Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027187.t1 | XP_003589467.1 | 89.1 | 457 | 50 | 0 | 1 | 457 | 1 | 457 | 3.30E-228 | 800.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027187.t1 | Q54UB1 | 31.3 | 444 | 269 | 5 | 14 | 454 | 37 | 447 | 8.3e-55 | 216.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027187.t1 | G7I755 | 89.1 | 457 | 50 | 0 | 1 | 457 | 1 | 457 | 2.3e-228 | 800.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027187 | MS.gene059414 | PPI |
| MS.gene027187 | MS.gene066758 | PPI |
| MS.gene027187 | MS.gene047362 | PPI |
| MS.gene027187 | MS.gene004176 | PPI |
| MS.gene054179 | MS.gene027187 | PPI |
| MS.gene027187 | MS.gene99758 | PPI |
| MS.gene027187 | MS.gene01479 | PPI |
| MS.gene027187 | MS.gene054180 | PPI |
| MS.gene77102 | MS.gene027187 | PPI |
| MS.gene027187 | MS.gene002506 | PPI |
| MS.gene027187 | MS.gene30726 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027187.t1 | MTR_1g024920 | 95.842 | 457 | 19 | 0 | 1 | 457 | 1 | 457 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027187.t1 | AT2G45730 | 62.306 | 451 | 141 | 5 | 10 | 457 | 22 | 446 | 0.0 | 517 |
Find 100 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTATCCATTGAAAAT+TGG | 0.166239 | 3.4:+46790205 | MS.gene027187:CDS |
| ATGGTTGGTGGCCTTCTTAC+TGG | 0.198600 | 3.4:+46790797 | MS.gene027187:CDS |
| CAATGGATACTTCTTGAAAT+AGG | 0.217844 | 3.4:-46790197 | None:intergenic |
| TCCAGCCTTTATAGCTTTGC+AGG | 0.222527 | 3.4:-46792038 | None:intergenic |
| ATCTCTCATTCGTCAGAAAA+TGG | 0.252753 | 3.4:+46791950 | MS.gene027187:CDS |
| TGTATCAAATGTTGCACTAT+TGG | 0.253604 | 3.4:-46789145 | None:intergenic |
| AAGTGCAATTTACATTTAAT+TGG | 0.259398 | 3.4:-46791817 | None:intergenic |
| ATTGACTCGTGGAAGGAAAA+TGG | 0.273917 | 3.4:+46792082 | MS.gene027187:CDS |
| TTTGTATGCAATTCATATCT+TGG | 0.278999 | 3.4:+46791095 | MS.gene027187:CDS |
| CAATCTACAGCTTGAGAAAA+TGG | 0.282349 | 3.4:+46792808 | MS.gene027187:CDS |
| GAAAATGGAATTTCTGATCT+TGG | 0.300851 | 3.4:+46791965 | MS.gene027187:CDS |
| TATCTTCACCAGTGAGGCTT+TGG | 0.305154 | 3.4:-46788785 | None:intergenic |
| CGTTAGCCATTGAAAGTAGA+AGG | 0.321154 | 3.4:-46790742 | None:intergenic |
| TGACATTCTCGTTGTTGATA+TGG | 0.336210 | 3.4:+46790778 | MS.gene027187:CDS |
| AAGAGCCTGCAAAGCTATAA+AGG | 0.342065 | 3.4:+46792033 | MS.gene027187:CDS |
| CTAATACCTTTGGGTTGAAA+TGG | 0.345383 | 3.4:-46787640 | None:intergenic |
| TTCTGAATTGTTGTCACAAA+AGG | 0.352491 | 3.4:+46791748 | MS.gene027187:CDS |
| AGAAGTATCCATTGAAAATT+GGG | 0.361508 | 3.4:+46790206 | MS.gene027187:CDS |
| CTGCACCAGACTTGGATACT+TGG | 0.382708 | 3.4:+46792211 | MS.gene027187:CDS |
| GGACGTCTCATAAGTACTTT+TGG | 0.387747 | 3.4:-46789616 | None:intergenic |
| ATCTTCACCAGTGAGGCTTT+GGG | 0.389493 | 3.4:-46788784 | None:intergenic |
| ACACCGCCGTCATCATGTTT+CGG | 0.399115 | 3.4:-46791788 | None:intergenic |
| GGTGCTGTGGCAGAGCGTTT+AGG | 0.400582 | 3.4:+46790818 | MS.gene027187:CDS |
| TATTTATCACCAATATCTTC+AGG | 0.407320 | 3.4:+46792284 | MS.gene027187:CDS |
| AATTGCAGAAAATTGAAGAT+TGG | 0.413722 | 3.4:+46787523 | MS.gene027187:intron |
| ATTGTCCCTTCTACTTTCAA+TGG | 0.417484 | 3.4:+46790736 | MS.gene027187:CDS |
| AAAGGTCACCTTCGAGCAAC+AGG | 0.421884 | 3.4:-46789637 | None:intergenic |
| TATTGGTGATAAATAGCAAA+TGG | 0.425158 | 3.4:-46792276 | None:intergenic |
| TTATTTATTGCAGAATTGTA+AGG | 0.438615 | 3.4:+46791717 | MS.gene027187:intron |
| AGACTTGGATACTTGGACAT+TGG | 0.439819 | 3.4:+46792218 | MS.gene027187:CDS |
| ATTGGTGATAAATAGCAAAT+GGG | 0.443406 | 3.4:-46792275 | None:intergenic |
| AGCTATAAAGGCTGGAGAAA+AGG | 0.443779 | 3.4:+46792045 | MS.gene027187:CDS |
| GCCTGCAAAGCTATAAAGGC+TGG | 0.451952 | 3.4:+46792037 | MS.gene027187:CDS |
| TTGTGACAACAATTCAGAAA+TGG | 0.460444 | 3.4:-46791744 | None:intergenic |
| CCACTGATCGGTTGTCCATT+CGG | 0.467564 | 3.4:+46787568 | MS.gene027187:CDS |
| AATTATTGCTGCACCAGACT+TGG | 0.479316 | 3.4:+46792203 | MS.gene027187:CDS |
| TATATGCAGGCAGGGTGCTA+AGG | 0.479379 | 3.4:+46789095 | MS.gene027187:intron |
| TGCATGCAAATAAGTGCATT+TGG | 0.484955 | 3.4:+46793085 | MS.gene027187:CDS |
| CTGGTGAGTTGAGGGACAAC+CGG | 0.488388 | 3.4:+46788739 | MS.gene027187:CDS |
| CTCGTTGTTGATATGGTTGG+TGG | 0.492274 | 3.4:+46790785 | MS.gene027187:CDS |
| CAACTCGACACTTCTCCCGA+TGG | 0.501044 | 3.4:+46787601 | MS.gene027187:CDS |
| ATGCATGGGTGAGTTCTTGA+TGG | 0.501143 | 3.4:-46793067 | None:intergenic |
| GGGGCAGAGTTTGATAAAAG+TGG | 0.504966 | 3.4:-46792255 | None:intergenic |
| AGAAAAGAAACTGACGCTGC+AGG | 0.507723 | 3.4:-46787435 | None:intergenic |
| AATACTGCCCAAAGCCTCAC+TGG | 0.508455 | 3.4:+46788777 | MS.gene027187:CDS |
| CTGCCACAGCACCAGTAAGA+AGG | 0.510669 | 3.4:-46790808 | None:intergenic |
| AATGTCCAAGTATCCAAGTC+TGG | 0.512151 | 3.4:-46792216 | None:intergenic |
| GGTTGAAATGGAGATAGAAA+AGG | 0.517330 | 3.4:-46787628 | None:intergenic |
| CTCTGTTATTTGCAATCCAA+TGG | 0.519916 | 3.4:-46792831 | None:intergenic |
| TCAACTCACTGGTGAGTTGA+GGG | 0.520736 | 3.4:+46788731 | MS.gene027187:CDS |
| GATAGAAAAGGAGCACCATC+GGG | 0.523151 | 3.4:-46787616 | None:intergenic |
| CTATCTCCATTTCAACCCAA+AGG | 0.529076 | 3.4:+46787634 | MS.gene027187:CDS |
| TCTTGGACAGGCACCATCCA+TGG | 0.531216 | 3.4:+46791112 | MS.gene027187:CDS |
| ATGCAATTCATATCTTGGAC+AGG | 0.532059 | 3.4:+46791100 | MS.gene027187:CDS |
| GCCTTGGCTACGTGAATACC+AGG | 0.532354 | 3.4:+46792853 | MS.gene027187:CDS |
| CAGCTTGAGAAAATGGCCAT+TGG | 0.533840 | 3.4:+46792815 | MS.gene027187:CDS |
| ATTCTCGTTGTTGATATGGT+TGG | 0.536995 | 3.4:+46790782 | MS.gene027187:CDS |
| TTCCAAGCCGAGTCAAAAGA+TGG | 0.538940 | 3.4:+46788708 | MS.gene027187:CDS |
| AACACTGAAGAAATAAAAGA+TGG | 0.541792 | 3.4:+46788681 | MS.gene027187:CDS |
| ATATGCAGGCAGGGTGCTAA+GGG | 0.541866 | 3.4:+46789096 | MS.gene027187:intron |
| GATTGCAAATAACAGAGCCT+TGG | 0.542512 | 3.4:+46792837 | MS.gene027187:CDS |
| GCTTTGCAGGCTCTTAGAGC+AGG | 0.543207 | 3.4:-46792025 | None:intergenic |
| AATGCACTTATTTGCATGCA+TGG | 0.543512 | 3.4:-46793082 | None:intergenic |
| TCAAAAGATGGTCAACTCAC+TGG | 0.544032 | 3.4:+46788720 | MS.gene027187:CDS |
| GTCAACTCACTGGTGAGTTG+AGG | 0.545293 | 3.4:+46788730 | MS.gene027187:CDS |
| AGATAGAAAAGGAGCACCAT+CGG | 0.548161 | 3.4:-46787617 | None:intergenic |
| ACAATAAGAAAAGAGTTACA+TGG | 0.552508 | 3.4:+46787349 | MS.gene027187:CDS |
| AAATATCCTCACAATATCCA+TGG | 0.553785 | 3.4:-46791129 | None:intergenic |
| TAAGTGACGAAATCTGCAAA+AGG | 0.554822 | 3.4:+46791156 | MS.gene027187:CDS |
| CTCAAGAAATCATTGACTCG+TGG | 0.573979 | 3.4:+46792071 | MS.gene027187:CDS |
| AAGAAAAGAGTTACATGGGA+AGG | 0.576519 | 3.4:+46787354 | MS.gene027187:CDS |
| GGCTCTTAGAGCAGGAAATG+TGG | 0.580777 | 3.4:-46792017 | None:intergenic |
| TTGGTGGTTACATTCTCAGT+GGG | 0.584461 | 3.4:+46793104 | MS.gene027187:CDS |
| AGAAATCATTGACTCGTGGA+AGG | 0.586169 | 3.4:+46792075 | MS.gene027187:CDS |
| TGCTCACTACAGCCACTGAT+CGG | 0.591407 | 3.4:+46787556 | MS.gene027187:CDS |
| TGGCCTTCTTACTGGTGCTG+TGG | 0.592640 | 3.4:+46790805 | MS.gene027187:CDS |
| ATGCACTTATTTGCATGCAT+GGG | 0.599304 | 3.4:-46793081 | None:intergenic |
| TATTATTGTCGATCAACGAC+CGG | 0.599829 | 3.4:-46788758 | None:intergenic |
| TTTGGTGGTTACATTCTCAG+TGG | 0.601085 | 3.4:+46793103 | MS.gene027187:CDS |
| ATCCTCACAATATCCATGGA+TGG | 0.603371 | 3.4:-46791125 | None:intergenic |
| ACCTGGTATTCACGTAGCCA+AGG | 0.606267 | 3.4:-46792854 | None:intergenic |
| GAAACATGATGACGGCGGTG+TGG | 0.610162 | 3.4:+46791790 | MS.gene027187:CDS |
| TTGTGCATGCACGTTGCTAG+AGG | 0.610249 | 3.4:-46792788 | None:intergenic |
| CTAATTCAGATTCTTGCGTG+TGG | 0.610376 | 3.4:+46790709 | MS.gene027187:intron |
| CAATAAGAAAAGAGTTACAT+GGG | 0.610785 | 3.4:+46787350 | MS.gene027187:CDS |
| AATATGTGCATCAGTCAGCA+TGG | 0.624090 | 3.4:+46791922 | MS.gene027187:CDS |
| CACCATCCATGGATATTGTG+AGG | 0.625248 | 3.4:+46791123 | MS.gene027187:CDS |
| AGTTTGATAAAAGTGGTAAG+AGG | 0.632055 | 3.4:-46792248 | None:intergenic |
| AAGATATAGAAGACATGCGA+AGG | 0.637003 | 3.4:+46788802 | MS.gene027187:CDS |
| GTTAGCCATTGAAAGTAGAA+GGG | 0.644218 | 3.4:-46790741 | None:intergenic |
| TGAGACGTCCTGTTGCTCGA+AGG | 0.645575 | 3.4:+46789629 | MS.gene027187:CDS |
| TTGGTGATAAATAGCAAATG+GGG | 0.648921 | 3.4:-46792274 | None:intergenic |
| CAAAATCCGAAACATGATGA+CGG | 0.657397 | 3.4:+46791782 | MS.gene027187:CDS |
| CCGAATGGACAACCGATCAG+TGG | 0.661694 | 3.4:-46787568 | None:intergenic |
| CTTCTATATCTTCACCAGTG+AGG | 0.664706 | 3.4:-46788791 | None:intergenic |
| ATGCAAATAAGTGCATTTGG+TGG | 0.667615 | 3.4:+46793088 | MS.gene027187:CDS |
| GTCTTGCTTGATATCAACGA+TGG | 0.678428 | 3.4:+46787384 | MS.gene027187:CDS |
| GCTGTGGCAGAGCGTTTAGG+AGG | 0.683534 | 3.4:+46790821 | MS.gene027187:CDS |
| ATGTGCATCAGTCAGCATGG+AGG | 0.746880 | 3.4:+46791925 | MS.gene027187:CDS |
| AATCCGAAACATGATGACGG+CGG | 0.747356 | 3.4:+46791785 | MS.gene027187:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATATTTTATATGTCTT+TGG | + | chr3.4:46789849-46789868 | MS.gene027187:intron | 10.0% |
| !!! | TTTTAACCTAAAAAAATAAT+TGG | - | chr3.4:46791209-46791228 | None:intergenic | 10.0% |
| !! | AAAAAAAAATTCAAACCAAA+AGG | - | chr3.4:46790015-46790034 | None:intergenic | 15.0% |
| !! | AGAAATATGGTATATTATAA+AGG | + | chr3.4:46787981-46788000 | MS.gene027187:intron | 15.0% |
| !! | CAATAATAACAGAAAAATAA+AGG | - | chr3.4:46789658-46789677 | None:intergenic | 15.0% |
| !! | GAAATATGGTATATTATAAA+GGG | + | chr3.4:46787982-46788001 | MS.gene027187:intron | 15.0% |
| !! | GATATAAATTTAAACTTAGT+TGG | + | chr3.4:46790847-46790866 | MS.gene027187:intron | 15.0% |
| !! | TAAAGATGTATTTATTTATC+TGG | - | chr3.4:46788953-46788972 | None:intergenic | 15.0% |
| !! | TAATCATATATTTCTTATTC+AGG | + | chr3.4:46793039-46793058 | MS.gene027187:intron | 15.0% |
| !! | TATAATTTCTTTCTATGTTT+GGG | + | chr3.4:46789043-46789062 | MS.gene027187:intron | 15.0% |
| !! | TATATATATCTTAGAACTTT+GGG | - | chr3.4:46788203-46788222 | None:intergenic | 15.0% |
| !! | TTAAAAGTTAGATAGAAATA+TGG | + | chr3.4:46787968-46787987 | MS.gene027187:intron | 15.0% |
| !! | TTAAATAAAGAAGAAAATTG+AGG | - | chr3.4:46787468-46787487 | None:intergenic | 15.0% |
| !! | TTATAATTTCTTTCTATGTT+TGG | + | chr3.4:46789042-46789061 | MS.gene027187:intron | 15.0% |
| !! | TTATATATATCTTAGAACTT+TGG | - | chr3.4:46788204-46788223 | None:intergenic | 15.0% |
| !!! | ATTCTTGATTTTTGTTTTTT+GGG | + | chr3.4:46790492-46790511 | MS.gene027187:intron | 15.0% |
| !!! | ATTTTGCTACTTTTTTAATA+TGG | + | chr3.4:46790878-46790897 | MS.gene027187:intron | 15.0% |
| !!! | GAAAAATAAAAGCTTTAAAA+AGG | - | chr3.4:46791305-46791324 | None:intergenic | 15.0% |
| !!! | TATTCTTGATTTTTGTTTTT+TGG | + | chr3.4:46790491-46790510 | MS.gene027187:intron | 15.0% |
| !!! | TATTTACAAAAGTACATAAA+GGG | + | chr3.4:46792928-46792947 | MS.gene027187:intron | 15.0% |
| !!! | TGAGTTTTTCTTTTATAATT+TGG | + | chr3.4:46792173-46792192 | MS.gene027187:intron | 15.0% |
| !!! | TTATGTACTTTTGTAAATAA+AGG | - | chr3.4:46792927-46792946 | None:intergenic | 15.0% |
| !!! | TTATTTACAAAAGTACATAA+AGG | + | chr3.4:46792927-46792946 | MS.gene027187:intron | 15.0% |
| !!! | TTTATTTTTCAGAAATAGTT+TGG | + | chr3.4:46791315-46791334 | MS.gene027187:intron | 15.0% |
| !!! | TTTTATAATATATATAGCTC+AGG | + | chr3.4:46791433-46791452 | MS.gene027187:intron | 15.0% |
| !! | AAAGATATTGTAACACAAAA+AGG | - | chr3.4:46790088-46790107 | None:intergenic | 20.0% |
| !! | AAATGTTTATAGGTTTCTTA+TGG | + | chr3.4:46791466-46791485 | MS.gene027187:intron | 20.0% |
| !! | AAGATATTGTAACACAAAAA+GGG | - | chr3.4:46790087-46790106 | None:intergenic | 20.0% |
| !! | AAGTGCAATTTACATTTAAT+TGG | - | chr3.4:46791820-46791839 | None:intergenic | 20.0% |
| !! | AATCAAAGAGAAATGTTTAT+AGG | + | chr3.4:46791456-46791475 | MS.gene027187:intron | 20.0% |
| !! | AATCAAATATGTACATGATA+TGG | + | chr3.4:46789815-46789834 | MS.gene027187:intron | 20.0% |
| !! | AATGTTTATAGGTTTCTTAT+GGG | + | chr3.4:46791467-46791486 | MS.gene027187:intron | 20.0% |
| !! | CAAAATTCTTATACATTTCA+AGG | - | chr3.4:46790392-46790411 | None:intergenic | 20.0% |
| !! | TAAATAACTATGACTCTATT+TGG | - | chr3.4:46788278-46788297 | None:intergenic | 20.0% |
| !! | TAAATGATTGATTACATCAA+AGG | - | chr3.4:46791579-46791598 | None:intergenic | 20.0% |
| !! | TGAATAGTGATTTATTGTAA+AGG | + | chr3.4:46792335-46792354 | MS.gene027187:intron | 20.0% |
| !! | TTATGATATTCTATATATGC+AGG | + | chr3.4:46789082-46789101 | MS.gene027187:intron | 20.0% |
| !! | TTATTTATTGCAGAATTGTA+AGG | + | chr3.4:46791717-46791736 | MS.gene027187:intron | 20.0% |
| !! | TTCTATAACTTTGATATAGA+CGG | + | chr3.4:46788926-46788945 | MS.gene027187:intron | 20.0% |
| !! | TTGTTTGTTTGCTTTATAAA+TGG | + | chr3.4:46792762-46792781 | MS.gene027187:intron | 20.0% |
| !!! | AAATAGTGCCAAATTTTTAA+GGG | + | chr3.4:46792473-46792492 | MS.gene027187:intron | 20.0% |
| !!! | AGTCTACCAATTATTTTTTT+AGG | + | chr3.4:46791200-46791219 | MS.gene027187:intron | 20.0% |
| !!! | CTGAATTTGTTATTAATATC+TGG | + | chr3.4:46790520-46790539 | MS.gene027187:intron | 20.0% |
| !!! | GTTTTGTTTTGTTTCTTTTA+AGG | + | chr3.4:46792393-46792412 | MS.gene027187:intron | 20.0% |
| !!! | TAAATAGTGCCAAATTTTTA+AGG | + | chr3.4:46792472-46792491 | MS.gene027187:intron | 20.0% |
| !!! | TAAGTTTTACAATCTAAAGT+TGG | + | chr3.4:46791054-46791073 | MS.gene027187:intron | 20.0% |
| !!! | TAATTTTTTTGTTACTGTCT+AGG | + | chr3.4:46791601-46791620 | MS.gene027187:intron | 20.0% |
| !!! | TTATATTTGAGCTATTCTTT+TGG | + | chr3.4:46790260-46790279 | MS.gene027187:intron | 20.0% |
| !!! | TTCTTGATTTTTGTTTTTTG+GGG | + | chr3.4:46790493-46790512 | MS.gene027187:intron | 20.0% |
| !!! | TTTTTTAGGTTAAAATCATG+CGG | + | chr3.4:46791214-46791233 | MS.gene027187:intron | 20.0% |
| ! | AACACTGAAGAAATAAAAGA+TGG | + | chr3.4:46788681-46788700 | MS.gene027187:CDS | 25.0% |
| ! | AATTGCAGAAAATTGAAGAT+TGG | + | chr3.4:46787523-46787542 | MS.gene027187:intron | 25.0% |
| ! | ACAATAAGAAAAGAGTTACA+TGG | + | chr3.4:46787349-46787368 | MS.gene027187:CDS | 25.0% |
| ! | ACAATCTCTAAACAAATTTG+AGG | + | chr3.4:46789988-46790007 | MS.gene027187:intron | 25.0% |
| ! | ACTGAAAATATTATCATGCA+CGG | - | chr3.4:46792367-46792386 | None:intergenic | 25.0% |
| ! | AGATATTGTAACACAAAAAG+GGG | - | chr3.4:46790086-46790105 | None:intergenic | 25.0% |
| ! | ATAACAGAAGTAAATGCATA+TGG | - | chr3.4:46790244-46790263 | None:intergenic | 25.0% |
| ! | ATACCTACTAATTCAACATA+TGG | - | chr3.4:46791497-46791516 | None:intergenic | 25.0% |
| ! | ATCAGAGATTTGTATAGAAT+TGG | - | chr3.4:46793012-46793031 | None:intergenic | 25.0% |
| ! | ATGAAAACAACTTATGACAT+TGG | + | chr3.4:46787854-46787873 | MS.gene027187:intron | 25.0% |
| ! | ATGTGTGGCTATTATATAAT+TGG | + | chr3.4:46790633-46790652 | MS.gene027187:intron | 25.0% |
| ! | ATGTTGAATTAGTAGGTATT+AGG | + | chr3.4:46791498-46791517 | MS.gene027187:intron | 25.0% |
| ! | CAAAAATTACCTGAAGATAT+TGG | - | chr3.4:46792296-46792315 | None:intergenic | 25.0% |
| ! | CAATAAGAAAAGAGTTACAT+GGG | + | chr3.4:46787350-46787369 | MS.gene027187:CDS | 25.0% |
| ! | CAATCTCTAAACAAATTTGA+GGG | + | chr3.4:46789989-46790008 | MS.gene027187:intron | 25.0% |
| ! | CTAACTTTGGTTATAACTTT+AGG | + | chr3.4:46792436-46792455 | MS.gene027187:intron | 25.0% |
| ! | CTATGTATATATCCTTGAAT+TGG | + | chr3.4:46790669-46790688 | MS.gene027187:intron | 25.0% |
| ! | GATAAAGAGAGTAAACAATT+TGG | - | chr3.4:46789525-46789544 | None:intergenic | 25.0% |
| ! | TATAGTCTGAAAAATGTGAA+GGG | + | chr3.4:46790602-46790621 | MS.gene027187:intron | 25.0% |
| ! | TATTTATCACCAATATCTTC+AGG | + | chr3.4:46792284-46792303 | MS.gene027187:CDS | 25.0% |
| ! | TCTATAACTTTGATATAGAC+GGG | + | chr3.4:46788927-46788946 | MS.gene027187:intron | 25.0% |
| ! | TGAACAAAAGTTTATAAGCT+GGG | + | chr3.4:46788129-46788148 | MS.gene027187:intron | 25.0% |
| ! | TGTTACTAACATTACCTAAA+TGG | - | chr3.4:46788665-46788684 | None:intergenic | 25.0% |
| ! | TGTTTGATCCCTTAAAAATT+TGG | - | chr3.4:46792484-46792503 | None:intergenic | 25.0% |
| ! | TTATAGTCTGAAAAATGTGA+AGG | + | chr3.4:46790601-46790620 | MS.gene027187:intron | 25.0% |
| ! | TTCCATTCTTAACAATCTTT+GGG | + | chr3.4:46790980-46790999 | MS.gene027187:intron | 25.0% |
| ! | TTTCCATTCTTAACAATCTT+TGG | + | chr3.4:46790979-46790998 | MS.gene027187:intron | 25.0% |
| ! | TTTGTATGCAATTCATATCT+TGG | + | chr3.4:46791095-46791114 | MS.gene027187:CDS | 25.0% |
| !! | AAAAGAAGTAGCATCTTTTA+TGG | + | chr3.4:46789498-46789517 | MS.gene027187:intron | 25.0% |
| !! | AAAATTTTCAAAGCTTCCTT+TGG | + | chr3.4:46792684-46792703 | MS.gene027187:intron | 25.0% |
| !! | ATTGGTGATAAATAGCAAAT+GGG | - | chr3.4:46792278-46792297 | None:intergenic | 25.0% |
| !! | TATTGGTGATAAATAGCAAA+TGG | - | chr3.4:46792279-46792298 | None:intergenic | 25.0% |
| !! | TTTAGAGTGAAGATGTAATT+TGG | + | chr3.4:46789240-46789259 | MS.gene027187:intron | 25.0% |
| !!! | AAGAAGTATCCATTGAAAAT+TGG | + | chr3.4:46790205-46790224 | MS.gene027187:CDS | 25.0% |
| !!! | AGAAGTATCCATTGAAAATT+GGG | + | chr3.4:46790206-46790225 | MS.gene027187:CDS | 25.0% |
| !!! | ATGTTCAACTTGTTTTCATA+AGG | + | chr3.4:46787894-46787913 | MS.gene027187:intron | 25.0% |
| !!! | CATATAAGCTGTTTTCATAA+GGG | - | chr3.4:46787930-46787949 | None:intergenic | 25.0% |
| !!! | GATACACATGCTTTAAAAAT+TGG | + | chr3.4:46790416-46790435 | MS.gene027187:intron | 25.0% |
| !!! | GGTCAAAACTTGTTATAAAT+TGG | + | chr3.4:46788424-46788443 | MS.gene027187:intron | 25.0% |
| !!! | GTATATTATAAAGGGCATTA+TGG | + | chr3.4:46787990-46788009 | MS.gene027187:intron | 25.0% |
| !!! | GTTGTTTTTGATAAAGTTTG+TGG | - | chr3.4:46790470-46790489 | None:intergenic | 25.0% |
| !!! | TCATATAAGCTGTTTTCATA+AGG | - | chr3.4:46787931-46787950 | None:intergenic | 25.0% |
| AAATATCCTCACAATATCCA+TGG | - | chr3.4:46791132-46791151 | None:intergenic | 30.0% | |
| AATAAACCAATCCAAACAGA+CGG | - | chr3.4:46787786-46787805 | None:intergenic | 30.0% | |
| ACTTATCATTACAAGCGATT+GGG | + | chr3.4:46788226-46788245 | MS.gene027187:intron | 30.0% | |
| AGTTTGATAAAAGTGGTAAG+AGG | - | chr3.4:46792251-46792270 | None:intergenic | 30.0% | |
| ATAGTCTGAAAAATGTGAAG+GGG | + | chr3.4:46790603-46790622 | MS.gene027187:intron | 30.0% | |
| ATATTCTATATATGCAGGCA+GGG | + | chr3.4:46789087-46789106 | MS.gene027187:intron | 30.0% | |
| ATATTGAACTAGTTGCTAAG+TGG | - | chr3.4:46788473-46788492 | None:intergenic | 30.0% | |
| ATCGATATGTATACTTAGAG+AGG | + | chr3.4:46792576-46792595 | MS.gene027187:intron | 30.0% | |
| ATGCTGTTGAAAACTAACAA+TGG | - | chr3.4:46788397-46788416 | None:intergenic | 30.0% | |
| CAATGGATACTTCTTGAAAT+AGG | - | chr3.4:46790200-46790219 | None:intergenic | 30.0% | |
| CTGAACAAAAGTTTATAAGC+TGG | + | chr3.4:46788128-46788147 | MS.gene027187:intron | 30.0% | |
| GAAAATGGAATTTCTGATCT+TGG | + | chr3.4:46791965-46791984 | MS.gene027187:CDS | 30.0% | |
| GACAAAAATAGCTAAATACC+TGG | - | chr3.4:46792874-46792893 | None:intergenic | 30.0% | |
| GTAAGTATGCAACATATTGA+AGG | - | chr3.4:46787761-46787780 | None:intergenic | 30.0% | |
| GTTAGTTAGAAACCAATTCA+AGG | - | chr3.4:46790684-46790703 | None:intergenic | 30.0% | |
| GTTTACAGAAAAGTAAGATG+TGG | - | chr3.4:46789007-46789026 | None:intergenic | 30.0% | |
| GTTTATTGTTCTGCTAACTT+TGG | + | chr3.4:46792423-46792442 | MS.gene027187:intron | 30.0% | |
| TACCCAAAGATTGTTAAGAA+TGG | - | chr3.4:46790985-46791004 | None:intergenic | 30.0% | |
| TACTAACATTACCTAAATGG+TGG | - | chr3.4:46788662-46788681 | None:intergenic | 30.0% | |
| TAGCCATATGTTGAATTAGT+AGG | + | chr3.4:46791491-46791510 | MS.gene027187:intron | 30.0% | |
| TATATCTTAGAACTTTGGGT+TGG | - | chr3.4:46788199-46788218 | None:intergenic | 30.0% | |
| TGTATCAAATGTTGCACTAT+TGG | - | chr3.4:46789148-46789167 | None:intergenic | 30.0% | |
| TTCTGAATTGTTGTCACAAA+AGG | + | chr3.4:46791748-46791767 | MS.gene027187:CDS | 30.0% | |
| TTGTGACAACAATTCAGAAA+TGG | - | chr3.4:46791747-46791766 | None:intergenic | 30.0% | |
| ! | AAGGATGCTTCAATTTTGTA+TGG | - | chr3.4:46791560-46791579 | None:intergenic | 30.0% |
| ! | ACATCTTACCCAATTTTCAA+TGG | - | chr3.4:46790217-46790236 | None:intergenic | 30.0% |
| ! | AGGTTATCTGTGATTGATTT+CGG | + | chr3.4:46788557-46788576 | MS.gene027187:intron | 30.0% |
| ! | ATATCTTAGAACTTTGGGTT+GGG | - | chr3.4:46788198-46788217 | None:intergenic | 30.0% |
| ! | CAGCTTATAAACTTTTGTTC+AGG | - | chr3.4:46788130-46788149 | None:intergenic | 30.0% |
| ! | CTGTTTTCATAAGGGATTTT+GGG | - | chr3.4:46787922-46787941 | None:intergenic | 30.0% |
| ! | CTTCAATTTTGTATGGTGAT+TGG | - | chr3.4:46791553-46791572 | None:intergenic | 30.0% |
| ! | TAGTTTGGAACACTTTGTAT+TGG | + | chr3.4:46791330-46791349 | MS.gene027187:intron | 30.0% |
| ! | TTGGTGATAAATAGCAAATG+GGG | - | chr3.4:46792277-46792296 | None:intergenic | 30.0% |
| !! | ATTAGCATTGACACATATAC+CGG | + | chr3.4:46787658-46787677 | MS.gene027187:intron | 30.0% |
| !! | GTTTTCAACAGCATTTTTTG+TGG | + | chr3.4:46788403-46788422 | MS.gene027187:intron | 30.0% |
| !!! | ATCTAAAGTTGGTGTTTTAC+AGG | + | chr3.4:46791065-46791084 | MS.gene027187:intron | 30.0% |
| !!! | GAAGTTTTGTTTCTTTTGTC+TGG | + | chr3.4:46791677-46791696 | MS.gene027187:intron | 30.0% |
| !!! | TGTTTTTTGCAGTATATGTG+AGG | + | chr3.4:46790174-46790193 | MS.gene027187:intron | 30.0% |
| AAACGCAAGAAAAGTGAACT+CGG | - | chr3.4:46790557-46790576 | None:intergenic | 35.0% | |
| AAGAAAAGAGTTACATGGGA+AGG | + | chr3.4:46787354-46787373 | MS.gene027187:CDS | 35.0% | |
| AAGATATAGAAGACATGCGA+AGG | + | chr3.4:46788802-46788821 | MS.gene027187:CDS | 35.0% | |
| AATGCACTTATTTGCATGCA+TGG | - | chr3.4:46793085-46793104 | None:intergenic | 35.0% | |
| ACATCCATTTGAGCAATATG+AGG | + | chr3.4:46788529-46788548 | MS.gene027187:intron | 35.0% | |
| ACATCTTTAATGTCCGTATG+TGG | + | chr3.4:46790317-46790336 | MS.gene027187:intron | 35.0% | |
| ACATTCAGACAAGTTGTACA+AGG | - | chr3.4:46791648-46791667 | None:intergenic | 35.0% | |
| ACTAGTTGCTAAGTGGTTAT+CGG | - | chr3.4:46788466-46788485 | None:intergenic | 35.0% | |
| ATCCAATGTAAGGCTCTTAA+CGG | - | chr3.4:46788098-46788117 | None:intergenic | 35.0% | |
| ATCTCTCATTCGTCAGAAAA+TGG | + | chr3.4:46791950-46791969 | MS.gene027187:CDS | 35.0% | |
| ATGCAAATAAGTGCATTTGG+TGG | + | chr3.4:46793088-46793107 | MS.gene027187:CDS | 35.0% | |
| ATGCAATTCATATCTTGGAC+AGG | + | chr3.4:46791100-46791119 | MS.gene027187:CDS | 35.0% | |
| ATGCACTTATTTGCATGCAT+GGG | - | chr3.4:46793084-46793103 | None:intergenic | 35.0% | |
| ATTCTCGTTGTTGATATGGT+TGG | + | chr3.4:46790782-46790801 | MS.gene027187:CDS | 35.0% | |
| ATTGTCCCTTCTACTTTCAA+TGG | + | chr3.4:46790736-46790755 | MS.gene027187:CDS | 35.0% | |
| ATTTAACTATCCTGTACTCC+TGG | + | chr3.4:46792626-46792645 | MS.gene027187:intron | 35.0% | |
| CAAAATCCGAAACATGATGA+CGG | + | chr3.4:46791782-46791801 | MS.gene027187:CDS | 35.0% | |
| CAATCTACAGCTTGAGAAAA+TGG | + | chr3.4:46792808-46792827 | MS.gene027187:CDS | 35.0% | |
| CACTTATCATTACAAGCGAT+TGG | + | chr3.4:46788225-46788244 | MS.gene027187:intron | 35.0% | |
| CATCCATTTGAGCAATATGA+GGG | + | chr3.4:46788530-46788549 | MS.gene027187:intron | 35.0% | |
| CCTTACAAAACCAGTTTGTA+AGG | - | chr3.4:46788165-46788184 | None:intergenic | 35.0% | |
| GACGATACCAAATAATCGAA+GGG | + | chr3.4:46789447-46789466 | MS.gene027187:intron | 35.0% | |
| GATAACCATAAGTCATTGAG+TGG | - | chr3.4:46790148-46790167 | None:intergenic | 35.0% | |
| GATATTCTATATATGCAGGC+AGG | + | chr3.4:46789086-46789105 | MS.gene027187:intron | 35.0% | |
| GGTTGAAATGGAGATAGAAA+AGG | - | chr3.4:46787631-46787650 | None:intergenic | 35.0% | |
| GTATAAGCTATTCCTATAGC+AGG | - | chr3.4:46788076-46788095 | None:intergenic | 35.0% | |
| GTGTCAATGCTAATACCTTT+GGG | - | chr3.4:46787652-46787671 | None:intergenic | 35.0% | |
| GTTAGCCATTGAAAGTAGAA+GGG | - | chr3.4:46790744-46790763 | None:intergenic | 35.0% | |
| TAAAGATGCCACACATCTAA+AGG | - | chr3.4:46790584-46790603 | None:intergenic | 35.0% | |
| TAAGTGACGAAATCTGCAAA+AGG | + | chr3.4:46791156-46791175 | MS.gene027187:CDS | 35.0% | |
| TACAAAAACGTCATTCTCAC+AGG | + | chr3.4:46789164-46789183 | MS.gene027187:CDS | 35.0% | |
| TATTATTGTCGATCAACGAC+CGG | - | chr3.4:46788761-46788780 | None:intergenic | 35.0% | |
| TCTGTTCACTCAGTTGTTAA+CGG | + | chr3.4:46792732-46792751 | MS.gene027187:intron | 35.0% | |
| TCTTGTAGAATAGTGCCAAA+AGG | - | chr3.4:46789941-46789960 | None:intergenic | 35.0% | |
| TGACATTCTCGTTGTTGATA+TGG | + | chr3.4:46790778-46790797 | MS.gene027187:CDS | 35.0% | |
| TGACGATACCAAATAATCGA+AGG | + | chr3.4:46789446-46789465 | MS.gene027187:intron | 35.0% | |
| TGCATGCAAATAAGTGCATT+TGG | + | chr3.4:46793085-46793104 | MS.gene027187:CDS | 35.0% | |
| TGTAGATCATGTGTAGGTTT+GGG | + | chr3.4:46792653-46792672 | MS.gene027187:intron | 35.0% | |
| TGTATCCACTCAATGACTTA+TGG | + | chr3.4:46790140-46790159 | MS.gene027187:intron | 35.0% | |
| TGTCTATACAAATCAGTTCC+AGG | + | chr3.4:46789302-46789321 | MS.gene027187:intron | 35.0% | |
| TGTGTCAATGCTAATACCTT+TGG | - | chr3.4:46787653-46787672 | None:intergenic | 35.0% | |
| TTAATGTCCGTATGTGGTTT+AGG | + | chr3.4:46790323-46790342 | MS.gene027187:intron | 35.0% | |
| ! | AAACAAATTTGAGGGCCTTT+TGG | + | chr3.4:46789997-46790016 | MS.gene027187:intron | 35.0% |
| ! | AGTTGAAAAACAGTACCGAA+TGG | - | chr3.4:46787586-46787605 | None:intergenic | 35.0% |
| ! | CTCTGTTATTTGCAATCCAA+TGG | - | chr3.4:46792834-46792853 | None:intergenic | 35.0% |
| ! | CTGATTTGTATAGACAGAAG+AGG | - | chr3.4:46789298-46789317 | None:intergenic | 35.0% |
| ! | GAACAGAAGCACAATCTATT+TGG | - | chr3.4:46792719-46792738 | None:intergenic | 35.0% |
| ! | GGAAGGAAAATGGTTTTTCT+AGG | + | chr3.4:46792092-46792111 | MS.gene027187:CDS | 35.0% |
| ! | TGCATCTAGAGCTATTCATT+TGG | - | chr3.4:46791398-46791417 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTATCCTGCTAT+AGG | + | chr3.4:46788061-46788080 | MS.gene027187:intron | 35.0% |
| !! | AGTTCACTTTTCTTGCGTTT+TGG | + | chr3.4:46790557-46790576 | MS.gene027187:intron | 35.0% |
| !! | CTAATACCTTTGGGTTGAAA+TGG | - | chr3.4:46787643-46787662 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGGGATTT+TGG | - | chr3.4:46787923-46787942 | None:intergenic | 35.0% |
| !! | TATATGTCTTTGGAGCATCT+GGG | + | chr3.4:46789859-46789878 | MS.gene027187:intron | 35.0% |
| !! | TTATATGTCTTTGGAGCATC+TGG | + | chr3.4:46789858-46789877 | MS.gene027187:intron | 35.0% |
| !!! | CCTTACAAACTGGTTTTGTA+AGG | + | chr3.4:46788162-46788181 | MS.gene027187:intron | 35.0% |
| !!! | TCTTTTATTTTGATCCCCGA+GGG | - | chr3.4:46789484-46789503 | None:intergenic | 35.0% |
| !!! | TGAGGACATCTTGTTTTGTT+TGG | + | chr3.4:46788825-46788844 | MS.gene027187:intron | 35.0% |
| !!! | TGGTTTTGTAAGGTTGAGTT+AGG | + | chr3.4:46788172-46788191 | MS.gene027187:intron | 35.0% |
| !!! | TTCTTTTATTTTGATCCCCG+AGG | - | chr3.4:46789485-46789504 | None:intergenic | 35.0% |
| AAGAGCCTGCAAAGCTATAA+AGG | + | chr3.4:46792033-46792052 | MS.gene027187:CDS | 40.0% | |
| AATATGTGCATCAGTCAGCA+TGG | + | chr3.4:46791922-46791941 | MS.gene027187:CDS | 40.0% | |
| AATGTCCAAGTATCCAAGTC+TGG | - | chr3.4:46792219-46792238 | None:intergenic | 40.0% | |
| AATTATTGCTGCACCAGACT+TGG | + | chr3.4:46792203-46792222 | MS.gene027187:CDS | 40.0% | |
| ACAGTCTTCACCTTACAAAC+TGG | + | chr3.4:46788152-46788171 | MS.gene027187:intron | 40.0% | |
| AGACTTGGATACTTGGACAT+TGG | + | chr3.4:46792218-46792237 | MS.gene027187:CDS | 40.0% | |
| AGCTATAAAGGCTGGAGAAA+AGG | + | chr3.4:46792045-46792064 | MS.gene027187:CDS | 40.0% | |
| ATCCTCACAATATCCATGGA+TGG | - | chr3.4:46791128-46791147 | None:intergenic | 40.0% | |
| CATACTTACTACCGTCTGTT+TGG | + | chr3.4:46787772-46787791 | MS.gene027187:intron | 40.0% | |
| CATTTGAGCAATATGAGGGA+GGG | + | chr3.4:46788534-46788553 | MS.gene027187:intron | 40.0% | |
| CGTTAGCCATTGAAAGTAGA+AGG | - | chr3.4:46790745-46790764 | None:intergenic | 40.0% | |
| CTAATTCAGATTCTTGCGTG+TGG | + | chr3.4:46790709-46790728 | MS.gene027187:intron | 40.0% | |
| CTATCTCCATTTCAACCCAA+AGG | + | chr3.4:46787634-46787653 | MS.gene027187:CDS | 40.0% | |
| CTTCTATATCTTCACCAGTG+AGG | - | chr3.4:46788794-46788813 | None:intergenic | 40.0% | |
| GATTGCAAATAACAGAGCCT+TGG | + | chr3.4:46792837-46792856 | MS.gene027187:CDS | 40.0% | |
| GCCTTACATTGGATGAGATA+AGG | + | chr3.4:46788104-46788123 | MS.gene027187:intron | 40.0% | |
| GCCTTATCTCATCCAATGTA+AGG | - | chr3.4:46788108-46788127 | None:intergenic | 40.0% | |
| GTAGTCACCCTTCGATTATT+TGG | - | chr3.4:46789457-46789476 | None:intergenic | 40.0% | |
| GTCTTGCTTGATATCAACGA+TGG | + | chr3.4:46787384-46787403 | MS.gene027187:CDS | 40.0% | |
| GTGTAGATCATGTGTAGGTT+TGG | + | chr3.4:46792652-46792671 | MS.gene027187:intron | 40.0% | |
| TACATCTCGATCCACCATTT+AGG | + | chr3.4:46788648-46788667 | MS.gene027187:intron | 40.0% | |
| TACCGTTAAGAGCCTTACAT+TGG | + | chr3.4:46788093-46788112 | MS.gene027187:intron | 40.0% | |
| TATTTGGCATTCAGTGCCAA+AGG | - | chr3.4:46792703-46792722 | None:intergenic | 40.0% | |
| TCAAAAGATGGTCAACTCAC+TGG | + | chr3.4:46788720-46788739 | MS.gene027187:CDS | 40.0% | |
| TCTCTGACCTAAACCACATA+CGG | - | chr3.4:46790333-46790352 | None:intergenic | 40.0% | |
| TTACTACCGTCTGTTTGGAT+TGG | + | chr3.4:46787777-46787796 | MS.gene027187:intron | 40.0% | |
| TTTCTCTTTCAGTGCATCAG+TGG | - | chr3.4:46791275-46791294 | None:intergenic | 40.0% | |
| ! | ACTTGTTGCAACATGAAGAC+TGG | - | chr3.4:46791250-46791269 | None:intergenic | 40.0% |
| ! | AGAGTAAAAACGAAGAGTGC+AGG | - | chr3.4:46788611-46788630 | None:intergenic | 40.0% |
| ! | GATTGATTTCGGCTTCTTTG+TGG | + | chr3.4:46788568-46788587 | MS.gene027187:intron | 40.0% |
| ! | GGACGTCTCATAAGTACTTT+TGG | - | chr3.4:46789619-46789638 | None:intergenic | 40.0% |
| ! | TCTGGGTTTTGCTCTGATAA+TGG | + | chr3.4:46789876-46789895 | MS.gene027187:intron | 40.0% |
| ! | TGGAACACTTTGTATTGGCA+TGG | + | chr3.4:46791335-46791354 | MS.gene027187:intron | 40.0% |
| ! | TTGGTGGTTACATTCTCAGT+GGG | + | chr3.4:46793104-46793123 | MS.gene027187:CDS | 40.0% |
| ! | TTTGGTGGTTACATTCTCAG+TGG | + | chr3.4:46793103-46793122 | MS.gene027187:CDS | 40.0% |
| !! | AAGTGGTTATCGGCTTATCA+TGG | - | chr3.4:46788456-46788475 | None:intergenic | 40.0% |
| !! | AGAAATCATTGACTCGTGGA+AGG | + | chr3.4:46792075-46792094 | MS.gene027187:CDS | 40.0% |
| !! | AGATAGAAAAGGAGCACCAT+CGG | - | chr3.4:46787620-46787639 | None:intergenic | 40.0% |
| !! | ATTGACTCGTGGAAGGAAAA+TGG | + | chr3.4:46792082-46792101 | MS.gene027187:CDS | 40.0% |
| !! | CTCAAGAAATCATTGACTCG+TGG | + | chr3.4:46792071-46792090 | MS.gene027187:CDS | 40.0% |
| !! | GAGTTGACCATCTTTTGACT+CGG | - | chr3.4:46788718-46788737 | None:intergenic | 40.0% |
| !! | GTTTTGGACCTTTAGATGTG+TGG | + | chr3.4:46790573-46790592 | MS.gene027187:intron | 40.0% |
| ACACATGATCTACACTCTCC+AGG | - | chr3.4:46792647-46792666 | None:intergenic | 45.0% | |
| ACTATCACCAAATGCCGGAA+GGG | - | chr3.4:46789345-46789364 | None:intergenic | 45.0% | |
| AGAAAAGAAACTGACGCTGC+AGG | - | chr3.4:46787438-46787457 | None:intergenic | 45.0% | |
| AGGGGAGCAAAGTGAAATCA+AGG | - | chr3.4:46790068-46790087 | None:intergenic | 45.0% | |
| ATAGAAGACATGCGAAGGTG+AGG | + | chr3.4:46788807-46788826 | MS.gene027187:intron | 45.0% | |
| ATCTTCACCAGTGAGGCTTT+GGG | - | chr3.4:46788787-46788806 | None:intergenic | 45.0% | |
| ATGCATGGGTGAGTTCTTGA+TGG | - | chr3.4:46793070-46793089 | None:intergenic | 45.0% | |
| CACCATCCATGGATATTGTG+AGG | + | chr3.4:46791123-46791142 | MS.gene027187:CDS | 45.0% | |
| CAGCTTGAGAAAATGGCCAT+TGG | + | chr3.4:46792815-46792834 | MS.gene027187:CDS | 45.0% | |
| CCATTTGAGCAATATGAGGG+AGG | + | chr3.4:46788533-46788552 | MS.gene027187:intron | 45.0% | |
| CCTCCCTCATATTGCTCAAA+TGG | - | chr3.4:46788536-46788555 | None:intergenic | 45.0% | |
| CTCGTTGTTGATATGGTTGG+TGG | + | chr3.4:46790785-46790804 | MS.gene027187:CDS | 45.0% | |
| GAAGCTCACTATATCTGTGC+AGG | + | chr3.4:46789558-46789577 | MS.gene027187:intron | 45.0% | |
| GGGGAGCAAAGTGAAATCAA+GGG | - | chr3.4:46790067-46790086 | None:intergenic | 45.0% | |
| GGGGCAGAGTTTGATAAAAG+TGG | - | chr3.4:46792258-46792277 | None:intergenic | 45.0% | |
| GTTTGTGTCAGTGTCGTATC+CGG | - | chr3.4:46787680-46787699 | None:intergenic | 45.0% | |
| TACTCTCACTCTAACCTGCA+TGG | + | chr3.4:46788625-46788644 | MS.gene027187:intron | 45.0% | |
| TATCTTCACCAGTGAGGCTT+TGG | - | chr3.4:46788788-46788807 | None:intergenic | 45.0% | |
| TTCCAAGCCGAGTCAAAAGA+TGG | + | chr3.4:46788708-46788727 | MS.gene027187:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3.4:46788039-46788058 | None:intergenic | 45.0% |
| ! | ATAGTGCCAAAAGGCATGAC+AGG | - | chr3.4:46789932-46789951 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3.4:46788040-46788059 | None:intergenic | 45.0% |
| ! | GGAGAGTGTAGATCATGTGT+AGG | + | chr3.4:46792647-46792666 | MS.gene027187:intron | 45.0% |
| ! | TCAACTCACTGGTGAGTTGA+GGG | + | chr3.4:46788731-46788750 | MS.gene027187:CDS | 45.0% |
| ! | TCCAGCCTTTATAGCTTTGC+AGG | - | chr3.4:46792041-46792060 | None:intergenic | 45.0% |
| !! | AATCCGAAACATGATGACGG+CGG | + | chr3.4:46791785-46791804 | MS.gene027187:CDS | 45.0% |
| !! | AGTTGGTGTTTTACAGGCAC+TGG | + | chr3.4:46791071-46791090 | MS.gene027187:intron | 45.0% |
| !! | GATAGAAAAGGAGCACCATC+GGG | - | chr3.4:46787619-46787638 | None:intergenic | 45.0% |
| AAAGGTCACCTTCGAGCAAC+AGG | - | chr3.4:46789640-46789659 | None:intergenic | 50.0% | |
| AAGGGTGACTACTTCACCCT+CGG | + | chr3.4:46789465-46789484 | MS.gene027187:intron | 50.0% | |
| AATACTGCCCAAAGCCTCAC+TGG | + | chr3.4:46788777-46788796 | MS.gene027187:CDS | 50.0% | |
| ACACCGCCGTCATCATGTTT+CGG | - | chr3.4:46791791-46791810 | None:intergenic | 50.0% | |
| ACCTGGTATTCACGTAGCCA+AGG | - | chr3.4:46792857-46792876 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr3.4:46788027-46788046 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr3.4:46788026-46788045 | MS.gene027187:intron | 50.0% | |
| ATGTGCATCAGTCAGCATGG+AGG | + | chr3.4:46791925-46791944 | MS.gene027187:CDS | 50.0% | |
| CACGCGCGTATTGTGTACTT+TGG | + | chr3.4:46788903-46788922 | MS.gene027187:intron | 50.0% | |
| CACTATCACCAAATGCCGGA+AGG | - | chr3.4:46789346-46789365 | None:intergenic | 50.0% | |
| CCACTGATCGGTTGTCCATT+CGG | + | chr3.4:46787568-46787587 | MS.gene027187:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3.4:46788038-46788057 | MS.gene027187:intron | 50.0% | |
| CGCTCACTATCACCAAATGC+CGG | - | chr3.4:46789350-46789369 | None:intergenic | 50.0% | |
| CTGCACCAGACTTGGATACT+TGG | + | chr3.4:46792211-46792230 | MS.gene027187:CDS | 50.0% | |
| GCCTGCAAAGCTATAAAGGC+TGG | + | chr3.4:46792037-46792056 | MS.gene027187:CDS | 50.0% | |
| GGCTCTTAGAGCAGGAAATG+TGG | - | chr3.4:46792020-46792039 | None:intergenic | 50.0% | |
| GTCAACTCACTGGTGAGTTG+AGG | + | chr3.4:46788730-46788749 | MS.gene027187:CDS | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr3.4:46788033-46788052 | MS.gene027187:intron | 50.0% | |
| TGCTAACAAGTCCACCCTTC+CGG | + | chr3.4:46789328-46789347 | MS.gene027187:intron | 50.0% | |
| TGCTCACTACAGCCACTGAT+CGG | + | chr3.4:46787556-46787575 | MS.gene027187:CDS | 50.0% | |
| TGGATCGAGATGTACCATGC+AGG | - | chr3.4:46788642-46788661 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | + | chr3.4:46788027-46788046 | MS.gene027187:intron | 50.0% | |
| TTGAGCAATATGAGGGAGGG+AGG | + | chr3.4:46788537-46788556 | MS.gene027187:intron | 50.0% | |
| TTGTGCATGCACGTTGCTAG+AGG | - | chr3.4:46792791-46792810 | None:intergenic | 50.0% | |
| ! | ATATGCAGGCAGGGTGCTAA+GGG | + | chr3.4:46789096-46789115 | MS.gene027187:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3.4:46788041-46788060 | None:intergenic | 50.0% |
| ! | CTACGTCCTGTCATGCCTTT+TGG | + | chr3.4:46789923-46789942 | MS.gene027187:intron | 50.0% |
| ! | TATATGCAGGCAGGGTGCTA+AGG | + | chr3.4:46789095-46789114 | MS.gene027187:intron | 50.0% |
| ! | TCTACACTCTCCAGGAGTAC+AGG | - | chr3.4:46792639-46792658 | None:intergenic | 50.0% |
| !! | ATGGTTGGTGGCCTTCTTAC+TGG | + | chr3.4:46790797-46790816 | MS.gene027187:CDS | 50.0% |
| !! | GTGGACTTGTTAGCAAGTCC+TGG | - | chr3.4:46789323-46789342 | None:intergenic | 50.0% |
| !!! | GACCATCTTTTGACTCGGCT+TGG | - | chr3.4:46788713-46788732 | None:intergenic | 50.0% |
| AAGTCCACCCTTCCGGCATT+TGG | + | chr3.4:46789335-46789354 | MS.gene027187:intron | 55.0% | |
| AGGGTGACTACTTCACCCTC+GGG | + | chr3.4:46789466-46789485 | MS.gene027187:intron | 55.0% | |
| ATCACCAAATGCCGGAAGGG+TGG | - | chr3.4:46789342-46789361 | None:intergenic | 55.0% | |
| CAACTCGACACTTCTCCCGA+TGG | + | chr3.4:46787601-46787620 | MS.gene027187:CDS | 55.0% | |
| CCGAATGGACAACCGATCAG+TGG | - | chr3.4:46787571-46787590 | None:intergenic | 55.0% | |
| CTGCCACAGCACCAGTAAGA+AGG | - | chr3.4:46790811-46790830 | None:intergenic | 55.0% | |
| GCCTTGGCTACGTGAATACC+AGG | + | chr3.4:46792853-46792872 | MS.gene027187:CDS | 55.0% | |
| GCTTTGCAGGCTCTTAGAGC+AGG | - | chr3.4:46792028-46792047 | None:intergenic | 55.0% | |
| TCTTGGACAGGCACCATCCA+TGG | + | chr3.4:46791112-46791131 | MS.gene027187:CDS | 55.0% | |
| TGAGACGTCCTGTTGCTCGA+AGG | + | chr3.4:46789629-46789648 | MS.gene027187:CDS | 55.0% | |
| ! | CTGGTGAGTTGAGGGACAAC+CGG | + | chr3.4:46788739-46788758 | MS.gene027187:CDS | 55.0% |
| ! | TGAAGGGGTGTGTGCATGTG+TGG | + | chr3.4:46790618-46790637 | MS.gene027187:intron | 55.0% |
| ! | TGGCCTTCTTACTGGTGCTG+TGG | + | chr3.4:46790805-46790824 | MS.gene027187:CDS | 55.0% |
| !! | GAAACATGATGACGGCGGTG+TGG | + | chr3.4:46791790-46791809 | MS.gene027187:CDS | 55.0% |
| GGGTGACTACTTCACCCTCG+GGG | + | chr3.4:46789467-46789486 | MS.gene027187:intron | 60.0% | |
| ! | GCTGTGGCAGAGCGTTTAGG+AGG | + | chr3.4:46790821-46790840 | MS.gene027187:CDS | 60.0% |
| ! | GGTGCTGTGGCAGAGCGTTT+AGG | + | chr3.4:46790818-46790837 | MS.gene027187:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 46787333 | 46793147 | 46787333 | ID=MS.gene027187 |
| chr3.4 | mRNA | 46787333 | 46793147 | 46787333 | ID=MS.gene027187.t1;Parent=MS.gene027187 |
| chr3.4 | exon | 46787333 | 46787442 | 46787333 | ID=MS.gene027187.t1.exon1;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46787333 | 46787442 | 46787333 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46787531 | 46787655 | 46787531 | ID=MS.gene027187.t1.exon2;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46787531 | 46787655 | 46787531 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46788670 | 46788823 | 46788670 | ID=MS.gene027187.t1.exon3;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46788670 | 46788823 | 46788670 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46789104 | 46789185 | 46789104 | ID=MS.gene027187.t1.exon4;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46789104 | 46789185 | 46789104 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46789580 | 46789650 | 46789580 | ID=MS.gene027187.t1.exon5;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46789580 | 46789650 | 46789580 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46790186 | 46790227 | 46790186 | ID=MS.gene027187.t1.exon6;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46790186 | 46790227 | 46790186 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46790718 | 46790842 | 46790718 | ID=MS.gene027187.t1.exon7;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46790718 | 46790842 | 46790718 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46791087 | 46791177 | 46791087 | ID=MS.gene027187.t1.exon8;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46791087 | 46791177 | 46791087 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46791730 | 46791826 | 46791730 | ID=MS.gene027187.t1.exon9;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46791730 | 46791826 | 46791730 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46791917 | 46792113 | 46791917 | ID=MS.gene027187.t1.exon10;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46791917 | 46792113 | 46791917 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46792200 | 46792305 | 46792200 | ID=MS.gene027187.t1.exon11;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46792200 | 46792305 | 46792200 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46792788 | 46792874 | 46792788 | ID=MS.gene027187.t1.exon12;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46792788 | 46792874 | 46792788 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| chr3.4 | exon | 46793061 | 46793147 | 46793061 | ID=MS.gene027187.t1.exon13;Parent=MS.gene027187.t1 |
| chr3.4 | CDS | 46793061 | 46793147 | 46793061 | ID=cds.MS.gene027187.t1;Parent=MS.gene027187.t1 |
| Gene Sequence |
| Protein sequence |
