796123 | MS.gene64008:CDS | 30.0% | |
| ATACCTACTAATTCAACACA+TGG | - | chr1.4:799956-799975 | None:intergenic | 30.0% | |
| ATAGATAAAAGAGGAATGCT+AGG | - | chr1.4:795092-795111 | None:intergenic | 30.0% | |
| ATAGTCTGAAAAATGTGAAG+GGG | + | chr1.4:799048-799067 | MS.gene64008:intron | 30.0% | |
| ATGACAGAGTTGTATAATGT+CGG | + | chr1.4:798286-798305 | MS.gene64008:intron | 30.0% | |
| ATGACGTGTCTCATTATTAT+TGG | + | chr1.4:795035-795054 | MS.gene64008:intron | 30.0% | |
| ATTAGCCATTGAAAGTAGAA+GGG | - | chr1.4:799194-799213 | None:intergenic | 30.0% | |
| ATTATTTCCTTGGTATGCTT+GGG | + | chr1.4:796604-796623 | MS.gene64008:intron | 30.0% | |
| CAAAATCCAAAACATGATGA+CGG | + | chr1.4:800217-800236 | MS.gene64008:CDS | 30.0% | |
| CACGACATATGATAAATTGT+TGG | - | chr1.4:800311-800330 | None:intergenic | 30.0% | |
| CATGCATTTGAGAAATATGA+GGG | + | chr1.4:796077-796096 | MS.gene64008:CDS | 30.0% | |
| CCAAAATTACCTGAAGATAT+TGG | - | chr1.4:800723-800742 | None:intergenic | 30.0% | |
| CTGTCTAGTTATTATTTCCT+TGG | + | chr1.4:796594-796613 | MS.gene64008:intron | 30.0% | |
| CTTCTGAATTCGTTATTATC+TGG | + | chr1.4:798960-798979 | MS.gene64008:intron | 30.0% | |
| GAAAATGGAATTTCTGATCT+TGG | + | chr1.4:800388-800407 | MS.gene64008:CDS | 30.0% | |
| GACAAGAATAATTAAGTACC+TGG | - | chr1.4:801304-801323 | None:intergenic | 30.0% | |
| GACAATACCAAATAATCGAA+GGG | + | chr1.4:796994-797013 | MS.gene64008:intron | 30.0% | |
| GATATAGAGAGTAAACAACT+TGG | - | chr1.4:797113-797132 | None:intergenic | 30.0% | |
| GGATCAAAAGTTTATTGTTC+TGG | + | chr1.4:800842-800861 | MS.gene64008:intron | 30.0% | |
| GTTAGTTAGAAACCAATTCA+AGG | - | chr1.4:799134-799153 | None:intergenic | 30.0% | |
| TAAGAAAACTTCATTCTCAC+AGG | + | chr1.4:796725-796744 | MS.gene64008:CDS | 30.0% | |
| TAGAGAAAAATCTAGTGATG+AGG | + | chr1.4:798740-798759 | MS.gene64008:intron | 30.0% | |
| TAGATAAAAGAGGAATGCTA+GGG | - | chr1.4:795091-795110 | None:intergenic | 30.0% | |
| TATTATTTCCTTGGTATGCT+TGG | + | chr1.4:796603-796622 | MS.gene64008:intron | 30.0% | |
| TCAACAACAAAAGTGGAATT+GGG | - | chr1.4:798260-798279 | None:intergenic | 30.0% | |
| TCACATTAACAATGGTAGTA+TGG | - | chr1.4:796539-796558 | None:intergenic | 30.0% | |
| TCTCTTGAGATTCAATGAAA+AGG | + | chr1.4:796423-796442 | MS.gene64008:intron | 30.0% | |
| TGAATTCGTTATTATCTGGA+TGG | + | chr1.4:798964-798983 | MS.gene64008:intron | 30.0% | |
| TGACAATACCAAATAATCGA+AGG | + | chr1.4:796993-797012 | MS.gene64008:intron | 30.0% | |
| TGCAGAATTCACATTAACAA+TGG | - | chr1.4:796547-796566 | None:intergenic | 30.0% | |
| TGGATATTGGATAAAGTTTG+TGG | - | chr1.4:798907-798926 | None:intergenic | 30.0% | |
| TGTTCTGTATTTGTGTACTT+CGG | + | chr1.4:796463-796482 | MS.gene64008:intron | 30.0% | |
| TTATGCTATTCGATATATGC+AGG | + | chr1.4:796643-796662 | MS.gene64008:intron | 30.0% | |
| TTCAACAACAAAAGTGGAAT+TGG | - | chr1.4:798261-798280 | None:intergenic | 30.0% | |
| ! | ACAAGATGTAGCATCTTTTA+TGG | + | chr1.4:797086-797105 | MS.gene64008:intron | 30.0% |
| ! | ACATCTTACCCAATTTTCAA+TGG | - | chr1.4:797751-797770 | None:intergenic | 30.0% |
| ! | CCAATATCTTCAGGTAATTT+TGG | + | chr1.4:800720-800739 | MS.gene64008:intron | 30.0% |
| ! | GAACAGAAGCATAATCTATT+TGG | - | chr1.4:801149-801168 | None:intergenic | 30.0% |
| ! | GAGGATACTTCAATTTTGTA+TGG | - | chr1.4:800019-800038 | None:intergenic | 30.0% |
| ! | GATACTTCAATTTTGTATGG+TGG | - | chr1.4:800016-800035 | None:intergenic | 30.0% |
| ! | TTGGTGATAAATAGCAAATG+GGG | - | chr1.4:800704-800723 | None:intergenic | 30.0% |
| !! | AAGAAGCATCCATTGAAAAT+TGG | + | chr1.4:797739-797758 | MS.gene64008:CDS | 30.0% |
| !! | AGAAGCATCCATTGAAAATT+GGG | + | chr1.4:797740-797759 | MS.gene64008:CDS | 30.0% |
| !! | CTGGTTTTTGCTTTGATAAT+GGG | + | chr1.4:797402-797421 | MS.gene64008:intron | 30.0% |
| !!! | ACATAGTTTTGTGAGACTTT+GGG | + | chr1.4:795372-795391 | MS.gene64008:intron | 30.0% |
| !!! | CAGTTTCCATTTTTTTAAGG+TGG | - | chr1.4:798862-798881 | None:intergenic | 30.0% |
| !!! | GAAGTTTTGTTTCTTTTGTC+GGG | + | chr1.4:800112-800131 | MS.gene64008:intron | 30.0% |
| !!! | TCCACTTTTGTTGTTGAAAA+AGG | + | chr1.4:798263-798282 | MS.gene64008:intron | 30.0% |
| !!! | TCCTTTTTCAACAACAAAAG+TGG | - | chr1.4:798267-798286 | None:intergenic | 30.0% |
| !!! | TCTGGTTTTTGCTTTGATAA+TGG | + | chr1.4:797401-797420 | MS.gene64008:intron | 30.0% |
| !!! | TGAGGACATCTTATTTTGTT+TGG | + | chr1.4:796381-796400 | MS.gene64008:intron | 30.0% |
| !!! | TGATGCATGCTATTTTATAC+TGG | + | chr1.4:798434-798453 | MS.gene64008:intron | 30.0% |
| !!! | TTGAAAACGTTGATTTTGTG+TGG | + | chr1.4:798470-798489 | MS.gene64008:intron | 30.0% |
| AAAAAAAGTCTGCCTCTTTC+CGG | - | chr1.4:794928-794947 | None:intergenic | 35.0% | |
| AAAATCTACGTGATCATGGT+GGG | + | chr1.4:798803-798822 | MS.gene64008:intron | 35.0% | |
| AAATTTGTATGTGGGGTGAA+AGG | + | chr1.4:798626-798645 | MS.gene64008:intron | 35.0% | |
| AAGATATAGAAGACATGCGA+AGG | + | chr1.4:796358-796377 | MS.gene64008:CDS | 35.0% | |
| ACACATCTAATGCCCTTATA+AGG | - | chr1.4:796933-796952 | None:intergenic | 35.0% | |
| ACATCTTTAATGTCCGTATG+TGG | + | chr1.4:797853-797872 | MS.gene64008:intron | 35.0% | |
| ACGGTGATATTGTAAACGAT+GGG | - | chr1.4:798192-798211 | None:intergenic | 35.0% | |
| AGATGCCATACATGATATAC+AGG | - | chr1.4:799025-799044 | None:intergenic | 35.0% | |
| AGTTACAGAAAAGCAAGATG+TGG | - | chr1.4:796572-796591 | None:intergenic | 35.0% | |
| AGTTTGATAAAAGTGGCAAG+AGG | - | chr1.4:800678-800697 | None:intergenic | 35.0% | |
| ATCAGAGATTTGCACAGAAT+TGG | - | chr1.4:801447-801466 | None:intergenic | 35.0% | |
| ATCTCTCATTCGTCAGAAAA+TGG | + | chr1.4:800373-800392 | MS.gene64008:CDS | 35.0% | |
| ATGCAATTCATATCTTGGAC+AGG | + | chr1.4:799558-799577 | MS.gene64008:CDS | 35.0% | |
| ATTCTCGTTGTTGATATGGT+TGG | + | chr1.4:799232-799251 | MS.gene64008:CDS | 35.0% | |
| ATTGAACACTGCTCAAATTG+GGG | + | chr1.4:798397-798416 | MS.gene64008:intron | 35.0% | |
| ATTGTCCCTTCTACTTTCAA+TGG | + | chr1.4:799186-799205 | MS.gene64008:CDS | 35.0% | |
| CAATCTACAGCTTGAGAAAA+TGG | + | chr1.4:801238-801257 | MS.gene64008:CDS | 35.0% | |
| CACTTCCTTGATCTTCTAAT+CGG | + | chr1.4:800270-800289 | MS.gene64008:intron | 35.0% | |
| CATTAGCCATTGAAAGTAGA+AGG | - | chr1.4:799195-799214 | None:intergenic | 35.0% | |
| CATTTGAGAAATATGAGGGA+GGG | + | chr1.4:796081-796100 | MS.gene64008:CDS | 35.0% | |
| CTCAATTGTATAGACAGAAG+AGG | - | chr1.4:796845-796864 | None:intergenic | 35.0% | |
| CTTATCAAATGTTGCGCTAT+TGG | - | chr1.4:796709-796728 | None:intergenic | 35.0% | |
| GAAATAAGCCTCACATATAC+TGG | - | chr1.4:797719-797738 | None:intergenic | 35.0% | |
| GAATTGAACACTGCTCAAAT+TGG | + | chr1.4:798395-798414 | MS.gene64008:intron | 35.0% | |
| GACCCAAAGATTGTTAAGAA+TGG | - | chr1.4:799443-799462 | None:intergenic | 35.0% | |
| GGAAAAAAATCTAGTGGTGA+GGG | - | chr1.4:798076-798095 | None:intergenic | 35.0% | |
| GTCTCATTATTATTGGAGTG+TGG | + | chr1.4:795042-795061 | MS.gene64008:intron | 35.0% | |
| GTTTAACTATCATGTACTCC+TGG | + | chr1.4:801056-801075 | MS.gene64008:intron | 35.0% | |
| GTTTGGATCACTCTTTGTAT+TGG | + | chr1.4:799791-799810 | MS.gene64008:intron | 35.0% | |
| TAAAATCTACGTGATCATGG+TGG | + | chr1.4:798802-798821 | MS.gene64008:intron | 35.0% | |
| TAACAACCATAAGTCATCGA+GGG | - | chr1.4:797678-797697 | None:intergenic | 35.0% | |
| TACGGTGATATTGTAAACGA+TGG | - | chr1.4:798193-798212 | None:intergenic | 35.0% | |
| TAGAACCGATTAGAAGATCA+AGG | - | chr1.4:800278-800297 | None:intergenic | 35.0% | |
| TAGCCATGTGTTGAATTAGT+AGG | + | chr1.4:799950-799969 | MS.gene64008:intron | 35.0% | |
| TATTACTTCCCCATGCTAAA+TGG | - | chr1.4:797979-797998 | None:intergenic | 35.0% | |
| TATTATTGTCGATCAACGAC+CGG | - | chr1.4:796317-796336 | None:intergenic | 35.0% | |
| TCAAAAGACAGTCAACTTAC+CGG | + | chr1.4:796276-796295 | MS.gene64008:CDS | 35.0% | |
| TGACATTCTCGTTGTTGATA+TGG | + | chr1.4:799228-799247 | MS.gene64008:CDS | 35.0% | |
| TGTATAGCATGTGTAGGTTT+GGG | + | chr1.4:801083-801102 | MS.gene64008:intron | 35.0% | |
| TGTGTGGGAAAAAAATCTAG+TGG | - | chr1.4:798082-798101 | None:intergenic | 35.0% | |
| TGTGTTCTCTATTGACCTAA+TGG | + | chr1.4:798777-798796 | MS.gene64008:intron | 35.0% | |
| TTGGACCTGTATATCATGTA+TGG | + | chr1.4:799017-799036 | MS.gene64008:intron | 35.0% | |
| TTGTATAGCATGTGTAGGTT+TGG | + | chr1.4:801082-801101 | MS.gene64008:intron | 35.0% | |
| TTGTGACAACAAGTCAGAAA+TGG | - | chr1.4:800182-800201 | None:intergenic | 35.0% | |
| TTTCTCTTTCAGTGCATCAA+CGG | - | chr1.4:799734-799753 | None:intergenic | 35.0% | |
| ! | ATTGACTCTTGGAAGGAAAA+TGG | + | chr1.4:800505-800524 | MS.gene64008:CDS | 35.0% |
| ! | CACGTAGATTTTAGACCATT+AGG | - | chr1.4:798795-798814 | None:intergenic | 35.0% |
| ! | CTTCAATTTTGTATGGTGGT+TGG | - | chr1.4:800012-800031 | None:intergenic | 35.0% |
| ! | CTTCACATTTCTTTTCTCTG+AGG | + | chr1.4:797306-797325 | MS.gene64008:intron | 35.0% |
| ! | GATTTGAGCTATTCTTTTGG+AGG | + | chr1.4:797797-797816 | MS.gene64008:intron | 35.0% |
| ! | GATTTTTCCATGAATCCTTC+CGG | - | chr1.4:794879-794898 | None:intergenic | 35.0% |
| ! | GCTGATTTCATAAGCTATCT+TGG | - | chr1.4:795634-795653 | None:intergenic | 35.0% |
| ! | GGAAGGAAAATGGTTTTTCT+AGG | + | chr1.4:800515-800534 | MS.gene64008:CDS | 35.0% |
| ! | GGACGTCTTATAAGTACTTT+TGG | - | chr1.4:797207-797226 | None:intergenic | 35.0% |
| ! | GTCTAAAATCTACGTGATCA+TGG | + | chr1.4:798799-798818 | MS.gene64008:intron | 35.0% |
| ! | TATTCTACAAAAAGAGGTGC+AGG | + | chr1.4:797466-797485 | MS.gene64008:intron | 35.0% |
| ! | TGCATCTAGAGCTATTCATT+TGG | - | chr1.4:799859-799878 | None:intergenic | 35.0% |
| ! | TTTAAGGTGGCATTTAGCAT+GGG | - | chr1.4:798849-798868 | None:intergenic | 35.0% |
| ! | TTTATTGTTCTGGGTAGCTT+TGG | + | chr1.4:800852-800871 | MS.gene64008:intron | 35.0% |
| !! | AAAAAAGGTGCCATTTAGCA+TGG | + | chr1.4:797966-797985 | MS.gene64008:intron | 35.0% |
| !! | AAAAAGGTGCCATTTAGCAT+GGG | + | chr1.4:797967-797986 | MS.gene64008:intron | 35.0% |
| !! | AAGTTGACTGTCTTTTGACT+CGG | - | chr1.4:796274-796293 | None:intergenic | 35.0% |
| !! | AGAAATCATTGACTCTTGGA+AGG | + | chr1.4:800498-800517 | MS.gene64008:CDS | 35.0% |
| !! | CTCAAGAAATCATTGACTCT+TGG | + | chr1.4:800494-800513 | MS.gene64008:CDS | 35.0% |
| !! | TTATTTGTCTTTGGAGCATC+TGG | + | chr1.4:797383-797402 | MS.gene64008:intron | 35.0% |
| !!! | AGTGTTGGTTTTCATAGTTC+AGG | + | chr1.4:799474-799493 | MS.gene64008:intron | 35.0% |
| !!! | GACATAGTTTTGTGAGACTT+TGG | + | chr1.4:795371-795390 | MS.gene64008:intron | 35.0% |
| !!! | GTGTGGAAATTGCTGATTTT+AGG | + | chr1.4:798487-798506 | MS.gene64008:intron | 35.0% |
| !!! | GTTCACTTTTTGTTGCGTTT+TGG | + | chr1.4:798998-799017 | MS.gene64008:intron | 35.0% |
| !!! | TTTTAAGGTGGCATTTAGCA+TGG | - | chr1.4:798850-798869 | None:intergenic | 35.0% |
| AAATCTACGTGATCATGGTG+GGG | + | chr1.4:798804-798823 | MS.gene64008:intron | 40.0% | |
| AACAACCATAAGTCATCGAG+GGG | - | chr1.4:797677-797696 | None:intergenic | 40.0% | |
| AAGAGCCTGCAAAGCTATAA+AGG | + | chr1.4:800456-800475 | MS.gene64008:CDS | 40.0% | |
| AATGAACTATCGTAACCCCT+TGG | + | chr1.4:796011-796030 | MS.gene64008:intron | 40.0% | |
| AATGCACTCATTTGCATGCA+TGG | - | chr1.4:801521-801540 | None:intergenic | 40.0% | |
| AATGTCCAAGTATCCAAGTC+TGG | - | chr1.4:800646-800665 | None:intergenic | 40.0% | |
| AATTATTGCTGCACCAGACT+TGG | + | chr1.4:800630-800649 | MS.gene64008:CDS | 40.0% | |
| ACACATGCTATACAATCTCC+AGG | - | chr1.4:801077-801096 | None:intergenic | 40.0% | |
| AGTAATAAACTTCCCTGCCA+TGG | + | chr1.4:797992-798011 | MS.gene64008:intron | 40.0% | |
| AGTCTGGTGCAGCAATAATT+AGG | - | chr1.4:800630-800649 | None:intergenic | 40.0% | |
| ATCCTCACAATATCCATGGA+TGG | - | chr1.4:799586-799605 | None:intergenic | 40.0% | |
| ATCTTGTATTTGGATCCCTG+AGG | - | chr1.4:797073-797092 | None:intergenic | 40.0% | |
| ATGCAAATGAGTGCATTTGG+GGG | + | chr1.4:801524-801543 | MS.gene64008:CDS | 40.0% | |
| ATGCACTCATTTGCATGCAT+GGG | - | chr1.4:801520-801539 | None:intergenic | 40.0% | |
| CAATCCAAACAGACTGTATG+TGG | - | chr1.4:795175-795194 | None:intergenic | 40.0% | |
| CAGGAGCTAATACATGCATT+AGG | + | chr1.4:799493-799512 | MS.gene64008:intron | 40.0% | |
| CATGCAAATGAGTGCATTTG+GGG | + | chr1.4:801523-801542 | MS.gene64008:CDS | 40.0% | |
| CTATTCGATATATGCAGGCA+GGG | + | chr1.4:796648-796667 | MS.gene64008:intron | 40.0% | |
| CTCAGTTATTTGCAATCCGA+TGG | - | chr1.4:801264-801283 | None:intergenic | 40.0% | |
| CTTCTATATCTTCACCAGTG+AGG | - | chr1.4:796350-796369 | None:intergenic | 40.0% | |
| GAAGCTACAGTTAGAGTCAA+TGG | + | chr1.4:798659-798678 | MS.gene64008:intron | 40.0% | |
| GAGTTCACCCTTCGATTATT+TGG | - | chr1.4:797004-797023 | None:intergenic | 40.0% | |
| GATTGCAAATAACTGAGCCT+TGG | + | chr1.4:801267-801286 | MS.gene64008:CDS | 40.0% | |
| GCATGCAAATGAGTGCATTT+GGG | + | chr1.4:801522-801541 | MS.gene64008:CDS | 40.0% | |
| GCATTTGAGAAATATGAGGG+AGG | + | chr1.4:796080-796099 | MS.gene64008:CDS | 40.0% | |
| GGAGATTGTATAGCATGTGT+AGG | + | chr1.4:801077-801096 | MS.gene64008:intron | 40.0% | |
| GGGAAAAAAATCTAGTGGTG+AGG | - | chr1.4:798077-798096 | None:intergenic | 40.0% | |
| GTAACAACCATAAGTCATCG+AGG | - | chr1.4:797679-797698 | None:intergenic | 40.0% | |
| TCTTGTATTTGGATCCCTGA+GGG | - | chr1.4:797072-797091 | None:intergenic | 40.0% | |
| TGCATGCAAATGAGTGCATT+TGG | + | chr1.4:801521-801540 | MS.gene64008:CDS | 40.0% | |
| TGTCTATACAATTGAGCTCC+AGG | + | chr1.4:796849-796868 | MS.gene64008:intron | 40.0% | |
| ! | ACTGCTCAAATTGGGGTTTT+AGG | + | chr1.4:798404-798423 | MS.gene64008:intron | 40.0% |
| ! | CGTTAATGTTTTACAGGCAC+TGG | + | chr1.4:799529-799548 | MS.gene64008:intron | 40.0% |
| ! | CTGCTCAAATTGGGGTTTTA+GGG | + | chr1.4:798405-798424 | MS.gene64008:intron | 40.0% |
| ! | GATCACTCTTTGTATTGGCA+TGG | + | chr1.4:799796-799815 | MS.gene64008:intron | 40.0% |
| ! | TACATCTCGATCTGCCATTT+AGG | + | chr1.4:796204-796223 | MS.gene64008:intron | 40.0% |
| ! | TCTTTTCTCTGCACCACATA+CGG | - | chr1.4:797869-797888 | None:intergenic | 40.0% |
| ! | TGAACTAGTTGCTTTGCCAA+GGG | - | chr1.4:796030-796049 | None:intergenic | 40.0% |
| ! | TTGAACTAGTTGCTTTGCCA+AGG | - | chr1.4:796031-796050 | None:intergenic | 40.0% |
| !! | AAAAGGTGCCATTTAGCATG+GGG | + | chr1.4:797968-797987 | MS.gene64008:intron | 40.0% |
| !! | GGTCTAGTGATTGATAGTGT+TGG | + | chr1.4:799459-799478 | MS.gene64008:intron | 40.0% |
| AAAACCTACTTGACCATGGC+AGG | - | chr1.4:798008-798027 | None:intergenic | 45.0% | |
| AAACCTACTTGACCATGGCA+GGG | - | chr1.4:798007-798026 | None:intergenic | 45.0% | |
| AATGTGTGCATCAGTCAGCA+TGG | + | chr1.4:800345-800364 | MS.gene64008:CDS | 45.0% | |
| ACTATCACCAAATGCCGGAA+GGG | - | chr1.4:796892-796911 | None:intergenic | 45.0% | |
| ACTGAATCCCAAGCATACCA+AGG | - | chr1.4:796614-796633 | None:intergenic | 45.0% | |
| AGTATCCCCTCGATGACTTA+TGG | + | chr1.4:797669-797688 | MS.gene64008:intron | 45.0% | |
| ATAATGTCGGCAAAGCGTGT+GGG | + | chr1.4:798299-798318 | MS.gene64008:intron | 45.0% | |
| ATAGAAGACATGCGAAGGTG+AGG | + | chr1.4:796363-796382 | MS.gene64008:intron | 45.0% | |
| ATCTTCACCAGTGAGGCTTT+GGG | - | chr1.4:796343-796362 | None:intergenic | 45.0% | |
| ATGCATGGGTGAGTTCTTGA+TGG | - | chr1.4:801506-801525 | None:intergenic | 45.0% | |
| CACCATCCATGGATATTGTG+AGG | + | chr1.4:799581-799600 | MS.gene64008:CDS | 45.0% | |
| CAGCTTGAGAAAATGGCCAT+CGG | + | chr1.4:801245-801264 | MS.gene64008:CDS | 45.0% | |
| CTCGTTGTTGATATGGTTGG+TGG | + | chr1.4:799235-799254 | MS.gene64008:CDS | 45.0% | |
| CTGATTCAGATTCTTGCGTG+TGG | + | chr1.4:799159-799178 | MS.gene64008:intron | 45.0% | |
| GAAGCTCACTATATCTGTGC+AGG | + | chr1.4:797146-797165 | MS.gene64008:intron | 45.0% | |
| GAAGGGTGAACTCTTTAGCA+AGG | + | chr1.4:797011-797030 | MS.gene64008:intron | 45.0% | |
| GCCTAAAACCTACTTGACCA+TGG | - | chr1.4:798012-798031 | None:intergenic | 45.0% | |
| GCTATTCGATATATGCAGGC+AGG | + | chr1.4:796647-796666 | MS.gene64008:intron | 45.0% | |
| GGGGCAGAGTTTGATAAAAG+TGG | - | chr1.4:800685-800704 | None:intergenic | 45.0% | |
| GGTACCACATACAGTCTGTT+TGG | + | chr1.4:795168-795187 | MS.gene64008:intron | 45.0% | |
| TAAGCGACGAAATCTGCAAG+AGG | + | chr1.4:799614-799633 | MS.gene64008:CDS | 45.0% | |
| TATAATGTCGGCAAAGCGTG+TGG | + | chr1.4:798298-798317 | MS.gene64008:intron | 45.0% | |
| TATCTTCACCAGTGAGGCTT+TGG | - | chr1.4:796344-796363 | None:intergenic | 45.0% | |
| TGGTTTATGAGAAAACGCCG+AGG | + | chr1.4:798679-798698 | MS.gene64008:intron | 45.0% | |
| TGTGTAGACAGAAACCCTCA+GGG | + | chr1.4:797055-797074 | MS.gene64008:intron | 45.0% | |
| TTATGAGAAAACGCCGAGGT+GGG | + | chr1.4:798683-798702 | MS.gene64008:intron | 45.0% | |
| TTGAGAAATATGAGGGAGGG+AGG | + | chr1.4:796084-796103 | MS.gene64008:CDS | 45.0% | |
| TTGGGGGTTACATTCTCAGT+GGG | + | chr1.4:801540-801559 | MS.gene64008:CDS | 45.0% | |
| TTGTGCATGCAAGTTGCTAG+AGG | - | chr1.4:801221-801240 | None:intergenic | 45.0% | |
| TTGTGTAGACAGAAACCCTC+AGG | + | chr1.4:797054-797073 | MS.gene64008:intron | 45.0% | |
| TTTATGAGAAAACGCCGAGG+TGG | + | chr1.4:798682-798701 | MS.gene64008:intron | 45.0% | |
| TTTGGGGGTTACATTCTCAG+TGG | + | chr1.4:801539-801558 | MS.gene64008:CDS | 45.0% | |
| ! | ACACTGCCGTCATCATGTTT+TGG | - | chr1.4:800226-800245 | None:intergenic | 45.0% |
| ! | AGTGTGGCAAAGAGTGTGTA+GGG | + | chr1.4:795058-795077 | MS.gene64008:intron | 45.0% |
| ! | GAACTAGTTGCTTTGCCAAG+GGG | - | chr1.4:796029-796048 | None:intergenic | 45.0% |
| ! | GCCATGGTCAAGTAGGTTTT+AGG | + | chr1.4:798008-798027 | MS.gene64008:intron | 45.0% |
| ! | TCAACTTACCGGTGAGTTGA+GGG | + | chr1.4:796287-796306 | MS.gene64008:CDS | 45.0% |
| ! | TCCAGCCTTTATAGCTTTGC+AGG | - | chr1.4:800464-800483 | None:intergenic | 45.0% |
| ! | TTACCTATTACCGGTTGCAC+AGG | - | chr1.4:794997-795016 | None:intergenic | 45.0% |
| !! | AAAACATGATGACGGCAGTG+TGG | + | chr1.4:800225-800244 | MS.gene64008:CDS | 45.0% |
| !! | AATGGTGGTGGAAGATGTGT+GGG | - | chr1.4:798097-798116 | None:intergenic | 45.0% |
| AAAGGTCACCTTCGAGCAAC+AGG | - | chr1.4:797228-797247 | None:intergenic | 50.0% | |
| AATACTGCCCAAAGCCTCAC+TGG | + | chr1.4:796333-796352 | MS.gene64008:CDS | 50.0% | |
| AGTATGGAGAGACCGGAAAG+AGG | + | chr1.4:794913-794932 | MS.gene64008:intron | 50.0% | |
| CAACCTGTGCAACCGGTAAT+AGG | + | chr1.4:794991-795010 | MS.gene64008:intron | 50.0% | |
| CACTATCACCAAATGCCGGA+AGG | - | chr1.4:796893-796912 | None:intergenic | 50.0% | |
| CCTTCTTTCAGAACACGGGT+GGG | - | chr1.4:798124-798143 | None:intergenic | 50.0% | |
| CGCTCACTATCACCAAATGC+CGG | - | chr1.4:796897-796916 | None:intergenic | 50.0% | |
| CGTCCCTTCTTTCAGAACAC+GGG | - | chr1.4:798128-798147 | None:intergenic | 50.0% | |
| CTGCACCAGACTTGGATACT+TGG | + | chr1.4:800638-800657 | MS.gene64008:CDS | 50.0% | |
| CTTCAGACCGGAAGGATTCA+TGG | + | chr1.4:794869-794888 | MS.gene64008:CDS | 50.0% | |
| CTTCTTTCAGAACACGGGTG+GGG | - | chr1.4:798123-798142 | None:intergenic | 50.0% | |
| GCCTGCAAAGCTATAAAGGC+TGG | + | chr1.4:800460-800479 | MS.gene64008:CDS | 50.0% | |
| GCGTCCCTTCTTTCAGAACA+CGG | - | chr1.4:798129-798148 | None:intergenic | 50.0% | |
| GGAAAAATCCGAAGACGCCA+TGG | + | chr1.4:794890-794909 | MS.gene64008:CDS | 50.0% | |
| GGCTCTTAGAGCAGGAAATG+TGG | - | chr1.4:800443-800462 | None:intergenic | 50.0% | |
| GGGTGAACTCTTTAGCAAGG+CGG | + | chr1.4:797014-797033 | MS.gene64008:intron | 50.0% | |
| GTCAACTTACCGGTGAGTTG+AGG | + | chr1.4:796286-796305 | MS.gene64008:CDS | 50.0% | |
| TAAGACGTCCTGTTGCTCGA+AGG | + | chr1.4:797217-797236 | MS.gene64008:CDS | 50.0% | |
| TACTCGCACTCTAACCAGCA+CGG | + | chr1.4:796181-796200 | MS.gene64008:intron | 50.0% | |
| TATGAGAAAACGCCGAGGTG+GGG | + | chr1.4:798684-798703 | MS.gene64008:intron | 50.0% | |
| TCCATACTCCATGGCGTCTT+CGG | - | chr1.4:794901-794920 | None:intergenic | 50.0% | |
| TCCATAGCAACCTGTGCAAC+CGG | + | chr1.4:794984-795003 | MS.gene64008:intron | 50.0% | |
| TGCTAACAAGTCCACCCTTC+CGG | + | chr1.4:796875-796894 | MS.gene64008:intron | 50.0% | |
| TTCTTTCAGAACACGGGTGG+GGG | - | chr1.4:798122-798141 | None:intergenic | 50.0% | |
| ! | AGAGTTTGCTTCAGACCGGA+AGG | + | chr1.4:794861-794880 | MS.gene64008:CDS | 50.0% |
| ! | ATATGCAGGCAGGGTGCTAA+GGG | + | chr1.4:796657-796676 | MS.gene64008:intron | 50.0% |
| ! | CGAGTAAAAGCGAAGAGTGC+AGG | - | chr1.4:796167-796186 | None:intergenic | 50.0% |
| ! | CGCTAGAGTTTGCTTCAGAC+CGG | + | chr1.4:794857-794876 | MS.gene64008:CDS | 50.0% |
| ! | GAGTGTGGCAAAGAGTGTGT+AGG | + | chr1.4:795057-795076 | MS.gene64008:intron | 50.0% |
| ! | TACGTGATCATGGTGGGGAA+GGG | + | chr1.4:798809-798828 | MS.gene64008:intron | 50.0% |
| ! | TATATGCAGGCAGGGTGCTA+AGG | + | chr1.4:796656-796675 | MS.gene64008:intron | 50.0% |
| !! | ATGGTTGGTGGCCTTCTTAC+TGG | + | chr1.4:799247-799266 | MS.gene64008:CDS | 50.0% |
| !! | CCACCCGTGTTCTGAAAGAA+GGG | + | chr1.4:798122-798141 | MS.gene64008:intron | 50.0% |
| !! | GAATGGTGGTGGAAGATGTG+TGG | - | chr1.4:798098-798117 | None:intergenic | 50.0% |
| !! | GTGGACTTGTTAGCAAGTCC+TGG | - | chr1.4:796870-796889 | None:intergenic | 50.0% |
| !!! | GACTGTCTTTTGACTCGGCT+TGG | - | chr1.4:796269-796288 | None:intergenic | 50.0% |
| AAGTCCACCCTTCCGGCATT+TGG | + | chr1.4:796882-796901 | MS.gene64008:intron | 55.0% | |
| ACCGGTTGCACAGGTTGCTA+TGG | - | chr1.4:794988-795007 | None:intergenic | 55.0% | |
| ACCTGGTATTCGCGTAGCCA+AGG | - | chr1.4:801287-801306 | None:intergenic | 55.0% | |
| ATCACCAAATGCCGGAAGGG+TGG | - | chr1.4:796889-796908 | None:intergenic | 55.0% | |
| ATGAGAAAACGCCGAGGTGG+GGG | + | chr1.4:798685-798704 | MS.gene64008:intron | 55.0% | |
| CAGATCGAGATGTACCGTGC+TGG | - | chr1.4:796198-796217 | None:intergenic | 55.0% | |
| CCCTTCTTTCAGAACACGGG+TGG | - | chr1.4:798125-798144 | None:intergenic | 55.0% | |
| CTCTAGCGAGTTTACTCGCG+AGG | - | chr1.4:794845-794864 | None:intergenic | 55.0% | |
| CTGCCACTGCACCAGTAAGA+AGG | - | chr1.4:799261-799280 | None:intergenic | 55.0% | |
| CTTCCCTGCCATGGTCAAGT+AGG | + | chr1.4:798001-798020 | MS.gene64008:intron | 55.0% | |
| CTTTAGCAAGGCGGCAACTC+TGG | + | chr1.4:797023-797042 | MS.gene64008:intron | 55.0% | |
| GCCATGGAGTATGGAGAGAC+CGG | + | chr1.4:794906-794925 | MS.gene64008:intron | 55.0% | |
| GCTTTGCAGGCTCTTAGAGC+AGG | - | chr1.4:800451-800470 | None:intergenic | 55.0% | |
| GGAGAATGTAGGGTGGATGG+TGG | + | chr1.4:798706-798725 | MS.gene64008:intron | 55.0% | |
| GTGTGCATCAGTCAGCATGG+AGG | + | chr1.4:800348-800367 | MS.gene64008:CDS | 55.0% | |
| TCCGAAGACGCCATGGAGTA+TGG | + | chr1.4:794897-794916 | MS.gene64008:intron | 55.0% | |
| TCCGGTCTCTCCATACTCCA+TGG | - | chr1.4:794910-794929 | None:intergenic | 55.0% | |
| TCTTGGACAGGCACCATCCA+TGG | + | chr1.4:799570-799589 | MS.gene64008:CDS | 55.0% | |
| TGGCCTTCTTACTGGTGCAG+TGG | + | chr1.4:799255-799274 | MS.gene64008:CDS | 55.0% | |
| ! | CTACGTGATCATGGTGGGGA+AGG | + | chr1.4:798808-798827 | MS.gene64008:intron | 55.0% |
| !! | CCCACCCGTGTTCTGAAAGA+AGG | + | chr1.4:798121-798140 | MS.gene64008:intron | 55.0% |
| AGAACACGGGTGGGGGAGAA+TGG | - | chr1.4:798115-798134 | None:intergenic | 60.0% | |
| AGGTGGGGGAGAATGTAGGG+TGG | + | chr1.4:798699-798718 | MS.gene64008:intron | 60.0% | |
| CCCTACATTCTCCCCCACCT+CGG | - | chr1.4:798699-798718 | None:intergenic | 60.0% | |
| CCGAGGTGGGGGAGAATGTA+GGG | + | chr1.4:798696-798715 | MS.gene64008:intron | 60.0% | |
| CCGGTTGTCCCTCAACTCAC+CGG | - | chr1.4:796298-796317 | None:intergenic | 60.0% | |
| GCCTTGGCTACGCGAATACC+AGG | + | chr1.4:801283-801302 | MS.gene64008:CDS | 60.0% | |
| GGGGGAGAATGTAGGGTGGA+TGG | + | chr1.4:798703-798722 | MS.gene64008:intron | 60.0% | |
| GTCGGCAAAGCGTGTGGGTA+AGG | + | chr1.4:798304-798323 | MS.gene64008:intron | 60.0% | |
| ! | CCGGTGAGTTGAGGGACAAC+CGG | + | chr1.4:796295-796314 | MS.gene64008:CDS | 60.0% |
| ! | GCAGTGGCAGAGCGTTTAGG+AGG | + | chr1.4:799271-799290 | MS.gene64008:CDS | 60.0% |
| ! | GGTGCAGTGGCAGAGCGTTT+AGG | + | chr1.4:799268-799287 | MS.gene64008:CDS | 60.0% |
| ! | TGAAGGGGTGTGTGCGTGTG+TGG | + | chr1.4:799063-799082 | MS.gene64008:intron | 60.0% |
| ACACGGGTGGGGGAGAATGG+TGG | - | chr1.4:798112-798131 | None:intergenic | 65.0% | |
| GCCGAGGTGGGGGAGAATGT+AGG | + | chr1.4:798695-798714 | MS.gene64008:intron | 65.0% | |
| CGGGTGGGGGAGAATGGTGG+TGG | - | chr1.4:798109-798128 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 794828 | 801583 | 794828 | ID=MS.gene64008 |
| chr1.4 | mRNA | 794828 | 801583 | 794828 | ID=MS.gene64008.t1;Parent=MS.gene64008 |
| chr1.4 | exon | 794828 | 794913 | 794828 | ID=MS.gene64008.t1.exon1;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 794828 | 794913 | 794828 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 796067 | 796146 | 796067 | ID=MS.gene64008.t1.exon2;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 796067 | 796146 | 796067 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 796226 | 796379 | 796226 | ID=MS.gene64008.t1.exon3;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 796226 | 796379 | 796226 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 796665 | 796746 | 796665 | ID=MS.gene64008.t1.exon4;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 796665 | 796746 | 796665 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 797168 | 797238 | 797168 | ID=MS.gene64008.t1.exon5;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 797168 | 797238 | 797168 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 797720 | 797761 | 797720 | ID=MS.gene64008.t1.exon6;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 797720 | 797761 | 797720 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 799168 | 799292 | 799168 | ID=MS.gene64008.t1.exon7;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 799168 | 799292 | 799168 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 799545 | 799635 | 799545 | ID=MS.gene64008.t1.exon8;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 799545 | 799635 | 799545 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 800165 | 800261 | 800165 | ID=MS.gene64008.t1.exon9;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 800165 | 800261 | 800165 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 800340 | 800536 | 800340 | ID=MS.gene64008.t1.exon10;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 800340 | 800536 | 800340 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 800627 | 800732 | 800627 | ID=MS.gene64008.t1.exon11;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 800627 | 800732 | 800627 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 801218 | 801304 | 801218 | ID=MS.gene64008.t1.exon12;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 801218 | 801304 | 801218 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| chr1.4 | exon | 801497 | 801583 | 801497 | ID=MS.gene64008.t1.exon13;Parent=MS.gene64008.t1 |
| chr1.4 | CDS | 801497 | 801583 | 801497 | ID=cds.MS.gene64008.t1;Parent=MS.gene64008.t1 |
| Gene Sequence |
| Protein sequence |