Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24165.t1 | XP_003589467.1 | 97.4 | 379 | 10 | 0 | 50 | 428 | 79 | 457 | 5.80E-203 | 716.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24165.t1 | Q54UB1 | 35.9 | 351 | 203 | 5 | 78 | 425 | 116 | 447 | 2.8e-49 | 197.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24165.t1 | G7I755 | 97.4 | 379 | 10 | 0 | 50 | 428 | 79 | 457 | 4.2e-203 | 716.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene24165 | MS.gene30726 | PPI |
| MS.gene24165 | MS.gene047362 | PPI |
| MS.gene24165 | MS.gene059414 | PPI |
| MS.gene24165 | MS.gene066758 | PPI |
| MS.gene24165 | MS.gene054179 | PPI |
| MS.gene24165 | MS.gene004176 | PPI |
| MS.gene24165 | MS.gene99758 | PPI |
| MS.gene24165 | MS.gene01479 | PPI |
| MS.gene24165 | MS.gene054180 | PPI |
| MS.gene24165 | MS.gene77102 | PPI |
| MS.gene24165 | MS.gene002506 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24165.t1 | MTR_1g024920 | 97.361 | 379 | 10 | 0 | 50 | 428 | 79 | 457 | 0.0 | 762 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24165.t1 | AT2G45730 | 61.183 | 389 | 130 | 4 | 50 | 428 | 69 | 446 | 1.15e-151 | 437 |
Find 96 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTATCCATTGAAAAT+TGG | 0.166239 | 1.2:+990693 | MS.gene24165:CDS |
| ATGGTTGGTGGCCTTCTTAC+TGG | 0.198600 | 1.2:+992222 | MS.gene24165:CDS |
| TCCAGCCTTTATAGCTTTGC+AGG | 0.222527 | 1.2:-993439 | None:intergenic |
| ATTGACTCTTGGAAGGAAAA+TGG | 0.240508 | 1.2:+993483 | MS.gene24165:CDS |
| CTTATCAAATGTTGCGCTAT+TGG | 0.243677 | 1.2:-989671 | None:intergenic |
| ATCTCTCATTCGTCAGAAAA+TGG | 0.252753 | 1.2:+993351 | MS.gene24165:CDS |
| AAGTGCAATTTACATTTAAT+TGG | 0.266218 | 1.2:-993230 | None:intergenic |
| AAAACAAGTCTACCTCTTTC+CGG | 0.273749 | 1.2:-987903 | None:intergenic |
| TTTGTATGCAATTCATATCT+TGG | 0.278999 | 1.2:+992531 | MS.gene24165:CDS |
| CAATCTACAGCTTGAGAAAA+TGG | 0.282349 | 1.2:+994217 | MS.gene24165:CDS |
| GAAAATGGAATTTCTGATCT+TGG | 0.300851 | 1.2:+993366 | MS.gene24165:CDS |
| TATCTTCACCAGTGAGGCTT+TGG | 0.305154 | 1.2:-989308 | None:intergenic |
| ACACTGCCGTCATCATGTTT+TGG | 0.317670 | 1.2:-993201 | None:intergenic |
| TCCGAAGACGCCATGGAGTA+TGG | 0.318420 | 1.2:+987875 | MS.gene24165:CDS |
| GGACGTCTTATAAGTACTTT+TGG | 0.334717 | 1.2:-990168 | None:intergenic |
| TGACATTCTCGTTGTTGATA+TGG | 0.336210 | 1.2:+992203 | MS.gene24165:CDS |
| AAGAGCCTGCAAAGCTATAA+AGG | 0.342065 | 1.2:+993434 | MS.gene24165:CDS |
| CATTAGCCATTGAAAGTAGA+AGG | 0.344540 | 1.2:-992167 | None:intergenic |
| TGCATGCAAATGAGTGCATT+TGG | 0.351990 | 1.2:+994500 | MS.gene24165:CDS |
| CCAAAATTACCTGAAGATAT+TGG | 0.358571 | 1.2:-993698 | None:intergenic |
| ATACCGTTTAAAACTAATAA+TGG | 0.361193 | 1.2:-988923 | None:intergenic |
| AGAAGTATCCATTGAAAATT+GGG | 0.361508 | 1.2:+990694 | MS.gene24165:CDS |
| TCCATACTCCATGGCGTCTT+CGG | 0.367629 | 1.2:-987876 | None:intergenic |
| GCATGCAAATGAGTGCATTT+GGG | 0.375049 | 1.2:+994501 | MS.gene24165:CDS |
| AGTCTGGTGCAGCAATAATT+AGG | 0.382222 | 1.2:-993605 | None:intergenic |
| CTGCACCAGACTTGGATACT+TGG | 0.382708 | 1.2:+993616 | MS.gene24165:CDS |
| CTCAAGAAATCATTGACTCT+TGG | 0.389186 | 1.2:+993472 | MS.gene24165:CDS |
| ATCTTCACCAGTGAGGCTTT+GGG | 0.389493 | 1.2:-989307 | None:intergenic |
| GGTGCAGTGGCAGAGCGTTT+AGG | 0.395962 | 1.2:+992243 | MS.gene24165:CDS |
| TATTTATCACCAATATCTTC+AGG | 0.407320 | 1.2:+993689 | MS.gene24165:CDS |
| ATTGTCCCTTCTACTTTCAA+TGG | 0.417484 | 1.2:+992161 | MS.gene24165:CDS |
| AAAGGTCACCTTCGAGCAAC+AGG | 0.421884 | 1.2:-990189 | None:intergenic |
| TATTGGTGATAAATAGCAAA+TGG | 0.425158 | 1.2:-993681 | None:intergenic |
| CGTCAGACAGGAAGGATTCA+TGG | 0.430620 | 1.2:+987847 | MS.gene24165:CDS |
| TTGTGACAACAAGTCAGAAA+TGG | 0.435540 | 1.2:-993157 | None:intergenic |
| TTATTTATTGCAGAATTGTA+AGG | 0.438615 | 1.2:+993130 | MS.gene24165:intron |
| ATTGGTGATAAATAGCAAAT+GGG | 0.443406 | 1.2:-993680 | None:intergenic |
| GCCTGCAAAGCTATAAAGGC+TGG | 0.451952 | 1.2:+993438 | MS.gene24165:CDS |
| AATTATTGCTGCACCAGACT+TGG | 0.465888 | 1.2:+993608 | MS.gene24165:CDS |
| CGCTAGAGCTTGCGTCAGAC+AGG | 0.468973 | 1.2:+987835 | MS.gene24165:CDS |
| TATATGCAGGCAGGGTGCTA+AGG | 0.486648 | 1.2:+989621 | MS.gene24165:intron |
| CTCGTTGTTGATATGGTTGG+TGG | 0.492274 | 1.2:+992210 | MS.gene24165:CDS |
| ATGCATGGGTGAGTTCTTGA+TGG | 0.501143 | 1.2:-994482 | None:intergenic |
| CCGGTGAGTTGAGGGACAAC+CGG | 0.506639 | 1.2:+989262 | MS.gene24165:CDS |
| AATACTGCCCAAAGCCTCAC+TGG | 0.508455 | 1.2:+989300 | MS.gene24165:CDS |
| CTGCCACTGCACCAGTAAGA+AGG | 0.508496 | 1.2:-992233 | None:intergenic |
| TCAACTCACCGGTGAGTTGA+GGG | 0.508876 | 1.2:+989254 | MS.gene24165:CDS |
| AATGTCCAAGTATCCAAGTC+TGG | 0.512151 | 1.2:-993621 | None:intergenic |
| AATGCACTCATTTGCATGCA+TGG | 0.517471 | 1.2:-994497 | None:intergenic |
| TAAGAAAACTTCATTCTCAC+AGG | 0.523266 | 1.2:+989690 | MS.gene24165:CDS |
| GCCATGGAGTATGGAGAGAC+CGG | 0.527277 | 1.2:+987884 | MS.gene24165:CDS |
| TCTTGGACAGGCACCATCCA+TGG | 0.531216 | 1.2:+992548 | MS.gene24165:CDS |
| TCCGGTCTCTCCATACTCCA+TGG | 0.531785 | 1.2:-987885 | None:intergenic |
| GTCAACTCACCGGTGAGTTG+AGG | 0.531835 | 1.2:+989253 | MS.gene24165:CDS |
| ATGCAATTCATATCTTGGAC+AGG | 0.532059 | 1.2:+992536 | MS.gene24165:CDS |
| ATTCTCGTTGTTGATATGGT+TGG | 0.536995 | 1.2:+992207 | MS.gene24165:CDS |
| CTCAGTTATTTGCAATCCGA+TGG | 0.541352 | 1.2:-994240 | None:intergenic |
| AACACTGAAGACATAAAAGA+TGG | 0.541808 | 1.2:+989204 | MS.gene24165:CDS |
| GCTTTGCAGGCTCTTAGAGC+AGG | 0.543207 | 1.2:-993426 | None:intergenic |
| GGGGCAGAGTTTGATAAAAG+TGG | 0.553292 | 1.2:-993660 | None:intergenic |
| AAATATCCTCACAATATCCA+TGG | 0.553785 | 1.2:-992565 | None:intergenic |
| GATTGCAAATAACTGAGCCT+TGG | 0.554849 | 1.2:+994246 | MS.gene24165:CDS |
| AGAAATCATTGACTCTTGGA+AGG | 0.556926 | 1.2:+993476 | MS.gene24165:CDS |
| ATATGCAGGCAGGGTGCTAA+GGG | 0.562125 | 1.2:+989622 | MS.gene24165:intron |
| CTCTAGCGAGTTTACTCGCG+AGG | 0.572749 | 1.2:-987820 | None:intergenic |
| AGTATGGAGAGACCGGAAAG+AGG | 0.576067 | 1.2:+987891 | MS.gene24165:CDS |
| GGCTCTTAGAGCAGGAAATG+TGG | 0.580777 | 1.2:-993418 | None:intergenic |
| CCGGTTGTCCCTCAACTCAC+CGG | 0.583321 | 1.2:-989262 | None:intergenic |
| ACCTGGTATTCGCGTAGCCA+AGG | 0.585659 | 1.2:-994263 | None:intergenic |
| GCCTTGGCTACGCGAATACC+AGG | 0.594448 | 1.2:+994262 | MS.gene24165:CDS |
| TGGCCTTCTTACTGGTGCAG+TGG | 0.596291 | 1.2:+992230 | MS.gene24165:CDS |
| ATGCACTCATTTGCATGCAT+GGG | 0.597902 | 1.2:-994496 | None:intergenic |
| TATTATTGTCGATCAACGAC+CGG | 0.599829 | 1.2:-989281 | None:intergenic |
| ATCCTCACAATATCCATGGA+TGG | 0.603371 | 1.2:-992561 | None:intergenic |
| AGAGCTTGCGTCAGACAGGA+AGG | 0.603465 | 1.2:+987839 | MS.gene24165:CDS |
| TCACAAGACGGTCAACTCAC+CGG | 0.606124 | 1.2:+989243 | MS.gene24165:CDS |
| CATGCAAATGAGTGCATTTG+GGG | 0.609044 | 1.2:+994502 | MS.gene24165:CDS |
| ATTAGCCATTGAAAGTAGAA+GGG | 0.613664 | 1.2:-992166 | None:intergenic |
| CTGATTCAGATTCTTGCGTG+TGG | 0.618711 | 1.2:+992134 | MS.gene24165:intron |
| GAGTTGACCGTCTTGTGACT+CGG | 0.623293 | 1.2:-989238 | None:intergenic |
| CAAAATCCAAAACATGATGA+CGG | 0.624523 | 1.2:+993195 | MS.gene24165:CDS |
| CACCATCCATGGATATTGTG+AGG | 0.625248 | 1.2:+992559 | MS.gene24165:CDS |
| AATGTGTGCATCAGTCAGCA+TGG | 0.631729 | 1.2:+993323 | MS.gene24165:CDS |
| GCAGTGGCAGAGCGTTTAGG+AGG | 0.634206 | 1.2:+992246 | MS.gene24165:CDS |
| CAGCTTGAGAAAATGGCCAT+CGG | 0.636892 | 1.2:+994224 | MS.gene24165:CDS |
| AAGATATAGAAGACATGCGA+AGG | 0.637003 | 1.2:+989325 | MS.gene24165:CDS |
| TTCTTAGCCGAGTCACAAGA+CGG | 0.647000 | 1.2:+989231 | MS.gene24165:CDS |
| TAAGACGTCCTGTTGCTCGA+AGG | 0.647595 | 1.2:+990181 | MS.gene24165:CDS |
| TTGGTGATAAATAGCAAATG+GGG | 0.648921 | 1.2:-993679 | None:intergenic |
| TAAGCGACGAAATCTGCAAG+AGG | 0.655897 | 1.2:+992592 | MS.gene24165:CDS |
| CTTCTATATCTTCACCAGTG+AGG | 0.664706 | 1.2:-989314 | None:intergenic |
| AAAACATGATGACGGCAGTG+TGG | 0.681492 | 1.2:+993203 | MS.gene24165:CDS |
| TTGTGCATGCAAGTTGCTAG+AGG | 0.695261 | 1.2:-994197 | None:intergenic |
| AGTTTGATAAAAGTGGCAAG+AGG | 0.695485 | 1.2:-993653 | None:intergenic |
| GTGTGCATCAGTCAGCATGG+AGG | 0.745962 | 1.2:+993326 | MS.gene24165:CDS |
| ATGCAAATGAGTGCATTTGG+GGG | 0.767185 | 1.2:+994503 | MS.gene24165:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTAAATA+TGG | + | chr1.2:992314-992333 | MS.gene24165:intron | 0.0% |
| !! | CAATAATAACATAAAAATAA+AGG | - | chr1.2:990210-990229 | None:intergenic | 10.0% |
| !! | TTCATAAAAGTAAATAAAAA+GGG | + | chr1.2:994345-994364 | MS.gene24165:intron | 10.0% |
| !!! | TTTTAACTCAAAAAAATAAT+TGG | - | chr1.2:992645-992664 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTTTTTAAATAGA+AGG | - | chr1.2:991192-991211 | None:intergenic | 10.0% |
| !! | CATCAATATTATGAAATTAT+TGG | + | chr1.2:994305-994324 | MS.gene24165:intron | 15.0% |
| !! | GCTATATATATATATATTCA+TGG | - | chr1.2:990787-990806 | None:intergenic | 15.0% |
| !! | GTTCATAAAAGTAAATAAAA+AGG | + | chr1.2:994344-994363 | MS.gene24165:intron | 15.0% |
| !! | TGAATAGTGATTTATTATAA+AGG | + | chr1.2:993739-993758 | MS.gene24165:intron | 15.0% |
| !! | TTAAAATTCTTATACATTCA+AGG | - | chr1.2:990887-990906 | None:intergenic | 15.0% |
| !!! | AAAATTTTCAATACTTCATT+TGG | + | chr1.2:994093-994112 | MS.gene24165:intron | 15.0% |
| !!! | AAGCTTTTATTAAAACAAAT+TGG | - | chr1.2:989026-989045 | None:intergenic | 15.0% |
| !!! | ATACATATTTTATTTGTCTT+TGG | + | chr1.2:990341-990360 | MS.gene24165:intron | 15.0% |
| !!! | ATTCTTGAATTTTGTTTTTT+GGG | + | chr1.2:991892-991911 | MS.gene24165:intron | 15.0% |
| !!! | CTTATTTGTTTTCAATTTTA+AGG | + | chr1.2:988271-988290 | MS.gene24165:intron | 15.0% |
| !!! | GGAAAAAAATTACAATTTTA+CGG | - | chr1.2:991171-991190 | None:intergenic | 15.0% |
| !!! | TATTCTTGAATTTTGTTTTT+TGG | + | chr1.2:991891-991910 | MS.gene24165:intron | 15.0% |
| !!! | TTATTTACTTTTATGAACAA+AGG | - | chr1.2:994342-994361 | None:intergenic | 15.0% |
| !! | AAAGATATTGTAACACAAAA+AGG | - | chr1.2:990571-990590 | None:intergenic | 20.0% |
| !! | AAATCTCTAAACAAATTTGA+GGG | + | chr1.2:990474-990493 | MS.gene24165:intron | 20.0% |
| !! | AAATGTTTATAGGTTTCTAT+CGG | + | chr1.2:992903-992922 | MS.gene24165:intron | 20.0% |
| !! | AAATTCAAGAATAAGTTGTT+TGG | - | chr1.2:991884-991903 | None:intergenic | 20.0% |
| !! | AAGATATTGTAACACAAAAA+GGG | - | chr1.2:990570-990589 | None:intergenic | 20.0% |
| !! | AAGTGCAATTTACATTTAAT+TGG | - | chr1.2:993233-993252 | None:intergenic | 20.0% |
| !! | AATAAGTTGTTTATTCAAAC+AGG | + | chr1.2:988731-988750 | MS.gene24165:intron | 20.0% |
| !! | AATCAAAGAGAAATGTTTAT+AGG | + | chr1.2:992893-992912 | MS.gene24165:intron | 20.0% |
| !! | AATCAAATATGTAGATGATA+TGG | + | chr1.2:990307-990326 | MS.gene24165:intron | 20.0% |
| !! | AATCTCTGATAACTATTTAA+TGG | + | chr1.2:994436-994455 | MS.gene24165:intron | 20.0% |
| !! | AGATCAAACATATAAAAGAT+AGG | + | chr1.2:993908-993927 | MS.gene24165:intron | 20.0% |
| !! | ATAAGTTGTTTATTCAAACA+GGG | + | chr1.2:988732-988751 | MS.gene24165:intron | 20.0% |
| !! | GGGACATTATAATAAAAAAA+GGG | + | chr1.2:991310-991329 | MS.gene24165:intron | 20.0% |
| !! | GGTAAAAGAATAGAAAAATA+TGG | + | chr1.2:987992-988011 | MS.gene24165:intron | 20.0% |
| !! | GTAAAGTTTAAGTATACATA+TGG | - | chr1.2:993995-994014 | None:intergenic | 20.0% |
| !! | TATGTAATTGAAGTTTAGTT+TGG | + | chr1.2:988127-988146 | MS.gene24165:intron | 20.0% |
| !! | TGGCTATTATATTATTGAAT+TGG | + | chr1.2:992050-992069 | MS.gene24165:intron | 20.0% |
| !! | TGGGACATTATAATAAAAAA+AGG | + | chr1.2:991309-991328 | MS.gene24165:intron | 20.0% |
| !! | TGTAATAAATTGTGTCAAAT+TGG | + | chr1.2:988957-988976 | MS.gene24165:intron | 20.0% |
| !! | TGTTATTAACATTACCTAAA+TGG | - | chr1.2:989188-989207 | None:intergenic | 20.0% |
| !! | TGTTTGATCTCTTAAAAATT+TGG | - | chr1.2:993898-993917 | None:intergenic | 20.0% |
| !! | TTATTTATTGCAGAATTGTA+AGG | + | chr1.2:993130-993149 | MS.gene24165:intron | 20.0% |
| !! | TTCTATATGTTTGATATAGA+CGG | + | chr1.2:989451-989470 | MS.gene24165:intron | 20.0% |
| !!! | AAGTATTAAAATAGGTTTTC+TGG | + | chr1.2:991289-991308 | MS.gene24165:intron | 20.0% |
| !!! | AATGGTATATTTTATTTTGC+AGG | + | chr1.2:994454-994473 | MS.gene24165:intron | 20.0% |
| !!! | AGAATTTTAAATTGATACAC+AGG | + | chr1.2:990897-990916 | MS.gene24165:intron | 20.0% |
| !!! | AGGAAAGAAAGTATTAAAAT+AGG | + | chr1.2:991281-991300 | MS.gene24165:intron | 20.0% |
| !!! | AGTATTAAAATAGGTTTTCT+GGG | + | chr1.2:991290-991309 | MS.gene24165:intron | 20.0% |
| !!! | ATACCGTTTAAAACTAATAA+TGG | - | chr1.2:988926-988945 | None:intergenic | 20.0% |
| !!! | ATCTACATATTTGATTTTCA+AGG | - | chr1.2:990303-990322 | None:intergenic | 20.0% |
| !!! | ATGTTTAACAAATTTGTTTG+TGG | + | chr1.2:991574-991593 | MS.gene24165:intron | 20.0% |
| !!! | CTTTTGTTTCTTTTATGTTA+AGG | + | chr1.2:993799-993818 | MS.gene24165:intron | 20.0% |
| !!! | GAAAAATGAAAGCTTTAAAA+AGG | - | chr1.2:992742-992761 | None:intergenic | 20.0% |
| !!! | TGTTAAACATTTTGTTTAAC+AGG | - | chr1.2:991564-991583 | None:intergenic | 20.0% |
| !!! | TGTTTAACAAATTTGTTTGT+GGG | + | chr1.2:991575-991594 | MS.gene24165:intron | 20.0% |
| !!! | TTCATTTTTCAGAAATAGTT+TGG | + | chr1.2:992752-992771 | MS.gene24165:intron | 20.0% |
| !!! | TTCTTGAATTTTGTTTTTTG+GGG | + | chr1.2:991893-991912 | MS.gene24165:intron | 20.0% |
| !!! | TTGCCATTATTAGTTTTAAA+CGG | + | chr1.2:988920-988939 | MS.gene24165:CDS | 20.0% |
| ! | AATGTTTATAGGTTTCTATC+GGG | + | chr1.2:992904-992923 | MS.gene24165:intron | 25.0% |
| ! | AGAATAAGTTGTTTGGATAT+TGG | - | chr1.2:991877-991896 | None:intergenic | 25.0% |
| ! | ATACACTATTCTACAAAAAG+AGG | + | chr1.2:990427-990446 | MS.gene24165:intron | 25.0% |
| ! | ATTAAGCAAAAAACAACACT+CGG | - | chr1.2:991504-991523 | None:intergenic | 25.0% |
| ! | ATTGAAAATATGATCATGCA+CGG | - | chr1.2:993768-993787 | None:intergenic | 25.0% |
| ! | CAAAATCTAAATGACAAACT+TGG | - | chr1.2:992289-992308 | None:intergenic | 25.0% |
| ! | CAAATCTCTAAACAAATTTG+AGG | + | chr1.2:990473-990492 | MS.gene24165:intron | 25.0% |
| ! | CTAACAGAAATAAATGCATA+TGG | - | chr1.2:990732-990751 | None:intergenic | 25.0% |
| ! | GATCAAAAGTTTATTGTTCT+GGG | + | chr1.2:993821-993840 | MS.gene24165:intron | 25.0% |
| ! | GTTATAGCAATAGATAAAAG+AGG | - | chr1.2:988081-988100 | None:intergenic | 25.0% |
| ! | TAAATGCCACCTTAAAAAAA+TGG | + | chr1.2:991810-991829 | MS.gene24165:intron | 25.0% |
| ! | TATAGTCTGAAAAATGTGAA+GGG | + | chr1.2:992004-992023 | MS.gene24165:intron | 25.0% |
| ! | TATTTATCACCAATATCTTC+AGG | + | chr1.2:993689-993708 | MS.gene24165:CDS | 25.0% |
| ! | TCTATATGTTTGATATAGAC+GGG | + | chr1.2:989452-989471 | MS.gene24165:intron | 25.0% |
| ! | TGAAACTGTTATAGAACATT+CGG | - | chr1.2:991123-991142 | None:intergenic | 25.0% |
| ! | TTAACTAAATGATTCATCAG+AGG | - | chr1.2:993016-993035 | None:intergenic | 25.0% |
| ! | TTACTTCAACTTCTTTACAA+GGG | + | chr1.2:989930-989949 | MS.gene24165:intron | 25.0% |
| ! | TTATAGTCTGAAAAATGTGA+AGG | + | chr1.2:992003-992022 | MS.gene24165:intron | 25.0% |
| ! | TTCCATTCTTAACAATCTTT+GGG | + | chr1.2:992416-992435 | MS.gene24165:intron | 25.0% |
| ! | TTTACTTCAACTTCTTTACA+AGG | + | chr1.2:989929-989948 | MS.gene24165:intron | 25.0% |
| ! | TTTCCATTCTTAACAATCTT+TGG | + | chr1.2:992415-992434 | MS.gene24165:intron | 25.0% |
| ! | TTTGTATGCAATTCATATCT+TGG | + | chr1.2:992531-992550 | MS.gene24165:CDS | 25.0% |
| !! | AAAAAAGGGAAGTTGATTTA+TGG | + | chr1.2:991324-991343 | MS.gene24165:intron | 25.0% |
| !! | ATCTAACGTTAATGTTTTAC+AGG | + | chr1.2:992501-992520 | MS.gene24165:intron | 25.0% |
| !! | ATTGGTGATAAATAGCAAAT+GGG | - | chr1.2:993683-993702 | None:intergenic | 25.0% |
| !! | CTTCAATTTTGTATGATGAT+TGG | - | chr1.2:992990-993009 | None:intergenic | 25.0% |
| !! | GTTTAACAAATTTGTTTGTG+GGG | + | chr1.2:991576-991595 | MS.gene24165:intron | 25.0% |
| !! | TATTGGTGATAAATAGCAAA+TGG | - | chr1.2:993684-993703 | None:intergenic | 25.0% |
| !! | TCTATTCTTTTACCTATTAC+CGG | - | chr1.2:987986-988005 | None:intergenic | 25.0% |
| !! | TGTTTGGATTTTCAATGTTT+GGG | + | chr1.2:988304-988323 | MS.gene24165:intron | 25.0% |
| !! | TTAGATTTGAGCTATTCTTT+TGG | + | chr1.2:990748-990767 | MS.gene24165:intron | 25.0% |
| !! | TTGTTTGGATTTTCAATGTT+TGG | + | chr1.2:988303-988322 | MS.gene24165:intron | 25.0% |
| !! | TTTAGAGTGAAGATGTAATT+TGG | + | chr1.2:989752-989771 | MS.gene24165:intron | 25.0% |
| !! | TTTTGCTTTATGACAGAAAT+AGG | + | chr1.2:988661-988680 | MS.gene24165:intron | 25.0% |
| !!! | AAGAAGTATCCATTGAAAAT+TGG | + | chr1.2:990693-990712 | MS.gene24165:CDS | 25.0% |
| !!! | ACATAGTTTTGTGAGATTTT+GGG | + | chr1.2:988352-988371 | MS.gene24165:intron | 25.0% |
| !!! | AGAAGTATCCATTGAAAATT+GGG | + | chr1.2:990694-990713 | MS.gene24165:CDS | 25.0% |
| !!! | ATACACAGGCTTTAAAAAAA+AGG | + | chr1.2:990911-990930 | MS.gene24165:intron | 25.0% |
| !!! | CTCTATTTGATTTGATCTAA+AGG | - | chr1.2:990994-991013 | None:intergenic | 25.0% |
| !!! | GTAGCTTTGGTTATAAATTT+AGG | + | chr1.2:993843-993862 | MS.gene24165:intron | 25.0% |
| !!! | TAGCAGTTTCCATTTTTTTA+AGG | - | chr1.2:991822-991841 | None:intergenic | 25.0% |
| !!! | TATTTTTTCCAGTATATGTG+AGG | + | chr1.2:990662-990681 | MS.gene24165:intron | 25.0% |
| !!! | TGAAGTTTTGTTTCTTTTGT+TGG | + | chr1.2:993089-993108 | MS.gene24165:intron | 25.0% |
| !!! | TTAAGGCATCTTATTTTGTT+TGG | + | chr1.2:988288-988307 | MS.gene24165:intron | 25.0% |
| !!! | TTGAAAACATTGATTTTGTG+TGG | + | chr1.2:991427-991446 | MS.gene24165:intron | 25.0% |
| AAAAAGGGAAAGTGAAATCA+AGG | - | chr1.2:990555-990574 | None:intergenic | 30.0% | |
| AAAAGGGAAAGTGAAATCAA+GGG | - | chr1.2:990554-990573 | None:intergenic | 30.0% | |
| AAATATCCTCACAATATCCA+TGG | - | chr1.2:992568-992587 | None:intergenic | 30.0% | |
| AACACTGAAGACATAAAAGA+TGG | + | chr1.2:989204-989223 | MS.gene24165:CDS | 30.0% | |
| AAGATGCTACATCTTGTATT+TGG | - | chr1.2:990047-990066 | None:intergenic | 30.0% | |
| AATTGAACACTGCTCAAATT+GGG | + | chr1.2:991353-991372 | MS.gene24165:intron | 30.0% | |
| ACATCTTTAATATCCGTATG+TGG | + | chr1.2:990813-990832 | MS.gene24165:intron | 30.0% | |
| ACATGCATTTGAGAAATATG+AGG | + | chr1.2:989052-989071 | MS.gene24165:intron | 30.0% | |
| AGAAAAGAAATGTGAAGCTT+TGG | - | chr1.2:990270-990289 | None:intergenic | 30.0% | |
| AGGTTATCAGTGATTGATTA+CGG | + | chr1.2:989080-989099 | MS.gene24165:intron | 30.0% | |
| AGTGTAGAACATTCCTTATA+AGG | + | chr1.2:989882-989901 | MS.gene24165:intron | 30.0% | |
| ATACCTACTAATTCAACACA+TGG | - | chr1.2:992934-992953 | None:intergenic | 30.0% | |
| ATAGATAAAAGAGGAATGCT+AGG | - | chr1.2:988072-988091 | None:intergenic | 30.0% | |
| ATAGTCTGAAAAATGTGAAG+GGG | + | chr1.2:992005-992024 | MS.gene24165:intron | 30.0% | |
| ATGACGTGTCTCATTATTAT+TGG | + | chr1.2:988015-988034 | MS.gene24165:intron | 30.0% | |
| ATTAGCCATTGAAAGTAGAA+GGG | - | chr1.2:992169-992188 | None:intergenic | 30.0% | |
| CAAAATCCAAAACATGATGA+CGG | + | chr1.2:993195-993214 | MS.gene24165:CDS | 30.0% | |
| CACGACATATGATAAATTGT+TGG | - | chr1.2:993289-993308 | None:intergenic | 30.0% | |
| CATGCATTTGAGAAATATGA+GGG | + | chr1.2:989053-989072 | MS.gene24165:intron | 30.0% | |
| CCAAAATTACCTGAAGATAT+TGG | - | chr1.2:993701-993720 | None:intergenic | 30.0% | |
| CTGTCTAGTTATTATTTCCT+CGG | + | chr1.2:989559-989578 | MS.gene24165:intron | 30.0% | |
| CTTCTGAATTCGTTATTATC+TGG | + | chr1.2:991917-991936 | MS.gene24165:intron | 30.0% | |
| GAAAATGGAATTTCTGATCT+TGG | + | chr1.2:993366-993385 | MS.gene24165:CDS | 30.0% | |
| GACAAGAATAATTAAGTACC+TGG | - | chr1.2:994283-994302 | None:intergenic | 30.0% | |
| GATATAGAGAGTAAACAACT+TGG | - | chr1.2:990077-990096 | None:intergenic | 30.0% | |
| GGATCAAAAGTTTATTGTTC+TGG | + | chr1.2:993820-993839 | MS.gene24165:intron | 30.0% | |
| GTGTAGAACATTCCTTATAA+GGG | + | chr1.2:989883-989902 | MS.gene24165:intron | 30.0% | |
| TAAGAAAACTTCATTCTCAC+AGG | + | chr1.2:989690-989709 | MS.gene24165:CDS | 30.0% | |
| TAGATAAAAGAGGAATGCTA+GGG | - | chr1.2:988071-988090 | None:intergenic | 30.0% | |
| TCAACAACAAAAGTGGAATT+GGG | - | chr1.2:991219-991238 | None:intergenic | 30.0% | |
| TCACATTAACAATGGTAGTA+TGG | - | chr1.2:989504-989523 | None:intergenic | 30.0% | |
| TGAATTCGTTATTATCTGGA+TGG | + | chr1.2:991921-991940 | MS.gene24165:intron | 30.0% | |
| TGCAGAATTCACATTAACAA+TGG | - | chr1.2:989512-989531 | None:intergenic | 30.0% | |
| TGGATATTGGATAAAGTTTG+TGG | - | chr1.2:991864-991883 | None:intergenic | 30.0% | |
| TGTTCTGTATTTGTGTACTT+CGG | + | chr1.2:989428-989447 | MS.gene24165:intron | 30.0% | |
| TTATGCTATTCGATATATGC+AGG | + | chr1.2:989608-989627 | MS.gene24165:intron | 30.0% | |
| TTCAACAACAAAAGTGGAAT+TGG | - | chr1.2:991220-991239 | None:intergenic | 30.0% | |
| TTTCTCTTTCAGTGTATCAA+CGG | - | chr1.2:992712-992731 | None:intergenic | 30.0% | |
| ! | ACAAGATGTAGCATCTTTTA+TGG | + | chr1.2:990050-990069 | MS.gene24165:intron | 30.0% |
| ! | ACATCTTACCCAATTTTCAA+TGG | - | chr1.2:990705-990724 | None:intergenic | 30.0% |
| ! | CCAATATCTTCAGGTAATTT+TGG | + | chr1.2:993698-993717 | MS.gene24165:intron | 30.0% |
| ! | GAACAGAAGCATAATCTATT+TGG | - | chr1.2:994128-994147 | None:intergenic | 30.0% |
| ! | TTGGTGATAAATAGCAAATG+GGG | - | chr1.2:993682-993701 | None:intergenic | 30.0% |
| !!! | CAGTTTCCATTTTTTTAAGG+TGG | - | chr1.2:991819-991838 | None:intergenic | 30.0% |
| !!! | GACATAGTTTTGTGAGATTT+TGG | + | chr1.2:988351-988370 | MS.gene24165:intron | 30.0% |
| !!! | TCCACTTTTGTTGTTGAAAA+AGG | + | chr1.2:991222-991241 | MS.gene24165:intron | 30.0% |
| !!! | TCCTTTTTCAACAACAAAAG+TGG | - | chr1.2:991226-991245 | None:intergenic | 30.0% |
| !!! | TCTGGTTTTTGCTTTGATAA+TGG | + | chr1.2:990368-990387 | MS.gene24165:intron | 30.0% |
| !!! | TGAGGACATCTTATTTTGTT+TGG | + | chr1.2:989348-989367 | MS.gene24165:intron | 30.0% |
| !!! | TGATGCATGCTATTTTATAC+TGG | + | chr1.2:991391-991410 | MS.gene24165:intron | 30.0% |
| AAAACAAGTCTACCTCTTTC+CGG | - | chr1.2:987906-987925 | None:intergenic | 35.0% | |
| AAAATCTACGTGATCATGGT+GGG | + | chr1.2:991760-991779 | MS.gene24165:intron | 35.0% | |
| AAGATATAGAAGACATGCGA+AGG | + | chr1.2:989325-989344 | MS.gene24165:CDS | 35.0% | |
| ACACATCTAATGCCCTTATA+AGG | - | chr1.2:989898-989917 | None:intergenic | 35.0% | |
| ACGGTGATATTGTAAACGAT+GGG | - | chr1.2:991152-991171 | None:intergenic | 35.0% | |
| AGTTACAGAAAAGCAAGATG+TGG | - | chr1.2:989537-989556 | None:intergenic | 35.0% | |
| AGTTTGATAAAAGTGGCAAG+AGG | - | chr1.2:993656-993675 | None:intergenic | 35.0% | |
| ATATGCCACACATGATATAC+AGG | - | chr1.2:991982-992001 | None:intergenic | 35.0% | |
| ATCAGAGATTTGCACAGAAT+TGG | - | chr1.2:994426-994445 | None:intergenic | 35.0% | |
| ATCTCTCATTCGTCAGAAAA+TGG | + | chr1.2:993351-993370 | MS.gene24165:CDS | 35.0% | |
| ATGCAATTCATATCTTGGAC+AGG | + | chr1.2:992536-992555 | MS.gene24165:CDS | 35.0% | |
| ATTATTTCCTCGGTATGCTT+GGG | + | chr1.2:989569-989588 | MS.gene24165:intron | 35.0% | |
| ATTCTCGTTGTTGATATGGT+TGG | + | chr1.2:992207-992226 | MS.gene24165:CDS | 35.0% | |
| ATTGAACACTGCTCAAATTG+GGG | + | chr1.2:991354-991373 | MS.gene24165:intron | 35.0% | |
| ATTGTCCCTTCTACTTTCAA+TGG | + | chr1.2:992161-992180 | MS.gene24165:CDS | 35.0% | |
| CAATCTACAGCTTGAGAAAA+TGG | + | chr1.2:994217-994236 | MS.gene24165:CDS | 35.0% | |
| CACTTCCTTGATCTTCTAAT+CGG | + | chr1.2:993248-993267 | MS.gene24165:intron | 35.0% | |
| CATTAGCCATTGAAAGTAGA+AGG | - | chr1.2:992170-992189 | None:intergenic | 35.0% | |
| CATTTGAGAAATATGAGGGA+GGG | + | chr1.2:989057-989076 | MS.gene24165:intron | 35.0% | |
| CTCAATTGTATAGACAGAAG+AGG | - | chr1.2:989810-989829 | None:intergenic | 35.0% | |
| CTTATCAAATGTTGCGCTAT+TGG | - | chr1.2:989674-989693 | None:intergenic | 35.0% | |
| GAAATAAGCCTCACATATAC+TGG | - | chr1.2:990673-990692 | None:intergenic | 35.0% | |
| GAATTGAACACTGCTCAAAT+TGG | + | chr1.2:991352-991371 | MS.gene24165:intron | 35.0% | |
| GACCCAAAGATTGTTAAGAA+TGG | - | chr1.2:992421-992440 | None:intergenic | 35.0% | |
| GACGATACCAAATAATCGAA+GGG | + | chr1.2:989958-989977 | MS.gene24165:intron | 35.0% | |
| GAGTTAACCCTTCGATTATT+TGG | - | chr1.2:989968-989987 | None:intergenic | 35.0% | |
| GGAAAAAAATCTAGTGGTGA+GGG | - | chr1.2:991036-991055 | None:intergenic | 35.0% | |
| GGATGACAGTTGTATAATGT+CGG | + | chr1.2:991243-991262 | MS.gene24165:intron | 35.0% | |
| GGTCTAGTGATTAATAGTGT+TGG | + | chr1.2:992437-992456 | MS.gene24165:intron | 35.0% | |
| GTCTCATTATTATTGGAGTG+TGG | + | chr1.2:988022-988041 | MS.gene24165:intron | 35.0% | |
| GTTTGGATCACTCTTTGTAT+TGG | + | chr1.2:992769-992788 | MS.gene24165:intron | 35.0% | |
| TAAAATCTACGTGATCATGG+TGG | + | chr1.2:991759-991778 | MS.gene24165:intron | 35.0% | |
| TAACAACCATAAGTCATCGA+GGG | - | chr1.2:990632-990651 | None:intergenic | 35.0% | |
| TACGGTGATATTGTAAACGA+TGG | - | chr1.2:991153-991172 | None:intergenic | 35.0% | |
| TAGAACCGATTAGAAGATCA+AGG | - | chr1.2:993256-993275 | None:intergenic | 35.0% | |
| TATTACTTCCCCATGCTAAA+TGG | - | chr1.2:990939-990958 | None:intergenic | 35.0% | |
| TATTATTGTCGATCAACGAC+CGG | - | chr1.2:989284-989303 | None:intergenic | 35.0% | |
| TATTATTTCCTCGGTATGCT+TGG | + | chr1.2:989568-989587 | MS.gene24165:intron | 35.0% | |
| TGACATTCTCGTTGTTGATA+TGG | + | chr1.2:992203-992222 | MS.gene24165:CDS | 35.0% | |
| TGACGATACCAAATAATCGA+AGG | + | chr1.2:989957-989976 | MS.gene24165:intron | 35.0% | |
| TGTCTCGAGATTCAATGAAA+AGG | + | chr1.2:989388-989407 | MS.gene24165:intron | 35.0% | |
| TGTGTGGGAAAAAAATCTAG+TGG | - | chr1.2:991042-991061 | None:intergenic | 35.0% | |
| TGTGTTCTCTATTGACCTAA+TGG | + | chr1.2:991734-991753 | MS.gene24165:intron | 35.0% | |
| TTGCCATGTGTTGAATTAGT+AGG | + | chr1.2:992928-992947 | MS.gene24165:intron | 35.0% | |
| TTGTGACAACAAGTCAGAAA+TGG | - | chr1.2:993160-993179 | None:intergenic | 35.0% | |
| TTTAACTATCATGTACTCCC+TGG | + | chr1.2:994035-994054 | MS.gene24165:intron | 35.0% | |
| ! | AAATTTGTTTGTGGGGTGAA+AGG | + | chr1.2:991583-991602 | MS.gene24165:intron | 35.0% |
| ! | ATTGACTCTTGGAAGGAAAA+TGG | + | chr1.2:993483-993502 | MS.gene24165:CDS | 35.0% |
| ! | CACGTAGATTTTAGACCATT+AGG | - | chr1.2:991752-991771 | None:intergenic | 35.0% |
| ! | CTTCACATTTCTTTTCTCTG+AGG | + | chr1.2:990273-990292 | MS.gene24165:intron | 35.0% |
| ! | GATTTGAGCTATTCTTTTGG+AGG | + | chr1.2:990751-990770 | MS.gene24165:intron | 35.0% |
| ! | GCTGATTTCATAAGCTATCT+TGG | - | chr1.2:988610-988629 | None:intergenic | 35.0% |
| ! | GGAAGGAAAATGGTTTTTCT+AGG | + | chr1.2:993493-993512 | MS.gene24165:CDS | 35.0% |
| ! | GGACGTCTTATAAGTACTTT+TGG | - | chr1.2:990171-990190 | None:intergenic | 35.0% |
| ! | GTCTAAAATCTACGTGATCA+TGG | + | chr1.2:991756-991775 | MS.gene24165:intron | 35.0% |
| ! | TATTCTACAAAAAGAGGTGC+AGG | + | chr1.2:990433-990452 | MS.gene24165:intron | 35.0% |
| ! | TGCATCTAGAGCTATTCATT+TGG | - | chr1.2:992837-992856 | None:intergenic | 35.0% |
| ! | TTTAAGGTGGCATTTAGCAT+GGG | - | chr1.2:991806-991825 | None:intergenic | 35.0% |
| ! | TTTATTGTTCTGGGTAGCTT+TGG | + | chr1.2:993830-993849 | MS.gene24165:intron | 35.0% |
| !! | AAAAAAGGTGCCATTTAGCA+TGG | + | chr1.2:990926-990945 | MS.gene24165:intron | 35.0% |
| !! | AAAAAGGTGCCATTTAGCAT+GGG | + | chr1.2:990927-990946 | MS.gene24165:intron | 35.0% |
| !! | AGAAATCATTGACTCTTGGA+AGG | + | chr1.2:993476-993495 | MS.gene24165:CDS | 35.0% |
| !! | CTCAAGAAATCATTGACTCT+TGG | + | chr1.2:993472-993491 | MS.gene24165:CDS | 35.0% |
| !! | TTATTTGTCTTTGGAGCATC+TGG | + | chr1.2:990350-990369 | MS.gene24165:intron | 35.0% |
| !!! | AGTGTTGGTTTTCATAGTTC+AGG | + | chr1.2:992452-992471 | MS.gene24165:intron | 35.0% |
| !!! | GTGTGGAAATTGCTGATTTT+AGG | + | chr1.2:991444-991463 | MS.gene24165:intron | 35.0% |
| !!! | GTTCACTTTTTGTTGCGTTT+TGG | + | chr1.2:991955-991974 | MS.gene24165:intron | 35.0% |
| !!! | TCTTTTTTCTGCACCACATA+CGG | - | chr1.2:990829-990848 | None:intergenic | 35.0% |
| !!! | TTTTAAGGTGGCATTTAGCA+TGG | - | chr1.2:991807-991826 | None:intergenic | 35.0% |
| AAATCTACGTGATCATGGTG+GGG | + | chr1.2:991761-991780 | MS.gene24165:intron | 40.0% | |
| AACAACCATAAGTCATCGAG+GGG | - | chr1.2:990631-990650 | None:intergenic | 40.0% | |
| AAGAGCCTGCAAAGCTATAA+AGG | + | chr1.2:993434-993453 | MS.gene24165:CDS | 40.0% | |
| AATGAACTATCGTAACCCCT+TGG | + | chr1.2:988987-989006 | MS.gene24165:intron | 40.0% | |
| AATGCACTCATTTGCATGCA+TGG | - | chr1.2:994500-994519 | None:intergenic | 40.0% | |
| AATGTCCAAGTATCCAAGTC+TGG | - | chr1.2:993624-993643 | None:intergenic | 40.0% | |
| AATTATTGCTGCACCAGACT+TGG | + | chr1.2:993608-993627 | MS.gene24165:CDS | 40.0% | |
| AGTCTGGTGCAGCAATAATT+AGG | - | chr1.2:993608-993627 | None:intergenic | 40.0% | |
| ATCCTCACAATATCCATGGA+TGG | - | chr1.2:992564-992583 | None:intergenic | 40.0% | |
| ATCTTGTATTTGGATCCCTG+AGG | - | chr1.2:990037-990056 | None:intergenic | 40.0% | |
| ATGCAAATGAGTGCATTTGG+GGG | + | chr1.2:994503-994522 | MS.gene24165:CDS | 40.0% | |
| ATGCACTCATTTGCATGCAT+GGG | - | chr1.2:994499-994518 | None:intergenic | 40.0% | |
| CAATCCAAACAGACTGTATG+TGG | - | chr1.2:988155-988174 | None:intergenic | 40.0% | |
| CAGGAGCTAATACATGCATT+AGG | + | chr1.2:992471-992490 | MS.gene24165:intron | 40.0% | |
| CATGCAAATGAGTGCATTTG+GGG | + | chr1.2:994502-994521 | MS.gene24165:CDS | 40.0% | |
| CTATTCGATATATGCAGGCA+GGG | + | chr1.2:989613-989632 | MS.gene24165:intron | 40.0% | |
| CTCAGTTATTTGCAATCCGA+TGG | - | chr1.2:994243-994262 | None:intergenic | 40.0% | |
| CTTCTATATCTTCACCAGTG+AGG | - | chr1.2:989317-989336 | None:intergenic | 40.0% | |
| GAAGCTACAGTTAGAGTCAA+TGG | + | chr1.2:991616-991635 | MS.gene24165:intron | 40.0% | |
| GAAGGGTTAACTCTTTAGCA+AGG | + | chr1.2:989975-989994 | MS.gene24165:intron | 40.0% | |
| GATTGCAAATAACTGAGCCT+TGG | + | chr1.2:994246-994265 | MS.gene24165:CDS | 40.0% | |
| GCATGCAAATGAGTGCATTT+GGG | + | chr1.2:994501-994520 | MS.gene24165:CDS | 40.0% | |
| GCATTTGAGAAATATGAGGG+AGG | + | chr1.2:989056-989075 | MS.gene24165:intron | 40.0% | |
| GGGAAAAAAATCTAGTGGTG+AGG | - | chr1.2:991037-991056 | None:intergenic | 40.0% | |
| GTAACAACCATAAGTCATCG+AGG | - | chr1.2:990633-990652 | None:intergenic | 40.0% | |
| TAAAACCTACTTGACCATGG+CGG | - | chr1.2:990969-990988 | None:intergenic | 40.0% | |
| TCTTGTATTTGGATCCCTGA+GGG | - | chr1.2:990036-990055 | None:intergenic | 40.0% | |
| TGACTCTAACTGTAGCTTCT+CGG | - | chr1.2:991615-991634 | None:intergenic | 40.0% | |
| TGCATGCAAATGAGTGCATT+TGG | + | chr1.2:994500-994519 | MS.gene24165:CDS | 40.0% | |
| TGTAGAGCATGTGTAGGTTT+GGG | + | chr1.2:994062-994081 | MS.gene24165:intron | 40.0% | |
| TGTCTATACAATTGAGCTCC+AGG | + | chr1.2:989814-989833 | MS.gene24165:intron | 40.0% | |
| TTGGACCTGTATATCATGTG+TGG | + | chr1.2:991974-991993 | MS.gene24165:intron | 40.0% | |
| TTGTAGAGCATGTGTAGGTT+TGG | + | chr1.2:994061-994080 | MS.gene24165:intron | 40.0% | |
| ! | ACTGCTCAAATTGGGGTTTT+AGG | + | chr1.2:991361-991380 | MS.gene24165:intron | 40.0% |
| ! | CGTTAATGTTTTACAGGCAC+TGG | + | chr1.2:992507-992526 | MS.gene24165:intron | 40.0% |
| ! | CTGCTCAAATTGGGGTTTTA+GGG | + | chr1.2:991362-991381 | MS.gene24165:intron | 40.0% |
| ! | GATCACTCTTTGTATTGGCA+TGG | + | chr1.2:992774-992793 | MS.gene24165:intron | 40.0% |
| ! | TACATCTCGATCTGCCATTT+AGG | + | chr1.2:989171-989190 | MS.gene24165:intron | 40.0% |
| !! | AAAAGGTGCCATTTAGCATG+GGG | + | chr1.2:990928-990947 | MS.gene24165:intron | 40.0% |
| AAAACCTACTTGACCATGGC+GGG | - | chr1.2:990968-990987 | None:intergenic | 45.0% | |
| AATGTGTGCATCAGTCAGCA+TGG | + | chr1.2:993323-993342 | MS.gene24165:CDS | 45.0% | |
| ACACATGCTCTACAATCTCC+AGG | - | chr1.2:994056-994075 | None:intergenic | 45.0% | |
| ACTATCACCAAATGCCGGAA+GGG | - | chr1.2:989857-989876 | None:intergenic | 45.0% | |
| AGTAATAAACTTCCCCGCCA+TGG | + | chr1.2:990952-990971 | MS.gene24165:intron | 45.0% | |
| AGTATCCCCTCGATGACTTA+TGG | + | chr1.2:990623-990642 | MS.gene24165:intron | 45.0% | |
| ATAATGTCGGCAAAGCGTGT+GGG | + | chr1.2:991256-991275 | MS.gene24165:intron | 45.0% | |
| ATAGAAGACATGCGAAGGTG+AGG | + | chr1.2:989330-989349 | MS.gene24165:intron | 45.0% | |
| ATCTTCACCAGTGAGGCTTT+GGG | - | chr1.2:989310-989329 | None:intergenic | 45.0% | |
| ATGCATGGGTGAGTTCTTGA+TGG | - | chr1.2:994485-994504 | None:intergenic | 45.0% | |
| CACATGCTCTACAATCTCCA+GGG | - | chr1.2:994055-994074 | None:intergenic | 45.0% | |
| CACCATCCATGGATATTGTG+AGG | + | chr1.2:992559-992578 | MS.gene24165:CDS | 45.0% | |
| CAGCTTGAGAAAATGGCCAT+CGG | + | chr1.2:994224-994243 | MS.gene24165:CDS | 45.0% | |
| CTCGTTGTTGATATGGTTGG+TGG | + | chr1.2:992210-992229 | MS.gene24165:CDS | 45.0% | |
| CTGATTCAGATTCTTGCGTG+TGG | + | chr1.2:992134-992153 | MS.gene24165:intron | 45.0% | |
| GAAGCTCACTATATCTGTGC+AGG | + | chr1.2:990110-990129 | MS.gene24165:intron | 45.0% | |
| GCCTAAAACCTACTTGACCA+TGG | - | chr1.2:990972-990991 | None:intergenic | 45.0% | |
| GCTATTCGATATATGCAGGC+AGG | + | chr1.2:989612-989631 | MS.gene24165:intron | 45.0% | |
| GGAGATTGTAGAGCATGTGT+AGG | + | chr1.2:994056-994075 | MS.gene24165:intron | 45.0% | |
| GGGGCAGAGTTTGATAAAAG+TGG | - | chr1.2:993663-993682 | None:intergenic | 45.0% | |
| GGGTTAACTCTTTAGCAAGG+TGG | + | chr1.2:989978-989997 | MS.gene24165:intron | 45.0% | |
| GGTACCACATACAGTCTGTT+TGG | + | chr1.2:988148-988167 | MS.gene24165:intron | 45.0% | |
| TAAGCGACGAAATCTGCAAG+AGG | + | chr1.2:992592-992611 | MS.gene24165:CDS | 45.0% | |
| TACTCTCTCTCTAACCAGCA+CGG | + | chr1.2:989148-989167 | MS.gene24165:intron | 45.0% | |
| TATAATGTCGGCAAAGCGTG+TGG | + | chr1.2:991255-991274 | MS.gene24165:intron | 45.0% | |
| TATCTTCACCAGTGAGGCTT+TGG | - | chr1.2:989311-989330 | None:intergenic | 45.0% | |
| TGCTAACAAGTCTACCCTTC+CGG | + | chr1.2:989840-989859 | MS.gene24165:intron | 45.0% | |
| TGGTTTATGAGAAAACGCCG+AGG | + | chr1.2:991636-991655 | MS.gene24165:intron | 45.0% | |
| TGTGTAGACAGAAACCCTCA+GGG | + | chr1.2:990019-990038 | MS.gene24165:intron | 45.0% | |
| TTATGAGAAAACGCCGAGGT+GGG | + | chr1.2:991640-991659 | MS.gene24165:intron | 45.0% | |
| TTCTTAGCCGAGTCACAAGA+CGG | + | chr1.2:989231-989250 | MS.gene24165:CDS | 45.0% | |
| TTGAGAAATATGAGGGAGGG+AGG | + | chr1.2:989060-989079 | MS.gene24165:intron | 45.0% | |
| TTGGGGGTTACATTCTCAGT+GGG | + | chr1.2:994519-994538 | MS.gene24165:CDS | 45.0% | |
| TTGTGCATGCAAGTTGCTAG+AGG | - | chr1.2:994200-994219 | None:intergenic | 45.0% | |
| TTGTGTAGACAGAAACCCTC+AGG | + | chr1.2:990018-990037 | MS.gene24165:intron | 45.0% | |
| TTTAGCAAGGTGGCAACTCT+GGG | + | chr1.2:989988-990007 | MS.gene24165:intron | 45.0% | |
| TTTATGAGAAAACGCCGAGG+TGG | + | chr1.2:991639-991658 | MS.gene24165:intron | 45.0% | |
| TTTGGGGGTTACATTCTCAG+TGG | + | chr1.2:994518-994537 | MS.gene24165:CDS | 45.0% | |
| ! | ACACTGCCGTCATCATGTTT+TGG | - | chr1.2:993204-993223 | None:intergenic | 45.0% |
| ! | AGAGTAAAAGCGAAGAGTGC+AGG | - | chr1.2:989134-989153 | None:intergenic | 45.0% |
| ! | AGTGTGGCAAAGAGTGTGTA+GGG | + | chr1.2:988038-988057 | MS.gene24165:intron | 45.0% |
| ! | GCCATGGTCAAGTAGGTTTT+AGG | + | chr1.2:990968-990987 | MS.gene24165:intron | 45.0% |
| ! | TCCAGCCTTTATAGCTTTGC+AGG | - | chr1.2:993442-993461 | None:intergenic | 45.0% |
| ! | TTACCTATTACCGGTTGCAC+AGG | - | chr1.2:987977-987996 | None:intergenic | 45.0% |
| !! | AAAACATGATGACGGCAGTG+TGG | + | chr1.2:993203-993222 | MS.gene24165:CDS | 45.0% |
| !! | AATGGTGGTGGAAGATGTGT+GGG | - | chr1.2:991057-991076 | None:intergenic | 45.0% |
| !! | GTAGACTTGTTAGCAAGTCC+TGG | - | chr1.2:989835-989854 | None:intergenic | 45.0% |
| !! | TGGACTAGTTGCTTTGCCAA+GGG | - | chr1.2:989006-989025 | None:intergenic | 45.0% |
| !! | TTGGACTAGTTGCTTTGCCA+AGG | - | chr1.2:989007-989026 | None:intergenic | 45.0% |
| AAACCTACTTGACCATGGCG+GGG | - | chr1.2:990967-990986 | None:intergenic | 50.0% | |
| AAAGGTCACCTTCGAGCAAC+AGG | - | chr1.2:990192-990211 | None:intergenic | 50.0% | |
| AAGTCTACCCTTCCGGCATT+TGG | + | chr1.2:989847-989866 | MS.gene24165:intron | 50.0% | |
| AATACTGCCCAAAGCCTCAC+TGG | + | chr1.2:989300-989319 | MS.gene24165:CDS | 50.0% | |
| ACTGAATCCCAAGCATACCG+AGG | - | chr1.2:989579-989598 | None:intergenic | 50.0% | |
| AGTATGGAGAGACCGGAAAG+AGG | + | chr1.2:987891-987910 | MS.gene24165:CDS | 50.0% | |
| CAACCTGTGCAACCGGTAAT+AGG | + | chr1.2:987971-987990 | MS.gene24165:intron | 50.0% | |
| CACTATCACCAAATGCCGGA+AGG | - | chr1.2:989858-989877 | None:intergenic | 50.0% | |
| CCTTCTTTCAGAACACGGGT+GGG | - | chr1.2:991084-991103 | None:intergenic | 50.0% | |
| CGCTCACTATCACCAAATGC+CGG | - | chr1.2:989862-989881 | None:intergenic | 50.0% | |
| CGTCAGACAGGAAGGATTCA+TGG | + | chr1.2:987847-987866 | MS.gene24165:CDS | 50.0% | |
| CGTCCCTTCTTTCAGAACAC+GGG | - | chr1.2:991088-991107 | None:intergenic | 50.0% | |
| CTGCACCAGACTTGGATACT+TGG | + | chr1.2:993616-993635 | MS.gene24165:CDS | 50.0% | |
| CTTCTTTCAGAACACGGGTG+GGG | - | chr1.2:991083-991102 | None:intergenic | 50.0% | |
| CTTTAGCAAGGTGGCAACTC+TGG | + | chr1.2:989987-990006 | MS.gene24165:intron | 50.0% | |
| GAGTTGACCGTCTTGTGACT+CGG | - | chr1.2:989241-989260 | None:intergenic | 50.0% | |
| GCCTGCAAAGCTATAAAGGC+TGG | + | chr1.2:993438-993457 | MS.gene24165:CDS | 50.0% | |
| GCGTCCCTTCTTTCAGAACA+CGG | - | chr1.2:991089-991108 | None:intergenic | 50.0% | |
| GGAAAAATCCGAAGACGCCA+TGG | + | chr1.2:987868-987887 | MS.gene24165:CDS | 50.0% | |
| GGCTCTTAGAGCAGGAAATG+TGG | - | chr1.2:993421-993440 | None:intergenic | 50.0% | |
| TAAGACGTCCTGTTGCTCGA+AGG | + | chr1.2:990181-990200 | MS.gene24165:CDS | 50.0% | |
| TATGAGAAAACGCCGAGGTG+GGG | + | chr1.2:991641-991660 | MS.gene24165:intron | 50.0% | |
| TCACAAGACGGTCAACTCAC+CGG | + | chr1.2:989243-989262 | MS.gene24165:CDS | 50.0% | |
| TCCATACTCCATGGCGTCTT+CGG | - | chr1.2:987879-987898 | None:intergenic | 50.0% | |
| TCCATAGCAACCTGTGCAAC+CGG | + | chr1.2:987964-987983 | MS.gene24165:intron | 50.0% | |
| TTAGCAAGGTGGCAACTCTG+GGG | + | chr1.2:989989-990008 | MS.gene24165:intron | 50.0% | |
| TTCTTTCAGAACACGGGTGG+GGG | - | chr1.2:991082-991101 | None:intergenic | 50.0% | |
| ! | ATATGCAGGCAGGGTGCTAA+GGG | + | chr1.2:989622-989641 | MS.gene24165:intron | 50.0% |
| ! | GAGTGTGGCAAAGAGTGTGT+AGG | + | chr1.2:988037-988056 | MS.gene24165:intron | 50.0% |
| ! | TACGTGATCATGGTGGGGAA+GGG | + | chr1.2:991766-991785 | MS.gene24165:intron | 50.0% |
| ! | TATATGCAGGCAGGGTGCTA+AGG | + | chr1.2:989621-989640 | MS.gene24165:intron | 50.0% |
| ! | TCAACTCACCGGTGAGTTGA+GGG | + | chr1.2:989254-989273 | MS.gene24165:CDS | 50.0% |
| !! | ATGGTTGGTGGCCTTCTTAC+TGG | + | chr1.2:992222-992241 | MS.gene24165:CDS | 50.0% |
| !! | CCACCCGTGTTCTGAAAGAA+GGG | + | chr1.2:991082-991101 | MS.gene24165:intron | 50.0% |
| !! | GAATGGTGGTGGAAGATGTG+TGG | - | chr1.2:991058-991077 | None:intergenic | 50.0% |
| !! | GGACTAGTTGCTTTGCCAAG+GGG | - | chr1.2:989005-989024 | None:intergenic | 50.0% |
| ACCGGTTGCACAGGTTGCTA+TGG | - | chr1.2:987968-987987 | None:intergenic | 55.0% | |
| ACCTGGTATTCGCGTAGCCA+AGG | - | chr1.2:994266-994285 | None:intergenic | 55.0% | |
| AGAGCTTGCGTCAGACAGGA+AGG | + | chr1.2:987839-987858 | MS.gene24165:CDS | 55.0% | |
| ATGAGAAAACGCCGAGGTGG+GGG | + | chr1.2:991642-991661 | MS.gene24165:intron | 55.0% | |
| CAGATCGAGATGTACCGTGC+TGG | - | chr1.2:989165-989184 | None:intergenic | 55.0% | |
| CCCTTCTTTCAGAACACGGG+TGG | - | chr1.2:991085-991104 | None:intergenic | 55.0% | |
| CTCTAGCGAGTTTACTCGCG+AGG | - | chr1.2:987823-987842 | None:intergenic | 55.0% | |
| CTGCCACTGCACCAGTAAGA+AGG | - | chr1.2:992236-992255 | None:intergenic | 55.0% | |
| GCCATGGAGTATGGAGAGAC+CGG | + | chr1.2:987884-987903 | MS.gene24165:CDS | 55.0% | |
| GCTTTGCAGGCTCTTAGAGC+AGG | - | chr1.2:993429-993448 | None:intergenic | 55.0% | |
| GGAGAATGTAGGGTGGATGG+TGG | + | chr1.2:991663-991682 | MS.gene24165:intron | 55.0% | |
| GTCAACTCACCGGTGAGTTG+AGG | + | chr1.2:989253-989272 | MS.gene24165:CDS | 55.0% | |
| GTGTGCATCAGTCAGCATGG+AGG | + | chr1.2:993326-993345 | MS.gene24165:CDS | 55.0% | |
| TCCGAAGACGCCATGGAGTA+TGG | + | chr1.2:987875-987894 | MS.gene24165:CDS | 55.0% | |
| TCCGGTCTCTCCATACTCCA+TGG | - | chr1.2:987888-987907 | None:intergenic | 55.0% | |
| TCTTGGACAGGCACCATCCA+TGG | + | chr1.2:992548-992567 | MS.gene24165:CDS | 55.0% | |
| TGGCCTTCTTACTGGTGCAG+TGG | + | chr1.2:992230-992249 | MS.gene24165:CDS | 55.0% | |
| ! | CTACGTGATCATGGTGGGGA+AGG | + | chr1.2:991765-991784 | MS.gene24165:intron | 55.0% |
| !! | CCCACCCGTGTTCTGAAAGA+AGG | + | chr1.2:991081-991100 | MS.gene24165:intron | 55.0% |
| AGAACACGGGTGGGGGAGAA+TGG | - | chr1.2:991075-991094 | None:intergenic | 60.0% | |
| AGGTGGGGGAGAATGTAGGG+TGG | + | chr1.2:991656-991675 | MS.gene24165:intron | 60.0% | |
| CCCTACATTCTCCCCCACCT+CGG | - | chr1.2:991656-991675 | None:intergenic | 60.0% | |
| CCGAGGTGGGGGAGAATGTA+GGG | + | chr1.2:991653-991672 | MS.gene24165:intron | 60.0% | |
| CCGGTTGTCCCTCAACTCAC+CGG | - | chr1.2:989265-989284 | None:intergenic | 60.0% | |
| CGCTAGAGCTTGCGTCAGAC+AGG | + | chr1.2:987835-987854 | MS.gene24165:CDS | 60.0% | |
| CTTCCCCGCCATGGTCAAGT+AGG | + | chr1.2:990961-990980 | MS.gene24165:intron | 60.0% | |
| GCCTTGGCTACGCGAATACC+AGG | + | chr1.2:994262-994281 | MS.gene24165:CDS | 60.0% | |
| GGGGGAGAATGTAGGGTGGA+TGG | + | chr1.2:991660-991679 | MS.gene24165:intron | 60.0% | |
| GTCGGCAAAGCGTGTGGGTA+AGG | + | chr1.2:991261-991280 | MS.gene24165:intron | 60.0% | |
| TGTGCGTGTGTGTGCGTGTG+TGG | + | chr1.2:992030-992049 | MS.gene24165:intron | 60.0% | |
| ! | CCGGTGAGTTGAGGGACAAC+CGG | + | chr1.2:989262-989281 | MS.gene24165:CDS | 60.0% |
| ! | GCAGTGGCAGAGCGTTTAGG+AGG | + | chr1.2:992246-992265 | MS.gene24165:CDS | 60.0% |
| ! | GGTGCAGTGGCAGAGCGTTT+AGG | + | chr1.2:992243-992262 | MS.gene24165:CDS | 60.0% |
| ACACGGGTGGGGGAGAATGG+TGG | - | chr1.2:991072-991091 | None:intergenic | 65.0% | |
| GCCGAGGTGGGGGAGAATGT+AGG | + | chr1.2:991652-991671 | MS.gene24165:intron | 65.0% | |
| CGGGTGGGGGAGAATGGTGG+TGG | - | chr1.2:991069-991088 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 987806 | 994562 | 987806 | ID=MS.gene24165 |
| chr1.2 | mRNA | 987806 | 994562 | 987806 | ID=MS.gene24165.t1;Parent=MS.gene24165 |
| chr1.2 | exon | 987806 | 987912 | 987806 | ID=MS.gene24165.t1.exon1;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 987806 | 987912 | 987806 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 988901 | 988941 | 988901 | ID=MS.gene24165.t1.exon2;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 988901 | 988941 | 988901 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 989193 | 989346 | 989193 | ID=MS.gene24165.t1.exon3;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 989193 | 989346 | 989193 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 989630 | 989711 | 989630 | ID=MS.gene24165.t1.exon4;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 989630 | 989711 | 989630 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 990132 | 990202 | 990132 | ID=MS.gene24165.t1.exon5;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 990132 | 990202 | 990132 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 990674 | 990715 | 990674 | ID=MS.gene24165.t1.exon6;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 990674 | 990715 | 990674 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 992143 | 992267 | 992143 | ID=MS.gene24165.t1.exon7;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 992143 | 992267 | 992143 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 992523 | 992613 | 992523 | ID=MS.gene24165.t1.exon8;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 992523 | 992613 | 992523 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 993143 | 993239 | 993143 | ID=MS.gene24165.t1.exon9;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 993143 | 993239 | 993143 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 993318 | 993514 | 993318 | ID=MS.gene24165.t1.exon10;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 993318 | 993514 | 993318 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 993605 | 993710 | 993605 | ID=MS.gene24165.t1.exon11;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 993605 | 993710 | 993605 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 994197 | 994283 | 994197 | ID=MS.gene24165.t1.exon12;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 994197 | 994283 | 994197 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| chr1.2 | exon | 994476 | 994562 | 994476 | ID=MS.gene24165.t1.exon13;Parent=MS.gene24165.t1 |
| chr1.2 | CDS | 994476 | 994562 | 994476 | ID=cds.MS.gene24165.t1;Parent=MS.gene24165.t1 |
| Gene Sequence |
| Protein sequence |
